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Sakurai A, Takahashi S, Mochizuki T, Sugimoto T. Tip-Enhanced Sum Frequency Generation for Molecular Vibrational Nanospectroscopy. NANO LETTERS 2025; 25:6390-6398. [PMID: 40210593 DOI: 10.1021/acs.nanolett.4c06065] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 04/12/2025]
Abstract
Vibrational sum frequency generation (SFG) is a nonlinear spectroscopic technique widely used to study the molecular structure and dynamics of surface systems. However, the spatial resolution achieved by far-field observations is constrained by the diffraction limit, obscuring molecular details in inhomogeneous structures smaller than the wavelength of light. To overcome this limitation, we developed a system for tip-enhanced SFG (TE-SFG) spectroscopy based on a scanning tunneling microscope. We successfully detected vibrational TE-SFG signals from adsorbed molecules on a gold substrate under ambient conditions. The phase analysis of interferometric SFG spectra provided information on molecular orientation. Furthermore, the observed TE-SFG signal was confirmed to originate from a highly localized region within a gap between the tip apex and the sample substrate. This method offers a novel platform for nonlinear optical nanospectroscopy, paving the way for the investigation of surface molecular systems beyond the diffraction limit.
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Affiliation(s)
- Atsunori Sakurai
- Institute for Molecular Science, National Institutes of Natural Sciences, Okazaki, Aichi 444-8585, Japan
- Graduate Institute for Advanced Studies, SOKENDAI, Okazaki, Aichi 444-8585, Japan
- Laser-Driven Electron-Acceleration Technology Group, RIKEN SPring-8 Center, Sayocho, Hyogo 679-5148, Japan
| | - Shota Takahashi
- Institute for Molecular Science, National Institutes of Natural Sciences, Okazaki, Aichi 444-8585, Japan
| | - Tatsuto Mochizuki
- Institute for Molecular Science, National Institutes of Natural Sciences, Okazaki, Aichi 444-8585, Japan
- Graduate Institute for Advanced Studies, SOKENDAI, Okazaki, Aichi 444-8585, Japan
| | - Toshiki Sugimoto
- Institute for Molecular Science, National Institutes of Natural Sciences, Okazaki, Aichi 444-8585, Japan
- Graduate Institute for Advanced Studies, SOKENDAI, Okazaki, Aichi 444-8585, Japan
- Laser-Driven Electron-Acceleration Technology Group, RIKEN SPring-8 Center, Sayocho, Hyogo 679-5148, Japan
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Fellows A, John B, Wolf M, Thämer M. Extracting the Heterogeneous 3D Structure of Molecular Films Using Higher Dimensional SFG Microscopy. J Phys Chem Lett 2024; 15:10849-10857. [PMID: 39436358 PMCID: PMC11533227 DOI: 10.1021/acs.jpclett.4c02679] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/13/2024] [Revised: 10/17/2024] [Accepted: 10/18/2024] [Indexed: 10/23/2024]
Abstract
Ultrathin molecular films are widespread in both natural and industrial settings, where details of the molecular structure such as density, out-of-plane tilt angles, and in-plane directionality determine their physicochemical properties. Many of these films possess important molecular-to-macroscopic heterogeneity in these structural parameters, which have traditionally been difficult to characterize. Here, we show how extending sum-frequency generation (SFG) microscopy measurements to higher dimensionality by azimuthal-scanning can extract the spatial variation in the three-dimensional molecular structure at an interface. We extend the commonly applied theoretical assumptions used to analyze SFG signals to the study of systems possessing in-plane anisotropy. This theoretical framework is then applied to a phase-separated mixed lipid monolayer to investigate the variation in molecular density and 3D orientation across the chirally packed lipid domains. The results show little variation in out-of-plane structure but a distinct micron-scale region at the domain boundaries with a reduction in both density and in-plane ordering.
