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Shalu K, Thomas L, Ramvilas G, Shabeena KS, Philip S, Sureshkumar S, Raghavan R, Ranjeet K. DNA barcodes for the pipefish genus Corythoichthys (Actinopterygii: Syngnathiformes) from the Indian Ocean provide insights into cryptic diversity. JOURNAL OF FISH BIOLOGY 2023; 102:680-688. [PMID: 36602224 DOI: 10.1111/jfb.15300] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 09/14/2022] [Accepted: 01/02/2023] [Indexed: 06/17/2023]
Abstract
The syngnathiform genus Corythoichthys comprises a group of taxonomically complex, tail-brooding (Syngnathinae) pipefishes widely distributed in the Indo-Pacific region. Due to the presence of overlapping interspecific morphological characters, reliable taxonomic information on Corythoichthys is still lacking. Using 52 CO1 sequences, including seven newly generated, a phylogenetic analysis was carried out to understand the genetic diversity, distribution and 'species groups' within the genus Corythoichthys. Species delimitation using Automatic Barcode Gap Discovery (ABGD) analysis confirmed the presence of 13 species which include 'species-complexes' previously considered as a single taxon. Our results revealed the presence of three species groups, 'C. amplexus', 'C. conspicillatus' and 'C. haematopterus' and four unidentified/undescribed species in the wider Indo-Pacific realm. Interestingly, 60 sequences and a mitogenome identified as Corythoichthys in GenBank are misidentified at the genus level. Based on our findings, we suggest that the taxonomy and systematics of Corythoichthys need to be re-examined and validated using integrative methods, and care should be taken while selecting specimens for genetic studies.
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Affiliation(s)
- Kannan Shalu
- Faculty of Ocean Science and Technology, Kerala University of Fisheries and Ocean Studies, Kochi, India
| | - Liju Thomas
- Faculty of Ocean Science and Technology, Kerala University of Fisheries and Ocean Studies, Kochi, India
| | - Ghosh Ramvilas
- Faculty of Ocean Science and Technology, Kerala University of Fisheries and Ocean Studies, Kochi, India
| | | | - Siby Philip
- Department of Zoology, Nirmalagiri College, Kannur, India
| | - Sivanpillai Sureshkumar
- Faculty of Ocean Science and Technology, Kerala University of Fisheries and Ocean Studies, Kochi, India
| | - Rajeev Raghavan
- Department of Fisheries Resource Management, Kerala University of Fisheries and Ocean Studies, Kochi, India
| | - Kutty Ranjeet
- Department of Aquatic Environment Management, Kerala University of Fisheries and Ocean Studies, Kochi, India
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Interspecific Mating Behavior Between Introduced Zacco platypus and Native Opsariichthys evolans in Taiwan. Zool Stud 2020; 59:e6. [PMID: 32760452 DOI: 10.6620/zs.2020.59-6] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/09/2018] [Accepted: 01/22/2020] [Indexed: 11/18/2022]
Abstract
Introduced freshwater fishes considerably influence the ecology and populations of native species. Previous research has revealed that introduced Zacco platypus may hybridize with chubs that are sister but distinct genera. However, we have little knowledge of Z. platypus' mate choice or its impact on Taiwanese chubs. Therefore, this study identified the interspecific mating behavior between introduced Z. platypus and native Opsariichthys evolans and evaluated the former's invasive impact on cohabitants. Our observations showed that interspecific mating pairs do occur between Z. platypus male(s) and O. evolans female(s). Fifty-three percent of spawning events were interspecific mating and only 43% were between native O. evolans mating pairs. This study showed that Z. platypus male satellites might prefer to engage with Z. platypus, while O. evolans might engage by chance. However, introduced males of Z. platypus may be unable to recognize conspecific females. Meanwhile, introduced females of Z. platypus also have a mate choice preference for males of Z. platypus. Therefore, Z. platypus male hybridization might significantly reduce the successful mating ratio of O. evolans, leading to a dramatic reduction in native O. evolans offspring in the future.
