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Gasparotti E, Vignali E, Scolaro M, Haxhiademi D, Celi S. A computational and experimental study of veno-arterial extracorporeal membrane oxygenation in cardiogenic shock: defining the trade-off between perfusion and afterload. Biomech Model Mechanobiol 2025:10.1007/s10237-025-01952-9. [PMID: 40237865 DOI: 10.1007/s10237-025-01952-9] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/24/2024] [Accepted: 03/19/2025] [Indexed: 04/18/2025]
Abstract
Veno-Arterial Extracorporeal Membrane Oxygenation (VA-ECMO) is a type of mechanical circulatory support used, among others, in case of cardiogenic shock, consisting in percutaneous cannulation of the femoral artery. Despite the widespread use of this procedure in clinical practice, a deeper understanding of the complex interaction between native and ECMO output, as well as the fluid dynamics and perfusion of aorta and its branches is still required. Herein, a numerical and experimental approach is presented to model a VA-ECMO procedure on a patient-specific aortic geometry. For both approaches, cardiogenic shock was modeled by considering three different severities of left ventricular failure (mild, moderate, and severe), corresponding to a reduction in cardiac output of 30%, 50%, and 70% relative to the healthy condition, respectively. For each case, different levels of the ECMO support were simulated, ranging from 0 to 6 l/min. The performance of the VA-ECMO configuration was evaluated in terms of both afterload increase and flow at all aortic branches. Both methods highlighted the afterload increase in high levels of ECMO support. Furthermore, numerical and experimental data revealed the existence of a trade-off level of ECMO support that guarantees healthy perfusion of all vessels with the lowest afterload. This correlation opened a pathway for the definition of a tool for determining a suitable level of ECMO support on the basis of the knowledge of patient-specific data.
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Affiliation(s)
- Emanuele Gasparotti
- BioCardioLab, Bioengineering Unit, Fondazione G. Monasterio, Via Aurelia Sud, 54100, Massa, Italy
| | - Emanuele Vignali
- BioCardioLab, Bioengineering Unit, Fondazione G. Monasterio, Via Aurelia Sud, 54100, Massa, Italy
| | - Massimo Scolaro
- Critical Care Unit, Fondazione G. Monasterio, Via Aurelia Sud, 54100, Massa, Italy
| | - Dorela Haxhiademi
- Critical Care Unit, Fondazione G. Monasterio, Via Aurelia Sud, 54100, Massa, Italy
| | - Simona Celi
- BioCardioLab, Bioengineering Unit, Fondazione G. Monasterio, Via Aurelia Sud, 54100, Massa, Italy.
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Hu M, Chen B, Luo Y. Computational fluid dynamics modelling of hemodynamics in aortic aneurysm and dissection: a review. Front Bioeng Biotechnol 2025; 13:1556091. [PMID: 40190707 PMCID: PMC11968685 DOI: 10.3389/fbioe.2025.1556091] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/06/2025] [Accepted: 03/10/2025] [Indexed: 04/09/2025] Open
Abstract
Hemodynamic analysis based on computational fluid dynamics (CFD) modelling is expected to improve risk stratification for patients with aortic aneurysms and dissections. However, the parameter settings in CFD simulations involve considerable variability and uncertainty. Additionally, the exact relationship between hemodynamic features and disease progression remains unclear. These challenges limit the clinical application of aortic hemodynamic models. This review presents a detailed overview of the workflow for CFD-based aortic hemodynamic analysis, with a focus on recent advancements in the field. We also conducted a systematic review of 27 studies with large sample sizes (n > 5) that examine the hemodynamic characteristics of aortic aneurysms and dissections. Some studies identified consistent relationships between hemodynamic features and disease progression, reinforcing the potential for clinical application of aortic hemodynamic models. However, limitations such as small sample sizes and oversimplified patient-specific models remain. These findings emphasize the need for larger, more detailed studies to refine CFD modelling strategies, strengthen the connection between hemodynamics and diseases, and ultimately facilitate the clinical use of aortic hemodynamic models in disease management.
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Affiliation(s)
- Mengqiang Hu
- State Key Laboratory of Transvascular Implantation Devices, Hangzhou, China
- Department of Technology, Boea Wisdom (Hangzhou) Network Technology Co., Ltd., Hangzhou, China
| | - Bing Chen
- State Key Laboratory of Transvascular Implantation Devices, Hangzhou, China
- The Second Affiliated Hospital of Zhejiang University, Hangzhou, China
| | - Yuanming Luo
- Department of Mechanical Engineering, The University of Iowa, Iowa City, IA, United States
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Catalano C, Crascì F, Puleo S, Scuoppo R, Pasta S, Raffa GM. Computational fluid dynamics in cardiac surgery and perfusion: A review. Perfusion 2025; 40:362-370. [PMID: 38850015 DOI: 10.1177/02676591241239277] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 06/09/2024]
Abstract
Cardiovascular diseases persist as a leading cause of mortality and morbidity, despite significant advances in diagnostic and surgical approaches. Computational Fluid Dynamics (CFD) represents a branch of fluid mechanics widely used in industrial engineering but is increasingly applied to the cardiovascular system. This review delves into the transformative potential for simulating cardiac surgery procedures and perfusion systems, providing an in-depth examination of the state-of-the-art in cardiovascular CFD modeling. The study first describes the rationale for CFD modeling and later focuses on the latest advances in heart valve surgery, transcatheter heart valve replacement, aortic aneurysms, and extracorporeal membrane oxygenation. The review underscores the role of CFD in better understanding physiopathology and its clinical relevance, as well as the profound impact of hemodynamic stimuli on patient outcomes. By integrating computational methods with advanced imaging techniques, CFD establishes a quantitative framework for understanding the intricacies of the cardiac field, providing valuable insights into disease progression and treatment strategies. As technology advances, the evolving synergy between computational simulations and clinical interventions is poised to revolutionize cardiovascular care. This collaboration sets the stage for more personalized and effective therapeutic strategies. With its potential to enhance our understanding of cardiac pathologies, CFD stands as a promising tool for improving patient outcomes in the dynamic landscape of cardiovascular medicine.
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Affiliation(s)
- Chiara Catalano
- Department of Engineering, Università degli Studi di Palermo, Palermo, Italy
| | - Fabrizio Crascì
- Department of Engineering, Università degli Studi di Palermo, Palermo, Italy
- Department of Research, IRCCS-ISMETT, Palermo, Italy
| | - Silvia Puleo
- Department of Engineering, Università degli Studi di Palermo, Palermo, Italy
| | - Roberta Scuoppo
- Department of Engineering, Università degli Studi di Palermo, Palermo, Italy
| | - Salvatore Pasta
- Department of Engineering, Università degli Studi di Palermo, Palermo, Italy
- Department of Research, IRCCS-ISMETT, Palermo, Italy
| | - Giuseppe M Raffa
- Department for the Treatment and Study of Cardiothoracic Diseases and Cardiothoracic Transplantation, IRCCS-ISMETT, Palermo, Italy
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Crugnola L, Vergara C, Fusini L, Fumagalli I, Luraghi G, Redaelli A, Pontone G. Computational hemodynamic indices to identify Transcatheter Aortic Valve Implantation degeneration. COMPUTER METHODS AND PROGRAMS IN BIOMEDICINE 2025; 259:108517. [PMID: 39602988 DOI: 10.1016/j.cmpb.2024.108517] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 05/04/2024] [Revised: 09/24/2024] [Accepted: 11/13/2024] [Indexed: 11/29/2024]
Abstract
BACKGROUND AND OBJECTIVES Structural Valve Deterioration (SVD) is the main limiting factor to the long-term durability of the bioprosthetic valves used for Transcatheter Aortic Valve Implantation (TAVI), a minimally invasive technique for the treatment of severe aortic stenosis. The aim of this retrospective study is to perform patient-specific computational analyses of blood dynamics shortly after TAVI to identify hemodynamic indices that correlate with a premature onset of SVD which is detected at 5-10 years long-term follow-up exam after TAVI. METHODS The study population comprises fourteen patients: seven cases with SVD at long-term follow-up were identified and seven cases without SVD were randomly extracted from the same cohort. Starting from pre-operative CT images, we created trustworthy post-TAVI scenarios by virtually inserting the bioprosthetic valve (stent and leaflets) and we qualitatively validated such virtual scenarios against post-TAVI CT scans, when available. We then performed numerical simulations imposing personalized inlet conditions based on patient-specific Echo Doppler cardiac output measurements and the numerical results were post-processed to identify suitable hemodynamics indices with the aim of discriminating between the SVD and non-SVD groups of patients. In particular, differences in terms of each individual index were evaluated using a Wilcoxon rank-sum test. Moreover, we defined three synthetic scores, based on suitably scaled hemodynamic indices of stress and vorticity, evaluated in different contexts: on the leaflets, in the ascending aorta, and in the whole domain. RESULTS We found that the hemodynamic index related to leaflets' OSI individually shows statistically significant differences (p=0.007) between the SVD and non-SVD groups. Moreover, our proposed synthetic scores are able to clearly isolate the SVD group both in a two-dimensional space given by the aorta and leaflets scores and by only considering the global synthetic score. CONCLUSION The results of this computational study suggest that blood dynamics may play an important role in creating the conditions that lead to SVD. Moreover, the proposed synthetic scores could provide further indications for clinicians in assessing and predicting TAVI valves' long-term performance.