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Affiliation(s)
- Alexander
P. Fellows
- Fritz-Haber-Institut der
Max-Planck-Gesellschaft, Faradayweg 4-6, Berlin 14195, Germany
| | - Ben John
- Fritz-Haber-Institut der
Max-Planck-Gesellschaft, Faradayweg 4-6, Berlin 14195, Germany
| | - Martin Wolf
- Fritz-Haber-Institut der
Max-Planck-Gesellschaft, Faradayweg 4-6, Berlin 14195, Germany
| | - Martin Thämer
- Fritz-Haber-Institut der
Max-Planck-Gesellschaft, Faradayweg 4-6, Berlin 14195, Germany
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3
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Luna Palacios YY, Khandani S, Garcia EP, Chen A, Wang S, Roy K, Knez D, Kim DA, Rocha-Mendoza I, Potma EO. Spectroscopic analysis of the sum-frequency response of the carbon-hydrogen stretching modes in collagen type I. J Chem Phys 2024; 160:185101. [PMID: 38716851 PMCID: PMC11081710 DOI: 10.1063/5.0205685] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/27/2024] [Accepted: 04/22/2024] [Indexed: 05/12/2024] Open
Abstract
We studied the origin of the vibrational signatures in the sum-frequency generation (SFG) spectrum of fibrillar collagen type I in the carbon-hydrogen stretching regime. For this purpose, we developed an all-reflective, laser-scanning SFG microscope with minimum chromatic aberrations and excellent retention of the polarization state of the incident beams. We performed detailed SFG measurements of aligned collagen fibers obtained from rat tail tendon, enabling the characterization of the magnitude and polarization-orientation dependence of individual tensor elements Xijk2 of collagen's nonlinear susceptibility. Using the three-dimensional atomic positions derived from published crystallographic data of collagen type I, we simulated its Xijk2 elements for the methylene stretching vibration and compared the predicted response with the experimental results. Our analysis revealed that the carbon-hydrogen stretching range of the SFG spectrum is dominated by symmetric stretching modes of methylene bridge groups on the pyrrolidine rings of the proline and hydroxyproline residues, giving rise to a dominant peak near 2942 cm-1 and a shoulder at 2917 cm-1. Weak asymmetric stretches of the methylene bridge group of glycine are observed in the region near 2870 cm-1, whereas asymmetric CH2-stretching modes on the pyrrolidine rings are found in the 2980 to 3030 cm-1 range. These findings help predict the protein's nonlinear optical properties from its crystal structure, thus establishing a connection between the protein structure and SFG spectroscopic measurements.
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Affiliation(s)
- Yryx Y. Luna Palacios
- Department of Chemistry, University of California at Irvine, Irvine, California 92697-2025, USA
| | - Salile Khandani
- Department of Biomedical Engineering, University of California at Irvine, Irvine, California 92697-2025, USA
| | - Evan P. Garcia
- Department of Chemistry, University of California at Irvine, Irvine, California 92697-2025, USA
| | - Anabel Chen
- Department of Chemistry, University of California at Irvine, Irvine, California 92697-2025, USA
| | - Siyang Wang
- Department of Chemistry, University of California at Irvine, Irvine, California 92697-2025, USA
| | - Khokan Roy
- Department of Chemistry, University of California at Irvine, Irvine, California 92697-2025, USA
| | - David Knez
- Department of Chemistry, University of California at Irvine, Irvine, California 92697-2025, USA
| | - Do A. Kim
- Department of Biomedical Engineering, University of California at Irvine, Irvine, California 92697-2025, USA
| | - Israel Rocha-Mendoza
- Centro de Investigación Científica y de Educación Superior de Ensenada (CICESE), Carretera Ensenada-Tijuana, No. 3918, Zona Playitas, Ensenada 22860, Mexico
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4
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De R, Calvet NA, Dietzek-Ivanšić B. Charge Transfer Dynamics in Organic-Inorganic Hybrid Heterostructures-Insights by Vibrational-Sum Frequency Generation Spectroscopy. Angew Chem Int Ed Engl 2024; 63:e202313574. [PMID: 38471070 DOI: 10.1002/anie.202313574] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/12/2023] [Revised: 12/11/2023] [Accepted: 02/12/2024] [Indexed: 03/14/2024]
Abstract
Organic-inorganic heterostructures play a pivotal role in modern electronic and optoelectronic applications including photodetectors and field effect transistors, as well as in solar energy conversion such as photoelectrodes of dye-sensitized solar cells, photoelectrochemical cells, and in organic photovoltaics. To a large extent, performance of such devices is controlled by charge transfer dynamics at and across (inner) interfaces, e.g., between a wide band gap semiconductor and molecular sensitizers and/or catalysts. Hence, a detailed understanding of the structure-dynamics-function relationship of such functional interfaces is necessary to rationalize possible performance limitations of these materials and devices on a molecular level. Vibrational sum-frequency generation (VSFG) spectroscopy, as an interface-sensitive spectroscopic technique, allows to obtain chemically specific information from interfaces and combines such chemical insights with ultrafast time resolution, when integrated as a spectroscopic probe into a pump-probe scheme. Thus, this minireview discusses the advantages and potential of VSFG spectroscopy for investigating interfacial charge transfer dynamics and structural changes at inner interfaces. A critical perspective of the unique spectroscopic view of otherwise inaccessible interfaces is presented, which we hope opens new opportunities for an improved understanding of function-determining processes in complex materials, and brings together communities who are devoted to designing materials and devices with spectroscopists.