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Moser FN, Wilson AB. Reproductive isolation following hybrid speciation in Mediterranean pipefish (Syngnathus spp.). Anim Behav 2020. [DOI: 10.1016/j.anbehav.2020.01.006] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/25/2022]
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Garcia E, Rice CA, Eernisse DJ, Forsgren KL, Quimbayo JP, Rouse GW. Systematic relationships of sympatric pipefishes (Syngnathus spp.): A mismatch between morphological and molecular variation. JOURNAL OF FISH BIOLOGY 2019; 95:999-1012. [PMID: 31192446 DOI: 10.1111/jfb.14073] [Citation(s) in RCA: 5] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 08/29/2018] [Accepted: 05/31/2019] [Indexed: 06/09/2023]
Abstract
Analyses of mitochondrial DNA and morphological variation were performed on specimens of all five currently recognised Syngnathus pipefish species from the eastern Pacific Ocean with type localities currently considered to lie within the Californian marine biogeographic province: kelp pipefish Syngnathus californiensis, bay pipefish S. leptorhynchus, barred pipefish S. auliscus, barcheek pipefish S. exilis and chocolate pipefish S. euchrous. Results consistently differentiate S. auliscus from the other species and fail to distinguish all other specimens as distinct species, as indicated by extensive morphological overlap as well as incomplete lineage sorting and considerably low genetic divergence for 16s and coI genes(<1%). This study presents a taxonomic revision of eastern Pacific Syngnathus spp. and proposes the synonymy of S. leptorhynchus, S. euchrous and S. exilis, under the senior synonym, S. californiensis. There is still a need to study populations of Syngnathus spp. from north and south of the Californian province to assess whether these too are synonyms of the two-species recognised here.
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Affiliation(s)
- Eric Garcia
- Ecology and Evolutionary Biology, University of California, Santa Cruz, California, USA
- Department of Biological Sciences, Old Dominion University, Norfolk, Virginia, USA
| | - Cristy A Rice
- Department of Biological Science, California State University, Fullerton, California, USA
| | - Douglas J Eernisse
- Department of Biological Science, California State University, Fullerton, California, USA
| | - Kristy L Forsgren
- Department of Biological Science, California State University, Fullerton, California, USA
| | - Juan P Quimbayo
- Center for Marine Biology, University of São Paulo, São Paulo, Brazil
| | - Greg W Rouse
- Scripps Institution of Oceanography, University of California, San Diego, California, USA
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Molecular phylogeny and patterns of diversification in syngnathid fishes. Mol Phylogenet Evol 2016; 107:388-403. [PMID: 27989632 DOI: 10.1016/j.ympev.2016.10.003] [Citation(s) in RCA: 40] [Impact Index Per Article: 5.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/25/2016] [Revised: 08/19/2016] [Accepted: 10/06/2016] [Indexed: 11/22/2022]
Abstract
The family Syngnathidae is a large and diverse clade of morphologically unique bony fishes, with 57 genera and 300 described species of seahorses, pipefishes, pipehorses, and seadragons. They primarily inhabit shallow coastal waters in temperate and tropical oceans, and are characterized by a fused jaw, male brooding, and extraordinary crypsis. Phylogenetic relationships within the Syngnathidae remain poorly resolved due to lack of generic taxon sampling, few diagnostic morphological characters, and limited molecular data. The phylogenetic placement of the threatened, commercially exploited seahorses remains a topic of intense interest, with conflicting topologies based on morphology and predominantly mitochondrial genetic data. In this study, we integrate eight nuclear and mitochondrial markers and 17 morphological characters to investigate the phylogenetic structure of the family Syngnathidae at the generic level. We include 91 syngnathid species representing 48 of the 57 recognized genera, all major ocean basins, and a broad array of temperate and tropical habitats including rocky and coral reefs, sand and silt, mangroves, seagrass beds, estuaries, and rivers. Maximum likelihood and Bayesian analyses of 5160bp from eight loci produced high congruence among alternate topologies, defining well-supported and sometimes novel clades. We present a hypothesis that confirms a deep phylogenetic split between lineages with trunk- or tail-brood pouch placement, and provides significant new insights into the morphological evolution and biogeography of this highly derived fish clade. Based on the fundamental division between lineages - the tail brooding "Urophori" and the trunk brooding "Gastrophori" - we propose a revision of Syngnathidae classification into only two subfamilies: the Nerophinae and the Syngnathinae. We find support for distinct principal clades within the trunk-brooders and tail-brooders, the latter of which include seahorses, seadragons, independent lineages of pipehorses, and clades that originated in southern Australia and the Western Atlantic. We suggest the seahorse genus Hippocampus is of Indo-Pacific origin and its sister clade is an unexpected grouping of several morphologically disparate Indo-Pacific genera, including the Pacific pygmy pipehorses. Taxonomic revision is required for multiple genera, particularly to reflect deep evolutionary splits in nominal lineages from the Atlantic versus the Indo-Pacific.
