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For: Garavito A, Montagnon C, Guyot R, Bertrand B. Identification by the DArTseq method of the genetic origin of the Coffea canephora cultivated in Vietnam and Mexico. BMC Plant Biol 2016;16:242. [PMID: 27814672 PMCID: PMC5096298 DOI: 10.1186/s12870-016-0933-y] [Citation(s) in RCA: 19] [Impact Index Per Article: 2.1] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Subscribe] [Scholar Register] [Received: 05/18/2016] [Accepted: 10/25/2016] [Indexed: 05/20/2023]
Number Cited by Other Article(s)
1
Ho WK, Tanzi AS, Sang F, Tsoutsoura N, Shah N, Moore C, Bhosale R, Wright V, Massawe F, Mayes S. A genomic toolkit for winged bean Psophocarpus tetragonolobus. Nat Commun 2024;15:1901. [PMID: 38429275 PMCID: PMC10907731 DOI: 10.1038/s41467-024-45048-x] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/13/2022] [Accepted: 01/12/2024] [Indexed: 03/03/2024]  Open
2
Lachenmeier DW, Montagnon C. Convention on Biological Diversity (CBD) and the Nagoya Protocol: Implications and Compliance Strategies for the Global Coffee Community. Foods 2024;13:254. [PMID: 38254555 PMCID: PMC10814485 DOI: 10.3390/foods13020254] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/07/2023] [Revised: 01/09/2024] [Accepted: 01/11/2024] [Indexed: 01/24/2024]  Open
3
Davis AP, Kiwuka C, Faruk A, Mulumba J, Kalema J. A review of the indigenous coffee resources of Uganda and their potential for coffee sector sustainability and development. FRONTIERS IN PLANT SCIENCE 2023;13:1057317. [PMID: 36874918 PMCID: PMC9982753 DOI: 10.3389/fpls.2022.1057317] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 09/29/2022] [Accepted: 12/01/2022] [Indexed: 06/18/2023]
4
Bar I, Sambasivam PT, Davidson J, Farfan-Caceres LM, Lee RC, Hobson K, Moore K, Ford R. Current population structure and pathogenicity patterns of Ascochyta rabiei in Australia. Microb Genom 2021;7:000627. [PMID: 34283013 PMCID: PMC8477395 DOI: 10.1099/mgen.0.000627] [Citation(s) in RCA: 6] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/04/2021] [Accepted: 06/09/2021] [Indexed: 12/19/2022]  Open
5
Pruvot-Woehl S, Krishnan S, Solano W, Schilling T, Toniutti L, Bertrand B, Montagnon C. Authentication of Coffea arabica Varieties through DNA Fingerprinting and its Significance for the Coffee Sector. J AOAC Int 2021;103:325-334. [PMID: 33241280 DOI: 10.1093/jaocint/qsz003] [Citation(s) in RCA: 7] [Impact Index Per Article: 1.8] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/22/2019] [Accepted: 10/22/2019] [Indexed: 11/14/2022]
6
Akpertey A, Padi FK, Meinhardt L, Zhang D. Effectiveness of Single Nucleotide Polymorphism Markers in Genotyping Germplasm Collections of Coffea canephora Using KASP Assay. FRONTIERS IN PLANT SCIENCE 2021;11:612593. [PMID: 33569071 PMCID: PMC7868401 DOI: 10.3389/fpls.2020.612593] [Citation(s) in RCA: 4] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 09/30/2020] [Accepted: 12/28/2020] [Indexed: 06/12/2023]
7
Coffee Berry Borer (Hypothenemus hampei), a Global Pest of Coffee: Perspectives from Historical and Recent Invasions, and Future Priorities. INSECTS 2020;11:insects11120882. [PMID: 33322763 PMCID: PMC7763606 DOI: 10.3390/insects11120882] [Citation(s) in RCA: 16] [Impact Index Per Article: 3.2] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 10/27/2020] [Revised: 12/05/2020] [Accepted: 12/09/2020] [Indexed: 01/30/2023]
8
Kath J, Byrareddy VM, Craparo A, Nguyen-Huy T, Mushtaq S, Cao L, Bossolasco L. Not so robust: Robusta coffee production is highly sensitive to temperature. GLOBAL CHANGE BIOLOGY 2020;26:3677-3688. [PMID: 32223007 DOI: 10.1111/gcb.15097] [Citation(s) in RCA: 24] [Impact Index Per Article: 4.8] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 11/12/2019] [Revised: 01/30/2020] [Accepted: 03/17/2020] [Indexed: 06/10/2023]
9
Talamantes-Becerra B, Carling J, Kilian A, Georges A. Discovery of thermophilic Bacillales using reduced-representation genotyping for identification. BMC Microbiol 2020;20:114. [PMID: 32404118 PMCID: PMC7222431 DOI: 10.1186/s12866-020-01800-z] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/05/2019] [Accepted: 04/23/2020] [Indexed: 12/25/2022]  Open
10
Huang L, Wang X, Dong Y, Long Y, Hao C, Yan L, Shi T. Resequencing 93 accessions of coffee unveils independent and parallel selection during Coffea species divergence. PLANT MOLECULAR BIOLOGY 2020;103:51-61. [PMID: 32072392 DOI: 10.1007/s11103-020-00974-4] [Citation(s) in RCA: 6] [Impact Index Per Article: 1.2] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 06/19/2019] [Accepted: 01/31/2020] [Indexed: 06/10/2023]