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Affiliation(s)
- Ratnadip De
- Research Department Functional Interfaces, Leibniz Institute of Photonic Technology Jena, Albert-Einstein-Strasse 9, 07745, Jena, Germany
- Institute of Physical Chemistry, Friedrich Schiller University Jena, Helmholtzweg 4, 07743, Jena, Germany
| | - Neus A Calvet
- Research Department Functional Interfaces, Leibniz Institute of Photonic Technology Jena, Albert-Einstein-Strasse 9, 07745, Jena, Germany
- Institute of Physical Chemistry, Friedrich Schiller University Jena, Helmholtzweg 4, 07743, Jena, Germany
| | - Benjamin Dietzek-Ivanšić
- Research Department Functional Interfaces, Leibniz Institute of Photonic Technology Jena, Albert-Einstein-Strasse 9, 07745, Jena, Germany
- Institute of Physical Chemistry, Friedrich Schiller University Jena, Helmholtzweg 4, 07743, Jena, Germany
- Center for Energy and Environmental Chemistry, Friedrich Schiller University Jena, Philosophenweg 7a, 07743, Jena, Germany
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Fellows AP, John B, Wolf M, Thämer M. Spiral packing and chiral selectivity in model membranes probed by phase-resolved sum-frequency generation microscopy. Nat Commun 2024; 15:3161. [PMID: 38605056 PMCID: PMC11009297 DOI: 10.1038/s41467-024-47573-1] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/29/2023] [Accepted: 04/04/2024] [Indexed: 04/13/2024] Open
Abstract
Since the lipid raft model was developed at the end of the last century, it became clear that the specific molecular arrangements of phospholipid assemblies within a membrane have profound implications in a vast range of physiological functions. Studies of such condensed lipid islands in model systems using fluorescence and Brewster angle microscopies have shown a wide range of sizes and morphologies, with suggestions of substantial in-plane molecular anisotropy and mesoscopic structural chirality. Whilst these variations can significantly alter many membrane properties including its fluidity, permeability and molecular recognition, the details of the in-plane molecular orientations underlying these traits remain largely unknown. Here, we use phase-resolved sum-frequency generation microscopy on model membranes of mixed chirality phospholipid monolayers to fully determine the three-dimensional molecular structure of the constituent micron-scale condensed domains. We find that the domains possess curved molecular directionality with spiralling mesoscopic packing, where both the molecular and spiral turning directions depend on the lipid chirality, but form structures clearly deviating from mirror symmetry for different enantiomeric mixtures. This demonstrates strong enantioselectivity in the domain growth process and indicates fundamental thermodynamic differences between homo- and heterochiral membranes, which may be relevant in the evolution of homochirality in all living organisms.
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Affiliation(s)
| | - Ben John
- Fritz-Haber-Institute of the Max-Planck-Society, Berlin, Germany
| | - Martin Wolf
- Fritz-Haber-Institute of the Max-Planck-Society, Berlin, Germany
| | - Martin Thämer
- Fritz-Haber-Institute of the Max-Planck-Society, Berlin, Germany.
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Khan T, John B, Niemann R, Paarmann A, Wolf M, Thämer M. Compact oblique-incidence nonlinear widefield microscopy with paired-pixel balanced imaging. OPTICS EXPRESS 2023; 31:28792-28804. [PMID: 37710691 DOI: 10.1364/oe.495903] [Citation(s) in RCA: 5] [Impact Index Per Article: 2.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Received: 05/22/2023] [Accepted: 07/10/2023] [Indexed: 09/16/2023]
Abstract
Nonlinear (vibrational) microscopy has emerged as a successful tool for the investigation of molecular systems as it combines label-free chemical characterization with spatial resolution on the sub-micron scale. In addition to the molecular recognition, the physics of the nonlinear interactions allows in principle to obtain structural information on the molecular level such as molecular orientations. Due to technical limitations such as the relatively complex imaging geometry with the required oblique sample irradiation and insufficient sensitivity of the instrument this detailed molecular information is typically not accessible using widefield imaging. Here, we present, what we believe to be, a new microscope design that addresses both challenges. We introduce a simplified imaging geometry that enables the measurement of distortion-free widefield images with free space oblique sample irradiation achieving high spatial resolution (∼1 µm). Furthermore, we present a method based on a paired-pixel balanced detection system for sensitivity improvement. With this technique, we demonstrate a substantial enhancement of the signal-to-noise ratio of up to a factor of 10. While both experimental concepts presented in this work are very general and can, in principle, be applied to various microscopy techniques, we demonstrate their performance for the specific case of heterodyned, sum frequency generation (SFG) microscopy.
