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Blacker TS, Duchen MR, Bain AJ. NAD(P)H binding configurations revealed by time-resolved fluorescence and two-photon absorption. Biophys J 2023; 122:1240-1253. [PMID: 36793214 PMCID: PMC10111271 DOI: 10.1016/j.bpj.2023.02.014] [Citation(s) in RCA: 5] [Impact Index Per Article: 2.5] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/13/2022] [Revised: 09/07/2022] [Accepted: 02/10/2023] [Indexed: 02/16/2023] Open
Abstract
NADH and NADPH play key roles in the regulation of metabolism. Their endogenous fluorescence is sensitive to enzyme binding, allowing changes in cellular metabolic state to be determined using fluorescence lifetime imaging microscopy (FLIM). However, to fully uncover the underlying biochemistry, the relationships between their fluorescence and binding dynamics require greater understanding. Here we accomplish this through time- and polarization-resolved fluorescence and polarized two-photon absorption measurements. Two lifetimes result from binding of both NADH to lactate dehydrogenase and NADPH to isocitrate dehydrogenase. The composite fluorescence anisotropy indicates the shorter (1.3-1.6 ns) decay component to be accompanied by local motion of the nicotinamide ring, pointing to attachment solely via the adenine moiety. For the longer lifetime (3.2-4.4 ns), the nicotinamide conformational freedom is found to be fully restricted. As full and partial nicotinamide binding are recognized steps in dehydrogenase catalysis, our results unify photophysical, structural, and functional aspects of NADH and NADPH binding and clarify the biochemical processes that underlie their contrasting intracellular lifetimes.
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Affiliation(s)
- Thomas S Blacker
- Department of Physics & Astronomy, University College London, London, United Kingdom; Research Department of Cell & Developmental Biology, University College London, London, United Kingdom
| | - Michael R Duchen
- Research Department of Cell & Developmental Biology, University College London, London, United Kingdom
| | - Angus J Bain
- Department of Physics & Astronomy, University College London, London, United Kingdom.
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2
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Liang W, Chen D, Guan H, Park HC, Li K, Li A, Li MJ, Gannot I, Li X. Label-Free Metabolic Imaging In Vivo by Two-Photon Fluorescence Lifetime Endomicroscopy. ACS PHOTONICS 2022; 9:4017-4029. [PMID: 39726730 PMCID: PMC11671153 DOI: 10.1021/acsphotonics.2c01493] [Citation(s) in RCA: 4] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 12/28/2024]
Abstract
NADH intensity and fluorescence lifetime characteristics have proved valuable intrinsic biomarkers for profiling the cellular metabolic status of living biological tissues. To fully leverage the potential of NADH fluorescence lifetime imaging microscopy (FLIM) in (pre)clinical studies and translational applications, a compact and flexible endomicroscopic embodiment is essential. Herein we present our newly developed two-photon fluorescence (2PF) lifetime imaging endomicroscope (2p-FLeM) that features an about 2 mm diameter, subcellular resolution, and excellent emission photon utilization efficiency and can extract NADH lifetime parameters of living tissues and organs reliably using a safe excitation power (~30 mW) and moderate pixel dwelling time (≤10 μs). In vivo experiments showed that the 2p-FLeM system was capable of tracking NADH lifetime dynamics of cultured cancer cells and subcutaneous mouse tumor models subject to induced apoptosis, and of a functioning mouse kidney undergoing acute ischemia-reperfusion perturbation. The complementary structural and metabolic information afforded by the 2p-FLeM system promises functional histological imaging of label-free internal organs in vivo and in situ for practical clinical diagnosis and therapeutics applications.
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Affiliation(s)
- Wenxuan Liang
- School of Biomedical Engineering, Suzhou Institute for Advanced Research, University of Science and Technology of China, Suzhou, Jiangsu 215000, China; School of Physical Sciences, University of Science and Technology of China, Hefei, Anhui 230026, China
| | - Defu Chen
- Department of Biomedical Engineering, Johns Hopkins University, Baltimore, Maryland 21205, United States
| | - Honghua Guan
- Department of Electrical and Computer Engineering, Johns Hopkins University, Baltimore, Maryland 21218, United States
| | - Hyeon-Cheol Park
- Department of Biomedical Engineering, Johns Hopkins University, Baltimore, Maryland 21205, United States
| | - Kaiyan Li
- Department of Biomedical Engineering, Johns Hopkins University, Baltimore, Maryland 21205, United States
| | - Ang Li
- Department of Biomedical Engineering, Johns Hopkins University, Baltimore, Maryland 21205, United States
| | - Ming-Jun Li
- Science and Technology Division, Corning Incorporated, Corning, New York 14831, United States
| | - Israel Gannot
- Department of Electrical and Computer Engineering, Johns Hopkins University, Baltimore, Maryland 21218, United States
| | - Xingde Li
- Department of Biomedical Engineering, Johns Hopkins University, Baltimore, Maryland 21205, United States; Department of Electrical and Computer Engineering, Johns Hopkins University, Baltimore, Maryland 21218, United States
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3
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Feuk H, Nilsson S, Aldén M, Richter M. Investigating photomultiplier tube nonlinearities in high-speed phosphor thermometry using light emitting diode simulated decay curves. THE REVIEW OF SCIENTIFIC INSTRUMENTS 2021; 92:123102. [PMID: 34972472 DOI: 10.1063/5.0063230] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Received: 07/13/2021] [Accepted: 11/06/2021] [Indexed: 06/14/2023]
Abstract
Photomultiplier tube (PMT) nonlinearities relevant for single shot high-speed lifetime phosphor thermometry were investigated by simulating decay curves with a light emitting diode (LED) at repetition rates between 1 Hz and 10 kHz. The PMT gain, LED decay time, and background radiant flux were also varied to investigate their impact on the measured decay time error. Errors in the measured decay time due to nonlinear PMT performance lead to temperature measurement errors; therefore, having the measured decay time sensitive to only phosphor temperature is highly valuable for more reliable temperature measurements. Photocathode bleaching had a significant impact on the signal level linearity for PMTs with excitation frequency in the kHz regime but had a smaller impact on the decay time error. Space charge effects were most noticeable at high radiant flux levels and high repetition rates. Strong background radiant flux may lead to decay time errors, and a gateable photocathode could be an effective method to reduce decay time errors. The best decay time measurement configuration to maximize precision without sacrificing accuracy is to use PMT gain in the recommended range and the highest radiant flux where the PMT response is still linear. The degree of nonlinearity in the PMT response is partly detector dependent; therefore, the results in this work may differ among detectors; however, the analysis presented in this work provides guidelines for improving the temperature accuracy of kHz lifetime phosphor thermometry measurements.