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Affiliation(s)
- Luca Crugnola
- LaBS, Department of Chemistry, Materials and Chemical Engineering "Giulio Natta", Politecnico di Milano, Piazza Leonardo da Vinci 32, Milan, 20133, Italy.
| | - Christian Vergara
- LaBS, Department of Chemistry, Materials and Chemical Engineering "Giulio Natta", Politecnico di Milano, Piazza Leonardo da Vinci 32, Milan, 20133, Italy
| | - Laura Fusini
- Department of Perioperative Cardiology and Cardiovascular Imaging, Centro Cardiologico Monzino IRCSS, via Carlo Parea 4, Milan, 20138, Italy; Department of Electronics, Information and Bioengineering, Politecnico di Milano, Via Giuseppe Ponzio 34, Milan, 20133, Italy
| | - Ivan Fumagalli
- MOX, Department of Mathematics, Politecnico di Milano, Via Edoardo Bonardi 9, Milan, 20133, Italy
| | - Giulia Luraghi
- LaBS, Department of Chemistry, Materials and Chemical Engineering "Giulio Natta", Politecnico di Milano, Piazza Leonardo da Vinci 32, Milan, 20133, Italy
| | - Alberto Redaelli
- Department of Electronics, Information and Bioengineering, Politecnico di Milano, Via Giuseppe Ponzio 34, Milan, 20133, Italy
| | - Gianluca Pontone
- Department of Perioperative Cardiology and Cardiovascular Imaging, Centro Cardiologico Monzino IRCSS, via Carlo Parea 4, Milan, 20138, Italy; Department of Biomedical, Surgical and Dental Sciences, Università degli studi di Milano, Via della Commenda 10, Milan, 20122, Italy
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Girardin L, Lind N, von Tengg-Kobligk H, Balabani S, Díaz-Zuccarini V. Patient-specific compliant simulation framework informed by 4DMRI-extracted pulse wave Velocity: Application post-TEVAR. J Biomech 2024; 175:112266. [PMID: 39232449 DOI: 10.1016/j.jbiomech.2024.112266] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/21/2024] [Revised: 07/11/2024] [Accepted: 08/06/2024] [Indexed: 09/06/2024]
Abstract
We introduce a new computational framework that utilises Pulse Wave Velocity (PWV) extracted directly from 4D flow MRI (4DMRI) to inform patient-specific compliant computational fluid dynamics (CFD) simulations of a Type-B aortic dissection (TBAD), post-thoracic endovascular aortic repair (TEVAR). The thoracic aortic geometry, a 3D inlet velocity profile (IVP) and dynamic outlet boundary conditions are derived from 4DMRI and brachial pressure patient data. A moving boundary method (MBM) is applied to simulate aortic wall displacement. The aortic wall stiffness is estimated through two methods: one relying on area-based distensibility and the other utilising regional pulse wave velocity (RPWV) distensibility, further fine-tuned to align with in vivo values. Predicted pressures and outlet flow rates were within 2.3 % of target values. RPWV-based simulations were more accurate in replicating in vivo hemodynamics than the area-based ones. RPWVs were closely predicted in most regions, except the endograft. Systolic flow reversal ratios (SFRR) were accurately captured, while differences above 60 % in in-plane rotational flow (IRF) between the simulations were observed. Significant disparities in predicted wall shear stress (WSS)-based indices were observed between the two approaches, especially the endothelial cell activation potential (ECAP). At the isthmus, the RPWV-driven simulation indicated a mean ECAP>1.4 Pa-1 (critical threshold), indicating areas potentially prone to thrombosis, not captured by the area-based simulation. RPWV-driven simulation results agree well with 4DMRI measurements, validating the proposed pipeline and facilitating a comprehensive assessment of surgical decision-making scenarios and potential complications, such as thrombosis and aortic growth.
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Affiliation(s)
- Louis Girardin
- University College London, Department of Mechanical Engineering, Torrington Place, London WC1E7JE, UK; Welcome/ESPRC Centre for Interventional and Surgical Sciences (WEISS), 43-45 Foley Street, London W1W7TS, UK.
| | - Niklas Lind
- Department of Diagnostic of Interventional and Pediatric Radiology, Inselspital, Bern 3010, Switzerland.
| | - Hendrik von Tengg-Kobligk
- Department of Diagnostic of Interventional and Pediatric Radiology, Inselspital, Bern 3010, Switzerland.
| | - Stavroula Balabani
- University College London, Department of Mechanical Engineering, Torrington Place, London WC1E7JE, UK; Welcome/ESPRC Centre for Interventional and Surgical Sciences (WEISS), 43-45 Foley Street, London W1W7TS, UK.
| | - Vanessa Díaz-Zuccarini
- University College London, Department of Mechanical Engineering, Torrington Place, London WC1E7JE, UK; Welcome/ESPRC Centre for Interventional and Surgical Sciences (WEISS), 43-45 Foley Street, London W1W7TS, UK.
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Perinajová R, van de Ven T, Roelse E, Xu F, Juffermans J, Westenberg J, Lamb H, Kenjereš S. A comprehensive MRI-based computational model of blood flow in compliant aorta using radial basis function interpolation. Biomed Eng Online 2024; 23:69. [PMID: 39039565 PMCID: PMC11265469 DOI: 10.1186/s12938-024-01251-x] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/06/2023] [Accepted: 06/03/2024] [Indexed: 07/24/2024] Open
Abstract
BACKGROUND Properly understanding the origin and progression of the thoracic aortic aneurysm (TAA) can help prevent its growth and rupture. For a better understanding of this pathogenesis, the aortic blood flow has to be studied and interpreted in great detail. We can obtain detailed aortic blood flow information using magnetic resonance imaging (MRI) based computational fluid dynamics (CFD) with a prescribed motion of the aortic wall. METHODS We performed two different types of simulations-static (rigid wall) and dynamic (moving wall) for healthy control and a patient with a TAA. For the latter, we have developed a novel morphing approach based on the radial basis function (RBF) interpolation of the segmented 4D-flow MRI geometries at different time instants. Additionally, we have applied reconstructed 4D-flow MRI velocity profiles at the inlet with an automatic registration protocol. RESULTS The simulated RBF-based movement of the aorta matched well with the original 4D-flow MRI geometries. The wall movement was most dominant in the ascending aorta, accompanied by the highest variation of the blood flow patterns. The resulting data indicated significant differences between the dynamic and static simulations, with a relative difference for the patient of 7.47±14.18% in time-averaged wall shear stress and 15.97±43.32% in the oscillatory shear index (for the whole domain). CONCLUSIONS In conclusion, the RBF-based morphing approach proved to be numerically accurate and computationally efficient in capturing complex kinematics of the aorta, as validated by 4D-flow MRI. We recommend this approach for future use in MRI-based CFD simulations in broad population studies. Performing these would bring a better understanding of the onset and growth of TAA.
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Affiliation(s)
- Romana Perinajová
- Department of Chemical Engineering, Faculty of Applied Sciences, Delft University of Technology, Delft, The Netherlands.
- J.M. Burgerscentrum Research School for Fluid Mechanics, Delft, The Netherlands.
| | - Thijn van de Ven
- Department of Chemical Engineering, Faculty of Applied Sciences, Delft University of Technology, Delft, The Netherlands
| | - Elise Roelse
- Department of Chemical Engineering, Faculty of Applied Sciences, Delft University of Technology, Delft, The Netherlands
| | - Fei Xu
- Department of Chemical Engineering, Faculty of Applied Sciences, Delft University of Technology, Delft, The Netherlands
- J.M. Burgerscentrum Research School for Fluid Mechanics, Delft, The Netherlands
| | - Joe Juffermans
- Department of Radiology, Leiden University Medical Center, Leiden, The Netherlands
| | - Jos Westenberg
- Department of Radiology, Leiden University Medical Center, Leiden, The Netherlands
| | - Hildo Lamb
- Department of Radiology, Leiden University Medical Center, Leiden, The Netherlands
| | - Saša Kenjereš
- Department of Chemical Engineering, Faculty of Applied Sciences, Delft University of Technology, Delft, The Netherlands.
- J.M. Burgerscentrum Research School for Fluid Mechanics, Delft, The Netherlands.
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Martínez A, Hoeijmakers M, Geronzi L, Morgenthaler V, Tomasi J, Rochette M, Biancolini ME. Effect of turbulence and viscosity models on wall shear stress derived biomarkers for aorta simulations. Comput Biol Med 2023; 167:107603. [PMID: 37922602 DOI: 10.1016/j.compbiomed.2023.107603] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/13/2023] [Revised: 09/12/2023] [Accepted: 10/17/2023] [Indexed: 11/07/2023]
Abstract
Ascending aorta simulations provide insight into patient-specific hemodynamic conditions. Numerous studies have assessed fluid biomarkers which show a potential to aid clinicians in the diagnosis process. Unfortunately, there exists a large disparity in the computational methodology used to model turbulence and viscosity. Recognizing this disparity, some authors focused on analysing the influence of either the turbulence or viscosity models on the biomarkers in order to quantify the importance of these model choices. However, no analysis has yet been done on their combined effect. In order to fully understand and quantify the effect of the computational methodology, an assessment of the combined effect of turbulence and viscosity model choice was performed. Our results show that (1) non-Newtonian viscosity has greater impact (2.9-5.0%) on wall shear stress than Large Eddy Simulation turbulence modelling (0.1-1.4%), (2) the contribution of non-Newtonian viscosity is amplified when combined with a subgrid-scale turbulence model, (3) wall shear stress is underestimated when considering Newtonian viscosity by 2.9-5.0% and (4) cycle-to-cycle variability can impact the results as much as the numerical model if insufficient cycles are performed. These results demonstrate that, when assessing the effect of computational methodologies, the resultant combined effect of the different modelling assumptions differs from the aggregated effect of the isolated modifications. Accurate aortic flow modelling requires non-Newtonian viscosity and Large Eddy Simulation turbulence modelling.
