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For: Kroukamp O, Wolfaardt GM. CO2 production as an indicator of biofilm metabolism. Appl Environ Microbiol 2009;75:4391-7. [PMID: 19346353 DOI: 10.1128/AEM.01567-08] [Citation(s) in RCA: 34] [Impact Index Per Article: 2.1] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/20/2022]  Open
Number Cited by Other Article(s)
1
Klopper KB, Bester E, van Schalkwyk M, Wolfaardt GM. Mixed species biofilms act as planktonic cell factories despite isothiazolinone exposure under continuous-flow conditions. ENVIRONMENTAL MICROBIOLOGY REPORTS 2024;16:e70010. [PMID: 39351641 PMCID: PMC11443163 DOI: 10.1111/1758-2229.70010] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 05/23/2024] [Accepted: 08/30/2024] [Indexed: 10/04/2024]
2
Hu S, Zhang Y, Meng H, Yang Y, Chen G, Wang Q, Cheng K, Guo C, Li X, Liu T. Transformation and migration of Hg in a polluted alkaline paddy soil during flooding and drainage processes. ENVIRONMENTAL POLLUTION (BARKING, ESSEX : 1987) 2024;345:123471. [PMID: 38336140 DOI: 10.1016/j.envpol.2024.123471] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 11/08/2023] [Revised: 01/14/2024] [Accepted: 01/29/2024] [Indexed: 02/12/2024]
3
Klopper KB, Bester E, van Schalkwyk M, Wolfaardt GM. Highlighting the limitations of static microplate biofilm assays for industrial biocide effectiveness compared to dynamic flow conditions. ENVIRONMENTAL MICROBIOLOGY REPORTS 2024;16:e13214. [PMID: 38015101 PMCID: PMC10866068 DOI: 10.1111/1758-2229.13214] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 06/11/2023] [Accepted: 11/01/2023] [Indexed: 11/29/2023]
4
Klopper KB, Bester E, Wolfaardt GM. Listeria monocytogenes Biofilms Are Planktonic Cell Factories despite Peracetic Acid Exposure under Continuous Flow Conditions. Antibiotics (Basel) 2023;12:antibiotics12020209. [PMID: 36830120 PMCID: PMC9952409 DOI: 10.3390/antibiotics12020209] [Citation(s) in RCA: 4] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/14/2022] [Revised: 01/07/2023] [Accepted: 01/16/2023] [Indexed: 01/21/2023]  Open
5
Ronan E, Kroukamp O, Liss SN, Wolfaardt G. Evaluating CO2 emissions from continuous flow and batch growth systems under autotrophic mode: Implications for GHG accounting of biological nutrient removal. JOURNAL OF ENVIRONMENTAL MANAGEMENT 2021;294:112928. [PMID: 34116306 DOI: 10.1016/j.jenvman.2021.112928] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 11/22/2020] [Revised: 04/15/2021] [Accepted: 05/06/2021] [Indexed: 06/12/2023]
6
Ronan P, Kroukamp O, Liss SN, Wolfaardt G. Interaction between CO2-consuming autotrophy and CO2-producing heterotrophy in non-axenic phototrophic biofilms. PLoS One 2021;16:e0253224. [PMID: 34129611 PMCID: PMC8205120 DOI: 10.1371/journal.pone.0253224] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/14/2021] [Accepted: 05/31/2021] [Indexed: 11/19/2022]  Open
7
Vashchenko AO, Voronkova YS, Kulyk EE, Snisar OS, Sidashenko OI, Voronkova OS. Influence of sugars on biofilm formation of Staphylococcus epidermidis. REGULATORY MECHANISMS IN BIOSYSTEMS 2021. [DOI: 10.15421/022143] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/05/2022]  Open
8
Stone W, Louw TM, Booysen MJ, Wolfaardt GM. Canary in the coliform mine: Exploring the industrial application limits of a microbial respiration alarm system. PLoS One 2021;16:e0247910. [PMID: 33661997 PMCID: PMC7932117 DOI: 10.1371/journal.pone.0247910] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/20/2020] [Accepted: 02/16/2021] [Indexed: 11/18/2022]  Open
