1
|
Ryoo S, Kang H, Lim DR, Kim JM, Won Y, Kim JY, King DP, Di Nardo A, Cha SH. Re-emergence of foot-and-mouth disease in the Republic of Korea caused by the O/ME-SA/Ind-2001e lineage. Front Vet Sci 2024; 11:1378769. [PMID: 38689851 PMCID: PMC11060149 DOI: 10.3389/fvets.2024.1378769] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/30/2024] [Accepted: 03/21/2024] [Indexed: 05/02/2024] Open
Abstract
The O/ME-SA/Ind-2001e foot-and-mouth disease virus (FMDV) lineage is a pandemic strain that has recently become dominant within East and Southeast Asia. During May 2023, this viral lineage spread to the Republic of Korea, where 11 outbreaks were detected on cattle and goat farms located in Cheongju and Jeungpyeong. Infected animals displayed typical FMD signs including vesicular lesions with drooling and anorexia. Molecular diagnostic testing and genetic analysis (VP1 sequencing) showed that the causative FMDVs belonged to the O/ME-SA/Ind-2001e lineage and shared the closest nucleotide identity (97.95-99.21%) to viruses that have been collected from Mongolia and South-East Asian countries. Phylogenetic analyses showed that these sequences were distinct to those collected from the previous Korean O/ME-SA/Ind-2001e lineage outbreaks in 2019, demonstrating that these cases are due to a new incursion of the virus into the country. Prompt implementation of emergency vaccination using antigenically matched serotype O vaccines (r1 value: 0.74-0.93), together with intensive active surveillance on farms surrounding the infected premises has successfully prevented further spread of FMD. These recent FMD outbreaks reinforce the importance of research to understand the risks associated with transboundary pathways in the region, in order to reduce the possibility of a further reintroduction of FMD into the Republic of Korea.
Collapse
Affiliation(s)
- Soyoon Ryoo
- Foot-and-Mouth Disease Diagnostic Division, Animal and Plant Quarantine Agency, Gimcheon, Republic of Korea
| | - Hyeonjeong Kang
- Foot-and-Mouth Disease Diagnostic Division, Animal and Plant Quarantine Agency, Gimcheon, Republic of Korea
| | - Da-Rae Lim
- Foot-and-Mouth Disease Diagnostic Division, Animal and Plant Quarantine Agency, Gimcheon, Republic of Korea
| | - Jae-Myung Kim
- Foot-and-Mouth Disease Diagnostic Division, Animal and Plant Quarantine Agency, Gimcheon, Republic of Korea
| | - Youngwoo Won
- Chungcheongbuk-do Livestock and Veterinary Service, Cheongju, Republic of Korea
| | - Ji Ye Kim
- Chungcheongbuk-do Livestock and Veterinary Service, Cheongju, Republic of Korea
| | | | | | - Sang-Ho Cha
- Foot-and-Mouth Disease Diagnostic Division, Animal and Plant Quarantine Agency, Gimcheon, Republic of Korea
| |
Collapse
|
2
|
Gunasekera U, Biswal JK, Machado G, Ranjan R, Subramaniam S, Rout M, Mohapatra JK, Pattnaik B, Singh RP, Arzt J, Perez A, VanderWaal K. Impact of mass vaccination on the spatiotemporal dynamics of FMD outbreaks in India, 2008-2016. Transbound Emerg Dis 2022; 69:e1936-e1950. [PMID: 35306749 PMCID: PMC9790522 DOI: 10.1111/tbed.14528] [Citation(s) in RCA: 4] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/04/2021] [Revised: 03/18/2022] [Accepted: 03/18/2022] [Indexed: 12/30/2022]
Abstract
Foot-and-mouth disease (FMD) is endemic in India, where circulation of serotypes O, A and Asia1 is frequent. Here, we provide an epidemiological assessment of the ongoing mass vaccination programs in regard to post-vaccination monitoring and outbreak occurrence. The objective of this study was assessing the contribution of mass vaccination campaigns in reducing the risk of FMD in India from 2008 to 2016 by evaluating sero-monitoring data and modelling the spatiotemporal dynamics of reported outbreaks. Through analyzing antibody titre data from >1 million animals sampled as part of pre- and post-vaccination monitoring, we show that the percent of animals with inferred immunological protection (based on ELISA) was highly variable across states but generally increased through time. In addition, the number of outbreaks in a state was negatively correlated with the percent of animals with inferred protection. We then analyzed the distribution of reported FMD outbreaks across states using a Bayesian space-time model. This approach provides better acuity to disentangle the effect of mass vaccination programs on outbreak occurrence, while accounting for other factors that contribute to spatiotemporal variability in outbreak counts, notably proximity to international borders and inherent spatiotemporal correlations in incidence. This model demonstrated a ∼50% reduction in the risk of outbreaks in states that were part of the vaccination program. In addition, after controlling for spatial autocorrelation in the data, states that had international borders experienced heightened risk of FMD outbreaks. These findings help inform risk-based control strategies for India as the country progresses towards reducing reported clinical disease.
