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For: Liebal UW, Fabry BA, Ravikrishnan A, Schedel CV, Schmitz S, Blank LM, Ebert BE. Genome-scale model reconstruction of the methylotrophic yeast Ogataea polymorpha. BMC Biotechnol 2021;21:23. [PMID: 33722219 PMCID: PMC7962355 DOI: 10.1186/s12896-021-00675-w] [Citation(s) in RCA: 7] [Impact Index Per Article: 1.8] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/28/2020] [Accepted: 12/04/2020] [Indexed: 11/10/2022]  Open
Number Cited by Other Article(s)
1
Eremin A, Sergeev A, Kopylov A, Rodin V, Malyshev D, Panova T, Polyakov I, Zvereva M. Long-read sequencing reveals absence of 5mC in Ogataea parapolymorpha DL-1 genome and introduces telomere-to-telomere assembly. Front Genet 2025;16:1574332. [PMID: 40417237 PMCID: PMC12098377 DOI: 10.3389/fgene.2025.1574332] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/10/2025] [Accepted: 04/22/2025] [Indexed: 05/27/2025]  Open
2
Xie L, Yu W, Gao J, Wang H, Zhou YJ. Ogataea polymorpha as a next-generation chassis for industrial biotechnology. Trends Biotechnol 2024;42:1363-1378. [PMID: 38622041 DOI: 10.1016/j.tibtech.2024.03.007] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/30/2024] [Revised: 03/15/2024] [Accepted: 03/18/2024] [Indexed: 04/17/2024]
3
Sasikumar R, Saranya S, Lourdu Lincy L, Thamanna L, Chellapandi P. Genomic insights into fish pathogenic bacteria: A systems biology perspective for sustainable aquaculture. FISH & SHELLFISH IMMUNOLOGY 2024;154:109978. [PMID: 39442738 DOI: 10.1016/j.fsi.2024.109978] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 08/09/2024] [Revised: 10/12/2024] [Accepted: 10/20/2024] [Indexed: 10/25/2024]
4
Zhang C, Sánchez BJ, Li F, Eiden CWQ, Scott WT, Liebal UW, Blank LM, Mengers HG, Anton M, Rangel AT, Mendoza SN, Zhang L, Nielsen J, Lu H, Kerkhoven EJ. Yeast9: a consensus genome-scale metabolic model for S. cerevisiae curated by the community. Mol Syst Biol 2024;20:1134-1150. [PMID: 39134886 PMCID: PMC11450192 DOI: 10.1038/s44320-024-00060-7] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/05/2024] [Revised: 07/17/2024] [Accepted: 07/31/2024] [Indexed: 10/05/2024]  Open
5
Wefelmeier K, Schmitz S, Kösters BJ, Liebal UW, Blank LM. Methanol bioconversion into C3, C4, and C5 platform chemicals by the yeast Ogataea polymorpha. Microb Cell Fact 2024;23:8. [PMID: 38172830 PMCID: PMC10763331 DOI: 10.1186/s12934-023-02283-z] [Citation(s) in RCA: 2] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/23/2023] [Accepted: 12/19/2023] [Indexed: 01/05/2024]  Open
6
Han Y, Tafur Rangel A, Pomraning KR, Kerkhoven EJ, Kim J. Advances in genome-scale metabolic models of industrially important fungi. Curr Opin Biotechnol 2023;84:103005. [PMID: 37797483 DOI: 10.1016/j.copbio.2023.103005] [Citation(s) in RCA: 6] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/01/2023] [Revised: 09/04/2023] [Accepted: 09/05/2023] [Indexed: 10/07/2023]
7
Lv X, Yu W, Zhang C, Ning P, Li J, Liu Y, Du G, Liu L. C1-based biomanufacturing: Advances, challenges and perspectives. BIORESOURCE TECHNOLOGY 2023;367:128259. [PMID: 36347475 DOI: 10.1016/j.biortech.2022.128259] [Citation(s) in RCA: 5] [Impact Index Per Article: 2.5] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 10/04/2022] [Revised: 10/29/2022] [Accepted: 10/29/2022] [Indexed: 06/16/2023]
8
Lu T, Yang Y, Feng WJ, Jin QC, Wu ZG, Jin ZH. Effect of the compound bacterial agent on microbial community of the aerobic compost of food waste. Lett Appl Microbiol 2021;74:32-43. [PMID: 34608649 DOI: 10.1111/lam.13579] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/29/2021] [Revised: 09/08/2021] [Accepted: 09/28/2021] [Indexed: 11/28/2022]
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