11
Scalabrin S, Toniutti L, Di Gaspero G, Scaglione D, Magris G, Vidotto M, Pinosio S, Cattonaro F, Magni F, Jurman I, Cerutti M, Suggi Liverani F, Navarini L, Del Terra L, Pellegrino G, Ruosi MR, Vitulo N, Valle G, Pallavicini A, Graziosi G, Klein PE, Bentley N, Murray S, Solano W, Al Hakimi A, Schilling T, Montagnon C, Morgante M, Bertrand B. A single polyploidization event at the origin of the tetraploid genome of Coffea arabica is responsible for the extremely low genetic variation in wild and cultivated germplasm. Sci Rep 2020;10:4642. [PMID: 32170172 PMCID: PMC7069947 DOI: 10.1038/s41598-020-61216-7] [Citation(s) in RCA: 44] [Impact Index Per Article: 8.8] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/18/2019] [Accepted: 01/20/2020] [Indexed: 11/09/2022]  Open
12
Garot E, Joët T, Combes MC, Lashermes P. Genetic diversity and population divergences of an indigenous tree (Coffea mauritiana) in Reunion Island: role of climatic and geographical factors. Heredity (Edinb) 2019;122:833-847. [PMID: 30478354 PMCID: PMC6781115 DOI: 10.1038/s41437-018-0168-9] [Citation(s) in RCA: 13] [Impact Index Per Article: 2.2] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/08/2018] [Accepted: 11/09/2018] [Indexed: 01/23/2023]  Open
13
Talamantes-Becerra B, Carling J, Kennedy K, Gahan ME, Georges A. Identification of bacterial isolates from a public hospital in Australia using complexity-reduced genotyping. J Microbiol Methods 2019;160:11-19. [PMID: 30894330 DOI: 10.1016/j.mimet.2019.03.016] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/10/2019] [Revised: 03/16/2019] [Accepted: 03/17/2019] [Indexed: 11/25/2022]
14
Davis AP, Chadburn H, Moat J, O’Sullivan R, Hargreaves S, Nic Lughadha E. High extinction risk for wild coffee species and implications for coffee sector sustainability. SCIENCE ADVANCES 2019;5:eaav3473. [PMID: 30746478 PMCID: PMC6357749 DOI: 10.1126/sciadv.aav3473] [Citation(s) in RCA: 64] [Impact Index Per Article: 10.7] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 09/07/2018] [Accepted: 12/19/2018] [Indexed: 05/14/2023]
15
Rossetto M, Bragg J, Kilian A, McPherson H, van der Merwe M, Wilson PD. Restore and Renew: a genomics‐era framework for species provenance delimitation. Restor Ecol 2018. [DOI: 10.1111/rec.12898] [Citation(s) in RCA: 39] [Impact Index Per Article: 5.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/04/2023]
16
Fayaz F, Aghaee Sarbarzeh M, Talebi R, Azadi A. Genetic Diversity and Molecular Characterization of Iranian Durum Wheat Landraces (Triticum turgidum durum (Desf.) Husn.) Using DArT Markers. Biochem Genet 2018;57:98-116. [PMID: 30051349 DOI: 10.1007/s10528-018-9877-2] [Citation(s) in RCA: 16] [Impact Index Per Article: 2.3] [Reference Citation Analysis] [Abstract] [Key Words] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/06/2018] [Accepted: 07/14/2018] [Indexed: 01/07/2023]
17
Borzęcka E, Hawliczek-Strulak A, Bolibok L, Gawroński P, Tofil K, Milczarski P, Stojałowski S, Myśków B, Targońska-Karasek M, Grądzielewska A, Smolik M, Kilian A, Bolibok-Brągoszewska H. Effective BAC clone anchoring with genotyping-by-sequencing and Diversity Arrays Technology in a large genome cereal rye. Sci Rep 2018;8:8428. [PMID: 29849048 PMCID: PMC5976670 DOI: 10.1038/s41598-018-26541-y] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/05/2018] [Accepted: 05/16/2018] [Indexed: 11/09/2022]  Open
18
Omari S, Kamenir Y, Benichou JIC, Pariente S, Sela H, Perl-Treves R. Landraces of snake melon, an ancient Middle Eastern crop, reveal extensive morphological and DNA diversity for potential genetic improvement. BMC Genet 2018;19:34. [PMID: 29792158 PMCID: PMC5966880 DOI: 10.1186/s12863-018-0619-6] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Abstract] [Key Words] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/02/2017] [Accepted: 04/30/2018] [Indexed: 12/05/2022]  Open
19
Zhou G, Jian J, Wang P, Li C, Tao Y, Li X, Renshaw D, Clements J, Sweetingham M, Yang H. Construction of an ultra-high density consensus genetic map, and enhancement of the physical map from genome sequencing in Lupinus angustifolius. TAG. THEORETICAL AND APPLIED GENETICS. THEORETISCHE UND ANGEWANDTE GENETIK 2018;131:209-223. [PMID: 29051970 DOI: 10.1007/s00122-017-2997-y] [Citation(s) in RCA: 16] [Impact Index Per Article: 2.3] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 06/26/2017] [Accepted: 10/01/2017] [Indexed: 05/04/2023]
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