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For: Tolli JD, Sievert SM, Taylor CD. Unexpected diversity of bacteria capable of carbon monoxide oxidation in a coastal marine environment, and contribution of the Roseobacter-associated clade to total CO oxidation. Appl Environ Microbiol 2006;72:1966-73. [PMID: 16517644 PMCID: PMC1393225 DOI: 10.1128/aem.72.3.1966-1973.2006] [Citation(s) in RCA: 43] [Impact Index Per Article: 2.3] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/20/2022]  Open
Number Cited by Other Article(s)
1
Kong Y, Zhang R, Blain S, Obernosterer I. Seasonal dynamics in microbial trace metals transporters during phytoplankton blooms in the Southern Ocean. Environ Microbiol 2024;26:e16695. [PMID: 39367538 DOI: 10.1111/1462-2920.16695] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/08/2024] [Accepted: 07/26/2024] [Indexed: 10/06/2024]
2
Liu Y, Brinkhoff T, Berger M, Poehlein A, Voget S, Paoli L, Sunagawa S, Amann R, Simon M. Metagenome-assembled genomes reveal greatly expanded taxonomic and functional diversification of the abundant marine Roseobacter RCA cluster. MICROBIOME 2023;11:265. [PMID: 38007474 PMCID: PMC10675870 DOI: 10.1186/s40168-023-01644-5] [Citation(s) in RCA: 5] [Impact Index Per Article: 2.5] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 06/12/2023] [Accepted: 08/07/2023] [Indexed: 11/27/2023]
3
Molecular hydrogen in seawater supports growth of diverse marine bacteria. Nat Microbiol 2023;8:581-595. [PMID: 36747116 DOI: 10.1038/s41564-023-01322-0] [Citation(s) in RCA: 22] [Impact Index Per Article: 11.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/26/2022] [Accepted: 01/05/2023] [Indexed: 02/08/2023]
4
Bacterial Community Assembly, Succession, and Metabolic Function during Outdoor Cultivation of Microchloropsis salina. mSphere 2022;7:e0023122. [PMID: 35730934 PMCID: PMC9429889 DOI: 10.1128/msphere.00231-22] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/23/2022]  Open
5
Khivantsev K, Jaegers NR, Aleksandrov HA, Kovarik L, Derewinski MA, Wang Y, Vayssilov GN, Szanyi J. Biomimetic CO oxidation below -100 °C by a nitrate-containing metal-free microporous system. Nat Commun 2021;12:6033. [PMID: 34654809 PMCID: PMC8519918 DOI: 10.1038/s41467-021-26157-3] [Citation(s) in RCA: 4] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/30/2020] [Accepted: 09/10/2021] [Indexed: 11/16/2022]  Open
6
Palmer JL, Hilton S, Picot E, Bending GD, Schäfer H. Tree phyllospheres are a habitat for diverse populations of CO-oxidizing bacteria. Environ Microbiol 2021;23:6309-6327. [PMID: 34523801 DOI: 10.1111/1462-2920.15770] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/14/2021] [Revised: 07/21/2021] [Accepted: 09/08/2021] [Indexed: 11/28/2022]
7
Liggan LM, Martone PT. Gas Composition of Developing Pneumatocysts in Bull Kelp Nereocystis luetkeana (Phaeophyceae)1. JOURNAL OF PHYCOLOGY 2020;56:1367-1372. [PMID: 32479662 DOI: 10.1111/jpy.13037] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 10/10/2019] [Accepted: 05/17/2020] [Indexed: 06/11/2023]
8
Kwon YS, Kang HW, Polimene L, Rhee TS. A marine carbon monoxide (CO) model with a new parameterization of microbial oxidation. Ecol Modell 2020. [DOI: 10.1016/j.ecolmodel.2020.109203] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/30/2022]
9
Giebel HA, Wolterink M, Brinkhoff T, Simon M. Complementary energy acquisition via aerobic anoxygenic photosynthesis and carbon monoxide oxidation by Planktomarina temperata of the Roseobacter group. FEMS Microbiol Ecol 2020;95:5437672. [PMID: 31055603 DOI: 10.1093/femsec/fiz050] [Citation(s) in RCA: 20] [Impact Index Per Article: 4.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/02/2018] [Accepted: 04/05/2019] [Indexed: 02/06/2023]  Open
10
