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Seagren EA, Hollander DJ, Stahl DA, Rittmann BE. An integrated evaluation of bioenhanced in situ LNAPL dissolution. JOURNAL OF CONTAMINANT HYDROLOGY 2024; 264:104338. [PMID: 38692145 DOI: 10.1016/j.jconhyd.2024.104338] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 08/11/2023] [Revised: 02/29/2024] [Accepted: 03/25/2024] [Indexed: 05/03/2024]
Abstract
Performance evaluation of in situ bioremediation processes in the field is difficult due to uncertainty created by matrix and contaminant heterogeneity, inaccessibility to direct observation, expense of sampling, and limitations of some measurements. The goal of this research was to develop a strategy for evaluating in situ bioremediation of light nonaqueous-phase liquid (LNAPL) contamination and demonstrating the occurrence of bioenhanced LNAPL dissolution by: (1) integrating a suite of analyses into a rational evaluation strategy; and (2) demonstrating the strategy's application in intermediate-scale flow-cell (ISFC) experiments simulating an aquifer contaminated with a pool of LNAPL (naphthalene dissolved in dodecane). Two ISFCs were operated to evaluate how the monitored parameters changed between a "no bioremediation" scenario and an "intrinsic in situ bioremediation" scenario. Key was incorporating different measures of microbial activity and contaminant degradation relevant to bioremediation: contaminant loss; consumption of electron acceptors; and changes in total alkalinity, pH, dissolved total inorganic carbon, carbon-stable isotopes, microorganisms, and intermediate metabolites. These measurements were integrated via mass-flux modeling and mass-balance analyses to document that in situ biodegradation of naphthalene was strongly accelerated in the "intrinsic in situ bioremediation" scenario versus "no bioremediation." Furthermore, the integrated strategy provided consistent evidence of bioenhancement of LNAPL dissolution through intrinsic bioremediation by a factor of approximately 2 due to the biodegradation of the naphthalene near the pool/water interface.
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Affiliation(s)
- Eric A Seagren
- Department of Civil and Environmental Engineering, Northwestern University, Evanston, IL 60208, USA.
| | - David J Hollander
- Department of Earth and Planetary Sciences, Northwestern University, Evanston, IL 60208, USA
| | - David A Stahl
- Department of Civil and Environmental Engineering, Northwestern University, Evanston, IL 60208, USA
| | - Bruce E Rittmann
- Department of Civil and Environmental Engineering, Northwestern University, Evanston, IL 60208, USA
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2
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Carducci NGG, Dey S, Hickey DP. Recent Developments and Applications of Microbial Electrochemical Biosensors. ADVANCES IN BIOCHEMICAL ENGINEERING/BIOTECHNOLOGY 2024; 187:149-183. [PMID: 38273205 DOI: 10.1007/10_2023_236] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 01/27/2024]
Abstract
This chapter provides a comprehensive overview of microbial electrochemical biosensors, which are a unique class of biosensors that utilize the metabolic activity of microorganisms to convert chemical signals into electrical signals. The principles and mechanisms of these biosensors are discussed, including the different types of microorganisms that can be used. The various applications of microbial electrochemical biosensors in fields such as environmental monitoring, medical diagnostics, and food safety are also explored. The chapter concludes with a discussion of future research directions and potential advancements in the field of microbial electrochemical biosensors.
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Affiliation(s)
- Nunzio Giorgio G Carducci
- Department of Chemical Engineering and Materials Science, Michigan State University, East Lansing, MI, USA
| | - Sunanda Dey
- Department of Chemical Engineering and Materials Science, Michigan State University, East Lansing, MI, USA
| | - David P Hickey
- Department of Chemical Engineering and Materials Science, Michigan State University, East Lansing, MI, USA.
