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For: Iqbal SA, Wallach JD, Khoury MJ, Schully SD, Ioannidis JPA. Reproducible Research Practices and Transparency across the Biomedical Literature. PLoS Biol 2016;14:e1002333. [PMID: 26726926 PMCID: PMC4699702 DOI: 10.1371/journal.pbio.1002333] [Citation(s) in RCA: 191] [Impact Index Per Article: 21.2] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/13/2015] [Accepted: 11/19/2015] [Indexed: 11/30/2022]  Open
Number Cited by Other Article(s)
1
Mak HW, Cheung CK, Lau J, Chan SC, Li PH. Transparency, Reproducibility, and Accessibility of Clinical and Experimental Studies in Allergy (TRACES): Study design and protocol. THE JOURNAL OF ALLERGY AND CLINICAL IMMUNOLOGY. GLOBAL 2025;4:100447. [PMID: 40207289 PMCID: PMC11981735 DOI: 10.1016/j.jacig.2025.100447] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 09/10/2024] [Revised: 11/18/2024] [Accepted: 12/27/2024] [Indexed: 04/11/2025]
2
Yii MCH, Cobourne MT, Pandis N, Seehra J. Research transparency in articles published in orthodontic journals: is it clear? Eur J Orthod 2025;47:cjaf028. [PMID: 40353445 DOI: 10.1093/ejo/cjaf028] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 05/14/2025]
3
Heckerman GO, Tzng E, Campos-Melendez A, Ekwueme C, Mueller A. Transparency of research practices in cardiovascular literature. eLife 2025;14:e81051. [PMID: 40135605 PMCID: PMC12068865 DOI: 10.7554/elife.81051] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/14/2022] [Accepted: 03/17/2025] [Indexed: 03/27/2025]  Open
4
El Kababji S, Mitsakakis N, Jonker E, Beltran-Bless AA, Pond G, Vandermeer L, Radhakrishnan D, Mosquera L, Paterson A, Shepherd L, Chen B, Barlow W, Gralow J, Savard MF, Fesl C, Hlauschek D, Balic M, Rinnerthaler G, Greil R, Gnant M, Clemons M, El Emam K. Augmenting Insufficiently Accruing Oncology Clinical Trials Using Generative Models: Validation Study. J Med Internet Res 2025;27:e66821. [PMID: 40053790 PMCID: PMC11923467 DOI: 10.2196/66821] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/24/2024] [Revised: 12/27/2024] [Accepted: 01/31/2025] [Indexed: 03/09/2025]  Open
5
Jiang L, Lan M, Menke JD, Vorland CJ, Kilicoglu H. Text classification models for assessing the completeness of randomized controlled trial publications based on CONSORT reporting guidelines. Sci Rep 2024;14:21721. [PMID: 39289403 PMCID: PMC11408668 DOI: 10.1038/s41598-024-72130-7] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/03/2024] [Accepted: 09/04/2024] [Indexed: 09/19/2024]  Open
6
Prado MC, Dotto L, Agostini B, Sarkis-Onofre R. Assessing transparency practices in dental randomized controlled trials. BMC Med Res Methodol 2024;24:185. [PMID: 39182028 PMCID: PMC11344353 DOI: 10.1186/s12874-024-02316-0] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/04/2024] [Accepted: 08/21/2024] [Indexed: 08/27/2024]  Open
7
Wendelborn C, Anger M, Schickhardt C. Promoting Data Sharing: The Moral Obligations of Public Funding Agencies. SCIENCE AND ENGINEERING ETHICS 2024;30:35. [PMID: 39105890 PMCID: PMC11303567 DOI: 10.1007/s11948-024-00491-3] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 10/21/2022] [Accepted: 06/08/2024] [Indexed: 08/07/2024]
8
Moreau D, Wiebels K. Nine quick tips for open meta-analyses. PLoS Comput Biol 2024;20:e1012252. [PMID: 39052540 PMCID: PMC11271959 DOI: 10.1371/journal.pcbi.1012252] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 07/27/2024]  Open
9