Breider S, Sehar S, Berger M, Thomas T, Brinkhoff T, Egan S. Genome sequence of Epibacterium ulvae strain DSM 24752T, an indigoidine-producing, macroalga-associated member of the marine Roseobacter group. ENVIRONMENTAL MICROBIOME 2019;14:4. [PMID: 33902719 PMCID: PMC7989816 DOI: 10.1186/s40793-019-0343-5] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 02/27/2019] [Accepted: 07/08/2019] [Indexed: 06/12/2023]
11
Kieft B, Li Z, Bryson S, Crump BC, Hettich R, Pan C, Mayali X, Mueller RS. Microbial Community Structure-Function Relationships in Yaquina Bay Estuary Reveal Spatially Distinct Carbon and Nitrogen Cycling Capacities. Front Microbiol 2018;9:1282. [PMID: 29963029 PMCID: PMC6010575 DOI: 10.3389/fmicb.2018.01282] [Citation(s) in RCA: 30] [Impact Index Per Article: 4.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/09/2018] [Accepted: 05/25/2018] [Indexed: 12/11/2022]  Open
12
Esquivel-Elizondo S, Maldonado J, Krajmalnik-Brown R. Anaerobic carbon monoxide metabolism by Pleomorphomonas carboxyditropha sp. nov., a new mesophilic hydrogenogenic carboxydotroph. FEMS Microbiol Ecol 2018;94:4980905. [DOI: 10.1093/femsec/fiy056] [Citation(s) in RCA: 13] [Impact Index Per Article: 1.9] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/26/2018] [Accepted: 03/22/2018] [Indexed: 11/13/2022]  Open
13
Hou L, Sun J, Xie X, Jiao N, Zhang Y. Genome sequence of Acuticoccus yangtzensis JL1095T (DSM 28604T) isolated from the Yangtze Estuary. Stand Genomic Sci 2018;12:91. [PMID: 29299111 PMCID: PMC5747140 DOI: 10.1186/s40793-017-0295-6] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/12/2017] [Accepted: 12/05/2017] [Indexed: 01/31/2023]  Open
14
Simon M, Scheuner C, Meier-Kolthoff JP, Brinkhoff T, Wagner-Döbler I, Ulbrich M, Klenk HP, Schomburg D, Petersen J, Göker M. Phylogenomics of Rhodobacteraceae reveals evolutionary adaptation to marine and non-marine habitats. THE ISME JOURNAL 2017;11:1483-1499. [PMID: 28106881 PMCID: PMC5437341 DOI: 10.1038/ismej.2016.198] [Citation(s) in RCA: 225] [Impact Index Per Article: 28.1] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 08/02/2016] [Revised: 10/29/2016] [Accepted: 11/19/2016] [Indexed: 12/31/2022]
15
Riou V, Périot M, Biegala IC. Specificity Re-evaluation of Oligonucleotide Probes for the Detection of Marine Picoplankton by Tyramide Signal Amplification-Fluorescent In Situ Hybridization. Front Microbiol 2017;8:854. [PMID: 28611732 PMCID: PMC5446981 DOI: 10.3389/fmicb.2017.00854] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/04/2017] [Accepted: 04/27/2017] [Indexed: 01/11/2023]  Open
16
Triadó-Margarit X, Veillette M, Duchaine C, Talbot M, Amato F, Minguillón MC, Martins V, de Miguel E, Casamayor EO, Moreno T. Bioaerosols in the Barcelona subway system. INDOOR AIR 2017;27:564-575. [PMID: 27687789 DOI: 10.1111/ina.12343] [Citation(s) in RCA: 36] [Impact Index Per Article: 4.5] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 05/02/2016] [Accepted: 09/23/2016] [Indexed: 05/22/2023]
17
Lynn TM, Ge T, Yuan H, Wei X, Wu X, Xiao K, Kumaresan D, Yu SS, Wu J, Whiteley AS. Soil Carbon-Fixation Rates and Associated Bacterial Diversity and Abundance in Three Natural Ecosystems. MICROBIAL ECOLOGY 2017;73:645-657. [PMID: 27838764 DOI: 10.1007/s00248-016-0890-x] [Citation(s) in RCA: 52] [Impact Index Per Article: 6.5] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 08/10/2016] [Accepted: 10/27/2016] [Indexed: 05/03/2023]
18
Kleiner M, Wentrup C, Holler T, Lavik G, Harder J, Lott C, Littmann S, Kuypers MMM, Dubilier N. Use of carbon monoxide and hydrogen by a bacteria–animal symbiosis from seagrass sediments. Environ Microbiol 2015;17:5023-35. [PMID: 26013766 PMCID: PMC4744751 DOI: 10.1111/1462-2920.12912] [Citation(s) in RCA: 24] [Impact Index Per Article: 2.4] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/22/2014] [Accepted: 05/19/2015] [Indexed: 11/23/2022]
19
Genomes of planktonic Acidimicrobiales: widening horizons for marine Actinobacteria by metagenomics. mBio 2015;6:mBio.02083-14. [PMID: 25670777 PMCID: PMC4337565 DOI: 10.1128/mbio.02083-14] [Citation(s) in RCA: 69] [Impact Index Per Article: 6.9] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/17/2022]  Open