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Affiliation(s)
- Antonio Martínez
- University of Rome Tor Vergata, Rome, Italy; Ansys France, Villeurbanne, France.
| | | | - Leonardo Geronzi
- University of Rome Tor Vergata, Rome, Italy; Ansys France, Villeurbanne, France
| | | | - Jacques Tomasi
- University of Rennes, CHU Rennes, Inserm, LTSI-UMR 1099, F-35000, Rennes, France
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Garzia S, Scarpolini MA, Mazzoli M, Capellini K, Monteleone A, Cademartiri F, Positano V, Celi S. Coupling synthetic and real-world data for a deep learning-based segmentation process of 4D flow MRI. COMPUTER METHODS AND PROGRAMS IN BIOMEDICINE 2023; 242:107790. [PMID: 37708583 DOI: 10.1016/j.cmpb.2023.107790] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 03/20/2023] [Revised: 08/07/2023] [Accepted: 09/01/2023] [Indexed: 09/16/2023]
Abstract
BACKGROUND AND OBJECTIVE Phase contrast magnetic resonance imaging (4D flow MRI) is an imaging technique able to provide blood velocity in vivo and morphological information. This capability has been used to study mainly the hemodynamics of large vessels, such as the thoracic aorta. However, the segmentation of 4D flow MRI data is a complex and time-consuming task. In recent years, neural networks have shown great accuracy in segmentation tasks if large datasets are provided. Unfortunately, in the context of 4D flow MRI, the availability of these data is limited due to its recent adoption in clinical settings. In this study, we propose a pipeline for generating synthetic thoracic aorta phase contrast magnetic resonance angiography (PCMRA) to expand the limited dataset of patient-specific PCMRA images, ultimately improving the accuracy of the neural network segmentation even with a small real dataset. METHODS The pipeline involves several steps. First, a statistical shape model is used to synthesize new artificial geometries to improve data numerosity and variability. Secondly, computational fluid dynamics simulations are employed to simulate the velocity fields and, finally, after a downsampling and a signal-to-noise and velocity limit adjustment in both frequency and spatial domains, volumes are obtained using the PCMRA formula. These synthesized volumes are used in combination with real-world data to train a 3D U-Net neural network. Different settings of real and synthetic data are tested. RESULTS Incorporating synthetic data into the training set significantly improved the segmentation performance compared to using only real data. The experiments with synthetic data achieved a DICE score (DS) value of 0.83 and a better target reconstruction with respect to the case with only real data (DS = 0.65). CONCLUSION The proposed pipeline demonstrated the ability to increase the dataset in terms of numerosity and variability and to improve the segmentation accuracy for the thoracic aorta using PCMRA.
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Affiliation(s)
- Simone Garzia
- BioCardioLab, UOC Bioingegneria, Fondazione Toscana G Monasterio, Via Aurelia Sud, Massa, 54100, Italy; Department of Information Engineering, University of Pisa, Via Caruso, Pisa, 56122, Italy
| | - Martino Andrea Scarpolini
- BioCardioLab, UOC Bioingegneria, Fondazione Toscana G Monasterio, Via Aurelia Sud, Massa, 54100, Italy; Department of Industrial Engineering, University of Rome "Tor Vergata", Via del Politecnico, Roma, 00133, Italy
| | - Marilena Mazzoli
- BioCardioLab, UOC Bioingegneria, Fondazione Toscana G Monasterio, Via Aurelia Sud, Massa, 54100, Italy; Department of Information Engineering, University of Pisa, Via Caruso, Pisa, 56122, Italy
| | - Katia Capellini
- BioCardioLab, UOC Bioingegneria, Fondazione Toscana G Monasterio, Via Aurelia Sud, Massa, 54100, Italy
| | - Angelo Monteleone
- Department of Radiology, Fondazione Toscana G Monasterio, Via Moruzzi, Pisa, 56122, Italy
| | - Filippo Cademartiri
- Department of Radiology, Fondazione Toscana G Monasterio, Via Moruzzi, Pisa, 56122, Italy
| | - Vincenzo Positano
- BioCardioLab, UOC Bioingegneria, Fondazione Toscana G Monasterio, Via Aurelia Sud, Massa, 54100, Italy
| | - Simona Celi
- BioCardioLab, UOC Bioingegneria, Fondazione Toscana G Monasterio, Via Aurelia Sud, Massa, 54100, Italy.
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Marin-Castrillon DM, Geronzi L, Boucher A, Lin S, Morgant MC, Cochet A, Rochette M, Leclerc S, Ambarki K, Jin N, Aho LS, Lalande A, Bouchot O, Presles B. Segmentation of the aorta in systolic phase from 4D flow MRI: multi-atlas vs. deep learning. MAGMA (NEW YORK, N.Y.) 2023; 36:687-700. [PMID: 36800143 DOI: 10.1007/s10334-023-01066-2] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 07/15/2022] [Revised: 11/26/2022] [Accepted: 01/24/2023] [Indexed: 02/18/2023]
Abstract
OBJECTIVE In the management of the aortic aneurysm, 4D flow magnetic resonance Imaging provides valuable information for the computation of new biomarkers using computational fluid dynamics (CFD). However, accurate segmentation of the aorta is required. Thus, our objective is to evaluate the performance of two automatic segmentation methods on the calculation of aortic wall pressure. METHODS Automatic segmentation of the aorta was performed with methods based on deep learning and multi-atlas using the systolic phase in the 4D flow MRI magnitude image of 36 patients. Using mesh morphing, isotopological meshes were generated, and CFD was performed to calculate the aortic wall pressure. Node-to-node comparisons of the pressure results were made to identify the most robust automatic method respect to the pressures obtained with a manually segmented model. RESULTS Deep learning approach presented the best segmentation performance with a mean Dice similarity coefficient and a mean Hausdorff distance (HD) equal to 0.92+/- 0.02 and 21.02+/- 24.20 mm, respectively. At the global level HD is affected by the performance in the abdominal aorta. Locally, this distance decreases to 9.41+/- 3.45 and 5.82+/- 6.23 for the ascending and descending thoracic aorta, respectively. Moreover, with respect to the pressures from the manual segmentations, the differences in the pressures computed from deep learning were lower than those computed from multi-atlas method. CONCLUSION To reduce biases in the calculation of aortic wall pressure, accurate segmentation is needed, particularly in regions with high blood flow velocities. Thus, the deep learning segmen-tation method should be preferred.
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Affiliation(s)
| | | | - Arnaud Boucher
- Imaging and Artificial Vision Research Laboratory, University of Burgundy, Dijon, France
| | - Siyu Lin
- Imaging and Artificial Vision Research Laboratory, University of Burgundy, Dijon, France
| | - Marie-Catherine Morgant
- Imaging and Artificial Vision Research Laboratory, University of Burgundy, Dijon, France
- Department of cardiovascular and thoracic surgery, University Hospital of Dijon, Dijon, France
| | - Alexandre Cochet
- Imaging and Artificial Vision Research Laboratory, University of Burgundy, Dijon, France
- Medical Imaging Department, University Hospital of Dijon, Dijon, France
| | | | - Sarah Leclerc
- Imaging and Artificial Vision Research Laboratory, University of Burgundy, Dijon, France
| | | | - Ning Jin
- Siemens Medical Solutions, Nancy, France
| | - Ludwig Serge Aho
- Department of Epidemiology and Hygiene, University Hospital of Dijon, Dijon, France
| | - Alain Lalande
- Imaging and Artificial Vision Research Laboratory, University of Burgundy, Dijon, France
- Medical Imaging Department, University Hospital of Dijon, Dijon, France
| | - Olivier Bouchot
- Imaging and Artificial Vision Research Laboratory, University of Burgundy, Dijon, France
- Department of cardiovascular and thoracic surgery, University Hospital of Dijon, Dijon, France
| | - Benoit Presles
- Imaging and Artificial Vision Research Laboratory, University of Burgundy, Dijon, France.
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Mariotti A, Celi S, Antonuccio MN, Salvetti MV. Impact of the Spatial Velocity Inlet Distribution on the Hemodynamics of the Thoracic Aorta. Cardiovasc Eng Technol 2023; 14:713-725. [PMID: 37726567 DOI: 10.1007/s13239-023-00682-2] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Submit a Manuscript] [Subscribe] [Scholar Register] [Received: 01/21/2022] [Accepted: 09/01/2023] [Indexed: 09/21/2023]
Abstract
The impact of the distribution in space of the inlet velocity in the numerical simulations of the hemodynamics in the thoracic aorta is systematically investigated. A real healthy aorta geometry, for which in-vivo measurements are available, is considered. The distribution is modeled through a truncated cone shape, which is a suitable approximation of the real one downstream of a trileaflet aortic valve during the systolic part of the cardiac cycle. The ratio between the upper and the lower base of the truncated cone and the position of the center of the upper base are selected as uncertain parameters. A stochastic approach is chosen, based on the generalized Polynomial Chaos expansion, to obtain accurate response surfaces of the quantities of interest in the parameter space. The selected parameters influence the velocity distribution in the ascending aorta. Consequently, effects on the wall shear stress are observed, confirming the need to use patient-specific inlet conditions if interested in the hemodynamics of this region. The surface base ratio is globally the most important parameter. Conversely, the impact on the velocity and wall shear stress in the aortic arch and descending aorta is almost negligible.