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Page EF, Blake MJ, Foley GA, Calhoun TR. Monitoring membranes: The exploration of biological bilayers with second harmonic generation. CHEMICAL PHYSICS REVIEWS 2022; 3:041307. [PMID: 36536669 PMCID: PMC9756348 DOI: 10.1063/5.0120888] [Citation(s) in RCA: 5] [Impact Index Per Article: 1.7] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 08/15/2022] [Accepted: 11/03/2022] [Indexed: 12/23/2022]
Abstract
Nature's seemingly controlled chaos in heterogeneous two-dimensional cell membranes stands in stark contrast to the precise, often homogeneous, environment in an experimentalist's flask or carefully designed material system. Yet cell membranes can play a direct role, or serve as inspiration, in all fields of biology, chemistry, physics, and engineering. Our understanding of these ubiquitous structures continues to evolve despite over a century of study largely driven by the application of new technologies. Here, we review the insight afforded by second harmonic generation (SHG), a nonlinear optical technique. From potential measurements to adsorption and diffusion on both model and living systems, SHG complements existing techniques while presenting a large exploratory space for new discoveries.
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Affiliation(s)
- Eleanor F. Page
- Department of Chemistry, University of Tennessee, Knoxville, Tennessee 37996, USA
| | - Marea J. Blake
- Department of Chemistry, University of Tennessee, Knoxville, Tennessee 37996, USA
| | - Grant A. Foley
- Department of Chemistry, University of Tennessee, Knoxville, Tennessee 37996, USA
| | - Tessa R. Calhoun
- Department of Chemistry, University of Tennessee, Knoxville, Tennessee 37996, USA
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8
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Wagner J, Wu Z, Wang H, Xiong W. Imaging Orientation of a Single Molecular Hierarchical Self-Assembled Sheet: The Combined Power of a Vibrational Sum Frequency Generation Microscopy and Neural Network. J Phys Chem B 2022; 126:7192-7201. [PMID: 36098975 PMCID: PMC9511492 DOI: 10.1021/acs.jpcb.2c05876] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/17/2022] [Revised: 08/30/2022] [Indexed: 11/28/2022]
Abstract
In this work, we determined the tilt angles of molecular units in hierarchical self-assembled materials on a single-sheet level, which were not available previously. This was achieved by developing a fast line-scanning vibrational sum frequency generation (VSFG) hyperspectral imaging technique in combination with neural network analysis. Rapid VSFG imaging enabled polarization resolved images on a single sheet level to be measured quickly, circumventing technical challenges due to long-term optical instability. The polarization resolved hyperspectral images were then used to extract the supramolecular tilt angle of a self-assembly through a set of spectra-tilt angle relationships which were solved through neural network analysis. This unique combination of both novel techniques offers a new pathway to resolve molecular level structural information on self-assembled materials. Understanding these properties can further drive self-assembly design from a bottom-up approach for applications in biomimetic and drug delivery research.
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Affiliation(s)
- Jackson
C. Wagner
- Department
of Chemistry and Biochemistry, University
of California San Diego, La Jolla, California 92093, United States
| | - Zishan Wu
- Department
of Chemistry and Biochemistry, University
of California San Diego, La Jolla, California 92093, United States
| | - Haoyuan Wang
- Department
of Chemistry and Biochemistry, University
of California San Diego, La Jolla, California 92093, United States
| | - Wei Xiong
- Department
of Chemistry and Biochemistry, University
of California San Diego, La Jolla, California 92093, United States
- Materials
Science and Engineering Program, University
of California San Diego, La Jolla, California 92093, United States
- Department
of Electrical and Computer Engineering, University of California San Diego, La Jolla, California 92093, United States
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Phal Y, Pfister L, Carney PS, Bhargava R. Resolution Limit in Infrared Chemical Imaging. THE JOURNAL OF PHYSICAL CHEMISTRY. C, NANOMATERIALS AND INTERFACES 2022; 126:9777-9783. [PMID: 38476191 PMCID: PMC10928383 DOI: 10.1021/acs.jpcc.2c00740] [Citation(s) in RCA: 5] [Impact Index Per Article: 1.7] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 03/14/2024]
Abstract
Chemical imaging combines the spatial specificity of optical microscopy with the spectral selectivity of vibrational spectroscopy. Mid-infrared (IR) absorption imaging instruments are now able to capture high-quality spectra with microscopic spatial detail, but the limits of their ability to resolve spatial and spectral objects remain less understood. In particular, the sensitivity of measurements to chemical and spatial changes and rules for optical design have been presented, but the influence of spectral information on spatial sensitivity is as yet relatively unexplored. We report an information theory-based approach to quantify the spatial localization capability of spectral data in chemical imaging. We explicitly consider the joint effects of the signal-to-noise ratio and spectral separation that have significance in experimental settings to derive resolution limits in IR spectroscopic imaging.