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3
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Hosseini A, Ashraf H, Rahimi F, Alipourfard I, Alivirdiloo V, Hashemi B, Yazdani Y, Ghazi F, Eslami M, Ameri Shah Reza M, Dadashpour M. Recent advances in the detection of glioblastoma, from imaging-based methods to proteomics and biosensors: A narrative review. Cancer Cell Int 2023; 23:98. [PMID: 37210528 DOI: 10.1186/s12935-023-02947-1] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/13/2023] [Accepted: 05/16/2023] [Indexed: 05/22/2023] Open
Abstract
Glioblastoma (GBM) is an aggressive type of cancer that originates in the cells called astrocytes, which support the functioning of nerve cells. It can develop in either the brain or the spinal cord and is also known as glioblastoma multiform. GBM is a highly aggressive cancer that can occur in either the brain or spinal cord. The detection of GBM in biofluids offers potential advantages over current methods for diagnosing and treatment monitoring of glial tumors. Biofluid-based detection of GBM focuses on identifying tumor-specific biomarkers in blood and cerebrospinal fluid. To date, different methods have been used to detect biomarkers of GBM, ranging from various imaging techniques to molecular approaches. Each method has its own strengths and weaknesses. The present review aims to scrutinize multiple diagnostic methods for GBM, with a focus on proteomics methods and biosensors. In other words, this study aims to provide an overview of the most significant research findings based on proteomics and biosensors for the diagnosis of GBM.
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Affiliation(s)
| | - Hami Ashraf
- Digestive Diseases Research Institute, Tehran University of Medical Sciences, Tehran, Iran
| | - Fatemeh Rahimi
- Division of Clinical Laboratory, Zahra Mardani Azari Children Training, Research and Treatment Center, Tabriz University of Medical Sciences, Tabriz, Iran
| | - Iraj Alipourfard
- Institute of Physical Chemistry, Polish Academy of Science, Warsaw, Poland
| | - Vahid Alivirdiloo
- Medical Doctor Ramsar Campus, Mazandaran University of Medical Sciences, Ramsar, Iran
| | - Behnam Hashemi
- Department of Bacteriology, Faculty of Medical Science, Tarbiat Modares University, Tehran, Iran
| | - Yalda Yazdani
- Immunology Research Center, Tabriz University of Medical Sciences, Tabriz, Iran
| | - Farhood Ghazi
- Stem Cell Research Center, Tabriz University of Medical Sciences, Tabriz, Iran.
| | - Majid Eslami
- Department of Medical Bacteriology and Virology, Semnan University of Medical Sciences, Semnan, Iran
| | | | - Mehdi Dadashpour
- Department of Medical Biotechnology, Semnan University of Medical Sciences, Semnan, Iran.
- Student Research Committee, Semnan University of Medical Sciences, Semnan, Iran.
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Jiang W, Li Z, Yang Q, Hou X. Integration of Metallic Nanomaterials and Recognition Elements for the Specifically Monitoring of Pesticides in Electrochemical Sensing. Crit Rev Anal Chem 2023:1-22. [DOI: 10.1080/10408347.2023.2189955] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 03/29/2023]
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5
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Biosensors, modern technology for the detection of cancer-associated bacteria. Biotechnol Lett 2022; 44:683-701. [PMID: 35543825 DOI: 10.1007/s10529-022-03257-8] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/29/2022] [Accepted: 03/30/2022] [Indexed: 11/02/2022]
Abstract
Cancer is undoubtedly one of the major human challenges worldwide. A number of pathogenic bacteria are deemed to be potentially associated with the disease. Accordingly, accurate and specific identification of cancer-associated bacteria can play an important role in cancer control and prevention. A variety of conventional methods such as culture, serology, and molecular-based methods as well as PCR and real-time PCR have been adopted to identify bacteria. However, supply costs, machinery fees, training expenses, consuming time, and the need for advanced equipment are the main problems with the old methods. As a result, advanced and modern techniques are being developed to overcome the disadvantages of conventional methods. Biosensor technology is one of the innovative methods that has been the focus of researchers due to its numerous advantages. The main purpose of this study is to provide an overview of the latest developed biosensors for recognizing the paramount cancer-associated bacteria.