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Affiliation(s)
- Alessandro Mariotti
- Civil and Industrial Engineering Department, University of Pisa, Largo Lucio Lazzarino, 2, 56122, Pisa, Italy
| | - Simona Celi
- BioCardioLab, Bioengineering Unit, Heart Hospital, Fondazione CNR - Regione Toscana G. Monasterio, Via Aurelia Sud, 54100, Massa, Italy.
| | - Maria Nicole Antonuccio
- BioCardioLab, Bioengineering Unit, Heart Hospital, Fondazione CNR - Regione Toscana G. Monasterio, Via Aurelia Sud, 54100, Massa, Italy
| | - Maria Vittoria Salvetti
- Civil and Industrial Engineering Department, University of Pisa, Largo Lucio Lazzarino, 2, 56122, Pisa, Italy
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Scarpolini MA, Mazzoli M, Celi S. Enabling supra-aortic vessels inclusion in statistical shape models of the aorta: a novel non-rigid registration method. Front Physiol 2023; 14:1211461. [PMID: 37637150 PMCID: PMC10450506 DOI: 10.3389/fphys.2023.1211461] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/24/2023] [Accepted: 07/11/2023] [Indexed: 08/29/2023] Open
Abstract
Statistical Shape Models (SSMs) are well-established tools for assessing the variability of 3D geometry and for broadening a limited set of shapes. They are widely used in medical imaging due to their ability to model complex geometries and their high efficiency as generative models. The principal step behind these techniques is a registration phase, which, in the case of complex geometries, can be a critical issue due to the correspondence problem, as it necessitates the development of correspondence mapping between shapes. The thoracic aorta, with its high level of morphological complexity, poses a multi-scale deformation problem due to the presence of several branch vessels with varying diameters. Moreover, branch vessels exhibit significant variability in shape, making the correspondence optimization even more challenging. Consequently, existing studies have focused on developing SSMs based only on the main body of the aorta, excluding the supra-aortic vessels from the analysis. In this work, we present a novel non-rigid registration algorithm based on optimizing a differentiable distance function through a modified gradient descent approach. This strategy enables the inclusion of custom, domain-specific constraints in the objective function, which act as landmarks during the registration phase. The algorithm's registration performance was tested and compared to an alternative Statistical Shape modeling framework, and subsequently used for the development of a comprehensive SSM of the thoracic aorta, including the supra-aortic vessels. The developed SSM was further evaluated against the alternative framework in terms of generalisation, specificity, and compactness to assess its effectiveness.
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Affiliation(s)
- Martino Andrea Scarpolini
- BioCardioLab, Bioengineering Unit, Fondazione Toscana G. Monasterio, Ospedale del Cuore, Massa, Italy
- Department of Industrial Engineering, University of Rome “Tor Vergata”, Roma, Italy
| | - Marilena Mazzoli
- BioCardioLab, Bioengineering Unit, Fondazione Toscana G. Monasterio, Ospedale del Cuore, Massa, Italy
- Department of Information Engineering, University of Pisa, Pisa, Italy
| | - Simona Celi
- BioCardioLab, Bioengineering Unit, Fondazione Toscana G. Monasterio, Ospedale del Cuore, Massa, Italy
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12
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Fumagalli I, Polidori R, Renzi F, Fusini L, Quarteroni A, Pontone G, Vergara C. Fluid-structure interaction analysis of transcatheter aortic valve implantation. INTERNATIONAL JOURNAL FOR NUMERICAL METHODS IN BIOMEDICAL ENGINEERING 2023; 39:e3704. [PMID: 36971047 DOI: 10.1002/cnm.3704] [Citation(s) in RCA: 3] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 09/28/2022] [Accepted: 03/19/2023] [Indexed: 06/07/2023]
Abstract
Transcatheter aortic valve implantation (TAVI) is a minimally invasive intervention for the treatment of severe aortic valve stenosis. The main cause of failure is the structural deterioration of the implanted prosthetic leaflets, possibly inducing a valvular re-stenosis 5-10 years after the implantation. Based solely on pre-implantation data, the aim of this work is to identify fluid-dynamics and structural indices that may predict the possible valvular deterioration, in order to assist the clinicians in the decision-making phase and in the intervention design. Patient-specific, pre-implantation geometries of the aortic root, the ascending aorta, and the native valvular calcifications were reconstructed from computed tomography images. The stent of the prosthesis was modeled as a hollow cylinder and virtually implanted in the reconstructed domain. The fluid-structure interaction between the blood flow, the stent, and the residual native tissue surrounding the prosthesis was simulated by a computational solver with suitable boundary conditions. Hemodynamical and structural indicators were analyzed for five different patients that underwent TAVI - three with prosthetic valve degeneration and two without degeneration - and the comparison of the results showed a correlation between the leaflets' structural degeneration and the wall shear stress distribution on the proximal aortic wall. This investigation represents a first step towards computational predictive analysis of TAVI degeneration, based on pre-implantation data and without requiring additional peri-operative or follow-up information. Indeed, being able to identify patients more likely to experience degeneration after TAVI may help to schedule a patient-specific timing of follow-up.
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Affiliation(s)
- Ivan Fumagalli
- MOX, Dipartimento di Matematica, Politecnico di Milano, Milan, Italy
| | - Rebecca Polidori
- LaBS, Dipartimento di Chimica, Materiali e Ingegneria Chimica, Politecnico di Milano, Milan, Italy
| | - Francesca Renzi
- LaBS, Dipartimento di Chimica, Materiali e Ingegneria Chimica, Politecnico di Milano, Milan, Italy
| | - Laura Fusini
- Department of Perioperative Cardiology and Cardiovascular Imaging, Centro Cardiologico Monzino IRCSS, Milan, Italy
- Department of Electronics, Information and Biomedical Engineering, Politecnico di Milano, Milan, Italy
| | - Alfio Quarteroni
- MOX, Dipartimento di Matematica, Politecnico di Milano, Milan, Italy
- Institute of Mathematics, École Polytechnique Fédérale de Lausanne, Lausanne, Switzerland
| | - Gianluca Pontone
- Department of Perioperative Cardiology and Cardiovascular Imaging, Centro Cardiologico Monzino IRCSS, Milan, Italy
| | - Christian Vergara
- LaBS, Dipartimento di Chimica, Materiali e Ingegneria Chimica, Politecnico di Milano, Milan, Italy
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13
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Calò K, Capellini K, De Nisco G, Mazzi V, Gasparotti E, Gallo D, Celi S, Morbiducci U. Impact of wall displacements on the large-scale flow coherence in ascending aorta. J Biomech 2023; 154:111620. [PMID: 37178494 DOI: 10.1016/j.jbiomech.2023.111620] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/09/2023] [Revised: 05/02/2023] [Accepted: 05/03/2023] [Indexed: 05/15/2023]
Abstract
In the context of aortic hemodynamics, uncertainties affecting blood flow simulations hamper their translational potential as supportive technology in clinics. Computational fluid dynamics (CFD) simulations under rigid-walls assumption are largely adopted, even though the aorta contributes markedly to the systemic compliance and is characterized by a complex motion. To account for personalized wall displacements in aortic hemodynamics simulations, the moving-boundary method (MBM) has been recently proposed as a computationally convenient strategy, although its implementation requires dynamic imaging acquisitions not always available in clinics. In this study we aim to clarify the real need for introducing aortic wall displacements in CFD simulations to accurately capture the large-scale flow structures in the healthy human ascending aorta (AAo). To do that, the impact of wall displacements is analyzed using subject-specific models where two CFD simulations are performed imposing (1) rigid walls, and (2) personalized wall displacements adopting a MBM, integrating dynamic CT imaging and a mesh morphing technique based on radial basis functions. The impact of wall displacements on AAo hemodynamics is analyzed in terms of large-scale flow patterns of physiological significance, namely axial blood flow coherence (quantified applying the Complex Networks theory), secondary flows, helical flow and wall shear stress (WSS). From the comparison with rigid-wall simulations, it emerges that wall displacements have a minor impact on the AAo large-scale axial flow, but they can affect secondary flows and WSS directional changes. Overall, helical flow topology is moderately affected by aortic wall displacements, whereas helicity intensity remains almost unchanged. We conclude that CFD simulations with rigid-wall assumption can be a valid approach to study large-scale aortic flows of physiological significance.
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Affiliation(s)
- Karol Calò
- Department of Mechanical and Aerospace Engineering, Politecnico di Torino, Turin, Italy; PoliTo(BIO)Med Lab, Politecnico di Torino, Turin, Italy
| | - Katia Capellini
- BioCardioLab, Bioengineering Unit - Heart Hospital, Fondazione Toscana "G. Monasterio", Massa, Italy
| | - Giuseppe De Nisco
- Department of Mechanical and Aerospace Engineering, Politecnico di Torino, Turin, Italy; PoliTo(BIO)Med Lab, Politecnico di Torino, Turin, Italy
| | - Valentina Mazzi
- Department of Mechanical and Aerospace Engineering, Politecnico di Torino, Turin, Italy; PoliTo(BIO)Med Lab, Politecnico di Torino, Turin, Italy
| | - Emanuele Gasparotti
- BioCardioLab, Bioengineering Unit - Heart Hospital, Fondazione Toscana "G. Monasterio", Massa, Italy
| | - Diego Gallo
- Department of Mechanical and Aerospace Engineering, Politecnico di Torino, Turin, Italy; PoliTo(BIO)Med Lab, Politecnico di Torino, Turin, Italy
| | - Simona Celi
- BioCardioLab, Bioengineering Unit - Heart Hospital, Fondazione Toscana "G. Monasterio", Massa, Italy
| | - Umberto Morbiducci
- Department of Mechanical and Aerospace Engineering, Politecnico di Torino, Turin, Italy; PoliTo(BIO)Med Lab, Politecnico di Torino, Turin, Italy.
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14
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Uncertainty Quantification in the In Vivo Image-Based Estimation of Local Elastic Properties of Vascular Walls. J Cardiovasc Dev Dis 2023; 10:jcdd10030109. [PMID: 36975873 PMCID: PMC10058982 DOI: 10.3390/jcdd10030109] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/03/2023] [Revised: 02/15/2023] [Accepted: 03/02/2023] [Indexed: 03/08/2023] Open
Abstract
Introduction: Patient-specific computational models are a powerful tool for planning cardiovascular interventions. However, the in vivo patient-specific mechanical properties of vessels represent a major source of uncertainty. In this study, we investigated the effect of uncertainty in the elastic module (E) on a Fluid–Structure Interaction (FSI) model of a patient-specific aorta. Methods: The image-based χ-method was used to compute the initial E value of the vascular wall. The uncertainty quantification was carried out using the generalized Polynomial Chaos (gPC) expansion technique. The stochastic analysis was based on four deterministic simulations considering four quadrature points. A deviation of about ±20% on the estimation of the E value was assumed. Results: The influence of the uncertain E parameter was evaluated along the cardiac cycle on area and flow variations extracted from five cross-sections of the aortic FSI model. Results of stochastic analysis showed the impact of E in the ascending aorta while an insignificant effect was observed in the descending tract. Conclusions: This study demonstrated the importance of the image-based methodology for inferring E, highlighting the feasibility of retrieving useful additional data and enhancing the reliability of in silico models in clinical practice.