Collapse
Affiliation(s)
- Umanga Gunasekera
- Department of Veterinary Population MedicineCollege of Veterinary Medicine, University of MinnesotaSt PaulMinnesotaUSA
| | | | - Gustavo Machado
- Department of Population Health and PathobiologyCollege of Veterinary MedicineRaleighNorth CarolinaUSA
| | - Rajeev Ranjan
- ICAR‐Directorate of Foot and Mouth DiseaseMukteswarNainitalUttarakhandIndia
| | | | - Manoranjan Rout
- ICAR‐Directorate of Foot and Mouth DiseaseMukteswarNainitalUttarakhandIndia
| | | | - Bramhadev Pattnaik
- ICAR‐Directorate of Foot and Mouth DiseaseMukteswarNainitalUttarakhandIndia
| | | | - Jonathan Arzt
- Foreign Animal Disease Research Unit, USDA‐ARSPlum Island Animal Disease CenterGreenportNew YorkUSA
| | - Andres Perez
- Department of Veterinary Population MedicineCollege of Veterinary Medicine, University of MinnesotaSt PaulMinnesotaUSA
| | - Kimberly VanderWaal
- Department of Veterinary Population MedicineCollege of Veterinary Medicine, University of MinnesotaSt PaulMinnesotaUSA
| |
Collapse
|
3
|
Hopker A, Pandey N, Bartholomew R, Blanton A, Hopker S, Dhamorikar A, Goswami J, Marsland R, Metha P, Sargison N. Livestock vaccination programme participation among smallholder farmers on the outskirts of National Parks and Tiger Reserves in the Indian states of Madhya Pradesh and Assam. PLoS One 2021; 16:e0256684. [PMID: 34449809 PMCID: PMC8396743 DOI: 10.1371/journal.pone.0256684] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/16/2020] [Accepted: 08/13/2021] [Indexed: 11/18/2022] Open
Abstract
Effective livestock vaccination has the potential to raise prosperity and food security for the rural poor in low and middle income countries. To understand factors affecting access to vaccination services, and guide future policy, smallholder farmers in three locations in India were questioned about vaccination of their cattle and buffalo, with particular reference to foot and mouth disease (FMD), haemorrhagic septicaemia (HS) and blackquarter (BQ). In the three regions 51%, 50%, and 31% of respondents reported vaccinating their livestock; well below any threshold for effective population level disease control. However, within the third region, 65% of respondents in villages immediately surrounding the Kaziranga National Park reported vaccinating their cattle. The majority of respondents in all three regions were aware of FMD and HS, awareness of BQ was high in the Kanha and Bandhavgarh regions, but much lower in the Kaziranga region. The majority of respondents had positive attitudes to vaccination; understood vaccination protected their animals from specific diseases; and wished to immunise their livestock. There was no significant association between the age or gender of respondent and the immunisation of their livestock. Common barriers to immunisation were: negative attitudes to vaccination; lack of awareness of date and time of vaccination events; and difficulty presenting animals. Poor access to vaccination services was significantly associated with not vaccinating livestock. Fear of adverse reactions to vaccines was not significantly associated with not vaccinating livestock. Respondents who reported that vets or animal health workers (AHWs) were their main source of animal health knowledge were significantly more likely to have immunised their livestock in the last twelve months. Participants cited poor communication from vaccinators as problematic, both in publicising immunisation programmes, and explaining the purpose of vaccination. Where vaccinations were provided free of charge, farmers commonly displayed passive attitudes to accessing vaccination services, awaiting organised “immunisation drives” rather than seeking vaccination themselves. Based on these findings the following recommendations are made to improve participation and effectiveness of immunisation programmes. Programmes should be planned to integrate with annual cycles of: disease risk, agricultural activity, seasonal