Brown RE. Measuring the replicability of our own research. J Neurosci Methods 2024;406:110111. [PMID: 38521128 DOI: 10.1016/j.jneumeth.2024.110111] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/21/2024] [Revised: 03/08/2024] [Accepted: 03/18/2024] [Indexed: 03/25/2024]
10
Bellomo RK, Zavalis EA, Ioannidis JPA. Assessment of transparency indicators in space medicine. PLoS One 2024;19:e0300701. [PMID: 38564591 PMCID: PMC10986997 DOI: 10.1371/journal.pone.0300701] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/08/2024] [Accepted: 03/04/2024] [Indexed: 04/04/2024]  Open
11
Jiang L, Lan M, Menke JD, Vorland CJ, Kilicoglu H. CONSORT-TM: Text classification models for assessing the completeness of randomized controlled trial publications. MEDRXIV : THE PREPRINT SERVER FOR HEALTH SCIENCES 2024:2024.03.31.24305138. [PMID: 38633775 PMCID: PMC11023672 DOI: 10.1101/2024.03.31.24305138] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 04/19/2024]
12
Hankenson FC, Prager EM, Berridge BR. Advocating for Generalizability: Accepting Inherent Variability in Translation of Animal Research Outcomes. Annu Rev Anim Biosci 2024;12:391-410. [PMID: 38358839 DOI: 10.1146/annurev-animal-021022-043531] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 02/17/2024]
13
Hochheimer CJ, Bosma GN, Gunn-Sandell L, Sammel MD. Reproducible research practices: A tool for effective and efficient leadership in collaborative statistics. Stat (Int Stat Inst) 2024;13:e653. [PMID: 39238941 PMCID: PMC11376350 DOI: 10.1002/sta4.653] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Download PDF] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/21/2023] [Accepted: 01/10/2024] [Indexed: 09/07/2024]
14
Bullock GS, Ward P, Impellizzeri FM, Kluzek S, Hughes T, Hillman C, Waterman BR, Danelson K, Henry K, Barr E, Healy K, Räisänen AM, Gomez C, Fernandez G, Wolf J, Nicholson KF, Sell T, Zerega R, Dhiman P, Riley RD, Collins GS. Up Front and Open? Shrouded in Secrecy? Or Somewhere in Between? A Meta-Research Systematic Review of Open Science Practices in Sport Medicine Research. J Orthop Sports Phys Ther 2023;53:735-747. [PMID: 37860866 DOI: 10.2519/jospt.2023.12016] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Submit a Manuscript] [Subscribe] [Scholar Register] [Indexed: 10/21/2023]
15
Lubega N, Anderson A, Nelson NC. Experience of irreproducibility as a risk factor for poor mental health in biomedical science doctoral students: A survey and interview-based study. PLoS One 2023;18:e0293584. [PMID: 37967083 PMCID: PMC10651026 DOI: 10.1371/journal.pone.0293584] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/05/2022] [Accepted: 10/08/2023] [Indexed: 11/17/2023]  Open
16
Carvalho RM, de Magalhães-Barbosa MC, Bianchi LM, Rodrigues-Santos G, da Cunha AJLA, Bastos FI, Prata-Barbosa A. Shift in hospital opioid use during the COVID-19 pandemic in Brazil: a time-series analysis of one million prescriptions. Sci Rep 2023;13:17197. [PMID: 37821638 PMCID: PMC10567754 DOI: 10.1038/s41598-023-44533-5] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/28/2023] [Accepted: 10/10/2023] [Indexed: 10/13/2023]  Open
17
Kocak B, Yardimci AH, Yuzkan S, Keles A, Altun O, Bulut E, Bayrak ON, Okumus AA. Transparency in Artificial Intelligence Research: a Systematic Review of Availability Items Related to Open Science in Radiology and Nuclear Medicine. Acad Radiol 2023;30:2254-2266. [PMID: 36526532 DOI: 10.1016/j.acra.2022.11.030] [Citation(s) in RCA: 4] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/26/2022] [Revised: 11/21/2022] [Accepted: 11/22/2022] [Indexed: 12/15/2022]
