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Poehlein A, Zeldes B, Flaiz M, Böer T, Lüschen A, Höfele F, Baur KS, Molitor B, Kröly C, Wang M, Zhang Q, Fan Y, Chao W, Daniel R, Li F, Basen M, Müller V, Angenent LT, Sousa DZ, Bengelsdorf FR. Advanced aspects of acetogens. BIORESOURCE TECHNOLOGY 2025; 427:131913. [PMID: 39626805 DOI: 10.1016/j.biortech.2024.131913] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 06/26/2024] [Revised: 11/28/2024] [Accepted: 11/28/2024] [Indexed: 03/21/2025]
Abstract
Acetogens are a diverse group of anaerobic bacteria that are capable of carbon dioxide reduction and have for long fascinated scientists due to their unique metabolic prowess. Historically, acetogens have been recognized for their remarkable ability to grow and to produce acetate from different one-carbon sources, including carbon dioxide, carbon monoxide, formate, methanol, and methylated organic compounds. The key metabolic pathway in acetogens responsible for converting these one-carbon sources is the Wood-Ljungdahl pathway. This review offers a comprehensive overview of the latest discoveries that are related to acetogens. It delves into a variety of topics, including newly isolated acetogens, their taxonomy and physiology and highlights novel metabolic properties. Additionally, it explores metabolic engineering strategies that are designed to expand the product range of acetogens or to understand specific traits of their metabolism. Lastly, the review presents innovative gas fermentation techniques within the context of industrial applications.
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Affiliation(s)
- Anja Poehlein
- Genomic and Applied Microbiology & Göttingen Genomics Laboratory, Georg-August University, Göttingen, Germany
| | - Benjamin Zeldes
- Microbiology, Institute of Biological Sciences, University of Rostock, Rostock, Germany
| | - Maximilian Flaiz
- Laboratory of Microbiology, Wageningen University and Research, Wageningen 6708 WE, the Netherlands
| | - Tim Böer
- Genomic and Applied Microbiology & Göttingen Genomics Laboratory, Georg-August University, Göttingen, Germany
| | - Alina Lüschen
- Genomic and Applied Microbiology & Göttingen Genomics Laboratory, Georg-August University, Göttingen, Germany
| | - Franziska Höfele
- Institute of Molecular Biology and Biotechnology of Prokaryotes, University of Ulm, Ulm, Germany
| | - Kira S Baur
- Institute of Molecular Biology and Biotechnology of Prokaryotes, University of Ulm, Ulm, Germany
| | - Bastian Molitor
- Environmental Biotechnology Group, Department of Geosciences, University of Tübingen, Schnarrenbergstraße 94-96, Tübingen 72076, Germany; Cluster of Excellence - Controlling Microbes to Fight Infections, University of Tübingen, Auf der Morgenstelle 28, Tübingen 72074, Germany
| | - Christian Kröly
- Laboratory of Microbiology, Wageningen University and Research, Wageningen 6708 WE, the Netherlands; Institute of Molecular Biology and Biotechnology of Prokaryotes, University of Ulm, Ulm, Germany
| | - Meng Wang
- SINOPEC Dalian Research Institute of Petroleum and Petrochemical Co. Ltd, China
| | - Quan Zhang
- SINOPEC Dalian Research Institute of Petroleum and Petrochemical Co. Ltd, China.
| | - Yixuan Fan
- Qingdao Institute of Bioenergy and Bioprocess Technology, Chinese Academy of Sciences, China
| | - Wei Chao
- Beijing Shougang LanzaTech Technology Co. Ltd, Tianshunzhuang North Road, Shijingshan District, Beijing, China
| | - Rolf Daniel
- Genomic and Applied Microbiology & Göttingen Genomics Laboratory, Georg-August University, Göttingen, Germany
| | - Fuli Li
- Qingdao Institute of Bioenergy and Bioprocess Technology, Chinese Academy of Sciences, China
| | - Mirko Basen
- Microbiology, Institute of Biological Sciences, University of Rostock, Rostock, Germany
| | - Volker Müller
- Department of Molecular Microbiology & Bioenergetics, Institute of Molecular Biosciences, Goethe-University Frankfurt am Main, Frankfurt am Main, Germany
| | - Largus T Angenent
- Environmental Biotechnology Group, Department of Geosciences, University of Tübingen, Schnarrenbergstraße 94-96, Tübingen 72076, Germany
| | - Diana Z Sousa
- Laboratory of Microbiology, Wageningen University and Research, Wageningen 6708 WE, the Netherlands
| | - Frank R Bengelsdorf
- Institute of Molecular Biology and Biotechnology of Prokaryotes, University of Ulm, Ulm, Germany.