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Otero-Ferrer F, Herrera R, López A, Socorro J, Molina L, Bouza C. First records of Hippocampus algiricus in the Canary Islands (north-east Atlantic Ocean) with an observation of hybridization with Hippocampus hippocampus. JOURNAL OF FISH BIOLOGY 2015; 87:1080-1089. [PMID: 26365616 DOI: 10.1111/jfb.12760] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 06/01/2014] [Accepted: 06/26/2015] [Indexed: 06/05/2023]
Abstract
Morphometric and genetic analyses confirmed the first records of the West African seahorse Hippocampus algiricus at Gran Canaria Island (north-east Atlantic Ocean), and also the first evidence of interspecific hybridization in seahorses. These results provide additional data on the distribution of H. algiricus that may help to establish future conservation strategies, and uncover a new potential sympatric scenario between H. algiricus and Hippocampus hippocampus.
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Affiliation(s)
- F Otero-Ferrer
- Grupo de Investigación en Acuicultura (GIA) and Universidad de Las Palmas de Gran Canaria (ULPGC), Taliarte, 35200 Telde, Las Palmas, Canary Islands, Spain
| | - R Herrera
- Servicio de Biodiversidad, Viceconsejería de Medio Ambiente, Consejería de Agricultura, Ganadería, Pesca y Medio Ambiente, C/Agustín Millares Carlo, 18, 35003, Las Palmas, Canary Islands, Spain
| | - A López
- Departamento de Xenética, Facultade de Veterinaria, Campus de Lugo, Universidade de Santiago de Compostela, Av. Carballo Calero s/n. 27002, Lugo, Spain
| | - J Socorro
- Grupo de Investigación en Acuicultura (GIA) and Universidad de Las Palmas de Gran Canaria (ULPGC), Taliarte, 35200 Telde, Las Palmas, Canary Islands, Spain
| | - L Molina
- Grupo de Investigación en Acuicultura (GIA) and Universidad de Las Palmas de Gran Canaria (ULPGC), Taliarte, 35200 Telde, Las Palmas, Canary Islands, Spain
| | - C Bouza
- Departamento de Xenética, Facultade de Veterinaria, Campus de Lugo, Universidade de Santiago de Compostela, Av. Carballo Calero s/n. 27002, Lugo, Spain
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VANHOVE MAARTENPM, ECONOMOU ALCIBIADESN, ZOGARIS STAMATIS, LARMUSEAU MAARTENHD, GIAKOUMI SOFIA, KALOGIANNI ELENI, VOLCKAERT FILIPAM, HUYSE TINE. Phylogenetics and biogeography of the Balkan ‘sand gobies’ (Teleostei: Gobiidae): vulnerable species in need of taxonomic revision. Biol J Linn Soc Lond 2011. [DOI: 10.1111/j.1095-8312.2011.01781.x] [Citation(s) in RCA: 30] [Impact Index Per Article: 2.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/30/2022]
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Mobley KB, Small CM, Jones AG. The genetics and genomics of Syngnathidae: pipefishes, seahorses and seadragons. JOURNAL OF FISH BIOLOGY 2011; 78:1624-1646. [PMID: 21651520 DOI: 10.1111/j.1095-8649.2011.02967.x] [Citation(s) in RCA: 30] [Impact Index Per Article: 2.3] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/30/2023]
Abstract
The goal of this review was to provide a historical overview of how molecular techniques have increased the understanding of the ecology and evolution of the family Syngnathidae (pipefishes, seahorses and seadragons). Molecular studies based primarily on mitochondrial DNA markers have proved their worth by elucidating complex phylogenetic relationships within the family. Phylogeographic studies, which have revealed how life-history traits and past climatic events shape geographic distributions and patterns of genetic variation within syngnathid species, also provide interesting case studies for the conservation and management of threatened species. The application of microsatellite DNA markers has opened a floodgate of studies concerned with the breeding biology of these fishes, which are interesting due to their unique reproductive mode of male pregnancy. Research in this area has contributed significantly to the understanding of mating patterns and sexual selection. Molecular markers may also be employed in studies of demography, migration and local breeding population sizes. Genomic studies have identified genes that are probably involved in male pregnancy and promise additional insights into various aspects of syngnathid biology at the level of the gene. Despite these advances, much more remains to be explored. Goals for future research should include: (1) a more inclusive phylogeny to resolve outstanding issues concerning the relationships within the family and higher order taxa, (2) a broader use of molecular studies to aid management and conservation efforts, (3) the inclusion of more genera in comparative behavioural studies and (4) the continued development of genomic resources for syngnathids to facilitate comparative genomic work.