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Affiliation(s)
- Henrik Feuk
- Combustion Physics, Lund University, Professorsgatan 1, SE-223 63 Lund, Sweden
| | - Sebastian Nilsson
- Combustion Physics, Lund University, Professorsgatan 1, SE-223 63 Lund, Sweden
| | - Marcus Aldén
- Combustion Physics, Lund University, Professorsgatan 1, SE-223 63 Lund, Sweden
| | - Mattias Richter
- Combustion Physics, Lund University, Professorsgatan 1, SE-223 63 Lund, Sweden
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Ucar H, Watanabe S, Noguchi J, Morimoto Y, Iino Y, Yagishita S, Takahashi N, Kasai H. Mechanical actions of dendritic-spine enlargement on presynaptic exocytosis. Nature 2021; 600:686-689. [PMID: 34819666 DOI: 10.1038/s41586-021-04125-7] [Citation(s) in RCA: 38] [Impact Index Per Article: 9.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/01/2020] [Accepted: 10/12/2021] [Indexed: 11/09/2022]
Abstract
Synaptic transmission involves cell-to-cell communication at the synaptic junction between two neurons, and chemical and electrical forms of this process have been extensively studied. In the brain, excitatory glutamatergic synapses are often made on dendritic spines that enlarge during learning1-5. As dendritic spines and the presynaptic terminals are tightly connected with the synaptic cleft6, the enlargement may have mechanical effects on presynaptic functions7. Here we show that fine and transient pushing of the presynaptic boutons with a glass pipette markedly promotes both the evoked release of glutamate and the assembly of SNARE (soluble N-ethylmaleimide-sensitive factor attachment protein receptor) proteins8-12-as measured by Förster resonance transfer (FRET) and fluorescence lifetime imaging-in rat slice culture preparations13. Both of these effects persisted for more than 20 minutes. The increased presynaptic FRET was independent of cytosolic calcium (Ca2+), but dependent on the assembly of SNARE proteins and actin polymerization in the boutons. Notably, a low hypertonic solution of sucrose (20 mM) had facilitatory effects on both the FRET and the evoked release without inducing spontaneous release, in striking contrast with a high hypertonic sucrose solution (300 mM), which induced exocytosis by itself14. Finally, spine enlargement induced by two-photon glutamate uncaging enhanced the evoked release and the FRET only when the spines pushed the boutons by their elongation. Thus, we have identified a mechanosensory and transduction mechanism15 in the presynaptic boutons, in which the evoked release of glutamate is enhanced for more than 20 min.
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Affiliation(s)
- Hasan Ucar
- Laboratory of Structural Physiology, Center for Disease Biology and Integrative Medicine, Faculty of Medicine, The University of Tokyo, Tokyo, Japan.,International Research Center for Neurointelligence (WPI-IRCN), UTIAS, The University of Tokyo, Tokyo, Japan
| | - Satoshi Watanabe
- Laboratory of Structural Physiology, Center for Disease Biology and Integrative Medicine, Faculty of Medicine, The University of Tokyo, Tokyo, Japan.,Department of Ultrastructural Research, National Institute of Neuroscience, National Center of Neurology and Psychiatry, Tokyo, Japan
| | - Jun Noguchi
- Laboratory of Structural Physiology, Center for Disease Biology and Integrative Medicine, Faculty of Medicine, The University of Tokyo, Tokyo, Japan.,Department of Ultrastructural Research, National Institute of Neuroscience, National Center of Neurology and Psychiatry, Tokyo, Japan
| | - Yuichi Morimoto
- Laboratory of Structural Physiology, Center for Disease Biology and Integrative Medicine, Faculty of Medicine, The University of Tokyo, Tokyo, Japan.,International Research Center for Neurointelligence (WPI-IRCN), UTIAS, The University of Tokyo, Tokyo, Japan
| | - Yusuke Iino
- Laboratory of Structural Physiology, Center for Disease Biology and Integrative Medicine, Faculty of Medicine, The University of Tokyo, Tokyo, Japan.,International Research Center for Neurointelligence (WPI-IRCN), UTIAS, The University of Tokyo, Tokyo, Japan
| | - Sho Yagishita
- Laboratory of Structural Physiology, Center for Disease Biology and Integrative Medicine, Faculty of Medicine, The University of Tokyo, Tokyo, Japan.,International Research Center for Neurointelligence (WPI-IRCN), UTIAS, The University of Tokyo, Tokyo, Japan
| | - Noriko Takahashi
- Laboratory of Structural Physiology, Center for Disease Biology and Integrative Medicine, Faculty of Medicine, The University of Tokyo, Tokyo, Japan.,Department of Physiology, Kitasato University School of Medicine, Sagamihara, Japan
| | - Haruo Kasai
- Laboratory of Structural Physiology, Center for Disease Biology and Integrative Medicine, Faculty of Medicine, The University of Tokyo, Tokyo, Japan. .,International Research Center for Neurointelligence (WPI-IRCN), UTIAS, The University of Tokyo, Tokyo, Japan.
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5
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Bianchetti G, Spirito MD, Maulucci G. Unsupervised clustering of multiparametric fluorescent images extends the spectrum of detectable cell membrane phases with sub-micrometric resolution. BIOMEDICAL OPTICS EXPRESS 2020; 11:5728-5744. [PMID: 33149982 PMCID: PMC7587257 DOI: 10.1364/boe.399655] [Citation(s) in RCA: 11] [Impact Index Per Article: 2.2] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Received: 06/09/2020] [Revised: 07/09/2020] [Accepted: 07/23/2020] [Indexed: 05/08/2023]
Abstract
Solvatochromic probes undergo an emission shift when the hydration level of the membrane environment increases and are commonly used to distinguish between solid-ordered and liquid-disordered phases in artificial membrane bilayers. This emission shift is currently limited in unraveling the broad spectrum of membrane phases of natural cell membranes and their spatial organization. Spectrally resolved fluorescence lifetime imaging can provide pixel-resolved multiparametric information about the biophysical state of the membranes, like membrane hydration, microviscosity and the partition coefficient of the probe. Here, we introduce a clustering based analysis that, leveraging the multiparametric content of spectrally resolved lifetime images, allows us to classify through an unsupervised learning approach multiple membrane phases with sub-micrometric resolution. This method extends the spectrum of detectable membrane phases allowing to dissect and characterize up to six different phases, and to study real-time phase transitions in cultured cells and tissues undergoing different treatments. We applied this method to investigate membrane remodeling induced by high glucose on PC-12 neuronal cells, associated with the development of diabetic neuropathy. Due to its wide applicability, this method provides a new paradigm in the analysis of environmentally sensitive fluorescent probes.