climate, social calendar of villages; and maximise efficiency for vaccinators. Dates and times of immunisation in each village must be well publicised, as respondents frequently reported missing the vaccinators. Relevant farmer education should precede immunisation programmes to mitigate against poor knowledge or negative attitudes. Immunisation drives must properly engage beneficiaries, particularly ensuring that services are accessible to female livestock keepers, and sharing some responsibilities with local farmers. Payment of a small monetary contribution by animal keepers could be considered to encourage responsibility for disease prevention, making vaccination an active process by farmers.
Collapse
Affiliation(s)
- Andy Hopker
- Royal (Dick) School of Veterinary Studies, Easter Bush Veterinary Centre, University of Edinburgh, Roslin, Midlothian, Scotland, United Kingdom
- * E-mail:
| | - Naveen Pandey
- The Corbett Foundation, Kaziranga Office, District Golaghat, Assam, India
| | - Rosie Bartholomew
- Royal (Dick) School of Veterinary Studies, Easter Bush Veterinary Centre, University of Edinburgh, Roslin, Midlothian, Scotland, United Kingdom
| | - Abigail Blanton
- Royal (Dick) School of Veterinary Studies, Easter Bush Veterinary Centre, University of Edinburgh, Roslin, Midlothian, Scotland, United Kingdom
| | - Sophie Hopker
- Royal (Dick) School of Veterinary Studies, Easter Bush Veterinary Centre, University of Edinburgh, Roslin, Midlothian, Scotland, United Kingdom
| | | | - Jadumoni Goswami
- The Corbett Foundation, Kaziranga Office, District Golaghat, Assam, India
| | - Rebecca Marsland
- School of Social and Political Sciences, University of Edinburgh, George Square, Edinburgh, Scotland
| | - Prakash Metha
- The Corbett Foundation, Kaziranga Office, District Golaghat, Assam, India
| | - Neil Sargison
- Royal (Dick) School of Veterinary Studies, Easter Bush Veterinary Centre, University of Edinburgh, Roslin, Midlothian, Scotland, United Kingdom
| |
Collapse
|
4
|
Park MY, Han YJ, Choi EJ, Kim H, Pervin R, Shin W, Kwon D, Kim JM, Pyo HM. Post-vaccination Monitoring to Assess Foot-and-Mouth Disease Immunity at Population Level in Korea. Front Vet Sci 2021; 8:673820. [PMID: 34422940 PMCID: PMC8371437 DOI: 10.3389/fvets.2021.673820] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/28/2021] [Accepted: 06/22/2021] [Indexed: 11/27/2022] Open
Abstract
In South Korea, domestic cattle, pigs, and goats were subjected to mandatory foot-and-mouth disease (FMD) vaccination and year-round serosurveillance since 2011. In 2020, approximately USD 95 million was spent solely for FMD vaccine purchase for 59 million livestock, and 1.25 million samples were tested to estimate the population immunity and demonstrate the absence of virus circulation. As the FMD vaccination program was revised in 2018, the post-vaccination monitoring (PVM) was designed to evaluate the effectiveness of the vaccine program of three vaccines approved for routine use. To this end, monitoring post-vaccination immunity has been conducted by collecting 35,626 serum samples at 28 days post-vaccination following regular national vaccinations, which were carried out in April and in October in 2020. The design of the serological test for PVM was specially targeted at particular livestock groups, including dairy cattle, goats, and beef cattle aged 6–12 months, which were generally estimated to have a low expected seroprevalence. The risk factors had also been identified, considering the increased likelihood of infection in a particular location, herd size, and husbandry system applied in a targeted sample collection. Serum sample collection and SP-O and NSP antibody tests were performed by local veterinary laboratories using commercially available ELISAs. The current FMD vaccination program, which was performed twice a year following the regimen of primary vaccination and boost, resulted in over 80% population immunity. The seroprevalence