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Affiliation(s)
- K B Mobley
- Umeå University, Department of Ecology and Environmental Science, 90187 Umeå, Sweden.
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Multiple mating and its relationship to alternative modes of gestation in male-pregnant versus female-pregnant fish species. Proc Natl Acad Sci U S A 2010; 107:18915-20. [PMID: 20956296 DOI: 10.1073/pnas.1013786107] [Citation(s) in RCA: 23] [Impact Index Per Article: 1.6] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/18/2022] Open
Abstract
We construct a verbal and graphical theory (the "fecundity-limitation hypothesis") about how constraints on the brooding space for embryos probably truncate individual fecundity in male-pregnant and female-pregnant species in ways that should differentially influence selection pressures for multiple mating by males or by females. We then review the empirical literature on genetically deduced rates of multiple mating by the embryo-brooding parent in various fish species with three alternative categories of pregnancy: internal gestation by males, internal gestation by females, and external gestation (in nests) by males. Multiple mating by the brooding gender was common in all three forms of pregnancy. However, rates of multiple mating as well as mate numbers for the pregnant parent averaged higher in species with external as compared with internal male pregnancy, and also for dams in female-pregnant species versus sires in male-pregnant species. These outcomes are all consistent with the theory that different types of pregnancy have predictable consequences for a parent's brood space, its effective fecundity, its opportunities and rewards for producing half-sib clutches, and thereby its exposure to selection pressures for seeking multiple mates. Overall, we try to fit these fecundity-limitation phenomena into a broader conceptual framework for mating-system evolution that also includes anisogamy, sexual-selection gradients, parental investment, and other selective factors that can influence the relative proclivities of males versus females to seek multiple sexual partners.
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WILSON ANTHONYB, EIGENMANN VERAGUTH IRIS. The impact of Pleistocene glaciation across the range of a widespread European coastal species. Mol Ecol 2010; 19:4535-53. [DOI: 10.1111/j.1365-294x.2010.04811.x] [Citation(s) in RCA: 75] [Impact Index Per Article: 5.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/30/2022]
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Species identification and genetic structure of threatened seahorses in Gran Canaria Island (Spain) using mitochondrial and microsatellite markers. CONSERV GENET 2010. [DOI: 10.1007/s10592-010-0116-6] [Citation(s) in RCA: 9] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/19/2022]
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Nagata N, Kubota K, Yahiro K, Sota T. Mechanical barriers to introgressive hybridization revealed by mitochondrial introgression patterns in Ohomopterus ground beetle assemblages. Mol Ecol 2008; 16:4822-36. [PMID: 18028179 DOI: 10.1111/j.1365-294x.2007.03569.x] [Citation(s) in RCA: 33] [Impact Index Per Article: 2.1] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
Abstract
To reveal the role of diverged body size and genital morphology in reproductive isolation among closely related species, we examined patterns of, and factors limiting, introgressive hybridization between sympatric Ohomopterus ground beetles in central Japan using mitochondrial NADH dehydrogenase subunit 5 (ND5) gene sequences. We sampled 17 local assemblages that consisted of two to five species and estimated levels of interspecific gene flow using the genetic distance, D(A), and maximum-likelihood estimates of gene flow. Sharing of haplotypes or haplotype lineages was detected between six of seven species that occurred in the study areas, indicating mitochondrial introgression. The intensity and direction of mitochondrial gene flow were variable among species pairs. To determine the factors affecting introgression patterns, we tested the relationships between interspecific D(A) and five independent variables: difference in body size, difference in genital size, phylogenetic relatedness (nuclear gene sequence divergence), habitat difference, and species richness of the assemblage. Body and genital size differences contributed significantly to preventing gene flow. Thus, mechanical isolation mechanisms reduce the chance of introgressive hybridization between closely related species. Our results highlight the role of morphological divergence in speciation and assemblage formation processes through mechanical isolation.
