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Sohn SI, Thamilarasan SK, Pandian S, Oh YJ, Ryu TH, Lee GS, Shin EK. Interspecific Hybridization of Transgenic Brassica napus and Brassica rapa-An Overview. Genes (Basel) 2022; 13:genes13081442. [PMID: 36011353 PMCID: PMC9407623 DOI: 10.3390/genes13081442] [Citation(s) in RCA: 6] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/09/2022] [Revised: 08/12/2022] [Accepted: 08/12/2022] [Indexed: 11/16/2022] Open
Abstract
In nature, interspecific hybridization occurs frequently and can contribute to the production of new species or the introgression of beneficial adaptive features between species. It has great potential in agricultural systems to boost the process of targeted crop improvement. In the advent of genetically modified (GM) crops, it has a disadvantage that it involves the transgene escaping to unintended plants, which could result in non-specific weedy crops. Several crop species in the Brassica genus have close kinship: canola (Brassica napus) is an ancestral hybrid of B. rapa and B. oleracea and mustard species such as B. juncea, B. carinata, and B. nigra share common genomes. Hence, intraspecific hybridization among the Brassica species is most common, especially between B. napus and B. rapa. In general, interspecific hybrids cause numerous genetic and phenotypic changes in the parental lines. Consequently, their fitness and reproductive ability are also highly varied. In this review, we discuss the interspecific hybridization and reciprocal hybridization studies of B. napus and B. rapa and their potential in the controlled environment. Further, we address the fate of transgenes (herbicide resistance) and their ability to transfer to their progenies or generations. This could help us to understand the environmental influence of interspecific hybrids and how to effectively manage their transgene escape in the future.
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Affiliation(s)
- Soo-In Sohn
- Department of Agricultural Biotechnology, National Institute of Agricultural Sciences, Rural Development Administration, Jeonju 54874, Korea
- Correspondence: ; Tel.: +82-063-238-4712
| | - Senthil Kumar Thamilarasan
- Department of Agricultural Biotechnology, National Institute of Agricultural Sciences, Rural Development Administration, Jeonju 54874, Korea
| | - Subramani Pandian
- Department of Agricultural Biotechnology, National Institute of Agricultural Sciences, Rural Development Administration, Jeonju 54874, Korea
| | - Young-Ju Oh
- Institute for Future Environment Ecology Co., Ltd., Jeonju 54883, Korea
| | - Tae-Hun Ryu
- Department of Agricultural Biotechnology, National Institute of Agricultural Sciences, Rural Development Administration, Jeonju 54874, Korea
| | - Gang-Seob Lee
- Department of Agricultural Biotechnology, National Institute of Agricultural Sciences, Rural Development Administration, Jeonju 54874, Korea
| | - Eun-Kyoung Shin
- Department of Agricultural Biotechnology, National Institute of Agricultural Sciences, Rural Development Administration, Jeonju 54874, Korea
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Liu Y, Zhang YX, Song SQ, Li J, Neal Stewart C, Wei W, Zhao Y, Wang WQ. A proteomic analysis of seeds from Bt-transgenic Brassica napus and hybrids with wild B. juncea. Sci Rep 2015; 5:15480. [PMID: 26486652 PMCID: PMC4614387 DOI: 10.1038/srep15480] [Citation(s) in RCA: 9] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/08/2015] [Accepted: 09/28/2015] [Indexed: 11/13/2022] Open
Abstract
Transgene insertions might have unintended side effects on the transgenic host, both crop and hybrids with wild relatives that harbor transgenes. We employed proteomic approaches to assess protein abundance changes in seeds from Bt-transgenic oilseed rape (Brassica napus) and its hybrids with wild mustard (B. juncea). A total of 24, 15 and 34 protein spots matching to 23, 13 and 31 unique genes were identified that changed at least 1.5 fold (p < 0.05, Student’s t-test) in abundance between transgenic (tBN) and non-transgenic (BN) oilseed rape, between hybrids of B. juncea (BJ) × tBN (BJtBN) and BJ × BN (BJBN) and between BJBN and BJ, respectively. Eight proteins had higher abundance in tBN than in BN. None of these proteins was toxic or nutritionally harmful to human health, which is not surprising since the seeds are not known to produce toxic proteins. Protein spots varying in abundance between BJtBN and BJBN seeds were the same or homologous to those in the respective parents. None of the differentially-accumulated proteins between BJtBN and BJBN were identical to those between tBN and BN. Results indicated that unintended effects resulted from transgene flow fell within the range of natural variability of hybridization and those found in the native host proteomes.