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Affiliation(s)
- Giada Bianchetti
- Fondazione Policlinico Gemelli IRCSS, 00168
Rome, Italy
- Neuroscience Department, Biophysics
Section, Università Cattolica del Sacro Cuore, 00168 Rome, Italy
| | - Marco De Spirito
- Fondazione Policlinico Gemelli IRCSS, 00168
Rome, Italy
- Neuroscience Department, Biophysics
Section, Università Cattolica del Sacro Cuore, 00168 Rome, Italy
| | - Giuseppe Maulucci
- Fondazione Policlinico Gemelli IRCSS, 00168
Rome, Italy
- Neuroscience Department, Biophysics
Section, Università Cattolica del Sacro Cuore, 00168 Rome, Italy
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6
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Reissaus CA, Day KH, Mirmira RG, Dunn KW, Pavalko FM, Day RN. PIE-FLIM Measurements of Two Different FRET-Based Biosensor Activities in the Same Living Cells. Biophys J 2020; 118:1820-1829. [PMID: 32191861 DOI: 10.1016/j.bpj.2020.03.003] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/10/2020] [Revised: 02/27/2020] [Accepted: 03/02/2020] [Indexed: 12/14/2022] Open
Abstract
We report the use of pulsed interleaved excitation (PIE)-fluorescence lifetime imaging microscopy (FLIM) to measure the activities of two different biosensor probes simultaneously in single living cells. Many genetically encoded biosensors rely on the measurement of Förster resonance energy transfer (FRET) to detect changes in biosensor conformation that accompany the targeted cell signaling event. One of the most robust ways of quantifying FRET is to measure changes in the fluorescence lifetime of the donor fluorophore using FLIM. The study of complex signaling networks in living cells demands the ability to track more than one of these cellular events at the same time. Here, we demonstrate how PIE-FLIM can separate and quantify the signals from different FRET-based biosensors to simultaneously measure changes in the activity of two cell signaling pathways in the same living cells in tissues. The imaging system described here uses selectable laser wavelengths and synchronized detection gating that can be tailored and optimized for each FRET pair. Proof-of-principle studies showing simultaneous measurement of cytosolic calcium and protein kinase A activity are shown, but the PIE-FLIM approach is broadly applicable to other signaling pathways.
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Affiliation(s)
- Christopher A Reissaus
- Department of Pediatrics, Indiana University School of Medicine, Indianapolis, Indiana; The Center for Diabetes and Metabolic Diseases, Indiana University School of Medicine, Indianapolis, Indiana
| | - Kathleen H Day
- Department of Anatomy, Cell Biology & Physiology, Indiana University School of Medicine, Indianapolis, Indiana
| | - Raghavendra G Mirmira
- Department of Pediatrics, Indiana University School of Medicine, Indianapolis, Indiana; The Center for Diabetes and Metabolic Diseases, Indiana University School of Medicine, Indianapolis, Indiana
| | - Kenneth W Dunn
- The Center for Diabetes and Metabolic Diseases, Indiana University School of Medicine, Indianapolis, Indiana; Department of Medicine, Division of Nephrology, Indiana University School of Medicine, Indianapolis, Indiana
| | - Fredrick M Pavalko
- Department of Anatomy, Cell Biology & Physiology, Indiana University School of Medicine, Indianapolis, Indiana; The Indiana Center for Musculoskeletal Health, Indiana University School of Medicine, Indianapolis, Indiana
| | - Richard N Day
- The Center for Diabetes and Metabolic Diseases, Indiana University School of Medicine, Indianapolis, Indiana; Department of Anatomy, Cell Biology & Physiology, Indiana University School of Medicine, Indianapolis, Indiana.
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7
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Halip H, Yoshimura Y, Inami W, Kawata Y. Ultrashort laser based two-photon phase-resolved fluorescence lifetime measurement method. Methods Appl Fluoresc 2020; 8:025003. [PMID: 32000143 DOI: 10.1088/2050-6120/ab71c2] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/11/2022]
Abstract
This paper presents a two-photon phase-resolved fluorescence-lifetime measurement method based on the use of an ultrashort pulse laser. The proposed method also involves the use of a lock-in amplifier to control the phase difference between the reference and fluorescence signals, thereby facilitating the use of an alternative method for determining fluorescence lifetimes. Verification of the fluorescence lifetimes as measured in this study was performed using rhodamine B and a cellular thermoprobe as samples. In this study, we assume that the fluorescence decay was monoexponential in all cases. Rhodamine B was observed to exhibit an average fluorescence lifetime of 2.15 ns, whereas a temperature sensitivity of 1.39 ns C-1 over a temperature range of 33.79-37.2 °C was demonstrated for the cellular thermoprobe. These results validate the feasibility of the proposed method for accurate measurement of fluorescence lifetimes using a simple laser configuration.
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Affiliation(s)
- Hafizah Halip
- Graduate School of Science and Technology, Shizuoka University, 3-5-1 Johoku, Naka, Hamamatsu 432-8561, Japan
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8
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He S, Wei X, Qin Z, Chen C, Wu Z, Qu JY. In vivo study of metabolic dynamics and heterogeneity in brown and beige fat by label-free multiphoton redox and fluorescence lifetime microscopy. JOURNAL OF BIOPHOTONICS 2020; 13:e201960057. [PMID: 31626372 DOI: 10.1002/jbio.201960057] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 07/28/2019] [Revised: 10/07/2019] [Accepted: 10/16/2019] [Indexed: 06/10/2023]
Abstract
In this work, the metabolic characteristics of adipose tissues in live mouse model were investigated using a multiphoton redox ratio and fluorescence lifetime imaging technology. By analyzing the intrinsic fluorescence of metabolic coenzymes, we measured the optical redox ratios of adipocytes in vivo and studied their responses to thermogenesis. The fluorescence lifetime imaging further revealed changes in protein bindings of metabolic coenzymes in the adipocytes during thermogenesis. Our study uncovered significant heterogeneity in the cellular structures and metabolic characteristics of thermogenic adipocytes in brown and beige fat. Subgroups of brown and beige adipocytes were identified based on the distinct lipid size distributions, redox ratios, fluorescence lifetimes and thermogenic capacities. The results of our study show that this label-free imaging technique can shed new light on in vivo study of metabolic dynamics and heterogeneity of adipose tissues in live organisms.