monitored after the vaccination in fall was higher than the one studied in spring except in pigs. It was demonstrated that the seroprevalence of risk-based targeted samples ranged from 93.8 to 100% in cattle, 63.2 to 100% in pigs, and 20.0 to 100% in goats. Of note is the area near the North Korean borders which showed a relatively low seroprevalence among the targeted regions, and no NSP sero-positive reactor was detected in this region. When subpopulation immunity at the individual level was assessed, the seroprevalence in young cattle stock was slightly lower (95.8%) than that of adults (98.4%). In conclusion, the FMD vaccination campaign has been successfully implemented in Korea, and the PVM can be a supplementary program for massive routine surveillance in terms of providing timely information needed both to estimate population immunity and to properly target “risk-based surveillance.”
Collapse
Affiliation(s)
- Mi-Young Park
- Foot and Mouth Disease Diagnostic Division, Animal and Plant Quarantine Agency, Gimcheon-si, South Korea
| | - You Jin Han
- Foot and Mouth Disease Diagnostic Division, Animal and Plant Quarantine Agency, Gimcheon-si, South Korea
| | - Eun-Jin Choi
- Foot and Mouth Disease Diagnostic Division, Animal and Plant Quarantine Agency, Gimcheon-si, South Korea
| | - HeeYeon Kim
- Foot and Mouth Disease Diagnostic Division, Animal and Plant Quarantine Agency, Gimcheon-si, South Korea
| | - Rokeya Pervin
- Foot and Mouth Disease Diagnostic Division, Animal and Plant Quarantine Agency, Gimcheon-si, South Korea
| | - Wonseok Shin
- Foot and Mouth Disease Diagnostic Division, Animal and Plant Quarantine Agency, Gimcheon-si, South Korea
| | - Doheon Kwon
- Foot and Mouth Disease Diagnostic Division, Animal and Plant Quarantine Agency, Gimcheon-si, South Korea
| | - Jae Myoung Kim
- Foot and Mouth Disease Diagnostic Division, Animal and Plant Quarantine Agency, Gimcheon-si, South Korea
| | - Hyun Mi Pyo
- Foot and Mouth Disease Diagnostic Division, Animal and Plant Quarantine Agency, Gimcheon-si, South Korea
| |
Collapse
|
5
|
Campbell Z, Coleman P, Guest A, Kushwaha P, Ramuthivheli T, Osebe T, Perry B, Salt J. Prioritizing smallholder animal health needs in East Africa, West Africa, and South Asia using three approaches: Literature review, expert workshops, and practitioner surveys. Prev Vet Med 2021; 189:105279. [PMID: 33581421 PMCID: PMC8024747 DOI: 10.1016/j.prevetmed.2021.105279] [Citation(s) in RCA: 8] [Impact Index Per Article: 2.7] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/17/2020] [Revised: 12/18/2020] [Accepted: 01/18/2021] [Indexed: 12/15/2022]
Abstract
Managing the health needs of livestock contributes to reducing poverty and improving the livelihoods of smallholder and pastoralist livestock keepers globally. Animal health practitioners, producers, policymakers, and researchers all must prioritize how to mobilize limited resources. This study employed three approaches to prioritize animal health needs in East and West Africa and South Asia to identify diseases and syndromes that impact livestock keepers. The approaches were a) systematic literature review, b) a series of expert workshops, and c) a practitioner survey of veterinarians and para-veterinary professionals. The top constraints that emerged from all three approaches include endo/ ectoparasites, foot and mouth disease, brucellosis, peste des petits ruminants, Newcastle disease, and avian influenza. Expert workshops additionally identified contagious caprine pleuropneumonia, contagious bovine pleuropneumonia, mastitis, and reproductive disorders as constraints not emphasized in the literature review. Practitioner survey results additionally identified nutrition as a constraint for smallholder dairy and pastoralist small ruminant production. Experts attending the workshops agreed most constraints can be managed using existing veterinary technologies and best husbandry practices, which supports a shift away from focusing on individual diseases and new technologies towards addressing systemic challenges that limit access to veterinary services and inputs. Few research studies focused on incidence/ prevalence of disease and impact, suggesting better incorporation of socio-economic impact measures in future research would better represent the interests of livestock keepers.
