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Caudill V, Ralph PL. Genetic architecture, spatial heterogeneity, and the coevolutionary arms race between newts and snakes. BIORXIV : THE PREPRINT SERVER FOR BIOLOGY 2024:2023.12.07.570693. [PMID: 38106105 PMCID: PMC10723474 DOI: 10.1101/2023.12.07.570693] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 12/19/2023]
Abstract
Coevolution between two species can lead to exaggerated phenotypes that vary in a correlated manner across space. However, the conditions under which we expect such spatially varying coevolutionary patterns in polygenic traits are not well-understood. We investigate the coevolutionary dynamics between two species undergoing reciprocal adaptation across space and time, using simulations inspired by the Taricha newt - Thamnophis garter snake system. One striking observation from this system is that newts in some areas carry much more tetrodotoxin than in other areas, and garter snakes that live near more toxic newts tend to be more resistant to this toxin, a correlation seen across several broad geographic areas. Furthermore, snakes seem to be "winning" the coevolutionary arms race, i.e., having a high level of resistance compared to local newt toxicity, despite substantial variation in both toxicity and resistance across the range. We explore how possible genetic architectures of the toxin and resistance traits would affect the coevolutionary dynamics by manipulating both mutation rate and effect size of mutations across many simulations. We find that coevolutionary dynamics alone were not sufficient in our simulations to produce the striking mosaic of levels of toxicity and resistance observed in nature, but simulations with ecological heterogeneity (in trait costliness or interaction rate) did produce such patterns. We also find that in simulations, newts tend to "win" across most combinations of genetic architectures, although the species with higher mutational genetic variance tends to have an advantage.
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Seneci L, Mikheyev AS. Sodium Channel β Subunits-An Additional Element in Animal Tetrodotoxin Resistance? Int J Mol Sci 2024; 25:1478. [PMID: 38338757 PMCID: PMC10855141 DOI: 10.3390/ijms25031478] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/30/2023] [Revised: 12/09/2023] [Accepted: 12/15/2023] [Indexed: 02/12/2024] Open
Abstract
Tetrodotoxin (TTX) is a neurotoxic molecule used by many animals for defense and/or predation, as well as an important biomedical tool. Its ubiquity as a defensive agent has led to repeated independent evolution of tetrodotoxin resistance in animals. TTX binds to voltage-gated sodium channels (VGSC) consisting of α and β subunits. Virtually all studies investigating the mechanisms behind TTX resistance have focused on the α subunit of voltage-gated sodium channels, where tetrodotoxin binds. However, the possibility of β subunits also contributing to tetrodotoxin resistance was never explored, though these subunits act in concert. In this study, we present preliminary evidence suggesting a potential role of β subunits in the evolution of TTX resistance. We gathered mRNA sequences for all β subunit types found in vertebrates across 12 species (three TTX-resistant and nine TTX-sensitive) and tested for signatures of positive selection with a maximum likelihood approach. Our results revealed several sites experiencing positive selection in TTX-resistant taxa, though none were exclusive to those species in subunit β1, which forms a complex with the main physiological target of TTX (VGSC Nav1.4). While experimental data validating these findings would be necessary, this work suggests that deeper investigation into β subunits as potential players in tetrodotoxin resistance may be worthwhile.
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Affiliation(s)
- Lorenzo Seneci
- Adaptive Biotoxicology Lab, School of the Environment, The University of Queensland, St Lucia, QLD 4067, Australia;
| | - Alexander S. Mikheyev
- Evolutionary Genomics Group, Research School of Biology, Australian National University, Canberra, ACT 0200, Australia
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Wooster EIF, Gaynor KM, Carthey AJR, Wallach AD, Stanton LA, Ramp D, Lundgren EJ. Animal cognition and culture mediate predator-prey interactions. Trends Ecol Evol 2024; 39:52-64. [PMID: 37839906 DOI: 10.1016/j.tree.2023.09.012] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/10/2023] [Revised: 09/12/2023] [Accepted: 09/19/2023] [Indexed: 10/17/2023]
Abstract
Predator-prey ecology and the study of animal cognition and culture have emerged as independent disciplines. Research combining these disciplines suggests that both animal cognition and culture can shape the outcomes of predator-prey interactions and their influence on ecosystems. We review the growing body of work that weaves animal cognition or culture into predator-prey ecology, and argue that both cognition and culture are significant but poorly understood mechanisms mediating how predators structure ecosystems. We present a framework exploring how previous experiences with the predation process creates feedback loops that alter the predation sequence. Cognitive and cultural predator-prey ecology offers ecologists new lenses through which to understand species interactions, their ecological consequences, and novel methods to conserve wildlife in a changing world.