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Affiliation(s)
- Yamuna Phal
- Department of Electrical and Computer Engineering, University of Illinois at Urbana - Champaign, Urbana, Illinois 61801, United States; Beckman Institute for Advanced Science and Technology, Urbana, Illinois 61801, United States
| | - Luke Pfister
- Dynamic Imaging & Radiography Group, Los Alamos National Laboratory, Los Alamos, New Mexico 87545, United States
| | - P Scott Carney
- Institute of Optics, University of Rochester, Rochester, New York 14627, United States
| | - Rohit Bhargava
- Department of Electrical and Computer Engineering, University of Illinois at Urbana-Champaign, Urbana, Illinois 61801, United States; Beckman Institute for Advanced Science and Technology, Urbana, Illinois 61801, United States; Departments of Bioengineering, Chemical and Biomolecular Engineering, Mechanical Science and Engineering, and Chemistry, University of Illinois at Urbana-Champaign, Urbana, Illinois 61801, United States; Cancer Center at Illinois, Beckman Institute for Advanced Science and Technology, Urbana, Illinois 61801, United States
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Wang H, Xiong W. Revealing the Molecular Physics of Lattice Self-Assembly by Vibrational Hyperspectral Imaging. LANGMUIR : THE ACS JOURNAL OF SURFACES AND COLLOIDS 2022; 38:3017-3031. [PMID: 35238562 DOI: 10.1021/acs.langmuir.1c03313] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/14/2023]
Abstract
Lattice self-assemblies (LSAs), which mimic protein assemblies, were studied using a new nonlinear vibrational imaging technique called vibrational sum-frequency generation (VSFG) microscopy. This technique successfully mapped out the mesoscopic morphology, microscopic geometry, symmetry, and ultrafast dynamics of an LSA formed by β-cyclodextrin (β-CD) and sodium dodecyl sulfate (SDS). The spatial imaging also revealed correlations between these different physical properties. Such knowledge shed light on the functions and mechanical properties of LSAs. In this Feature Article, we briefly introduce the fundamental principles of the VSFG microscope and then discuss the in-depth molecular physics of the LSAs revealed by this imaging technique. The application of the VSFG microscope to the artificial LSAs also paved the way for an alternative approach to studying the structure-dynamic-function relationships of protein assemblies, which were essential for life and difficult to study because of their various and complicated interactions. We expect that the hyperspectral VSFG microscope could be broadly applied to many noncentrosymmetric soft materials.
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Wagner JC, Hunter KM, Paesani F, Xiong W. Water Capture Mechanisms at Zeolitic Imidazolate Framework Interfaces. J Am Chem Soc 2021; 143:21189-21194. [PMID: 34878776 DOI: 10.1021/jacs.1c09097] [Citation(s) in RCA: 23] [Impact Index Per Article: 5.8] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
Abstract
Water capture mechanisms of zeolitic imidazolate framework ZIF-90 are revealed by differentiating the water clustering and the center pore filling step, using vibrational sum-frequency generation spectroscopy (VSFG) at a one-micron spatial resolution and state-of-the-art molecular dynamics (MD) simulations. Through spectral line shape comparison between VSFG and IR spectra, the relative humidity dependence of VSFG intensity, and MD simulations, based on MB-pol, we found water clustering and center pore filling happen nearly simultaneously within each pore, with water filling the other pores sequentially. The integration of nonlinear optics with MD simulations provides critical mechanistic insights into the pore filling mechanism and suggests that the relative strength of the hydrogen bonds governs the water uptake mechanisms. This molecular-level detailed mechanism can inform the rational optimization of metal-organic frameworks for water harvesting.
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Affiliation(s)
- Jackson C Wagner
- Department of Chemistry and Biochemistry, University of California, San Diego, California 92093, United States
| | - Kelly M Hunter
- Department of Chemistry and Biochemistry, University of California, San Diego, California 92093, United States
| | - Francesco Paesani
- Department of Chemistry and Biochemistry, University of California, San Diego, California 92093, United States.,Materials Science and Engineering Program, University of California, San Diego, California 92093, United States
| | - Wei Xiong
- Department of Chemistry and Biochemistry, University of California, San Diego, California 92093, United States.,Materials Science and Engineering Program, University of California, San Diego, California 92093, United States.,Department of Electrical and Computer Engineering, University of California, San Diego, California 92093, United States
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