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Affiliation(s)
- Sicong He
- Department of Electronic and Computer Engineering, Hong Kong University of Science and Technology, Kowloon, Hong Kong, People's Republic of China
- State Key Laboratory of Molecular Neuroscience, Hong Kong University of Science and Technology, Kowloon, Hong Kong, People's Republic of China
- Center of Systems Biology and Human Health, Hong Kong University of Science and Technology, Kowloon, Hong Kong, People's Republic of China
| | - Xiuqing Wei
- State Key Laboratory of Molecular Neuroscience, Hong Kong University of Science and Technology, Kowloon, Hong Kong, People's Republic of China
- Center of Systems Biology and Human Health, Hong Kong University of Science and Technology, Kowloon, Hong Kong, People's Republic of China
- Division of Life Science, Center for Stem Cell Research, Hong Kong University of Science and Technology, Kowloon, Hong Kong, People's Republic of China
| | - Zhongya Qin
- Department of Electronic and Computer Engineering, Hong Kong University of Science and Technology, Kowloon, Hong Kong, People's Republic of China
- State Key Laboratory of Molecular Neuroscience, Hong Kong University of Science and Technology, Kowloon, Hong Kong, People's Republic of China
- Center of Systems Biology and Human Health, Hong Kong University of Science and Technology, Kowloon, Hong Kong, People's Republic of China
| | - Congping Chen
- Department of Electronic and Computer Engineering, Hong Kong University of Science and Technology, Kowloon, Hong Kong, People's Republic of China
- State Key Laboratory of Molecular Neuroscience, Hong Kong University of Science and Technology, Kowloon, Hong Kong, People's Republic of China
- Center of Systems Biology and Human Health, Hong Kong University of Science and Technology, Kowloon, Hong Kong, People's Republic of China
| | - Zhenguo Wu
- State Key Laboratory of Molecular Neuroscience, Hong Kong University of Science and Technology, Kowloon, Hong Kong, People's Republic of China
- Center of Systems Biology and Human Health, Hong Kong University of Science and Technology, Kowloon, Hong Kong, People's Republic of China
- Division of Life Science, Center for Stem Cell Research, Hong Kong University of Science and Technology, Kowloon, Hong Kong, People's Republic of China
| | - Jianan Y Qu
- Department of Electronic and Computer Engineering, Hong Kong University of Science and Technology, Kowloon, Hong Kong, People's Republic of China
- State Key Laboratory of Molecular Neuroscience, Hong Kong University of Science and Technology, Kowloon, Hong Kong, People's Republic of China
- Center of Systems Biology and Human Health, Hong Kong University of Science and Technology, Kowloon, Hong Kong, People's Republic of China
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9
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Hirmiz N, Tsikouras A, Osterlund EJ, Richards M, Andrews DW, Fang Q. Cross-talk reduction in a multiplexed synchroscan streak camera with simultaneous calibration. OPTICS EXPRESS 2019; 27:22602-22614. [PMID: 31510548 DOI: 10.1364/oe.27.022602] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Received: 05/10/2019] [Accepted: 07/14/2019] [Indexed: 06/10/2023]
Abstract
The streak camera is a picosecond resolution photodetector with parallel input capability; however, the degree of multiplexing is limited by crosstalk and temporal uncertainty in the sweeping field. We introduced a fixed time delay between adjacent fibers to reduce crosstalk in the synchroscan mode. The fixed delay and a tunable electronic delay between the input pulse and the synchroscan unit allows robust separation modes between the streaks, while spatial and temporal nonlinearities can be calibrated in. The efficacy of the design is demonstrated through a 100-fold multiplexed confocal fluorescence lifetime imaging microscope in live cells.
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10
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Rytelewski M, Haryutyunan K, Nwajei F, Shanmugasundaram M, Wspanialy P, Zal MA, Chen CH, El Khatib M, Plunkett S, Vinogradov SA, Konopleva M, Zal T. Merger of dynamic two-photon and phosphorescence lifetime microscopy reveals dependence of lymphocyte motility on oxygen in solid and hematological tumors. J Immunother Cancer 2019; 7:78. [PMID: 30885258 PMCID: PMC6423744 DOI: 10.1186/s40425-019-0543-y] [Citation(s) in RCA: 31] [Impact Index Per Article: 5.2] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/03/2019] [Accepted: 02/21/2019] [Indexed: 02/08/2023] Open
Abstract
Background Low availability of oxygen in tumors contributes to the hostility of the tumor microenvironment toward the immune system. However, the dynamic relationship between local oxygen levels and the immune surveillance of tumors by tumor infiltrating T-lymphocytes (TIL) remains unclear. This situation reflects a methodological difficulty in visualizing oxygen gradients in living tissue in a manner that is suitable for spatiotemporal quantification and contextual correlation with individual cell dynamics tracked by typical fluorescence reporter systems. Methods Here, we devise a regimen for intravital oxygen and cell dynamics co-imaging, termed ‘Fast’ Scanning Two-photon Phosphorescence Lifetime Imaging Microscopy (FaST-PLIM). Using FaST-PLIM, we image the cellular motility of T-lymphocytes in relation to the microscopic distribution of oxygen in mouse models of hematological and solid tumors, namely in bone marrow with or without B-cell acute lymphocytic leukemia (ALL), and in lungs with sarcoma tumors. Results Both in bone marrow leukemia and solid tumor models, TILs encountered regions of varying oxygen concentrations, including regions of hypoxia (defined as pO2 below 5 mmHg), especially in advanced-stage ALL and within solid tumor cores. T cell motility was sustained and weakly correlated with local pO2 above 5 mmHg but it was very slow in pO2 below this level. In solid tumors, this relationship was reflected in slow migration of TIL in tumor cores compared to that in tumor margins. Remarkably, breathing 100% oxygen alleviated tumor core hypoxia and rapidly invigorated the motility of otherwise stalled tumor core TILs. Conclusions This study demonstrates a versatile and highly contextual FaST-PLIM method for phosphorescence lifetime-based oxygen imaging in living animal tumor immunology models. The initial results of this method application to ALL and solid lung tumor models highlight the importance of oxygen supply for the maintenance of intratumoral T cell migration, define a 5 mmHg local oxygen concentration threshold for TIL motility, and demonstrate efficacy of supplementary oxygen breathing in TIL motility enhancement coincident with reduction of tumor hypoxia. Electronic supplementary material The online version of this article (10.1186/s40425-019-0543-y) contains supplementary material, which is available to authorized users.
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Affiliation(s)
- Mateusz Rytelewski
- Department of Immunology, University of Texas MD Anderson Cancer Center, U902, 7455 Fannin St, Houston, 77054, TX, USA
| | - Karine Haryutyunan
- Department of Leukemia, University of Texas MD Anderson Cancer Center, Houston, TX, USA
| | - Felix Nwajei
- Department of Immunology, University of Texas MD Anderson Cancer Center, U902, 7455 Fannin St, Houston, 77054, TX, USA
| | - Meenakshi Shanmugasundaram
- Department of Immunology, University of Texas MD Anderson Cancer Center, U902, 7455 Fannin St, Houston, 77054, TX, USA
| | | | - M Anna Zal
- Department of Immunology, University of Texas MD Anderson Cancer Center, U902, 7455 Fannin St, Houston, 77054, TX, USA
| | - Chao-Hsien Chen
- Department of Immunology, University of Texas MD Anderson Cancer Center, U902, 7455 Fannin St, Houston, 77054, TX, USA
| | - Mirna El Khatib
- Departments of Biochemistry and Biophysics and of Chemistry, University of Pennsylvania, Philadelphia, PA, USA
| | - Shane Plunkett
- Departments of Biochemistry and Biophysics and of Chemistry, University of Pennsylvania, Philadelphia, PA, USA
| | - Sergei A Vinogradov
- Departments of Biochemistry and Biophysics and of Chemistry, University of Pennsylvania, Philadelphia, PA, USA
| | - Marina Konopleva
- Department of Leukemia, University of Texas MD Anderson Cancer Center, Houston, TX, USA
| | - Tomasz Zal
- Department of Immunology, University of Texas MD Anderson Cancer Center, U902, 7455 Fannin St, Houston, 77054, TX, USA.