18
van 't Hooft J, van Dijk CE, Axfors C, Alfirevic Z, Oudijk MA, Mol BWJ, Bossuyt PM, Ioannidis JPA. Few randomized trials in preterm birth prevention meet predefined usefulness criteria. J Clin Epidemiol 2023;162:107-117. [PMID: 37657614 DOI: 10.1016/j.jclinepi.2023.08.016] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/25/2023] [Revised: 07/03/2023] [Accepted: 08/24/2023] [Indexed: 09/03/2023]
19
Kilicoglu H, Jiang L, Hoang L, Mayo-Wilson E, Vinkers CH, Otte WM. Methodology reporting improved over time in 176,469 randomized controlled trials. J Clin Epidemiol 2023;162:19-28. [PMID: 37562729 PMCID: PMC10829891 DOI: 10.1016/j.jclinepi.2023.08.004] [Citation(s) in RCA: 9] [Impact Index Per Article: 4.5] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/16/2023] [Revised: 07/25/2023] [Accepted: 08/02/2023] [Indexed: 08/12/2023]
20
El Kababji S, Mitsakakis N, Fang X, Beltran-Bless AA, Pond G, Vandermeer L, Radhakrishnan D, Mosquera L, Paterson A, Shepherd L, Chen B, Barlow WE, Gralow J, Savard MF, Clemons M, El Emam K. Evaluating the Utility and Privacy of Synthetic Breast Cancer Clinical Trial Data Sets. JCO Clin Cancer Inform 2023;7:e2300116. [PMID: 38011617 PMCID: PMC10703127 DOI: 10.1200/cci.23.00116] [Citation(s) in RCA: 8] [Impact Index Per Article: 4.0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/19/2023] [Revised: 08/24/2023] [Accepted: 09/19/2023] [Indexed: 11/29/2023]  Open
21
Zavalis EA, Contopoulos-Ioannidis DG, Ioannidis JPA. Transparency in Infectious Disease Research: Meta-research Survey of Specialty Journals. J Infect Dis 2023;228:227-234. [PMID: 37132475 DOI: 10.1093/infdis/jiad130] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/19/2022] [Revised: 02/24/2023] [Accepted: 05/01/2023] [Indexed: 05/04/2023]  Open
22
Zhao L, Shen C, Liu M, Zhang J, Cheng L, Li Y, Yuan L, Zhang J, Tian J. Comparison of Reporting and Transparency in Published Protocols and Publications in Umbrella Reviews: Scoping Review. J Med Internet Res 2023;25:e43299. [PMID: 37531172 PMCID: PMC10433027 DOI: 10.2196/43299] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/07/2022] [Revised: 02/15/2023] [Accepted: 05/05/2023] [Indexed: 08/03/2023]  Open
23
Hamilton DG, Hong K, Fraser H, Rowhani-Farid A, Fidler F, Page MJ. Prevalence and predictors of data and code sharing in the medical and health sciences: systematic review with meta-analysis of individual participant data. BMJ 2023;382:e075767. [PMID: 37433624 PMCID: PMC10334349 DOI: 10.1136/bmj-2023-075767] [Citation(s) in RCA: 12] [Impact Index Per Article: 6.0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Submit a Manuscript] [Subscribe] [Scholar Register] [Accepted: 06/07/2023] [Indexed: 07/13/2023]
24
Sparks AH, Ponte EMD, Alves KS, Foster ZSL, Grünwald NJ. Openness and Computational Reproducibility in Plant Pathology: Where We Stand and a Way Forward. PHYTOPATHOLOGY 2023;113:1159-1170. [PMID: 36624724 DOI: 10.1094/phyto-10-21-0430-per] [Citation(s) in RCA: 4] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/17/2023]
25
Louderback ER, Gainsbury SM, Heirene RM, Amichia K, Grossman A, Bernhard BJ, LaPlante DA. Open Science Practices in Gambling Research Publications (2016-2019): A Scoping Review. J Gambl Stud 2023;39:987-1011. [PMID: 35678905 PMCID: PMC9178323 DOI: 10.1007/s10899-022-10120-y] [Citation(s) in RCA: 4] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Accepted: 03/20/2022] [Indexed: 12/04/2022]