20
Muthusamy S, Baltar F, González JM, Pinhassi J. Dynamics of metabolic activities and gene expression in the Roseobacter clade bacterium Phaeobacter sp. strain MED193 during growth with thiosulfate. Appl Environ Microbiol 2014;80:6933-42. [PMID: 25172867 PMCID: PMC4249017 DOI: 10.1128/aem.02038-14] [Citation(s) in RCA: 9] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/19/2014] [Accepted: 08/27/2014] [Indexed: 11/20/2022]  Open
21
Quiza L, Lalonde I, Guertin C, Constant P. Land-use influences the distribution and activity of high affinity CO-oxidizing bacteria associated to type I-coxL genotype in soil. Front Microbiol 2014;5:271. [PMID: 24971077 PMCID: PMC4053681 DOI: 10.3389/fmicb.2014.00271] [Citation(s) in RCA: 22] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/18/2014] [Accepted: 05/19/2014] [Indexed: 11/13/2022]  Open
22
Carpenter LJ, Archer SD, Beale R. Ocean-atmosphere trace gas exchange. Chem Soc Rev 2012;41:6473-506. [DOI: 10.1039/c2cs35121h] [Citation(s) in RCA: 167] [Impact Index Per Article: 12.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
23
Sorokin DY, Tourova TP, Kovaleva OL, Kuenen JG, Muyzer G. Aerobic carboxydotrophy under extremely haloalkaline conditions in Alkalispirillum/Alkalilimnicola strains isolated from soda lakes. MICROBIOLOGY-SGM 2009;156:819-827. [PMID: 19959573 DOI: 10.1099/mic.0.033712-0] [Citation(s) in RCA: 16] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 11/18/2022]
24
Characterization of the Photosynthetic Apparatus and Proteome of Roseobacter denitrificans. Curr Microbiol 2009;60:124-33. [DOI: 10.1007/s00284-009-9515-7] [Citation(s) in RCA: 12] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/30/2009] [Accepted: 09/16/2009] [Indexed: 12/19/2022]
25
CO dehydrogenase genes found in metagenomic fosmid clones from the deep mediterranean sea. Appl Environ Microbiol 2009;75:7436-44. [PMID: 19801465 DOI: 10.1128/aem.01283-09] [Citation(s) in RCA: 26] [Impact Index Per Article: 1.6] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/20/2022]  Open
26
Gene transfer agent (GTA) genes reveal diverse and dynamic Roseobacter and Rhodobacter populations in the Chesapeake Bay. ISME JOURNAL 2008;3:364-73. [DOI: 10.1038/ismej.2008.115] [Citation(s) in RCA: 32] [Impact Index Per Article: 1.9] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 11/08/2022]
27
Phylogenetic and functional gene analysis of the bacterial and archaeal communities associated with the surface microlayer of an estuary. ISME JOURNAL 2008;2:776-89. [PMID: 18356822 DOI: 10.1038/ismej.2008.28] [Citation(s) in RCA: 41] [Impact Index Per Article: 2.4] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 11/08/2022]
28
Moran MA, Miller WL. Resourceful heterotrophs make the most of light in the coastal ocean. Nat Rev Microbiol 2007;5:792-800. [PMID: 17828280 DOI: 10.1038/nrmicro1746] [Citation(s) in RCA: 108] [Impact Index Per Article: 6.0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/09/2022]
29
King GM, Weber CF. Distribution, diversity and ecology of aerobic CO-oxidizing bacteria. Nat Rev Microbiol 2007;5:107-18. [PMID: 17224920 DOI: 10.1038/nrmicro1595] [Citation(s) in RCA: 274] [Impact Index Per Article: 15.2] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/09/2022]
30
Bauer M, Kube M, Teeling H, Richter M, Lombardot T, Allers E, Würdemann CA, Quast C, Kuhl H, Knaust F, Woebken D, Bischof K, Mussmann M, Choudhuri JV, Meyer F, Reinhardt R, Amann RI, Glöckner FO. Whole genome analysis of the marine Bacteroidetes'Gramella forsetii' reveals adaptations to degradation of polymeric organic matter. Environ Microbiol 2007;8:2201-13. [PMID: 17107561 DOI: 10.1111/j.1462-2920.2006.01152.x] [Citation(s) in RCA: 249] [Impact Index Per Article: 13.8] [Reference Citation Analysis] [Abstract] [MESH Headings] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
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