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11
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Melnikau D, Elcoroaristizabal S, Ryder AG. An excitation emission fluorescence lifetime spectrometer using a frequency doubled supercontinuum laser source. Methods Appl Fluoresc 2018; 6:045007. [PMID: 30101757 DOI: 10.1088/2050-6120/aad9ae] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/12/2022]
Abstract
The accurate fluorescence analysis of complex, multi-fluorophore containing proteins requires the use of multi-dimensional measurement techniques. For the measurement of intrinsic fluorescence from tyrosine (Tyr) and tryptophan (Trp) one needs tuneable UV excitation and for steady-state measurements like Excitation Emission Matrix (EEM) simple pulsed Xe lamps are commonly used. Unfortunately, simultaneous multi-dimensional wavelength and time resolved measurement of intrinsic protein fluorescence in the 260 to 400 nm spectral range are challenging and typically required the use of very complex tuneable laser systems or multiple single excitation wavelength sources. Here we have assembled and validated a novel Excitation Emission Fluorescence Lifetime Spectrometer (EEFLS) using a pulsed, frequency doubled, Super-Continuum Laser (SCL) source coupled with a 16 channel multi-anode Time Correlated Single Photon Counting (TCSPC) measurement system. This EEFLS enabled the collection of near complete lifetime and intensity maps over the most important intrinsic protein fluorescence spectral range (λ ex = 260-350/λ em = 300-500 nm). The 4-dimensional (λ ex/λ em/I(t)/τ) Excitation Emission Fluorescence Lifetime Matrix (EEFLM) data produced can be used to better characterize the complex intrinsic emission from proteins. The system was capable of measuring fluorescence emission data with high spectral (1-2 nm) resolution and had an Instrument Response Function (IRF) of ∼650 ps for accurate measurement of nanosecond lifetimes. UV power output was stable after a warm up period, with variations of <2% over 9 hours and reproducible (relative standard deviation RSD < 1.5%). This enabled the collection of accurate EEFLM data at low resolution (∼12 nm in excitation and emission) in 1-2 hours or high resolution (4 nm) in ∼17 hours. EEFLS performance in the UV was compared with a conventional commercial TCSPC system using pulsed LED excitation and validated using solutions of p-terphenyl and tryptophan.
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Affiliation(s)
- Dzmitry Melnikau
- Nanoscale Biophotonics Laboratory, School of Chemistry, National University of Ireland, Galway, Ireland
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12
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Filho AFDM, Gewehr PM, Maia JM, Jakubiak DR. Polystyrene Oxygen Optodes Doped with Ir(III) and Pd(II) meso-Tetrakis(pentafluorophenyl)porphyrin Using an LED-Based High-Sensitivity Phosphorimeter. SENSORS (BASEL, SWITZERLAND) 2018; 18:E1953. [PMID: 29914139 PMCID: PMC6021951 DOI: 10.3390/s18061953] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 04/25/2018] [Revised: 06/04/2018] [Accepted: 06/13/2018] [Indexed: 12/27/2022]
Abstract
This paper presents a gaseous oxygen detection system based on time-resolved phosphorimetry (time-domain), which is used to investigate O2 optical transducers. The primary sensing elements were formed by incorporating iridium(III) and palladium(II) meso-tetrakis(pentafluorophenyl)porphyrin complexes (IrTFPP-CO-Cl and PdTFPP) in polystyrene (PS) solid matrices. Probe excitation was obtained using a violet light-emitting diode (LED) (low power), and the resulting phosphorescence was detected by a high-sensitivity compact photomultiplier tube. The detection system performance and the preparation of the transducers are presented along with their optical properties, phosphorescence lifetimes, calibration curves and photostability. The developed lifetime measuring system showed a good signal-to-noise ratio, and reliable results were obtained from the optodes, even when exposed to moderate levels of O2. The new IrTFPP-CO-Cl membranes exhibited room temperature phosphorescence and moderate sensitivity: <τ0>/<τ21%> ratio of ≈6. A typically high degree of dynamic phosphorescence quenching was observed for the traditional indicator PdTFPP: <τ0>/<τ21%> ratio of ≈36. Pulsed-source time-resolved phosphorimetry combined with a high-sensitivity photodetector can offer potential advantages such as: (i) major dynamic range, (ii) extended temporal resolution (Δτ/Δ[O2]) and (iii) high operational stability. IrTFPP-CO-Cl immobilized in polystyrene is a promising alternative for O2 detection, offering adequate photostability and potentially mid-range sensitivity over Pt(II) and Pd(II) metalloporphyrins.
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Affiliation(s)
| | - Pedro M Gewehr
- Graduate Program in Electrical and Computer Engineering (CPGEI), Federal University of Technology-Paraná (UTFPR), Curitiba 80230-901, Brazil.
| | - Joaquim M Maia
- Graduate Program in Electrical and Computer Engineering (CPGEI), Federal University of Technology-Paraná (UTFPR), Curitiba 80230-901, Brazil.
| | - Douglas R Jakubiak
- Department of Electronics (DAELN), Federal University of Technology-Paraná (UTFPR), Curitiba 80230-901, Brazil.
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13
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Towards in-vivo assessment of fluorescence lifetime: imaging using time-gated intensified CCD camera. Biocybern Biomed Eng 2018. [DOI: 10.1016/j.bbe.2018.08.006] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/18/2022]
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14
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Feeks JA, Hunter JJ. Adaptive optics two-photon excited fluorescence lifetime imaging ophthalmoscopy of exogenous fluorophores in mice. BIOMEDICAL OPTICS EXPRESS 2017; 8:2483-2495. [PMID: 28663886 PMCID: PMC5480493 DOI: 10.1364/boe.8.002483] [Citation(s) in RCA: 12] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 01/04/2017] [Revised: 04/07/2017] [Accepted: 04/07/2017] [Indexed: 05/05/2023]
Abstract
In vivo cellular scale fluorescence lifetime imaging of the mouse retina has the potential to be a sensitive marker of retinal cell health. In this study, we demonstrate fluorescence lifetime imaging of extrinsic fluorophores using adaptive optics fluorescence lifetime imaging ophthalmoscopy (AOFLIO). We recorded AOFLIO images of inner retinal cells labeled with enhanced green fluorescent protein (EGFP) and capillaries labeled with fluorescein. We demonstrate that AOFLIO can be used to differentiate spectrally overlapping fluorophores in the retina. With further refinements, AOFLIO could be used to assess retinal health in early stages of degeneration by utilizing lifetime-based sensors or even fluorophores native to the retina.