26
Haven TL, Abunijela S, Hildebrand N. Biomedical supervisors' role modeling of open science practices. eLife 2023;12:83484. [PMID: 37211820 DOI: 10.7554/elife.83484] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/15/2022] [Accepted: 05/04/2023] [Indexed: 05/23/2023]  Open
27
Li S, Litvin V, Manski CF. Partial Identification of Personalized Treatment Response with Trial-reported Analyses of Binary Subgroups. Epidemiology 2023;34:319-324. [PMID: 36715981 DOI: 10.1097/ede.0000000000001593] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/31/2023]
28
Yeung AWK, Robertson M, Uecker A, Fox PT, Eickhoff SB. Trends in the sample size, statistics, and contributions to the BrainMap database of activation likelihood estimation meta-analyses: An empirical study of 10-year data. Hum Brain Mapp 2023;44:1876-1887. [PMID: 36479854 PMCID: PMC9980884 DOI: 10.1002/hbm.26177] [Citation(s) in RCA: 11] [Impact Index Per Article: 5.5] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/26/2022] [Revised: 11/18/2022] [Accepted: 11/28/2022] [Indexed: 12/13/2022]  Open
29
Buzbas EO, Devezer B, Baumgaertner B. The logical structure of experiments lays the foundation for a theory of reproducibility. ROYAL SOCIETY OPEN SCIENCE 2023;10:221042. [PMID: 36938532 PMCID: PMC10014247 DOI: 10.1098/rsos.221042] [Citation(s) in RCA: 2] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 08/11/2022] [Accepted: 02/02/2023] [Indexed: 06/18/2023]
30
Lauterbach S, Dienhart H, Range J, Malzacher S, Spöring JD, Rother D, Pinto MF, Martins P, Lagerman CE, Bommarius AS, Høst AV, Woodley JM, Ngubane S, Kudanga T, Bergmann FT, Rohwer JM, Iglezakis D, Weidemann A, Wittig U, Kettner C, Swainston N, Schnell S, Pleiss J. EnzymeML: seamless data flow and modeling of enzymatic data. Nat Methods 2023;20:400-402. [PMID: 36759590 DOI: 10.1038/s41592-022-01763-1] [Citation(s) in RCA: 10] [Impact Index Per Article: 5.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/04/2020] [Accepted: 12/21/2022] [Indexed: 02/11/2023]
31
Déglin SE, Burstyn I, Chen CL, Miller DJ, Gribble MO, Hamade AK, Chang ET, Avanasi R, Boon D, Reed J. Considerations towards the better integration of epidemiology into quantitative risk assessment. GLOBAL EPIDEMIOLOGY 2022;4:100084. [PMID: 37637021 PMCID: PMC10445996 DOI: 10.1016/j.gloepi.2022.100084] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/23/2022] [Accepted: 09/07/2022] [Indexed: 11/16/2022]  Open
32
Chiriboga L, Callis GM, Wang Y, Chlipala E. Guide for collecting and reporting metadata on protocol variables and parameters from slide-based histotechnology assays to enhance reproducibility. J Histotechnol 2022;45:132-147. [DOI: 10.1080/01478885.2022.2134022] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/05/2022]
33
Zavalis EA, Ioannidis JPA. A meta-epidemiological assessment of transparency indicators of infectious disease models. PLoS One 2022;17:e0275380. [PMID: 36206207 PMCID: PMC9543956 DOI: 10.1371/journal.pone.0275380] [Citation(s) in RCA: 8] [Impact Index Per Article: 2.7] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/16/2022] [Accepted: 09/15/2022] [Indexed: 01/04/2023]  Open
34