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Affiliation(s)
- Eamonn I F Wooster
- Gulbali Institute, School of Agricultural, Environmental, and Veterinary Sciences, Charles Sturt University, Albury, NSW, Australia.
| | - Kaitlyn M Gaynor
- Departments of Zoology and Botany, University of British Columbia, Vancouver, BC V6T 1Z4, Canada
| | - Alexandra J R Carthey
- School of Natural Sciences, Macquarie University, Macquarie Park, NSW 2113, Australia
| | - Arian D Wallach
- School of Biology and Environmental Science, Faculty of Science, Queensland University of Technology, Brisbane, QLD, Australia
| | - Lauren A Stanton
- Department of Environmental Science, Policy, and Management, University of California Berkeley, Berkeley, CA 94720-3114, USA
| | - Daniel Ramp
- Centre for Compassionate Conservation, TD School, University of Technology Sydney, Ultimo, NSW 2007, Australia
| | - Erick J Lundgren
- School of Biology and Environmental Science, Faculty of Science, Queensland University of Technology, Brisbane, QLD, Australia; Centre for Biodiversity Dynamics in a Changing World (BIOCHANGE), Department of Biology, Aarhus University, Aarhus, Denmark; Section for Ecoinformatics and Biodiversity, Department of Biology, Aarhus University, Aarhus C, Denmark
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Rogers KJ, Beckers OM. Multi-Species Host Use by the Parasitoid Fly Ormia lineifrons. INSECTS 2023; 14:744. [PMID: 37754712 PMCID: PMC10531574 DOI: 10.3390/insects14090744] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 08/04/2023] [Revised: 08/29/2023] [Accepted: 08/31/2023] [Indexed: 09/28/2023]
Abstract
Antagonistic species relationships such as parasitoid/host interactions lead to evolutionary arms races between species. Many parasitoids use more than one host species, requiring the parasitoid to adapt to multiple hosts, sometimes being the leader or the follower in the evolutionary back-and-forth between species. Thus, multi-species interactions are dynamic and show temporary evolutionary outcomes at a given point in time. We investigated the interactions of the multivoltine parasitoid fly Ormia lineifrons that uses different katydid hosts for each of its fly generations sequentially over time. We hypothesized that this fly is adapted to utilizing all hosts equally well for the population to persist. We quantified and compared the fly's development in each of the four Neoconocephalus hosts. Cumulative parasitism rates ranged between ~14% and 73%, but parasitoid load and development time did not differ across host species. Yet, pupal size was lowest for flies using N. velox as a host compared to N. triops and other host species. Successful development from pupa to adult fly differed across host species, with flies emerging from N. triops displaying a significantly lower development success rate than those emerging from N. velox and the other two hosts. Interestingly, N. triops and N. velox did not differ in size and were smaller than N. robustus and N. nebrascensis hosts. Thus, O. lineifrons utilized all hosts but displayed especially low ability to develop in N. triops, potentially due to differences in the nutritional status of the host. In the multi-species interactions between the fly and its hosts, the poor use of N. triops may currently affect the fly's evolution the most. Similarities and differences across host utilization and their evolutionary background are discussed.
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Womack MC, Steigerwald E, Blackburn DC, Cannatella DC, Catenazzi A, Che J, Koo MS, McGuire JA, Ron SR, Spencer CL, Vredenburg VT, Tarvin RD. State of the Amphibia 2020: A Review of Five Years of Amphibian Research and Existing Resources. ICHTHYOLOGY & HERPETOLOGY 2022. [DOI: 10.1643/h2022005] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 11/06/2022]
Affiliation(s)
- Molly C. Womack
- Department of Biology, Utah State University, Logan, Utah 84322; . ORCID: 0000-0002-3346-021X
| | - Emma Steigerwald
- Museum of Vertebrate Zoology, University of California, Berkeley, Berkeley, California 94720; (ES) ; (MSK) ; (JAM) ; (CS) ; (VTV) ; and (RDT)
| | - David C. Blackburn
- Department of Natural History, Florida Museum of Natural History, University of Florida, Gainesville, Florida 32611; . ORCID: 0000-0002-1810-9886
| | - David C. Cannatella
- Department of Integrative Biology, University of Texas at Austin, Austin, Texas 78712; . ORCID: 0000-0001-8675-0520
| | | | - Jing Che
- State Key Laboratory of Genetic Resources and Evolution & Yunnan Key Laboratory of Biodiversity and Ecological Security of Gaoligong Mountain, Kunming Institute of Zoology, Chinese Academy of Sciences, Kunming, China; . ORCID: 0000-0003-4246-6
| | - Michelle S. Koo
- Museum of Vertebrate Zoology, University of California, Berkeley, Berkeley, California 94720; (ES) ; (MSK) ; (JAM) ; (CS) ; (VTV) ; and (RDT)
| | - Jimmy A. McGuire
- Museum of Vertebrate Zoology, University of California, Berkeley, Berkeley, California 94720; (ES) ; (MSK) ; (JAM) ; (CS) ; (VTV) ; and (RDT)
| | - Santiago R. Ron
- Museo de Zoología, Escuela de Biología, Pontificia Universidad Católica del Ecuador, Quito, Ecuador; . ORCID: 0000-0001-6300-9350
| | - Carol L. Spencer
- Museum of Vertebrate Zoology, University of California, Berkeley, Berkeley, California 94720; (ES) ; (MSK) ; (JAM) ; (CS) ; (VTV) ; and (RDT)
| | - Vance T. Vredenburg
- Museum of Vertebrate Zoology, University of California, Berkeley, Berkeley, California 94720; (ES) ; (MSK) ; (JAM) ; (CS) ; (VTV) ; and (RDT)
| | - Rebecca D. Tarvin
- Museum of Vertebrate Zoology, University of California, Berkeley, Berkeley, California 94720; (ES) ; (MSK) ; (JAM) ; (CS) ; (VTV) ; and (RDT)
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