9
Liew FJ, Schilling JS. High-efficiency methane capture by living fungi and dried fungal hyphae (necromass). JOURNAL OF ENVIRONMENTAL QUALITY 2020;49:1467-1476. [PMID: 33118202 DOI: 10.1002/jeq2.20136] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 02/13/2020] [Revised: 06/19/2020] [Accepted: 07/13/2020] [Indexed: 06/11/2023]
10
Klopper KB, de Witt RN, Bester E, Dicks LMT, Wolfaardt GM. Biofilm dynamics: linking in situ biofilm biomass and metabolic activity measurements in real-time under continuous flow conditions. NPJ Biofilms Microbiomes 2020;6:42. [PMID: 33087727 PMCID: PMC7578832 DOI: 10.1038/s41522-020-00153-9] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/25/2020] [Accepted: 09/21/2020] [Indexed: 12/26/2022]  Open
11
Ronan P, Kroukamp O, Liss SN, Wolfaardt G. A Novel System for Real-Time, In Situ Monitoring of CO2 Sequestration in Photoautotrophic Biofilms. Microorganisms 2020;8:microorganisms8081163. [PMID: 32751859 PMCID: PMC7464137 DOI: 10.3390/microorganisms8081163] [Citation(s) in RCA: 6] [Impact Index Per Article: 1.2] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/16/2020] [Revised: 07/09/2020] [Accepted: 07/24/2020] [Indexed: 01/26/2023]  Open
12
Brethauer S, Shahab RL, Studer MH. Impacts of biofilms on the conversion of cellulose. Appl Microbiol Biotechnol 2020;104:5201-5212. [PMID: 32337627 PMCID: PMC7275028 DOI: 10.1007/s00253-020-10595-y] [Citation(s) in RCA: 38] [Impact Index Per Article: 7.6] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/20/2019] [Revised: 03/24/2020] [Accepted: 03/31/2020] [Indexed: 12/02/2022]
13
Jackson LMD, Kroukamp O, Yeung WC, Ronan E, Liss SN, Wolfaardt GM. Species Interaction and Selective Carbon Addition During Antibiotic Exposure Enhances Bacterial Survival. Front Microbiol 2019;10:2730. [PMID: 31849882 PMCID: PMC6895500 DOI: 10.3389/fmicb.2019.02730] [Citation(s) in RCA: 6] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/31/2019] [Accepted: 11/11/2019] [Indexed: 12/28/2022]  Open
14
Jang H, Eom Y. Repurposing auranofin to combat uropathogenic Escherichia coli biofilms. J Appl Microbiol 2019;127:459-471. [DOI: 10.1111/jam.14312] [Citation(s) in RCA: 7] [Impact Index Per Article: 1.2] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/16/2019] [Revised: 04/27/2019] [Accepted: 05/10/2019] [Indexed: 12/29/2022]
15
Pousti M, Zarabadi MP, Abbaszadeh Amirdehi M, Paquet-Mercier F, Greener J. Microfluidic bioanalytical flow cells for biofilm studies: a review. Analyst 2019;144:68-86. [PMID: 30394455 DOI: 10.1039/c8an01526k] [Citation(s) in RCA: 49] [Impact Index Per Article: 8.2] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/21/2022]
16
Bordoloi A, Gostomski PA. Fate of degraded pollutants in waste gas biofiltration: An overview of carbon end-points. Biotechnol Adv 2018;37:579-588. [PMID: 30308222 DOI: 10.1016/j.biotechadv.2018.09.002] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/02/2017] [Revised: 09/07/2018] [Accepted: 09/11/2018] [Indexed: 10/28/2022]
17
Klopper KB, Bester E, Deane SM, Wolfaardt GM, Dicks LMT. Survival of Planktonic and Sessile Cells of Lactobacillus rhamnosus and Lactobacillus reuteri upon Exposure to Simulated Fasting-State Gastrointestinal Conditions. Probiotics Antimicrob Proteins 2018;11:594-603. [DOI: 10.1007/s12602-018-9426-7] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/11/2023]