Casas AI, Hassan AA, Manz Q, Wiwie C, Kleikers P, Egea J, López MG, List M, Baumbach J, Schmidt HHHW. Un-biased housekeeping gene panel selection for high-validity gene expression analysis. Sci Rep 2022;12:12324. [PMID: 35853974 PMCID: PMC9296577 DOI: 10.1038/s41598-022-15989-8] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/09/2021] [Accepted: 07/04/2022] [Indexed: 12/02/2022]  Open
35
Transparent and Reproducible Research Practices in the Surgical Literature. J Surg Res 2022;274:116-124. [PMID: 35150944 DOI: 10.1016/j.jss.2021.09.024] [Citation(s) in RCA: 4] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/20/2020] [Revised: 08/23/2021] [Accepted: 09/20/2021] [Indexed: 11/23/2022]
36
Obiora OL, Olivier B, Shead DA, Withers A. Data sharing practices of health researchers in Africa: a scoping review protocol. JBI Evid Synth 2022;20:681-688. [PMID: 34494610 DOI: 10.11124/jbies-20-00502] [Citation(s) in RCA: 10] [Impact Index Per Article: 3.3] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/31/2022]
37
Thibault RT, Munafò MR, Moher D. Rigour and reproducibility in Canadian research: call for a coordinated approach. Facets (Ott) 2022. [DOI: 10.1139/facets-2021-0162] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/22/2022]  Open
38
Shukla R, Yadav AK, Sote WO, Junior MC, Singh TR. Systems biology and big data analytics. Bioinformatics 2022. [DOI: 10.1016/b978-0-323-89775-4.00005-5] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/20/2022]  Open
39
Hardwicke TE, Thibault RT, Kosie JE, Wallach JD, Kidwell MC, Ioannidis JPA. Estimating the Prevalence of Transparency and Reproducibility-Related Research Practices in Psychology (2014-2017). PERSPECTIVES ON PSYCHOLOGICAL SCIENCE 2022;17:239-251. [PMID: 33682488 PMCID: PMC8785283 DOI: 10.1177/1745691620979806] [Citation(s) in RCA: 42] [Impact Index Per Article: 14.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/16/2022]
40
Varangot-Reille C, Suso-Martí L, Romero-Palau M, Suárez-Pastor P, Cuenca-Martínez F. Effects of Different Therapeutic Exercise Modalities on Migraine or Tension-Type Headache: A Systematic Review and Meta-Analysis with a Replicability Analysis. THE JOURNAL OF PAIN 2021;23:1099-1122. [PMID: 34929374 DOI: 10.1016/j.jpain.2021.12.003] [Citation(s) in RCA: 33] [Impact Index Per Article: 8.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 01/22/2021] [Revised: 09/09/2021] [Accepted: 12/15/2021] [Indexed: 12/11/2022]
41
Meid AD. Teaching reproducible research for medical students and postgraduate pharmaceutical scientists. BMC Res Notes 2021;14:445. [PMID: 34886890 PMCID: PMC8656016 DOI: 10.1186/s13104-021-05862-8] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/07/2021] [Accepted: 11/26/2021] [Indexed: 11/10/2022]  Open
42
Cross S, Rho Y, Reddy H, Pepperrell T, Rodgers F, Osborne R, Eni-Olotu A, Banerjee R, Wimmer S, Keestra S. Who funded the research behind the Oxford-AstraZeneca COVID-19 vaccine? BMJ Glob Health 2021;6:e007321. [PMID: 34937701 PMCID: PMC8704023 DOI: 10.1136/bmjgh-2021-007321] [Citation(s) in RCA: 26] [Impact Index Per Article: 6.5] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/20/2021] [Accepted: 11/17/2021] [Indexed: 11/03/2022]  Open
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Ávila DL, Nunes NAM, Almeida PHRF, Gomes JAS, Rosa COB, Alvarez-Leite JI. Signaling Targets Related to Antiobesity Effects of Capsaicin: A Scoping Review. Adv Nutr 2021;12:2232-2243. [PMID: 34171094 PMCID: PMC8634413 DOI: 10.1093/advances/nmab064] [Citation(s) in RCA: 10] [Impact Index Per Article: 2.5] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/28/2020] [Revised: 02/22/2021] [Accepted: 05/03/2021] [Indexed: 01/01/2023]  Open