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Iyer M, Shreshtha I, Baradia H, Chattopadhyay S. Challenges and opportunities of using immobilized lipase as biosensor. Biotechnol Genet Eng Rev 2022; 38:87-110. [PMID: 35285414 DOI: 10.1080/02648725.2022.2050499] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/02/2022]
Abstract
Over the years, the science of biosensors has evolved significantly. The first or earliest generation of biosensors only detected either the decrease or increase of product or reactant-based natural mediators as the pathway for electron transfer. The subsequent second-generation biosensors were biomolecule based and used artificial redox mediators, such as organic dyes to detect and to increase the reproducibility and sensitivity of the result. However, the recent generation of biosensors work mostly on the principle of electron mobility, with different criteria, such as selectivity, precision, sensitivity, etc., can be used to quantify, efficiently. This review deals with exploring the scope and applications of Immobilized lipase biosensors. Generally, Triglycerides or TG molecules are either detected using Gas Chromatography or, using a chemical or an enzymatic assay. Immobilization of lipase on solid supports has led to increased stability and reusability of the enzyme in non-aqueous solvents. With better enzyme performance, efficient product recovery, and separation from the reaction, immobilized lipase biosensors are garnering increasing interest worldwide. Along with so many advantages including but not limiting to ones mentioned earlier, immobilized lipase-based biosensors come with their own set of challenges, such as the partitioning of the analyte with aqueous medium, slower reaction rate, etc., they have been discussed in the following review. Alongside, we also review the development of a new generation of biosensors and bioelectronic devices based on nanotechnology.
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Affiliation(s)
- Mahadevan Iyer
- Department of Bioengineering, Birla Institute of Technology Mesra, Ranchi, India
| | - Ishita Shreshtha
- Department of Bioengineering, Birla Institute of Technology Mesra, Ranchi, India
| | - Hrithik Baradia
- Department of Bioengineering, Birla Institute of Technology Mesra, Ranchi, India
| | - Soham Chattopadhyay
- Department of Bioengineering, Birla Institute of Technology Mesra, Ranchi, India
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7
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Jain U, Saxena K, Hooda V, Balayan S, Singh AP, Tikadar M, Chauhan N. Emerging vistas on pesticides detection based on electrochemical biosensors - An update. Food Chem 2022; 371:131126. [PMID: 34583176 DOI: 10.1016/j.foodchem.2021.131126] [Citation(s) in RCA: 43] [Impact Index Per Article: 21.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/06/2021] [Revised: 08/19/2021] [Accepted: 09/09/2021] [Indexed: 12/18/2022]
Abstract
Organophosphates and carbamates pesticides are widely used to increase crop production globally causing a threat to human health and the environment. A variety of pesticides are applied during different stages of vegetable production. Therefore, monitoring the presence of pesticide residues in food and soil has great relevance to sensitive pesticide detection through distinct determination methods that are urgently required. Conventional techniques for the detection of pesticides have several limitations that can be overcome by the development of highly sensitive, fast, reliable and easy-to-use electrochemical biosensors. Herein, we describe the types of biosensors with the main focus on electrochemical biosensors fabricated for the detection of OPPs and carbamates pesticides. An overview of conventional techniques employed for pesticide detection is also discussed. This review aims to provide a glance of recently developed biosensors for some common pesticides like chlorpyrifos, malathion, parathion, paraoxon, and carbaryl which are present in food and environment samples.
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Affiliation(s)
- Utkarsh Jain
- Amity Institute of Nanotechnology (AINT), Amity University Uttar Pradesh (AUUP), Noida 201313, India
| | - Kirti Saxena
- Amity Institute of Nanotechnology (AINT), Amity University Uttar Pradesh (AUUP), Noida 201313, India
| | - Vinita Hooda
- Department of Botany, M. D. University, Rohtak 124001, Haryana, India
| | - Sapna Balayan
- Amity Institute of Nanotechnology (AINT), Amity University Uttar Pradesh (AUUP), Noida 201313, India
| | - Amar Pal Singh
- Amity Institute of Forensic Sciences (AIFS), Amity University Uttar Pradesh (AUUP), Noida 201313, India; Forensic Science Laboratory, Govt. of NCT of Delhi, Sector-14, Rohini, Delhi, India
| | - Mayukh Tikadar
- Amity Institute of Nanotechnology (AINT), Amity University Uttar Pradesh (AUUP), Noida 201313, India
| | - Nidhi Chauhan
- Amity Institute of Nanotechnology (AINT), Amity University Uttar Pradesh (AUUP), Noida 201313, India.