Collapse
Affiliation(s)
- Zoë Campbell
- International Livestock Research Institute (ILRI), P.O. Box 30709, Nairobi, 00100, Kenya.
| | - Paul Coleman
- H20 Venture Partners, 33-35 George Street, Oxford, OX1 2AY, United Kingdom
| | - Andrea Guest
- H20 Venture Partners, 33-35 George Street, Oxford, OX1 2AY, United Kingdom
| | - Peetambar Kushwaha
- GALVmed Asia Office, Unit 118 & 120 B, Splendor Forum, Plot No 3, Jasola District Centre, Jasola, New Delhi, 110025, India
| | - Thembinkosi Ramuthivheli
- GALVmed Africa Office, International Livestock Research Institute (ILRI), Swing One, Naivasha Road, Nairobi, Kenya
| | - Tom Osebe
- GALVmed Africa Office, International Livestock Research Institute (ILRI), Swing One, Naivasha Road, Nairobi, Kenya
| | - Brian Perry
- Nuffield College of Clinical Medicine, University of Oxford, United Kingdom; College of Medicine and Veterinary Medicine, University of Edinburgh, Arthurstone House, Meigle, Blairgowrie, PH12 8QW, Scotland, United Kingdom
| | - Jeremy Salt
- GALVmed UK Office, Doherty Building, Pentlands Science Park, Bush Loan, Penicuik Edinburgh, EH26 0PZ, Scotland, United Kingdom
| |
Collapse
|
6
|
Foot-and-Mouth Disease Virus: Immunobiology, Advances in Vaccines and Vaccination Strategies Addressing Vaccine Failures-An Indian Perspective. Vaccines (Basel) 2019; 7:vaccines7030090. [PMID: 31426368 PMCID: PMC6789522 DOI: 10.3390/vaccines7030090] [Citation(s) in RCA: 30] [Impact Index Per Article: 6.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/30/2019] [Revised: 07/26/2019] [Accepted: 07/30/2019] [Indexed: 12/21/2022] Open
Abstract
A mass vaccination campaign in India seeks to control and eventually eradicate foot-and-mouth disease (FMD). Biosanitary measures along with FMD monitoring are being conducted along with vaccination. The implementation of the FMD control program has drastically reduced the incidence of FMD. However, cases are still reported, even in regions where vaccination is carried out regularly. Control of FMD outbreaks is difficult when the virus remains in circulation in the vaccinated population. Various FMD risk factors have been identified that are responsible for FMD in vaccinated areas. The factors are discussed along with strategies to address these challenges. The current chemically inactivated trivalent vaccine formulation containing strains of serotype O, A, and Asia 1 has limitations including thermolability and induction of only short-term immunity. Advantages and disadvantages of several new-generation alternate vaccine formulations are discussed. It is unfeasible to study every incidence of FMD in vaccinated animals/areas in such a big country as India with its huge livestock population. However, at the same time, it is absolutely necessary to identify the precise reason for vaccination failure. Failure to vaccinate is one reason for the occurrence of FMD in vaccinated areas. FMD epidemiology, emerging and re-emerging virus strains, and serological status over the past 10 years are discussed to understand the impact of vaccination and incidences of vaccination failure in India. Other factors that are important in vaccination failure that we discuss include disrupted herd immunity, health status of animals, FMD carrier status, and FMD prevalence in other species. Recommendations to boost the search of alternate vaccine formulation, strengthen the veterinary infrastructure, bolster the real-time monitoring of FMD, as well as a detailed investigation and documentation of every case of vaccination failure are provided with the goal of refining the control program.