18
Lirtsman V, Golosovsky M, Davidov D. Surface plasmon excitation using a Fourier-transform infrared spectrometer: Live cell and bacteria sensing. THE REVIEW OF SCIENTIFIC INSTRUMENTS 2017;88:103105. [PMID: 29092505 DOI: 10.1063/1.4997388] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/07/2023]
19
Stone W, Kroukamp O, Korber DR, McKelvie J, Wolfaardt GM. Microbes at Surface-Air Interfaces: The Metabolic Harnessing of Relative Humidity, Surface Hygroscopicity, and Oligotrophy for Resilience. Front Microbiol 2016;7:1563. [PMID: 27746774 PMCID: PMC5043023 DOI: 10.3389/fmicb.2016.01563] [Citation(s) in RCA: 13] [Impact Index Per Article: 1.4] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/24/2016] [Accepted: 09/20/2016] [Indexed: 12/25/2022]  Open
20
Silva CR, Oliveira E, Zagatto EA, Henriquez C. A novel flow-based procedure for automation of respirometric assays in soils. Talanta 2016;158:14-20. [DOI: 10.1016/j.talanta.2016.05.026] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/24/2016] [Revised: 05/06/2016] [Accepted: 05/10/2016] [Indexed: 11/16/2022]
21
Ronan E, Edjiu N, Kroukamp O, Wolfaardt G, Karshafian R. USMB-induced synergistic enhancement of aminoglycoside antibiotics in biofilms. ULTRASONICS 2016;69:182-190. [PMID: 27111871 DOI: 10.1016/j.ultras.2016.03.017] [Citation(s) in RCA: 19] [Impact Index Per Article: 2.1] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 09/08/2015] [Revised: 03/08/2016] [Accepted: 03/28/2016] [Indexed: 06/05/2023]
22
Measuring microbial metabolism in atypical environments: Bentonite in used nuclear fuel storage. J Microbiol Methods 2016;120:79-90. [DOI: 10.1016/j.mimet.2015.11.006] [Citation(s) in RCA: 24] [Impact Index Per Article: 2.7] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/22/2015] [Revised: 11/09/2015] [Accepted: 11/09/2015] [Indexed: 11/19/2022]
23
Jackson LMD, Kroukamp O, Wolfaardt GM. Effect of carbon on whole-biofilm metabolic response to high doses of streptomycin. Front Microbiol 2015;6:953. [PMID: 26441887 PMCID: PMC4566048 DOI: 10.3389/fmicb.2015.00953] [Citation(s) in RCA: 14] [Impact Index Per Article: 1.4] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/15/2015] [Accepted: 08/28/2015] [Indexed: 01/10/2023]  Open
24
Dumitrache A, Eberl HJ, Allen DG, Wolfaardt GM. Mathematical modeling to validate on-line CO2 measurements as a metric for cellulolytic biofilm activity in continuous-flow bioreactors. Biochem Eng J 2015. [DOI: 10.1016/j.bej.2015.04.022] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
25
Sousa AJ, Droppo IG, Liss SN, Warren L, Wolfaardt G. Influence of wave action on the partitioning and transport of unattached and floc-associated bacteria in fresh water. Can J Microbiol 2015;61:584-96. [PMID: 26168283 DOI: 10.1139/cjm-2014-0815] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/22/2022]
26
Martin NL, Bass P, Liss SN. Antibacterial Properties and Mechanism of Activity of a Novel Silver-Stabilized Hydrogen Peroxide. PLoS One 2015;10:e0131345. [PMID: 26154263 PMCID: PMC4496041 DOI: 10.1371/journal.pone.0131345] [Citation(s) in RCA: 18] [Impact Index Per Article: 1.8] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/02/2015] [Accepted: 06/01/2015] [Indexed: 11/18/2022]  Open