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Zhao M, Wang M, Zhang X, Zhu Y, Cao J, She Y, Cao Z, Li G, Wang J, Abd El-Aty AM. Recognition elements based on the molecular biological techniques for detecting pesticides in food: A review. Crit Rev Food Sci Nutr 2021:1-24. [PMID: 34852703 DOI: 10.1080/10408398.2021.2009762] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/19/2022]
Abstract
Excessive use of pesticides can cause contamination of the environment and agricultural products that are directly threatening human life and health. Therefore, in the process of food safety supervision, it is crucial to conduct sensitive and rapid detection of pesticide residues. The recognition element is the vital component of sensors and methods for fast testing pesticide residues in food. Improper recognition elements may lead to defects of testing methods, such as poor stability, low sensitivity, high economic costs, and waste of time. We can use the molecular biological technique to address these challenges as a good strategy for recognition element production and modification. Herein, we review the molecular biological methods of five specific recognition elements, including aptamers, genetic engineering antibodies, DNAzymes, genetically engineered enzymes, and whole-cell-based biosensors. In addition, the application of these identification elements combined with biosensor and immunoassay methods in actual detection was also discussed. The purpose of this review was to provide a valuable reference for further development of rapid detection methods for pesticide residues.
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Affiliation(s)
- Mingqi Zhao
- Institute of Quality Standardization & Testing Technology for Agro-Products, Chinese Academy of Agricultural Sciences, Beijing, China.,Key Laboratory of Agrofood Safety and Quality (Beijing), Ministry of Agriculture and Rural Areas, Beijing, China
| | - Miao Wang
- Institute of Quality Standardization & Testing Technology for Agro-Products, Chinese Academy of Agricultural Sciences, Beijing, China.,Key Laboratory of Agrofood Safety and Quality (Beijing), Ministry of Agriculture and Rural Areas, Beijing, China
| | - Xiaoguang Zhang
- Hebei Xiangzhi Testing Technology Co., Ltd, Shijiazhuang, China.,Core Facilities and Centers of Hebei Medical University, Shijiazhuang, China
| | - Yongan Zhu
- Institute of Quality Standardization & Testing Technology for Agro-Products, Chinese Academy of Agricultural Sciences, Beijing, China.,Key Laboratory of Agrofood Safety and Quality (Beijing), Ministry of Agriculture and Rural Areas, Beijing, China
| | - Jing Cao
- Institute of Quality Standardization & Testing Technology for Agro-Products, Chinese Academy of Agricultural Sciences, Beijing, China.,Key Laboratory of Agrofood Safety and Quality (Beijing), Ministry of Agriculture and Rural Areas, Beijing, China
| | - Yongxin She
- Institute of Quality Standardization & Testing Technology for Agro-Products, Chinese Academy of Agricultural Sciences, Beijing, China.,Key Laboratory of Agrofood Safety and Quality (Beijing), Ministry of Agriculture and Rural Areas, Beijing, China
| | - Zhen Cao
- Institute of Quality Standardization & Testing Technology for Agro-Products, Chinese Academy of Agricultural Sciences, Beijing, China.,Key Laboratory of Agrofood Safety and Quality (Beijing), Ministry of Agriculture and Rural Areas, Beijing, China
| | - Guangyue Li
- State Key Laboratory for Biology of Plant Diseases and Insect Pests, Institute of Plant Protection, Chinese Academy of Agricultural Sciences, Beijing, China
| | - Jing Wang
- Institute of Quality Standardization & Testing Technology for Agro-Products, Chinese Academy of Agricultural Sciences, Beijing, China.,Key Laboratory of Agrofood Safety and Quality (Beijing), Ministry of Agriculture and Rural Areas, Beijing, China
| | - A M Abd El-Aty
- Department of Pharmacology, Faculty of Veterinary Medicine, Cairo University, Giza, Egypt.,Department of Medical Pharmacology, Medical Faculty, Ataturk University, Erzurum, Turkey
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9