Collapse
|
7
|
Paton DJ, Reeve R, Capozzo AV, Ludi A. Estimating the protection afforded by foot-and-mouth disease vaccines in the laboratory. Vaccine 2019; 37:5515-5524. [PMID: 31405637 DOI: 10.1016/j.vaccine.2019.07.102] [Citation(s) in RCA: 29] [Impact Index Per Article: 5.8] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/28/2019] [Revised: 07/28/2019] [Accepted: 07/31/2019] [Indexed: 10/26/2022]
Abstract
Foot-and-mouth disease (FMD) vaccines must be carefully selected and their application closely monitored to optimise their effectiveness. This review covers serological techniques for FMD vaccine quality control, including potency testing, vaccine matching and post-vaccination monitoring. It also discusses alternative laboratory procedures, such as antigen quantification and nucleotide sequencing, and briefly compares the approaches for FMD with those for measuring protection against influenza virus, where humoral immunity is also important. Serology is widely used to predict the protection afforded by vaccines and has great practical utility but also limitations. Animals differ in their responses to vaccines and in the protective mechanisms that they develop. Antibodies have a variety of properties and tests differ in what they measure. Antibody-virus interactions may vary between virus serotypes and strains and protection may be affected by the vaccination regime and the nature and timing of field virus challenge. Finally, tests employing biological reagents are difficult to standardise, whilst cross-protection data needed for test calibration and validation are scarce. All of this is difficult to reconcile with the desire for simple and universal criteria and thresholds for evaluating vaccines and vaccination responses and means that oversimplification of test procedures and their interpretation can lead to poor predictions. A holistic approach is therefore recommended, considering multiple sources of field, experimental and laboratory data. New antibody avidity and isotype tests seem promising alternatives to evaluate cross-protective, post-vaccination serological responses, taking account of vaccine potency as well as match. After choosing appropriate serological tests or test combinations and cut-offs, results should be interpreted cautiously and in context. Since opportunities for experimental challenge studies of cross-protection are limited and the approaches incompletely reflect real life, more field studies are needed to quantify cross-protection and its correlation to in vitro measurements.
Collapse
Affiliation(s)
- D J Paton
- The Pirbright Institute, Ash Road, Pirbright, Surrey GU24 0NF, UK.