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Paez A. Reproducibility of Research During COVID-19: Examining the Case of Population Density and the Basic Reproductive Rate from the Perspective of Spatial Analysis. GEOGRAPHICAL ANALYSIS 2021;54:GEAN12307. [PMID: 34898693 PMCID: PMC8652856 DOI: 10.1111/gean.12307] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 06/09/2021] [Revised: 09/15/2021] [Accepted: 09/28/2021] [Indexed: 06/14/2023]
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Pennington CR, Jones A, Bartlett JE, Copeland A, Shaw DJ. Raising the bar: improving methodological rigour in cognitive alcohol research. Addiction 2021;116:3243-3251. [PMID: 33999479 DOI: 10.1111/add.15563] [Citation(s) in RCA: 5] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Submit a Manuscript] [Subscribe] [Scholar Register] [Received: 10/22/2020] [Revised: 01/29/2021] [Accepted: 04/28/2021] [Indexed: 01/31/2023]
46
Khouri C, Revol B, Lepelley M, Mouffak A, Bernardeau C, Salvo F, Pariente A, Roustit M, Cracowski JL. A meta-epidemiological study found lack of transparency and poor reporting of disproportionality analyses for signal detection in pharmacovigilance databases. J Clin Epidemiol 2021;139:191-198. [PMID: 34329725 DOI: 10.1016/j.jclinepi.2021.07.014] [Citation(s) in RCA: 26] [Impact Index Per Article: 6.5] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/12/2021] [Revised: 07/08/2021] [Accepted: 07/22/2021] [Indexed: 12/18/2022]
47
Hamilton DG, Fraser H, Fidler F, McDonald S, Rowhani-Farid A, Hong K, Page MJ. Rates and predictors of data and code sharing in the medical and health sciences: Protocol for a systematic review and individual participant data meta-analysis. F1000Res 2021;10:491. [PMID: 34631024 PMCID: PMC8485098 DOI: 10.12688/f1000research.53874.2] [Citation(s) in RCA: 4] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Journal Information] [Submit a Manuscript] [Subscribe] [Scholar Register] [Accepted: 09/01/2021] [Indexed: 01/06/2023]  Open
48
Kourou K, Exarchos KP, Papaloukas C, Sakaloglou P, Exarchos T, Fotiadis DI. Applied machine learning in cancer research: A systematic review for patient diagnosis, classification and prognosis. Comput Struct Biotechnol J 2021;19:5546-5555. [PMID: 34712399 PMCID: PMC8523813 DOI: 10.1016/j.csbj.2021.10.006] [Citation(s) in RCA: 28] [Impact Index Per Article: 7.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/20/2021] [Revised: 10/04/2021] [Accepted: 10/04/2021] [Indexed: 02/08/2023]  Open
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Randomization, blinding, data handling and sample size estimation in papers published in Veterinary Anaesthesia and Analgesia in 2009 and 2019. Vet Anaesth Analg 2021;49:18-25. [PMID: 34696985 DOI: 10.1016/j.vaa.2021.09.004] [Citation(s) in RCA: 5] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/10/2021] [Revised: 09/17/2021] [Accepted: 09/17/2021] [Indexed: 11/22/2022]
50
Ma L, Peterson EA, Shin IJ, Muesse J, Marino K, Steliga MA, Johann DJ. NPARS-A Novel Approach to Address Accuracy and Reproducibility in Genomic Data Science. Front Big Data 2021;4:725095. [PMID: 34647017 PMCID: PMC8503682 DOI: 10.3389/fdata.2021.725095] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/14/2021] [Accepted: 09/07/2021] [Indexed: 11/13/2022]  Open
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