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Affiliation(s)
- Nobuaki Nagata
- Department of Zoology, Graduate School of Science, Kyoto University, Sakyo, Kyoto 606-8502, Japan.
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Wilson AB, Martin-Smith KM. Genetic monogamy despite social promiscuity in the pot-bellied seahorse (Hippocampus abdominalis). Mol Ecol 2007; 16:2345-52. [PMID: 17561895 DOI: 10.1111/j.1365-294x.2007.03243.x] [Citation(s) in RCA: 38] [Impact Index Per Article: 2.2] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
Abstract
Sexual selection theory predicts a positive correlation between relative parental investment and mate choice. In syngnathid fishes (seahorses and pipefish), males brood offspring in specialized brooding structures. While female-female mating competition has been demonstrated in some pipefishes, all seahorses (genus Hippocampus) studied to date have been found to have conventional sex roles with greater male-male competition for access to mates despite possessing the most complex brood structures in the family. Although multiple mating is common in pipefish, seahorses are again exceptional, exhibiting strict genetic monogamy. Both demographic and behavioural explanations have been offered to explain the lack of multiple mating in seahorse species, but these hypotheses have not yet been explicitly addressed. We investigated mating systems and brood parentage of the pot-bellied seahorse, Hippocampus abdominalis, a temperate-water species that is socially promiscuous with conventional sex roles in laboratory populations. We observed promiscuous courtship behaviour and sex-role reversal in high density, female-biased field populations of H. abdominalis. We hypothesize that sex roles are plastic in H. abdominalis, depending on local population density and sex ratio. Despite promiscuous courtship behaviour, all assayed male seahorses were genetically monogamous in both laboratory and wild populations. Physiological limitations associated with embryo incubation may explain the absence of multiple mating in seahorses and may have played an important role in the development of the unique reproductive behaviour typical in these species.
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Affiliation(s)
- A B Wilson
- Zoological Museum, University of Zürich, Winterthurerstrasse 190, 8057, Zurich, Switzerland.
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Wilson AB. Genetic signature of recent glaciation on populations of a near-shore marine fish species (Syngnathus leptorhynchus). Mol Ecol 2006; 15:1857-71. [PMID: 16689903 DOI: 10.1111/j.1365-294x.2006.02911.x] [Citation(s) in RCA: 52] [Impact Index Per Article: 2.9] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/30/2022]
Abstract
Continental glaciation has played a major role in shaping the present-day phylogeography of freshwater and terrestrial species in the Northern Hemisphere. Recent work suggests that coastal glaciation during ice ages may have also had a significant impact on marine species. The bay pipefish, Syngnathus leptorhynchus, is a near-shore Pacific coast fish species with an exceptionally wide latitudinal distribution, ranging from Bahia Santa Maria, Baja California to Prince William Sound, Alaska. Survey data indicate that S. leptorhynchus is experiencing a range expansion at the northern limit of its range, consistent with colonization from southern populations. The present study uses six novel microsatellite markers and mitochondrial DNA (mtDNA) sequence data to study the present-day population genetic structure of four coastal populations of S. leptorhynchus. Deficits in mtDNA and nuclear DNA diversity in northern populations from regions glaciated during the last glacial maximum (LGM) [c. 18 000 years before present (bp)] suggest that these populations were effected by glacial events. Direct estimates of population divergence times derived from both isolation and isolation-with-migration models of evolution are also consistent with a postglacial phylogenetic history of populations north of the LGM. Sequence data further indicate that a population at the southern end of the species range has been separated from the three northern populations since long before the last interglacial event (c. 130 000 years bp), suggesting that topographical features along the Pacific coast may maintain population separation in regions unimpacted by coastal glaciation.
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Affiliation(s)
- A B Wilson
- Genetics and Evolution, Conservation Biology Division, Northwest Fisheries Sciences Center, 2725 Montlake Blvd. E., Seattle, WA 98112, USA.
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