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15
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Celi S, Gasparotti E, Capellini K, Bardi F, Scarpolini MA, Cavaliere C, Cademartiri F, Vignali E. An image-based approach for the estimation of arterial local stiffness in vivo. Front Bioeng Biotechnol 2023; 11:1096196. [PMID: 36793441 PMCID: PMC9923115 DOI: 10.3389/fbioe.2023.1096196] [Citation(s) in RCA: 4] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/11/2022] [Accepted: 01/19/2023] [Indexed: 01/31/2023] Open
Abstract
The analysis of mechanobiology of arterial tissues remains an important topic of research for cardiovascular pathologies evaluation. In the current state of the art, the gold standard to characterize the tissue mechanical behavior is represented by experimental tests, requiring the harvesting of ex-vivo specimens. In recent years though, image-based techniques for the in vivo estimation of arterial tissue stiffness were presented. The aim of this study is to define a new approach to provide local distribution of arterial stiffness, estimated as the linearized Young's Modulus, based on the knowledge of in vivo patient-specific imaging data. In particular, the strain and stress are estimated with sectional contour length ratios and a Laplace hypothesis/inverse engineering approach, respectively, and then used to calculate the Young's Modulus. After describing the method, this was validated by using a set of Finite Element simulations as input. In particular, idealized cylinder and elbow shapes plus a single patient-specific geometry were simulated. Different stiffness distributions were tested for the simulated patient-specific case. After the validation from Finite Element data, the method was then applied to patient-specific ECG-gated Computed Tomography data by also introducing a mesh morphing approach to map the aortic surface along the cardiac phases. The validation process revealed satisfactory results. In the simulated patient-specific case, root mean square percentage errors below 10% for the homogeneous distribution and below 20% for proximal/distal distribution of stiffness. The method was then successfully used on the three ECG-gated patient-specific cases. The resulting distributions of stiffness exhibited significant heterogeneity, nevertheless the resulting Young's moduli were always contained within the 1-3 MPa range, which is in line with literature.
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Affiliation(s)
- Simona Celi
- BioCardioLab, UOC Bioingegneria, Fondazione Toscana G Monasterio, Massa, Italy,*Correspondence: Simona Celi,
| | - Emanuele Gasparotti
- BioCardioLab, UOC Bioingegneria, Fondazione Toscana G Monasterio, Massa, Italy
| | - Katia Capellini
- BioCardioLab, UOC Bioingegneria, Fondazione Toscana G Monasterio, Massa, Italy
| | - Francesco Bardi
- BioCardioLab, UOC Bioingegneria, Fondazione Toscana G Monasterio, Massa, Italy,Mines Saint-Etienne, Universit’e de Lyon, INSERM, SaInBioSE U1059, Lyon, France
| | - Martino Andrea Scarpolini
- BioCardioLab, UOC Bioingegneria, Fondazione Toscana G Monasterio, Massa, Italy,Dipartimento di Ingegneria Industriale, Università “Tor Vergata”, Roma, Italy
| | | | | | - Emanuele Vignali
- BioCardioLab, UOC Bioingegneria, Fondazione Toscana G Monasterio, Massa, Italy
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16
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Antonuccio MN, Morales HG, This A, Capellini K, Avril S, Celi S, Rouet L. Towards the 2D velocity reconstruction in abdominal aorta from Color-Doppler Ultrasound. Med Eng Phys 2022; 107:103873. [DOI: 10.1016/j.medengphy.2022.103873] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/22/2022] [Revised: 08/02/2022] [Accepted: 08/05/2022] [Indexed: 10/16/2022]
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17
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The Hemodynamic Effect of Modified Blalock–Taussig Shunt Morphologies: A Computational Analysis Based on Reduced Order Modeling. ELECTRONICS 2022. [DOI: 10.3390/electronics11131930] [Citation(s) in RCA: 3] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 02/04/2023]
Abstract
The Modified Blalock Taussig Shunt (MBTS) is one of the most common palliative operations in case of cyanotic heart diseases. Thus far, the decision on the position, size, and geometry of the implant relies on clinicians’ experience. In this paper, a Medical Digital Twin pipeline based on reduced order modeling is presented for fast and interactive evaluation of the hemodynamic parameters of MBTS. An infant case affected by complete pulmonary atresia was selected for this study. A three-dimensional digital model of the infant’s MBTS morphology was generated. A wide spectrum of MBTS geometries was explored by introducing twelve Radial Basis Function mesh modifiers. The combination of these modifiers allowed for analysis of various MBTS shapes. The final results proved the potential of the proposed approach for the investigation of significant hemodynamic features such as velocity, pressure, and wall shear stress as a function of the shunt’s morphology in real-time. In particular, it was demonstrated that the modifications of the MBTS morphology had a profound effect on the hemodynamic indices. The adoption of reduced models turned out to be a promising path to follow for MBTS numerical evaluation, with the potential to support patient-specific preoperative planning.
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18
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A Decision-Support Informatics Platform for Minimally Invasive Aortic Valve Replacement. ELECTRONICS 2022. [DOI: 10.3390/electronics11121902] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 02/04/2023]
Abstract
Minimally invasive aortic valve replacement is performed by mini-sternotomy (MS) or less invasive right anterior mini-thoracotomy (RT). The possibility of adopting RT is assessed by anatomical criteria derived from manual 2D image analysis. We developed a semi-automatic tool (RT-PLAN) to assess the criteria of RT, extract other parameters of surgical interest and generate a view of the anatomical region in a 3D space. Twenty-five 3D CT images from a dataset were retrospectively evaluated. The methodology starts with segmentation to reconstruct 3D surface models of the aorta and anterior rib cage. Secondly, the RT criteria and geometric information from these models are automatically and quantitatively evaluated. A comparison is made between the values of the parameters measured by the standard manual 2D procedure and our tool. The RT-PLAN procedure was feasible in all cases. Strong agreement was found between RT-PLAN and the standard manual 2D procedure. There was no difference between the RT-PLAN and the standard procedure when selecting patients for the RT technique. The tool developed is able to effectively perform the assessment of the RT criteria, with the addition of a realistic visualisation of the surgical field through virtual reality technology.
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19
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Celi S, Vignali E, Capellini K, Gasparotti E. On the Role and Effects of Uncertainties in Cardiovascular in silico Analyses. FRONTIERS IN MEDICAL TECHNOLOGY 2022; 3:748908. [PMID: 35047960 PMCID: PMC8757785 DOI: 10.3389/fmedt.2021.748908] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/28/2021] [Accepted: 10/14/2021] [Indexed: 12/13/2022] Open
Abstract
The assessment of cardiovascular hemodynamics with computational techniques is establishing its fundamental contribution within the world of modern clinics. Great research interest was focused on the aortic vessel. The study of aortic flow, pressure, and stresses is at the basis of the understanding of complex pathologies such as aneurysms. Nevertheless, the computational approaches are still affected by sources of errors and uncertainties. These phenomena occur at different levels of the computational analysis, and they also strongly depend on the type of approach adopted. With the current study, the effect of error sources was characterized for an aortic case. In particular, the geometry of a patient-specific aorta structure was segmented at different phases of a cardiac cycle to be adopted in a computational analysis. Different levels of surface smoothing were imposed to define their influence on the numerical results. After this, three different simulation methods were imposed on the same geometry: a rigid wall computational fluid dynamics (CFD), a moving-wall CFD based on radial basis functions (RBF) CFD, and a fluid-structure interaction (FSI) simulation. The differences of the implemented methods were defined in terms of wall shear stress (WSS) analysis. In particular, for all the cases reported, the systolic WSS and the time-averaged WSS (TAWSS) were defined.
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Affiliation(s)
- Simona Celi
- BioCardioLab, UOC Bioingegneria, Fondazione Toscana Gabriele Monasterio, Massa, Italy
| | - Emanuele Vignali
- BioCardioLab, UOC Bioingegneria, Fondazione Toscana Gabriele Monasterio, Massa, Italy
| | - Katia Capellini
- BioCardioLab, UOC Bioingegneria, Fondazione Toscana Gabriele Monasterio, Massa, Italy.,Department of Information Engineering, University of Pisa, Pisa, Italy
| | - Emanuele Gasparotti
- BioCardioLab, UOC Bioingegneria, Fondazione Toscana Gabriele Monasterio, Massa, Italy.,Department of Information Engineering, University of Pisa, Pisa, Italy
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20
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Atlas-Based Evaluation of Hemodynamic in Ascending Thoracic Aortic Aneurysms. APPLIED SCIENCES-BASEL 2021. [DOI: 10.3390/app12010394] [Citation(s) in RCA: 5] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 11/17/2022]
Abstract
Atlas-based analyses of patients with cardiovascular diseases have recently been explored to understand the mechanistic link between shape and pathophysiology. The construction of probabilistic atlases is based on statistical shape modeling (SSM) to assess key anatomic features for a given patient population. Such an approach is relevant to study the complex nature of the ascending thoracic aortic aneurysm (ATAA) as characterized by different patterns of aortic shapes and valve phenotypes. This study was carried out to develop an SSM of the dilated aorta with both bicuspid aortic valve (BAV) and tricuspid aortic valve (TAV), and then assess the computational hemodynamic of virtual models obtained by the deformation of the mean template for specific shape boundaries (i.e., ±1.5 standard deviation, σ). Simulations demonstrated remarkable changes in the velocity streamlines, blood pressure, and fluid shear stress with the principal shape modes such as the aortic size (Mode 1), vessel tortuosity (Mode 2), and aortic valve morphologies (Mode 3). The atlas-based disease assessment can represent a powerful tool to reveal important insights on ATAA-derived hemodynamic, especially for aneurysms which are considered to have borderline anatomies, and thus challenging decision-making. The utilization of SSMs for creating probabilistic patient cohorts can facilitate the understanding of the heterogenous nature of the dilated ascending aorta.