27
An Integrated Modeling and Experimental Approach to Study the Influence of Environmental Nutrients on Biofilm Formation of Pseudomonas aeruginosa. BIOMED RESEARCH INTERNATIONAL 2015;2015:506782. [PMID: 25954752 PMCID: PMC4411446 DOI: 10.1155/2015/506782] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 09/24/2014] [Accepted: 02/09/2015] [Indexed: 12/18/2022]
28
Dumitrache A, Wolfaardt GM, Allen DG, Liss SN, Lynd LR. Tracking the cellulolytic activity of Clostridium thermocellum biofilms. BIOTECHNOLOGY FOR BIOFUELS 2013;6:175. [PMID: 24286524 PMCID: PMC4176736 DOI: 10.1186/1754-6834-6-175] [Citation(s) in RCA: 10] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 07/11/2013] [Accepted: 10/02/2013] [Indexed: 05/10/2023]
29
Xu Z, Fang X, Wood TK, Huang ZJ. A systems-level approach for investigating Pseudomonas aeruginosa biofilm formation. PLoS One 2013;8:e57050. [PMID: 23451140 PMCID: PMC3579789 DOI: 10.1371/journal.pone.0057050] [Citation(s) in RCA: 27] [Impact Index Per Article: 2.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/16/2012] [Accepted: 01/16/2013] [Indexed: 12/14/2022]  Open
30
Cao B, Majors PD, Ahmed B, Renslow RS, Silvia CP, Shi L, Kjelleberg S, Fredrickson JK, Beyenal H. Biofilm shows spatially stratified metabolic responses to contaminant exposure. Environ Microbiol 2012;14:2901-10. [PMID: 22925136 DOI: 10.1111/j.1462-2920.2012.02850.x] [Citation(s) in RCA: 38] [Impact Index Per Article: 2.9] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/02/2012] [Revised: 07/16/2012] [Accepted: 07/21/2012] [Indexed: 11/29/2022]
31
Babauta JT, Nguyen HD, Harrington TD, Renslow R, Beyenal H. pH, redox potential and local biofilm potential microenvironments within Geobacter sulfurreducens biofilms and their roles in electron transfer. Biotechnol Bioeng 2012;109:2651-62. [PMID: 22549331 DOI: 10.1002/bit.24538] [Citation(s) in RCA: 80] [Impact Index Per Article: 6.2] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/25/2012] [Revised: 04/10/2012] [Accepted: 04/20/2012] [Indexed: 11/07/2022]
32
Bester E, Kroukamp O, Hausner M, Edwards E, Wolfaardt G. Biofilm form and function: carbon availability affects biofilm architecture, metabolic activity and planktonic cell yield. J Appl Microbiol 2010;110:387-98. [DOI: 10.1111/j.1365-2672.2010.04894.x] [Citation(s) in RCA: 29] [Impact Index Per Article: 1.9] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
33
Chao J, Wolfaardt GM, Arts MT. Characterization of Pseudomonas aeruginosa fatty acid profiles in biofilms and batch planktonic cultures. Can J Microbiol 2010;56:1028-39. [DOI: 10.1139/w10-093] [Citation(s) in RCA: 36] [Impact Index Per Article: 2.4] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/12/2023]
34
Pronounced effect of the nature of the inoculum on biofilm development in flow systems. Appl Environ Microbiol 2010;76:6025-31. [PMID: 20639376 DOI: 10.1128/aem.00070-10] [Citation(s) in RCA: 36] [Impact Index Per Article: 2.4] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/20/2022]  Open
35
Metabolic differentiation in biofilms as indicated by carbon dioxide production rates. Appl Environ Microbiol 2009;76:1189-97. [PMID: 20023078 DOI: 10.1128/aem.01719-09] [Citation(s) in RCA: 46] [Impact Index Per Article: 2.9] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/20/2022]  Open
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