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Affiliation(s)
- James A. Feeks
- Center for Visual Science, University of Rochester, Rochester, NY 14627, USA
- The Institute of Optics, University of Rochester, Rochester, NY 14620, USA
| | - Jennifer J. Hunter
- Center for Visual Science, University of Rochester, Rochester, NY 14627, USA
- Flaum Eye Institute, University of Rochester, NY 14642, USA
- Department of Biomedical Engineering, University of Rochester, NY 14627, USA
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15
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Greben M, Valenta J. Note: On the choice of the appropriate excitation-pulse-length for assessment of slow luminescence decays. THE REVIEW OF SCIENTIFIC INSTRUMENTS 2016; 87:126101. [PMID: 28040916 DOI: 10.1063/1.4971368] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/15/2023]
Abstract
The decay-time distribution deduced from luminescence kinetics experiments is, in general, dependent on the excitation pulse length as a direct consequence of different onset dynamics. We demonstrate this effect for the case of square excitation pulses applied to study the luminescence kinetics in Si nanocrystals. The short- and long-pulse limits are defined as 0.1 times the shortest lifetime in the distribution and 3 times the longest time, respectively. Outside these limits the decay-time distribution is independent on the pulse duration. In addition, we describe experimental conditions required to obtain a correct depiction of slow luminescence decay in the μs to ms time range.
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Affiliation(s)
- M Greben
- Department of Chemical Physics and Optics, Faculty of Mathematics and Physics, Charles University, Prague, Czechia
| | - J Valenta
- Department of Chemical Physics and Optics, Faculty of Mathematics and Physics, Charles University, Prague, Czechia
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16
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Xu J, Qiao J, Nie K, Zhang A. Calibration method for the center of mass method to enlarge the solvable range of fluorescence lifetime. JOURNAL OF THE OPTICAL SOCIETY OF AMERICA. A, OPTICS, IMAGE SCIENCE, AND VISION 2016; 33:1961-1969. [PMID: 27828099 DOI: 10.1364/josaa.33.001961] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.1] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/06/2023]
Abstract
This paper presents a calibration method for the center of mass method based on rough rapid lifetime determination (RLD) to enlarge the solvable range of fluorescence lifetime. The proposed method defines the ratio of two photon count numbers as a threshold parameter to characterize the length of the sample lifetime. When detecting long lifetimes beyond the threshold, a raw lifetime is estimated first through RLD. Then the raw lifetime is compensated to get a precise one. Simulation results show the solvable range is extended from T/τ>4 to T/τ>1.5 with less than 1% error. The extended range with 40 dB SNR guaranteed enables higher-frequency laser pulses to solve long lifetimes or incomplete decays and has promising biomedical applications, such as quantum dots.
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17
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Rowley MI, Coolen ACC, Vojnovic B, Barber PR. Robust Bayesian Fluorescence Lifetime Estimation, Decay Model Selection and Instrument Response Determination for Low-Intensity FLIM Imaging. PLoS One 2016; 11:e0158404. [PMID: 27355322 PMCID: PMC4927071 DOI: 10.1371/journal.pone.0158404] [Citation(s) in RCA: 25] [Impact Index Per Article: 2.8] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/18/2016] [Accepted: 06/15/2016] [Indexed: 11/26/2022] Open
Abstract
We present novel Bayesian methods for the analysis of exponential decay data that exploit the evidence carried by every detected decay event and enables robust extension to advanced processing. Our algorithms are presented in the context of fluorescence lifetime imaging microscopy (FLIM) and particular attention has been paid to model the time-domain system (based on time-correlated single photon counting) with unprecedented accuracy. We present estimates of decay parameters for mono- and bi-exponential systems, offering up to a factor of two improvement in accuracy compared to previous popular techniques. Results of the analysis of synthetic and experimental data are presented, and areas where the superior precision of our techniques can be exploited in Förster Resonance Energy Transfer (FRET) experiments are described. Furthermore, we demonstrate two advanced processing methods: decay model selection to choose between differing models such as mono- and bi-exponential, and the simultaneous estimation of instrument and decay parameters.
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Affiliation(s)
- Mark I. Rowley
- Institute for Mathematical and Molecular Biomedicine, King’s College London, London, United Kingdom
| | - Anthonius C. C. Coolen
- Institute for Mathematical and Molecular Biomedicine, King’s College London, London, United Kingdom
| | - Borivoj Vojnovic
- Cancer Research UK and Medical Research Council Oxford Institute for Radiation Oncology, Department of Oncology, University of Oxford, Oxford, United Kingdom
| | - Paul R. Barber
- Institute for Mathematical and Molecular Biomedicine, King’s College London, London, United Kingdom
- Cancer Research UK and Medical Research Council Oxford Institute for Radiation Oncology, Department of Oncology, University of Oxford, Oxford, United Kingdom
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18
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Takahashi N, Sawada W, Noguchi J, Watanabe S, Ucar H, Hayashi-Takagi A, Yagishita S, Ohno M, Tokumaru H, Kasai H. Two-photon fluorescence lifetime imaging of primed SNARE complexes in presynaptic terminals and β cells. Nat Commun 2015; 6:8531. [PMID: 26439845 PMCID: PMC4600761 DOI: 10.1038/ncomms9531] [Citation(s) in RCA: 33] [Impact Index Per Article: 3.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/05/2015] [Accepted: 08/30/2015] [Indexed: 12/30/2022] Open
Abstract
It remains unclear how readiness for Ca(2+)-dependent exocytosis depends on varying degrees of SNARE complex assembly. Here we directly investigate the SNARE assembly using two-photon fluorescence lifetime imaging (FLIM) of Förster resonance energy transfer (FRET) between three pairs of neuronal SNAREs in presynaptic boutons and pancreatic β cells in the islets of Langerhans. These FRET probes functionally rescue their endogenous counterparts, supporting ultrafast exocytosis. We show that trans-SNARE complexes accumulated in the active zone, and estimate the number of complexes associated with each docked vesicle. In contrast, SNAREs were unassembled in resting state, and assembled only shortly prior to insulin exocytosis, which proceeds slowly. We thus demonstrate that distinct states of fusion readiness are associated with SNARE complex formation. Our FRET/FLIM approaches enable optical imaging of fusion readiness in both live and chemically fixed tissues.