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Rovira-Alsina L, Romans-Casas M, Perona-Vico E, Ceballos-Escalera A, Balaguer MD, Bañeras L, Puig S. Microbial Electrochemical Technologies: Sustainable Solutions for Addressing Environmental Challenges. ADVANCES IN BIOCHEMICAL ENGINEERING/BIOTECHNOLOGY 2024. [PMID: 39739109 DOI: 10.1007/10_2024_273] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 01/02/2025]
Abstract
Addressing global challenges of waste management demands innovative approaches to turn biowaste into valuable resources. This chapter explores the potential of microbial electrochemical technologies (METs) as an alternative opportunity for biowaste valorisation and resource recovery due to their potential to address limitations associated with traditional methods. METs leverage microbial-driven oxidation and reduction reactions, enabling the conversion of different feedstocks into energy or value-added products. Their versatility spans across gas, food, water and soil streams, offering multiple solutions at different technological readiness levels to advance several sustainable development goals (SDGs) set out in the 2030 Agenda. By critically examining recent studies, this chapter uncovers challenges, optimisation strategies, and future research directions for real-world MET implementations. The integration of economic perspectives with technological developments provides a comprehensive understanding of the opportunities and demands associated with METs in advancing the circular economy agenda, emphasising their pivotal role in waste minimisation, resource efficiency promotion, and closed-loop system renovation.
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Affiliation(s)
- Laura Rovira-Alsina
- LEQUiA, Institute of the Environment, University of Girona, Girona, Catalonia, Spain
| | | | - Elisabet Perona-Vico
- gEMM, Group of Molecular Microbial Ecology, Institute of Aquatic Ecology, University of Girona, Girona, Catalonia, Spain
| | | | - M Dolors Balaguer
- LEQUiA, Institute of the Environment, University of Girona, Girona, Catalonia, Spain
| | - Lluís Bañeras
- gEMM, Group of Molecular Microbial Ecology, Institute of Aquatic Ecology, University of Girona, Girona, Catalonia, Spain
| | - Sebastià Puig
- LEQUiA, Institute of the Environment, University of Girona, Girona, Catalonia, Spain.
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Fernández-Blanco C, Pereira A, Veiga MC, Kennes C, Ganigué R. Comprehensive comparative study on n-caproate production by Clostridium kluyveri: batch vs. continuous operation modes. BIORESOURCE TECHNOLOGY 2024; 408:131138. [PMID: 39043275 DOI: 10.1016/j.biortech.2024.131138] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 05/07/2024] [Revised: 07/06/2024] [Accepted: 07/19/2024] [Indexed: 07/25/2024]
Abstract
Recently, there has been notable interest in researching and industrially producing medium-chain carboxylic acids (MCCAs) like n-caproate and n-caprylate via chain elongation process. This study presents a comprehensive assessment of the behavior and MCCA production profiles of Clostridium kluyveri in batch and continuous modes, at different ethanol:acetate molar ratios (1.5:1, 3.5:1 and 5.5:1). The highest n-caproate concentration, 12.9 ± 0.67 g/L (92.9 ± 1.39 % MCCA selectivity), was achieved in batch mode at a 3.5:1 ratio. Interestingly, higher ratios favored batch mode selectivity over continuous mode when this was equal or higher to 3.5:1. Steady state operation yielded the highest n-caproate (9.5 ± 0.13 g/L) and n-caprylate (0.35 ± 0.020 g/L) concentrations at the 3.5:1 ratio. Increased ethanol:acetate ratios led to a higher excessive ethanol oxidation (EEO) in both operational modes, potentially limiting n-caproate production and selectivity, especially at the 5.5:1 ratio. Overall, this study reports the efficient MCCA production of both batch and continuous modes by C. kluyveri.
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Affiliation(s)
- Carla Fernández-Blanco
- Chemical Engineering Laboratory, Faculty of Sciences and Interdisciplinary Centre of Chemistry and Biology - Centro Interdisciplinar de Química e Bioloxía (CICA), BIOENGIN Group, University of A Coruña, E-15008-A Coruña, Spain
| | - Alexandra Pereira
- Center for Microbial Ecology and Technology (CMET), Faculty of Bioscience Engineering, Ghent University, Coupure Links 653, Ghent 9000, Belgium; Center for Advanced Process Technology for Urban Resource Recovery (CAPTURE), Frieda Saeysstraat, Ghent 9052, Belgium
| | - María C Veiga
- Chemical Engineering Laboratory, Faculty of Sciences and Interdisciplinary Centre of Chemistry and Biology - Centro Interdisciplinar de Química e Bioloxía (CICA), BIOENGIN Group, University of A Coruña, E-15008-A Coruña, Spain
| | - Christian Kennes
- Chemical Engineering Laboratory, Faculty of Sciences and Interdisciplinary Centre of Chemistry and Biology - Centro Interdisciplinar de Química e Bioloxía (CICA), BIOENGIN Group, University of A Coruña, E-15008-A Coruña, Spain
| | - Ramon Ganigué
- Center for Microbial Ecology and Technology (CMET), Faculty of Bioscience Engineering, Ghent University, Coupure Links 653, Ghent 9000, Belgium; Center for Advanced Process Technology for Urban Resource Recovery (CAPTURE), Frieda Saeysstraat, Ghent 9052, Belgium.