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Andriukonis E, Celiesiute-Germaniene R, Ramanavicius S, Viter R, Ramanavicius A. From Microorganism-Based Amperometric Biosensors towards Microbial Fuel Cells. SENSORS (BASEL, SWITZERLAND) 2021; 21:2442. [PMID: 33916302 PMCID: PMC8038125 DOI: 10.3390/s21072442] [Citation(s) in RCA: 16] [Impact Index Per Article: 5.3] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 02/28/2021] [Revised: 03/25/2021] [Accepted: 03/29/2021] [Indexed: 02/06/2023]
Abstract
This review focuses on the overview of microbial amperometric biosensors and microbial biofuel cells (MFC) and shows how very similar principles are applied for the design of both types of these bioelectronics-based devices. Most microorganism-based amperometric biosensors show poor specificity, but this drawback can be exploited in the design of microbial biofuel cells because this enables them to consume wider range of chemical fuels. The efficiency of the charge transfer is among the most challenging and critical issues during the development of any kind of biofuel cell. In most cases, particular redox mediators and nanomaterials are applied for the facilitation of charge transfer from applied biomaterials towards biofuel cell electrodes. Some improvements in charge transfer efficiency can be achieved by the application of conducting polymers (CPs), which can be used for the immobilization of enzymes and in some particular cases even for the facilitation of charge transfer. In this review, charge transfer pathways and mechanisms, which are suitable for the design of biosensors and in biofuel cells, are discussed. Modification methods of the cell-wall/membrane by conducting polymers in order to enhance charge transfer efficiency of microorganisms, which can be potentially applied in the design of microbial biofuel cells, are outlined. The biocompatibility-related aspects of conducting polymers with microorganisms are summarized.
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Affiliation(s)
- Eivydas Andriukonis
- NanoTechnas-Center of Nanotechnology and Material Science, Faculty of Chemistry and Geosciences, Vilnius University, LT-03225 Vilnius, Lithuania; (E.A.); (R.C.-G.); (S.R.)
- Department of Physical Chemistry, Faculty of Chemistry and Geosciences, Vilnius University, LT-03225 Vilnius, Lithuania
- Laboratory of Nanotechnology, State Research Institute Center for Physical Sciences and Technology, LT-10257 Vilnius, Lithuania
| | - Raimonda Celiesiute-Germaniene
- NanoTechnas-Center of Nanotechnology and Material Science, Faculty of Chemistry and Geosciences, Vilnius University, LT-03225 Vilnius, Lithuania; (E.A.); (R.C.-G.); (S.R.)
- Laboratory of Bioelectrics, State Research Institute Center for Physical Sciences and Technology, LT-10257 Vilnius, Lithuania
| | - Simonas Ramanavicius
- NanoTechnas-Center of Nanotechnology and Material Science, Faculty of Chemistry and Geosciences, Vilnius University, LT-03225 Vilnius, Lithuania; (E.A.); (R.C.-G.); (S.R.)
- Department of Physical Chemistry, Faculty of Chemistry and Geosciences, Vilnius University, LT-03225 Vilnius, Lithuania
- Laboratory of Nanotechnology, State Research Institute Center for Physical Sciences and Technology, LT-10257 Vilnius, Lithuania
| | - Roman Viter
- NanoTechnas-Center of Nanotechnology and Material Science, Faculty of Chemistry and Geosciences, Vilnius University, LT-03225 Vilnius, Lithuania; (E.A.); (R.C.-G.); (S.R.)
- Center for Collective Use of Scientific Equipment, Sumy State University, 40018 Sumy, Ukraine
- Institute of Atomic Physics and Spectroscopy, University of Latvia, LV-1004 Riga, Latvia
| | - Arunas Ramanavicius
- NanoTechnas-Center of Nanotechnology and Material Science, Faculty of Chemistry and Geosciences, Vilnius University, LT-03225 Vilnius, Lithuania; (E.A.); (R.C.-G.); (S.R.)
- Department of Physical Chemistry, Faculty of Chemistry and Geosciences, Vilnius University, LT-03225 Vilnius, Lithuania
- Laboratory of Nanotechnology, State Research Institute Center for Physical Sciences and Technology, LT-10257 Vilnius, Lithuania
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