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Affiliation(s)
- Noriko Takahashi
- Faculty of Medicine, Laboratory of Structural Physiology, Center for Disease Biology and Integrative Medicine, University of Tokyo, Bunkyo-ku, Tokyo 113-0033, Japan.,CREST, Japan Science and Technology Agency, 4-1-8 Honcho, Kawaguchi, Saitama 332-0012, Japan
| | - Wakako Sawada
- Faculty of Medicine, Laboratory of Structural Physiology, Center for Disease Biology and Integrative Medicine, University of Tokyo, Bunkyo-ku, Tokyo 113-0033, Japan.,CREST, Japan Science and Technology Agency, 4-1-8 Honcho, Kawaguchi, Saitama 332-0012, Japan
| | - Jun Noguchi
- Faculty of Medicine, Laboratory of Structural Physiology, Center for Disease Biology and Integrative Medicine, University of Tokyo, Bunkyo-ku, Tokyo 113-0033, Japan.,CREST, Japan Science and Technology Agency, 4-1-8 Honcho, Kawaguchi, Saitama 332-0012, Japan
| | - Satoshi Watanabe
- Faculty of Medicine, Laboratory of Structural Physiology, Center for Disease Biology and Integrative Medicine, University of Tokyo, Bunkyo-ku, Tokyo 113-0033, Japan.,CREST, Japan Science and Technology Agency, 4-1-8 Honcho, Kawaguchi, Saitama 332-0012, Japan
| | - Hasan Ucar
- Faculty of Medicine, Laboratory of Structural Physiology, Center for Disease Biology and Integrative Medicine, University of Tokyo, Bunkyo-ku, Tokyo 113-0033, Japan.,CREST, Japan Science and Technology Agency, 4-1-8 Honcho, Kawaguchi, Saitama 332-0012, Japan
| | - Akiko Hayashi-Takagi
- Faculty of Medicine, Laboratory of Structural Physiology, Center for Disease Biology and Integrative Medicine, University of Tokyo, Bunkyo-ku, Tokyo 113-0033, Japan.,PRESTO, Japan Science and Technology Agency, 4-1-8 Honcho, Kawaguchi, Saitama 332-0012, Japan
| | - Sho Yagishita
- Faculty of Medicine, Laboratory of Structural Physiology, Center for Disease Biology and Integrative Medicine, University of Tokyo, Bunkyo-ku, Tokyo 113-0033, Japan.,CREST, Japan Science and Technology Agency, 4-1-8 Honcho, Kawaguchi, Saitama 332-0012, Japan
| | - Mitsuyo Ohno
- Faculty of Medicine, Laboratory of Structural Physiology, Center for Disease Biology and Integrative Medicine, University of Tokyo, Bunkyo-ku, Tokyo 113-0033, Japan
| | - Hiroshi Tokumaru
- Faculty of Pharmaceutical Sciences at Kagawa, Tokushima Bunri University, Kagawa 769-2193, Japan
| | - Haruo Kasai
- Faculty of Medicine, Laboratory of Structural Physiology, Center for Disease Biology and Integrative Medicine, University of Tokyo, Bunkyo-ku, Tokyo 113-0033, Japan.,CREST, Japan Science and Technology Agency, 4-1-8 Honcho, Kawaguchi, Saitama 332-0012, Japan
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19
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Michael Gruber J, Chmeliov J, Krüger TPJ, Valkunas L, van Grondelle R. Singlet-triplet annihilation in single LHCII complexes. Phys Chem Chem Phys 2015; 17:19844-53. [PMID: 26156159 PMCID: PMC11289710 DOI: 10.1039/c5cp01806d] [Citation(s) in RCA: 25] [Impact Index Per Article: 2.5] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/27/2015] [Accepted: 06/28/2015] [Indexed: 08/02/2024]
Abstract
In light harvesting complex II (LHCII) of higher plants and green algae, carotenoids (Cars) have an important function to quench chlorophyll (Chl) triplet states and therefore avoid the production of harmful singlet oxygen. The resulting Car triplet states lead to a non-linear self-quenching mechanism called singlet-triplet (S-T) annihilation that strongly depends on the excitation density. In this work we investigated the fluorescence decay kinetics of single immobilized LHCIIs at room temperature and found a two-exponential decay with a slow (3.5 ns) and a fast (35 ps) component. The relative amplitude fraction of the fast component increases with increasing excitation intensity, and the resulting decrease in the fluorescence quantum yield suggests annihilation effects. Modulation of the excitation pattern by means of an acousto-optic modulator (AOM) furthermore allowed us to resolve the time-dependent accumulation and decay rate (∼7 μs) of the quenching species. Inspired by singlet-singlet (S-S) annihilation studies, we developed a stochastic model and then successfully applied it to describe and explain all the experimentally observed steady-state and time-dependent kinetics. That allowed us to distinctively identify the quenching mechanism as S-T annihilation. Quantitative fitting resulted in a conclusive set of parameters validating our interpretation of the experimental results. The obtained stochastic model can be generalized to describe S-T annihilation in small molecular aggregates where the equilibration time of excitations is much faster than the annihilation-free singlet excited state lifetime.
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Affiliation(s)
- J. Michael Gruber
- Department of Biophysics, Faculty of Sciences, Vrije UniversiteitDe Boeleaan 10811081HV AmsterdamThe Netherlands
| | - Jevgenij Chmeliov
- Department of Theoretical Physics, Faculty of Physics, Vilnius UniversitySaulėtekio Ave. 9LT-10222 VilniusLithuania
- Institute of Physics, Center for Physical Sciences and TechnologyGoštauto 11LT-01108 VilniusLithuania
| | - Tjaart P. J. Krüger
- Department of Physics, Faculty of Natural and Agricultural Sciences, University of PretoriaPrivate bag X20Hatfield 0028South Africa
| | - Leonas Valkunas
- Department of Theoretical Physics, Faculty of Physics, Vilnius UniversitySaulėtekio Ave. 9LT-10222 VilniusLithuania
- Institute of Physics, Center for Physical Sciences and TechnologyGoštauto 11LT-01108 VilniusLithuania
| | - Rienk van Grondelle
- Department of Biophysics, Faculty of Sciences, Vrije UniversiteitDe Boeleaan 10811081HV AmsterdamThe Netherlands
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20
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Klemm M, Schweitzer D, Peters S, Sauer L, Hammer M, Haueisen J. FLIMX: A Software Package to Determine and Analyze the Fluorescence Lifetime in Time-Resolved Fluorescence Data from the Human Eye. PLoS One 2015; 10:e0131640. [PMID: 26192624 PMCID: PMC4507995 DOI: 10.1371/journal.pone.0131640] [Citation(s) in RCA: 35] [Impact Index Per Article: 3.5] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/21/2014] [Accepted: 06/04/2015] [Indexed: 02/02/2023] Open
Abstract
Fluorescence lifetime imaging ophthalmoscopy (FLIO) is a new technique for measuring the in vivo autofluorescence intensity decays generated by endogenous fluorophores in the ocular fundus. Here, we present a software package called FLIM eXplorer (FLIMX) for analyzing FLIO data. Specifically, we introduce a new adaptive binning approach as an optimal tradeoff between the spatial resolution and the number of photons required per pixel. We also expand existing decay models (multi-exponential, stretched exponential, spectral global analysis, incomplete decay) to account for the layered structure of the eye and present a method to correct for the influence of the crystalline lens fluorescence on the retina fluorescence. Subsequently, the Holm-Bonferroni method is applied to FLIO measurements to allow for group comparisons between patients and controls on the basis of fluorescence lifetime parameters. The performance of the new approaches was evaluated in five experiments. Specifically, we evaluated static and adaptive binning in a diabetes mellitus patient, we compared the different decay models in a healthy volunteer and performed a group comparison between diabetes patients and controls. An overview of the visualization capabilities and a comparison of static and adaptive binning is shown for a patient with macular hole. FLIMX’s applicability to fluorescence lifetime imaging microscopy is shown in the ganglion cell layer of a porcine retina sample, obtained by a laser scanning microscope using two-photon excitation.