| | - R Reeve
- Boyd Orr Centre for Population and Ecosystem Health, Institute of Biodiversity, Animal Health and Comparative Medicine, College of Medical, Veterinary and Life Sciences, University of Glasgow, Glasgow G12 8QQ, UK
| | - A V Capozzo
- Instituto de Virología, CICVyA, INTA, N Repetto y De Los Reseros s/n, Hurlingham (1686), Buenos Aires, Argentina; Consejo Nacional de Investigaciones Científicas y Tecnológicas, CONICET, Godoy Cruz 2290 (C1454FQB), Buenos Aires, Argentina
| | - A Ludi
- The Pirbright Institute, Ash Road, Pirbright, Surrey GU24 0NF, UK
| |
Collapse
|
8
|
Biswal JK, Ranjan R, Subramaniam S, Mohapatra JK, Patidar S, Sharma MK, Bertram MR, Brito B, Rodriguez LL, Pattnaik B, Arzt J. Genetic and antigenic variation of foot-and-mouth disease virus during persistent infection in naturally infected cattle and Asian buffalo in India. PLoS One 2019; 14:e0214832. [PMID: 31226113 PMCID: PMC6588224 DOI: 10.1371/journal.pone.0214832] [Citation(s) in RCA: 17] [Impact Index Per Article: 3.4] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/20/2019] [Accepted: 06/11/2019] [Indexed: 12/11/2022] Open
Abstract
The role of foot-and-mouth disease virus (FMDV) persistently infected ruminants in initiating new outbreaks remains controversial, and the perceived threat posed by such animals hinders international trade in FMD-endemic countries. In this study we report longitudinal analyses of genetic and antigenic variations of FMDV serotype O/ME-SA/Ind2001d sublineage during naturally occurring, persistent infection in cattle and buffalo at an organised dairy farm in India. The proportion of animals from which FMDV RNA was recovered was not significantly different between convalescent (post-clinical) and sub-clinically infected animals or between cattle and buffalo across the sampling period. However, infectious virus was isolated from a higher proportion of buffalo samples and for a longer duration compared to cattle. Analysis of the P1 sequences from recovered viruses indicated fixation of mutations at the rate of 1.816 x 10-2substitution/site/year (s/s/y) (95% CI 1.362–2.31 x 10−2 s/s/y). However, the majority of point mutations were transitional substitutions. Within individual animals, the mean dN/dS (ω) value for the P1 region varied from 0.076 to 0.357, suggesting the selection pressure acting on viral genomes differed substantially across individual animals. Statistical parsimony analysis indicated that all of the virus isolates from carrier animals originated from the outbreak virus. The antigenic relationship value as determined by 2D-VNT assay revealed fluctuation of antigenic variants within and between carrier animals during the carrier state which suggested that some carrier viruses had diverged substantially from the protection provided by the vaccine strain. This study contributes to understanding the extent of within-host and within-herd evolution that occurs during the carrier state of FMDV.
Collapse
Affiliation(s)
- Jitendra K. Biswal
- ICAR-Directorate of Foot and Mouth Disease, Mukteshwar, Nainital, Uttarakhand, India
| | - Rajeev Ranjan
- ICAR-Directorate of Foot and Mouth Disease, Mukteshwar, Nainital, Uttarakhand, India
| | - Saravanan Subramaniam
- ICAR-Directorate of Foot and Mouth Disease, Mukteshwar, Nainital, Uttarakhand, India
| | - Jajati K. Mohapatra
- ICAR-Directorate of Foot and Mouth Disease, Mukteshwar, Nainital, Uttarakhand, India
| | | | | | - Miranda R. Bertram
- Foreign Animal Disease Research Unit, USDA-ARS, Plum Island Animal Disease Center, Greenport, NY, United States of America
- Oak Ridge Institute for Science and Education, PIADC Research Participation Program, Oak Ridge, TN, United States of America
| | - Barbara Brito
- Foreign Animal Disease Research Unit, USDA-ARS, Plum Island Animal Disease Center, Greenport, NY, United States of America
- Oak Ridge Institute for Science and Education, PIADC Research Participation Program, Oak Ridge, TN, United States of America
| | - Luis L. Rodriguez
- Foreign Animal Disease Research Unit, USDA-ARS, Plum Island Animal Disease Center, Greenport, NY, United States of America
| | - Bramhadev Pattnaik
- ICAR-Directorate of Foot and Mouth Disease, Mukteshwar, Nainital, Uttarakhand, India
- * E-mail: (JA); (BP)
| | - Jonathan Arzt
- Foreign Animal Disease Research Unit, USDA-ARS, Plum Island Animal Disease Center, Greenport, NY, United States of America
- * E-mail: (JA); (BP)
| |
Collapse
|