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21
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Vignali E, Gasparotti E, Celi S, Avril S. Fully-Coupled FSI Computational Analyses in the Ascending Thoracic Aorta Using Patient-Specific Conditions and Anisotropic Material Properties. Front Physiol 2021; 12:732561. [PMID: 34744774 PMCID: PMC8564074 DOI: 10.3389/fphys.2021.732561] [Citation(s) in RCA: 4] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/29/2021] [Accepted: 09/17/2021] [Indexed: 12/27/2022] Open
Abstract
Computational hemodynamics has become increasingly important within the context of precision medicine, providing major insight in cardiovascular pathologies. However, finding appropriate compromise between speed and accuracy remains challenging in computational hemodynamics for an extensive use in decision making. For example, in the ascending thoracic aorta, interactions between the blood and the aortic wall must be taken into account for the sake of accuracy, but these fluid structure interactions (FSI) induce significant computational costs, especially when the tissue exhibits a hyperelastic and anisotropic response. The objective of the current study is to use the Small On Large (SOL) theory to linearize the anisotropic hyperelastic behavior in order to propose a reduced-order model for FSI simulations of the aorta. The SOL method is tested for fully-coupled FSI simulations in a patient-specific aortic geometry presenting an Ascending Thoracic Aortic Aneurysm (aTAA). The same model is also simulated with a fully-coupled FSI with non-linear material behavior, without SOL linearization. Eventually, the results and computational times with and without the SOL are compared. The SOL approach is demonstrated to provide a significant reduction of computational costs for FSI analysis in the aTAA, and the results in terms of stress state distribution are comparable. The method is implemented in ANSYS and will be further evaluated for clinical applications.
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Affiliation(s)
- Emanuele Vignali
- BioCardioLab, UOC Bioingegneria, Fondazione Toscana Gabriele Monasterio, Massa, Italy
| | - Emanuele Gasparotti
- BioCardioLab, UOC Bioingegneria, Fondazione Toscana Gabriele Monasterio, Massa, Italy
| | - Simona Celi
- BioCardioLab, UOC Bioingegneria, Fondazione Toscana Gabriele Monasterio, Massa, Italy
| | - Stéphane Avril
- Mines Saint-Etienne, Université de Lyon, INSERM, SaInBioSE U1059, Saint-Étienne, France
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22
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Celi S, Gasparotti E, Capellini K, Vignali E, Fanni BM, Ali LA, Cantinotti M, Murzi M, Berti S, Santoro G, Positano V. 3D Printing in Modern Cardiology. Curr Pharm Des 2021; 27:1918-1930. [PMID: 32568014 DOI: 10.2174/1381612826666200622132440] [Citation(s) in RCA: 12] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/16/2020] [Accepted: 05/05/2020] [Indexed: 11/22/2022]
Abstract
BACKGROUND 3D printing represents an emerging technology in the field of cardiovascular medicine. 3D printing can help to perform a better analysis of complex anatomies to optimize intervention planning. METHODS A systematic review was performed to illustrate the 3D printing technology and to describe the workflow to obtain 3D printed models from patient-specific images. Examples from our laboratory of the benefit of 3D printing in planning interventions were also reported. RESULTS 3D printing technique is reliable when applied to high-quality 3D image data (CTA, CMR, 3D echography), but it still needs the involvement of expert operators for image segmentation and mesh refinement. 3D printed models could be useful in interventional planning, although prospective studies with comprehensive and clinically meaningful endpoints are required to demonstrate the clinical utility. CONCLUSION 3D printing can be used to improve anatomy understanding and surgical planning.
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Affiliation(s)
- Simona Celi
- BioCardioLab, Fondazione Toscana "G. Monasterio", Massa, Italy
| | | | - Katia Capellini
- BioCardioLab, Fondazione Toscana "G. Monasterio", Massa, Italy
| | | | - Benigno M Fanni
- BioCardioLab, Fondazione Toscana "G. Monasterio", Massa, Italy
| | - Lamia A Ali
- Pediatric Cardiology Unit, Fondazione Toscana "G. Monasterio" Massa, Italy
| | | | - Michele Murzi
- Adult Cardiosurgery Unit, Fondazione Toscana "G. Monasterio", Massa, Italy
| | - Sergio Berti
- Adult Interventional Cardiology Unit, Fondazione Toscana "G. Monasterio", Massa, Italy
| | - Giuseppe Santoro
- Pediatric Cardiology Unit, Fondazione Toscana "G. Monasterio" Massa, Italy
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23
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Xu F, Kenjereš S. Numerical simulations of flow patterns in the human left ventricle model with a novel dynamic mesh morphing approach based on radial basis function. Comput Biol Med 2021; 130:104184. [PMID: 33444850 DOI: 10.1016/j.compbiomed.2020.104184] [Citation(s) in RCA: 4] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/25/2020] [Revised: 12/15/2020] [Accepted: 12/15/2020] [Indexed: 10/22/2022]
Abstract
We present a new numerical simulation framework for prediction of flow patterns in the human left ventricle model. In this study, a radial basis function (RBF) mesh morphing method is developed and applied within the finite-volume computational fluid dynamics (CFD) approach. The numerical simulations are designed to closely mimic details of recent tomographic particle image velocimetry (TomoPIV) experiments. The numerically simulated dynamic motions of the left ventricle and tri-leaflet biological mitral valve are emulated through the RBF morphing method. The arbitrary Lagrangian-Eulerian (ALE) based CFD is performed with the RBF-defined deforming wall boundaries. The results obtained show a good agreement with experiments, confirming the reliability and accuracy of the developed simulation framework.
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Affiliation(s)
- Fei Xu
- Department of Chemical Engineering, Faculty of Applied Sciences, Delft University of Technology and J. M. Burgerscentrum Research School for Fluid Mechanics, Van der Maasweg 9, 2629 HZ, Delft, the Netherlands
| | - Saša Kenjereš
- Department of Chemical Engineering, Faculty of Applied Sciences, Delft University of Technology and J. M. Burgerscentrum Research School for Fluid Mechanics, Van der Maasweg 9, 2629 HZ, Delft, the Netherlands.
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24
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Vignali E, di Bartolo F, Gasparotti E, Malacarne A, Concistré G, Chiaramonti F, Murzi M, Positano V, Landini L, Celi S. Correlation between micro and macrostructural biaxial behavior of ascending thoracic aneurysm: a novel experimental technique. Med Eng Phys 2020; 86:78-85. [PMID: 33261737 DOI: 10.1016/j.medengphy.2020.10.012] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/15/2020] [Revised: 10/01/2020] [Accepted: 10/21/2020] [Indexed: 02/08/2023]
Abstract
Mechanical properties and microstructural modifications of vessel tissues are strongly linked, as established in the state of the art of cardiovascular diseases. Techniques to obtain both mechanical and structural information are reported, but the possibility to obtain real-time microstructural and macrostructural data correlated is still lacking. An experimental approach to characterize the aortic tissue is presented. A setup integrating biaxial traction and Small Angle Light Scattering (SALS) analysis is described. The system was adopted to test ex-vivo aorta specimens from healthy and aneusymatic (aTAA) cases. A significant variation of the fiber dispersion with respect to the unloaded state was encountered during the material traction. The corresponding microstructural and mechanical data were successfully used to fit a given anisotropic constitutive model, with satisfactory R2 values (0.97±0.11 and 0.96±0.17, for aTAA and healthy population, respectively) and fiber dispersion parameters variations between the aTAA and healthy populations (0.39±0.23 and 0.15±0.10). The method integrating the biaxial/SALS technique was validated, allowing for real-time synchronization between mechanical and microstructural analysis of anisotropic biological tissues.
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Affiliation(s)
- Emanuele Vignali
- BioCardioLab, Ospedale del Cuore, Fondazione Toscana G. Monasterio, Massa, Italy; Department of Information Engineering, University of Pisa, Pisa, Italy
| | - Francesco di Bartolo
- BioCardioLab, Ospedale del Cuore, Fondazione Toscana G. Monasterio, Massa, Italy; Department of Information Engineering, University of Pisa, Pisa, Italy
| | - Emanuele Gasparotti
- BioCardioLab, Ospedale del Cuore, Fondazione Toscana G. Monasterio, Massa, Italy; Department of Information Engineering, University of Pisa, Pisa, Italy
| | | | - Giovanni Concistré
- Adult Cardiosurgery Unit, Ospedale del Cuore, Fondazione Toscana Gabriele Monasterio, Massa, Italy
| | - Francesca Chiaramonti
- Adult Cardiosurgery Unit, Ospedale del Cuore, Fondazione Toscana Gabriele Monasterio, Massa, Italy
| | - Michele Murzi
- Adult Cardiosurgery Unit, Ospedale del Cuore, Fondazione Toscana Gabriele Monasterio, Massa, Italy
| | - Vincenzo Positano
- BioCardioLab, Ospedale del Cuore, Fondazione Toscana G. Monasterio, Massa, Italy
| | - Luigi Landini
- Department of Information Engineering, University of Pisa, Pisa, Italy
| | - Simona Celi
- BioCardioLab, Ospedale del Cuore, Fondazione Toscana G. Monasterio, Massa, Italy.