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Affiliation(s)
- Matthias Klemm
- Institute of Biomedical Engineering and Informatics, Technische Universität Ilmenau, POB 100565, 98694, Ilmenau, Germany
- * E-mail:
| | - Dietrich Schweitzer
- Experimental Ophthalmology, University Hospital Jena, Bachstraße 18, 07740, Jena, Germany
| | - Sven Peters
- Experimental Ophthalmology, University Hospital Jena, Bachstraße 18, 07740, Jena, Germany
| | - Lydia Sauer
- Experimental Ophthalmology, University Hospital Jena, Bachstraße 18, 07740, Jena, Germany
| | - Martin Hammer
- Experimental Ophthalmology, University Hospital Jena, Bachstraße 18, 07740, Jena, Germany
| | - Jens Haueisen
- Institute of Biomedical Engineering and Informatics, Technische Universität Ilmenau, POB 100565, 98694, Ilmenau, Germany
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22
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Kristoffersen AS, Erga SR, Hamre B, Frette Ø. Testing fluorescence lifetime standards using two-photon excitation and time-domain instrumentation: rhodamine B, coumarin 6 and lucifer yellow. J Fluoresc 2014; 24:1015-24. [PMID: 24866152 PMCID: PMC4070492 DOI: 10.1007/s10895-014-1368-1] [Citation(s) in RCA: 79] [Impact Index Per Article: 7.2] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/13/2013] [Accepted: 02/24/2014] [Indexed: 11/25/2022]
Abstract
Having good information about fluorescence lifetime standards is essential for anyone performing lifetime experiments. Using lifetime standards in fluorescence spectroscopy is often regarded as a straightforward process, however, many earlier reports are limited in terms of lifetime concentration dependency, solvents and other technical aspects. We have investigated the suitability of the fluorescent dyes rhodamine B, coumarin 6, and lucifer yellow as lifetime standards, especially to be used with two-photon excitation measurements in the time-domain. We measured absorption and emission spectra for the fluorophores to determine which wavelengths we should use for the excitation and an appropriate detector range. We also measured lifetimes for different concentrations, ranging from 10(-2)- 10(-6) M, in both water, ethanol and methanol solutions. We observed that rhodamine B lifetimes depend strongly on concentration. Coumarin 6 provided the most stable lifetimes, with a negligible dependency on concentration and solvent. Lucifer yellow lifetimes were also found to depend little with concentration. Finally, we found that a mix of two fluorophores (rhodamine B/coumarin 6, rhodamine B/lucifer yellow, and coumarin 6/lucifer yellow) all yielded very similar lifetimes from a double-exponential decay as the separate lifetimes measured from a single-exponential decay. All lifetime measurements were made using two-photon excitation and obtaining lifetime data in the time-domain using time-correlated single-photon counting.
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Affiliation(s)
- Arne S Kristoffersen
- Department of Physics and Technology, University of Bergen, P. O. Box 7803, N-5020, Bergen, Norway,
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23
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Fereidouni F, Reitsma K, Gerritsen HC. High speed multispectral fluorescence lifetime imaging. OPTICS EXPRESS 2013; 21:11769-82. [PMID: 23736399 DOI: 10.1364/oe.21.011769] [Citation(s) in RCA: 23] [Impact Index Per Article: 1.9] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/18/2023]
Abstract
We report a spectrally resolved fluorescence lifetime imaging system based on time gated single photon detection with a fixed gate width of 200 ps and 7 spectral channels. Time gated systems can operate at high count rates but usually have large gate widths and sample only part of the fluorescence decay curve. In the system presented in this work, the fluorescence signal is sampled using a high speed transceiver. An error analysis is carried out to characterize the performance of both lifetime and spectral detection. The effect of gate width and spectral channel width on the accuracy of estimated lifetimes and spectral widths is described. The performance of the whole instrument is evaluated at count rates of up to 12 MHz. Accurate fluorescence lifetimes (error < 2%) are recorded at count rates as high as 5 MHz. This is limited by the PMT performance, not by the electronics. Analysis of the large spectral lifetime image sets is challenging and time-consuming. Here, we demonstrate the use of lifetime and spectral phasors for analyzing images of fibroblast cells with 2 different labeled components. The phasor approach provides a fast and intuitive way of analyzing the results of spectrally resolved fluorescence lifetime imaging experiments.
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Affiliation(s)
- Farzad Fereidouni
- Molecular Biophysics, Debye Institute, Utrecht University, Utrecht, The Netherlands
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24
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Carlini L, Nadeau JL. Uptake and processing of semiconductor quantum dots in living cells studied by fluorescence lifetime imaging microscopy (FLIM). Chem Commun (Camb) 2013; 49:1714-6. [DOI: 10.1039/c3cc36326k] [Citation(s) in RCA: 15] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
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25
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Tsikouras A, Ning J, Ng S, Berman R, Andrews DW, Fang Q. Streak camera crosstalk reduction using a multiple delay optical fiber bundle. OPTICS LETTERS 2012; 37:250-2. [PMID: 22854483 DOI: 10.1364/ol.37.000250] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/25/2023]
Abstract
The streak camera is one of the fastest photodetection systems, while its capability of multiplexing is particularly attractive to many applications requiring parallel data acquisition. The degree of multiplexing in a streak camera is limited by the crosstalk between input channels. We developed a technique that introducing a fixed time delay between adjacent fiber channels in a customized two-dimensional to one-dimensional fiber array to significantly reduce crosstalk both at the sample plane and at the input of a streak camera. A prototype system has been developed that supports 100 input channels, and its performance in fluorescence microscopy is demonstrated.
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Affiliation(s)
- Anthony Tsikouras
- Department of Engineering Physics, McMaster University, Hamilton, Ontario, Canada
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