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Liu Y, Chen L, Duan Y, Li R, Yang Z, Liu S, Li G. Recent progress and prospects for chain elongation of transforming biomass waste into medium-chain fatty acids. CHEMOSPHERE 2024; 355:141823. [PMID: 38552798 DOI: 10.1016/j.chemosphere.2024.141823] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 02/04/2024] [Revised: 03/18/2024] [Accepted: 03/26/2024] [Indexed: 04/06/2024]
Abstract
Chain elongation technology utilises microorganisms in anaerobic digestion to transform waste biomass into medium-chain fatty acids that have greater economic value. This innovative technology expands upon traditional anaerobic digestion methods, requiring abundant substrates that serve as electron donors and acceptors, and inoculating microorganisms with chain elongation functions. While this process may result in the production of by-products and elicit competitive responses, toxicity suppression of microorganisms by substrates and products remains a significant obstacle to the industrialisation of chain elongation technology. This study provides a comprehensive overview of existing research on widely employed electron donors and their synthetic reactions, competitive reactions, inoculum selection, toxicity inhibition of substrates and products, and increased chain elongation approaches. Additionally, it presents actionable recommendations for future research and development endeavours in this domain, intending to inspire and guide researchers in advancing the frontiers of chain elongation technology.
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Affiliation(s)
- Yuhao Liu
- School of Environmental and Municipal Engineering, North China University of Water Resources and Electric Power, Zhengzhou, 450046, Henan Province, China.
| | - Long Chen
- School of Environmental and Municipal Engineering, North China University of Water Resources and Electric Power, Zhengzhou, 450046, Henan Province, China
| | - Yacong Duan
- School of Environmental and Municipal Engineering, North China University of Water Resources and Electric Power, Zhengzhou, 450046, Henan Province, China
| | - Ruihua Li
- School of Environmental and Municipal Engineering, North China University of Water Resources and Electric Power, Zhengzhou, 450046, Henan Province, China
| | - Ziyan Yang
- School of Environmental and Municipal Engineering, North China University of Water Resources and Electric Power, Zhengzhou, 450046, Henan Province, China
| | - Shuli Liu
- School of Environmental and Municipal Engineering, North China University of Water Resources and Electric Power, Zhengzhou, 450046, Henan Province, China
| | - Guoting Li
- School of Environmental and Municipal Engineering, North China University of Water Resources and Electric Power, Zhengzhou, 450046, Henan Province, China
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Fernández-Blanco C, Veiga MC, Kennes C. Effect of pH and medium composition on chain elongation with Megasphaera hexanoica producing C 4-C 8 fatty acids. Front Microbiol 2023; 14:1281103. [PMID: 38029098 PMCID: PMC10653306 DOI: 10.3389/fmicb.2023.1281103] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/21/2023] [Accepted: 10/17/2023] [Indexed: 12/01/2023] Open
Abstract
Introduction Chain elongation technology, which involves fermentation with anaerobic bacteria, has gained attention for converting short and medium chain substrates into valuable and longer-chain products like medium chain fatty acids (MCFAs). In the recent past, the focus of studies with pure chain elongating cultures was on species of other genera, mainly Clostridium kluyveri. Recently, other chain elongators have been isolated that deserve further research, such as Megasphaera hexanoica. Methods In this study, batch studies were performed in bottles with two different media to establish the optimal conditions for growth of M. hexanoica: (a) a medium rich in different sources of nitrogen and (b) a medium whose only source of nitrogen is yeast extract. Also, batch bioreactor studies at pH values of 5.8, 6.5 and 7.2 were set up to study the fermentation of lactate (i.e., electron donor) and acetate (i.e., electron acceptor) by M. hexanoica. Results and discussion Batch bottle studies revealed the yeast extract (YE) containing medium as the most promising in terms of production/cost ratio, producing n-caproate rapidly up to 2.62 ± 0.24 g/L. Subsequent bioreactor experiments at pH 5.8, 6.5, and 7.2 confirmed consistent production profiles, yielding C4-C8 fatty acids. A fourth bioreactor experiment at pH 6.5 and doubling both lactate and acetate concentrations enhanced MCFA production, resulting in 3.7 g/L n-caproate and 1.5 g/L n-caprylate. H2 and CO2 production was observed in all fermentations, being especially high under the increased substrate conditions. Overall, this study provides insights into M. hexanoica's behavior in lactate-based chain elongation and highlights optimization potential for improved productivity.
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Affiliation(s)
| | | | - Christian Kennes
- Chemical Engineering Laboratory, Faculty of Sciences and Interdisciplinary Centre of Chemistry and Biology – Centro Interdisciplinar de Química y Biología (CICA), BIOENGIN Group, University of A Coruña, Coruña, Spain
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