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25
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Capellini K, Gasparotti E, Cella U, Costa E, Fanni BM, Groth C, Porziani S, Biancolini ME, Celi S. A novel formulation for the study of the ascending aortic fluid dynamics with in vivo data. Med Eng Phys 2020; 91:68-78. [PMID: 33008714 DOI: 10.1016/j.medengphy.2020.09.005] [Citation(s) in RCA: 16] [Impact Index Per Article: 3.2] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/17/2020] [Revised: 08/20/2020] [Accepted: 09/12/2020] [Indexed: 01/18/2023]
Abstract
Numerical simulations to evaluate thoracic aortic hemodynamics include a computational fluid dynamic (CFD) approach or fluid-structure interaction (FSI) approach. While CFD neglects the arterial deformation along the cardiac cycle by applying a rigid wall simplification, on the other side the FSI simulation requires a lot of assumptions for the material properties definition and high computational costs. The aim of this study is to investigate the feasibility of a new strategy, based on Radial Basis Functions (RBF) mesh morphing technique and transient simulations, able to introduce the patient-specific changes in aortic geometry during the cardiac cycle. Starting from medical images, aorta models at different phases of cardiac cycle were reconstructed and a transient shape deformation was obtained by proper activating incremental RBF solutions during the simulation process. The results, in terms of main hemodynamic parameters, were compared with two performed CFD simulations for the aortic model at minimum and maximum volume. Our implemented strategy copes the actual arterial variation during cardiac cycle with high accuracy, capturing the impact of geometrical variations on fluid dynamics, overcoming the complexity of a standard FSI approach.
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Affiliation(s)
- Katia Capellini
- BioCardioLab, Fondazione Toscana Gabriele Monasterio, Massa, Italy; Department of Information Engineering, University of Pisa, Pisa, Italy
| | - Emanuele Gasparotti
- BioCardioLab, Fondazione Toscana Gabriele Monasterio, Massa, Italy; Department of Information Engineering, University of Pisa, Pisa, Italy
| | - Ubaldo Cella
- Department of Enterprise Engineering, University of Rome Tor Vergata, Rome, Italy
| | | | - Benigno Marco Fanni
- BioCardioLab, Fondazione Toscana Gabriele Monasterio, Massa, Italy; Department of Information Engineering, University of Pisa, Pisa, Italy
| | - Corrado Groth
- Department of Enterprise Engineering, University of Rome Tor Vergata, Rome, Italy
| | - Stefano Porziani
- Department of Enterprise Engineering, University of Rome Tor Vergata, Rome, Italy
| | | | - Simona Celi
- BioCardioLab, Fondazione Toscana Gabriele Monasterio, Massa, Italy.
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26
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Fanni BM, Sauvage E, Celi S, Norman W, Vignali E, Landini L, Schievano S, Positano V, Capelli C. A Proof of Concept of a Non-Invasive Image-Based Material Characterization Method for Enhanced Patient-Specific Computational Modeling. Cardiovasc Eng Technol 2020; 11:532-543. [PMID: 32748364 DOI: 10.1007/s13239-020-00479-7] [Citation(s) in RCA: 7] [Impact Index Per Article: 1.4] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Submit a Manuscript] [Subscribe] [Scholar Register] [Received: 08/01/2019] [Accepted: 07/22/2020] [Indexed: 11/30/2022]
Abstract
PURPOSE Computational models of cardiovascular structures rely on their accurate mechanical characterization. A validated method able to infer the material properties of patient-specific large vessels is currently lacking. The aim of the present study is to present a technique starting from the flow-area (QA) method to retrieve basic material properties from magnetic resonance (MR) imaging. METHODS The proposed method was developed and tested, first, in silico and then in vitro. In silico, fluid-structure interaction (FSI) simulations of flow within a deformable pipe were run with varying elastic modules (E) between 0.5 and 32 MPa. The proposed QA-based formulation was assessed and modified based on the FSI results to retrieve E values. In vitro, a compliant phantom connected to a mock circulatory system was tested within MR scanning. Images of the phantom were acquired and post-processed according to the modified formulation to infer E of the phantom. Results of in vitro imaging assessment were verified against standard tensile test. RESULTS In silico results from FSI simulations were used to derive the correction factor to the original formulation based on the geometrical and material characteristics. In vitro, the modified QA-based equation estimated an average E = 0.51 MPa, 2% different from the E derived from tensile tests (i.e. E = 0.50 MPa). CONCLUSION This study presented promising results of an indirect and non-invasive method to establish elastic properties from solely MR images data, suggesting a potential image-based mechanical characterization of large blood vessels.
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Affiliation(s)
- B M Fanni
- BioCardioLab, Bioengineering Unit, Fondazione Toscana Gabriele Monasterio, Via Aurelia Sud, 54100, Massa, Italy.,Department of Information Engineering, University of Pisa, Via Girolamo Caruso 16, 56122, Pisa, Italy
| | - E Sauvage
- UCL Institute of Cardiovascular Science, 20c Guilford Street, London, WC1N 1DZ, UK.,Great Ormond Street Hospital for Children, NHS Foundation Trust, 30 Great Ormond Street, London, WC1N 3JH, UK
| | - S Celi
- BioCardioLab, Bioengineering Unit, Fondazione Toscana Gabriele Monasterio, Via Aurelia Sud, 54100, Massa, Italy.
| | - W Norman
- UCL Institute of Cardiovascular Science, 20c Guilford Street, London, WC1N 1DZ, UK.,Great Ormond Street Hospital for Children, NHS Foundation Trust, 30 Great Ormond Street, London, WC1N 3JH, UK
| | - E Vignali
- BioCardioLab, Bioengineering Unit, Fondazione Toscana Gabriele Monasterio, Via Aurelia Sud, 54100, Massa, Italy.,Department of Information Engineering, University of Pisa, Via Girolamo Caruso 16, 56122, Pisa, Italy
| | - L Landini
- BioCardioLab, Bioengineering Unit, Fondazione Toscana Gabriele Monasterio, Via Aurelia Sud, 54100, Massa, Italy.,Department of Information Engineering, University of Pisa, Via Girolamo Caruso 16, 56122, Pisa, Italy
| | - S Schievano
- UCL Institute of Cardiovascular Science, 20c Guilford Street, London, WC1N 1DZ, UK.,Great Ormond Street Hospital for Children, NHS Foundation Trust, 30 Great Ormond Street, London, WC1N 3JH, UK
| | - V Positano
- BioCardioLab, Bioengineering Unit, Fondazione Toscana Gabriele Monasterio, Via Aurelia Sud, 54100, Massa, Italy
| | - C Capelli
- UCL Institute of Cardiovascular Science, 20c Guilford Street, London, WC1N 1DZ, UK.,Great Ormond Street Hospital for Children, NHS Foundation Trust, 30 Great Ormond Street, London, WC1N 3JH, UK
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27
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Cebull HL, Rayz VL, Goergen CJ. Recent Advances in Biomechanical Characterization of Thoracic Aortic Aneurysms. Front Cardiovasc Med 2020; 7:75. [PMID: 32478096 PMCID: PMC7235347 DOI: 10.3389/fcvm.2020.00075] [Citation(s) in RCA: 25] [Impact Index Per Article: 5.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/20/2019] [Accepted: 04/14/2020] [Indexed: 12/18/2022] Open
Abstract
Thoracic aortic aneurysm (TAA) is a focal enlargement of the thoracic aorta, but the etiology of this disease is not fully understood. Previous work suggests that various genetic syndromes, congenital defects such as bicuspid aortic valve, hypertension, and age are associated with TAA formation. Though occurrence of TAAs is rare, they can be life-threatening when dissection or rupture occurs. Prevention of these adverse events often requires surgical intervention through full aortic root replacement or implantation of endovascular stent grafts. Currently, aneurysm diameters and expansion rates are used to determine if intervention is warranted. Unfortunately, this approach oversimplifies the complex aortopathy. Improving treatment of TAAs will likely require an increased understanding of the biological and biomechanical factors contributing to the disease. Past studies have substantially contributed to our knowledge of TAAs using various ex vivo, in vivo, and computational methods to biomechanically characterize the thoracic aorta. However, any singular approach typically focuses on only material properties of the aortic wall, intra-aneurysmal hemodynamics, or in vivo vessel dynamics, neglecting combinatorial factors that influence aneurysm development and progression. In this review, we briefly summarize the current understanding of TAA causes, treatment, and progression, before discussing recent advances in biomechanical studies of TAAs and possible future directions. We identify the need for comprehensive approaches that combine multiple characterization methods to study the mechanisms contributing to focal weakening and rupture. We hope this summary and analysis will inspire future studies leading to improved prediction of thoracic aneurysm progression and rupture, improving patient diagnoses and outcomes.
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Affiliation(s)
- Hannah L Cebull
- Weldon School of Biomedical Engineering, Purdue University, West Lafayette, IN, United States
| | - Vitaliy L Rayz
- Weldon School of Biomedical Engineering, Purdue University, West Lafayette, IN, United States
| | - Craig J Goergen
- Weldon School of Biomedical Engineering, Purdue University, West Lafayette, IN, United States.,Purdue Center for Cancer Research, Purdue University, West Lafayette, IN, United States
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28
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Statistical Shape Analysis of Ascending Thoracic Aortic Aneurysm: Correlation between Shape and Biomechanical Descriptors. J Pers Med 2020; 10:jpm10020028. [PMID: 32331429 PMCID: PMC7354467 DOI: 10.3390/jpm10020028] [Citation(s) in RCA: 11] [Impact Index Per Article: 2.2] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/06/2020] [Revised: 04/14/2020] [Accepted: 04/17/2020] [Indexed: 12/21/2022] Open
Abstract
An ascending thoracic aortic aneurysm (ATAA) is a heterogeneous disease showing different patterns of aortic dilatation and valve morphologies, each with distinct clinical course. This study aimed to explore the aortic morphology and the associations between shape and function in a population of ATAA, while further assessing novel risk models of aortic surgery not based on aortic size. Shape variability of n = 106 patients with ATAA and different valve morphologies (i.e., bicuspid versus tricuspid aortic valve) was estimated by statistical shape analysis (SSA) to compute a mean aortic shape and its deformation. Once the computational atlas was built, principal component analysis (PCA) allowed to reduce the complex ATAA anatomy to a few shape modes, which were correlated to shear stress and aortic strain, as determined by computational analysis. Findings demonstrated that shape modes are associated to specific morphological features of aneurysmal aorta as the vessel tortuosity and local bulging of the ATAA. A predictive model, built with principal shape modes of the ATAA wall, achieved better performance in stratifying surgically operated ATAAs versus monitored ATAAs, with respect to a baseline model using the maximum aortic diameter. Using current imaging resources, this study demonstrated the potential of SSA to investigate the association between shape and function in ATAAs, with the goal of developing a personalized approach for the treatment of the severity of aneurysmal aorta.
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30
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Correlation between LAA Morphological Features and Computational Fluid Dynamics Analysis for Non-Valvular Atrial Fibrillation Patients. APPLIED SCIENCES-BASEL 2020. [DOI: 10.3390/app10041448] [Citation(s) in RCA: 14] [Impact Index Per Article: 2.8] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 11/16/2022]
Abstract
The left atrial appendage (LAA) is a complex cardiovascular structure which can yield to thrombi formation in patients with non-valvular atrial fibrillation (AF). The study of LAA fluid dynamics together with morphological features should be investigated in order to evaluate the possible connection of geometrical and hemodynamics indices with the stroke risk. To reach this goal, we conducted a morphological analysis of four different LAA shapes considering their variation during the cardiac cycle and computational fluid dynamics (CFD) simulations in AF conditions were carried out. The analysis of main geometrical LAA parameters showed a huger ostium and a reduced motility for the cauliflower and cactus shapes, as well as a lower velocity values from the CFD analysis. Such findings are in line with literature and highlight the importance of coupling dynamics imaging data with CFD calculations for providing information not available at clinical level.
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31
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Vignali E, Gasparotti E, Fanni BM, Ait-Ali L, Positano V, Landini L, Celi S. Development of a Fully Controllable Real-Time Pump to Reproduce Left Ventricle Physiological Flow. LECTURE NOTES IN MECHANICAL ENGINEERING 2020. [DOI: 10.1007/978-3-030-41057-5_74] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 01/12/2023]
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32
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Advanced Radial Basis Functions Mesh Morphing for High Fidelity Fluid-Structure Interaction with Known Movement of the Walls: Simulation of an Aortic Valve. LECTURE NOTES IN COMPUTER SCIENCE 2020. [PMCID: PMC7304714 DOI: 10.1007/978-3-030-50433-5_22] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Indexed: 11/08/2022]
Abstract
High fidelity Fluid-Structure Interaction (FSI) can be tackled by means of non-linear Finite Element Models (FEM) suitable to capture large deflections of structural parts interacting with fluids and by means of detailed Computational Fluid Dynamics (CFD). High fidelity is gained thanks to the spatial resolution of the computational grids and a key enabler to have a proper exchange of information between the structural solver and the fluid one is the management of the interfaces. A class of applications consists in problems where the complex movement of the walls is known in advance or can be computed by FEM and has to be transferred to the CFD solver. The aforementioned approach, known also as one-way FSI, requires effective methods for the time marching adaption of the computation grid of the CFD model. A versatile and well established approach consists in a continuum update of the mesh that is regenerated so to fit the evolution of the moving walls. In this study, an innovative method based on Radial Basis Functions (RBF) mesh morphing is proposed, allowing to keep the same mesh topology suitable for a continuum update of the shape. A set of key configurations are exactly guaranteed whilst time interpolation is adopted between frames. The new framework is detailed and then demonstrated, adopting as a reference the established approach based on remeshing, for the study of a Polymeric-Prosthetic Heart Valve (P-PHV).
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Marconi S, Negrello E, Mauri V, Pugliese L, Peri A, Argenti F, Auricchio F, Pietrabissa A. Toward the improvement of 3D-printed vessels' anatomical models for robotic surgery training. Int J Artif Organs 2019; 42:558-565. [PMID: 31170878 DOI: 10.1177/0391398819852957] [Citation(s) in RCA: 9] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/11/2022]
Abstract
Multi-Detector Computed Tomography is nowadays the gold standard for the pre-operative imaging for several surgical interventions, thanks to its excellent morphological definition. As for vascular structures, only the blood flowing inside vessels can be highlighted, while vessels' wall remains mostly invisible. Image segmentation and three-dimensional-printing technology can be used to create physical replica of patient-specific anatomy, to be used for the training of novice surgeons in robotic surgery. To this aim, it is fundamental that the model correctly resembles the morphological properties of the structure of interest, especially concerning vessels on which crucial operations are performed during the intervention. To reach the goal, vessels' actual size must be restored, including information on their wall. Starting from the correlation between vessels' lumen diameter and their wall thickness, we developed a semi-automatic approach to compute the local vessels' wall, bringing the vascular structures as close as possible to their actual size. The optimized virtual models are suitable for manufacturing by means of three-dimensional-printing technology to build patient-specific phantoms for the surgical simulation of robotic abdominal interventions. The proposed approach can effectively lead to the generation of vascular models of optimized thickness wall. The feasibility of the approach is also tested on a selection of clinical cases in abdominal surgery, on which the robotic surgery is performed on the three-dimensional-printed replica before the actual intervention.
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Affiliation(s)
- S Marconi
- Dipartimento di Ingegneria Civile e Architettura, Università di Pavia, Pavia, Italy
| | - E Negrello
- Fondazione I.R.C.C.S. Policlinico San Matteo, Pavia, Italy
| | - V Mauri
- Fondazione I.R.C.C.S. Policlinico San Matteo, Pavia, Italy
| | - L Pugliese
- Fondazione I.R.C.C.S. Policlinico San Matteo, Pavia, Italy
| | - A Peri
- Fondazione I.R.C.C.S. Policlinico San Matteo, Pavia, Italy
| | - F Argenti
- Fondazione I.R.C.C.S. Policlinico San Matteo, Pavia, Italy
| | - F Auricchio
- Dipartimento di Ingegneria Civile e Architettura, Università di Pavia, Pavia, Italy
| | - A Pietrabissa
- Fondazione I.R.C.C.S. Policlinico San Matteo, Pavia, Italy.,Dipartimento di Scienze Clinico-Chirurgiche, Diagnostiche e Pediatriche, Università di Pavia, Pavia, Italy
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Pewowaruk R, Roldán-Alzate A. 4D Flow MRI Estimation of Boundary Conditions for Patient Specific Cardiovascular Simulation. Ann Biomed Eng 2019; 47:1786-1798. [PMID: 31069584 DOI: 10.1007/s10439-019-02285-2] [Citation(s) in RCA: 8] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/29/2019] [Accepted: 05/02/2019] [Indexed: 12/11/2022]
Abstract
Accurate image based cardiovascular simulations require patient specific boundary conditions (BCs) for inlets, outlets and vessel wall mechanical properties. While inlet BCs are typically determined non-invasively, invasive pressure catheterization is often used to determine patient specific outlet BCs and vessel wall mechanical properties. A method using 4D Flow MRI to non-invasively determine both patient specific outlet BCs and vessel wall mechanical properties is presented and results for both in vitro validation with a latex tube and an in vivo pulmonary artery stenosis (PAS) stent intervention are presented. For in vitro validation, acceptable agreement is found between simulation using BCs from 4D Flow MRI and benchtop measurements. For the PAS virtual intervention, simulation correctly predicts flow distribution with 9% error compared to MRI. Using 4D Flow MRI to noninvasively determine patient specific BCs increases the ability to use image based simulations as pressure catheterization is not always performed.
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Affiliation(s)
- Ryan Pewowaruk
- Biomedical Engineering, University of Wisconsin - Madison, 1111 Highland Ave, Room 2476 WIMR 2, Madison, WI, 53705, USA
| | - Alejandro Roldán-Alzate
- Biomedical Engineering, University of Wisconsin - Madison, 1111 Highland Ave, Room 2476 WIMR 2, Madison, WI, 53705, USA. .,Mechanical Engineering, University of Wisconsin - Madison, 1111 Highland Ave, Room 2476 WIMR 2, Madison, WI, 53705, USA. .,Department of Radiology, University of Wisconsin - Madison, 1111 Highland Ave, Room 2476 WIMR 2, Madison, WI, 53705, USA.
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35
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Landini L. The Future of Medical Imaging. Curr Pharm Des 2019; 24:5487-5488. [DOI: 10.2174/138161282446190426115124] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/22/2022]
Affiliation(s)
- Luigi Landini
- Department of Information Engineering, University of Pisa, 56126 Pisa, Italy; Fondazione G. Monasterio, CNR-Regione Toscana, Via Moruzzi 1, 56124 Pisa, Italy
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36
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Boccadifuoco A, Mariotti A, Capellini K, Celi S, Salvetti MV. Validation of Numerical Simulations of Thoracic Aorta Hemodynamics: Comparison with In Vivo Measurements and Stochastic Sensitivity Analysis. Cardiovasc Eng Technol 2018; 9:688-706. [DOI: 10.1007/s13239-018-00387-x] [Citation(s) in RCA: 24] [Impact Index Per Article: 3.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Submit a Manuscript] [Subscribe] [Scholar Register] [Received: 06/13/2018] [Accepted: 10/11/2018] [Indexed: 10/28/2022]
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