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Affiliation(s)
- Yongbo Liu
- State Key Laboratory of Environmental Criteria and Risk Assessment, Chinese Research Academy of Environmental Sciences, 8 Dayangfang, Beijing 100012, China
| | - Ying-Xue Zhang
- Key Laboratory of Plant Resources and Beijing Botanical Garden, Institute of Botany, Chinese Academy of Sciences, Beijing 100093, China.,College of Chemistry and Chemical Engineering, Henan University, Kaifeng, 475001, China
| | - Song-Quan Song
- Key Laboratory of Plant Resources and Beijing Botanical Garden, Institute of Botany, Chinese Academy of Sciences, Beijing 100093, China
| | - Junsheng Li
- State Key Laboratory of Environmental Criteria and Risk Assessment, Chinese Research Academy of Environmental Sciences, 8 Dayangfang, Beijing 100012, China
| | - C Neal Stewart
- Department of Plant Sciences, University of Tennessee, 2431 Joe Johnson Drive, Knoxville, TN 37996-4561, USA
| | - Wei Wei
- State Key Laboratory of Vegetation and Environmental Change, Institute of Botany, Chinese Academy of Sciences, Beijing 100093, China
| | - Yujie Zhao
- State Key Laboratory of Environmental Criteria and Risk Assessment, Chinese Research Academy of Environmental Sciences, 8 Dayangfang, Beijing 100012, China
| | - Wei-Qing Wang
- Key Laboratory of Plant Resources and Beijing Botanical Garden, Institute of Botany, Chinese Academy of Sciences, Beijing 100093, China
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Hooftman DAP, Bullock JM, Morley K, Lamb C, Hodgson DJ, Bell P, Thomas J, Hails RS. Seed bank dynamics govern persistence of Brassica hybrids in crop and natural habitats. ANNALS OF BOTANY 2015; 115:147-157. [PMID: 25452253 PMCID: PMC4284111 DOI: 10.1093/aob/mcu213] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 07/14/2014] [Revised: 08/26/2014] [Accepted: 09/16/2014] [Indexed: 06/04/2023]
Abstract
BACKGROUND AND AIMS Gene flow from crops to their wild relatives has the potential to alter population growth rates and demography of hybrid populations, especially when a new crop has been genetically modified (GM). This study introduces a comprehensive approach to assess this potential for altered population fitness, and uses a combination of demographic data in two habitat types and mathematical (matrix) models that include crop rotations and outcrossing between parental species. METHODS Full life-cycle demographic rates, including seed bank survival, of non-GM Brassica rapa × B. napus F1 hybrids and their parent species were estimated from experiments in both agricultural and semi-natural habitats. Altered fitness potential was modelled using periodic matrices including crop rotations and outcrossing between parent species. KEY RESULTS The demographic vital rates (i.e. for major stage transitions) of the hybrid population were intermediate between or lower than both parental species. The population growth rate (λ) of hybrids indicated decreases in both habitat types, and in a semi-natural habitat hybrids became extinct at two sites. Elasticity analyses indicated that seed bank survival was the greatest contributor to λ. In agricultural habitats, hybrid populations were projected to decline, but with persistence times up to 20 years. The seed bank survival rate was the main driver determining persistence. It was found that λ of the hybrids was largely determined by parental seed bank survival and subsequent replenishment of the hybrid population through outcrossing of B. rapa with B. napus. CONCLUSIONS Hybrid persistence was found to be highly dependent on the seed bank, suggesting that targeting hybrid seed survival could be an important management option in controlling hybrid persistence. For local risk mitigation, an increased focus on the wild parent is suggested. Management actions, such as control of B. rapa, could indirectly reduce hybrid populations by blocking hybrid replenishment.
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Affiliation(s)
- Danny A P Hooftman
- Centre for Ecology and Hydrology, Benson Lane, Wallingford OX10 8BB, UK, School of Biosciences, University of Exeter, Cornwall Campus, Penryn TR10 9EZ, UK and National Institute of Agricultural Botany, Huntingdon Rd, Cambridge CB3 0EL, UK
| | - James M Bullock
- Centre for Ecology and Hydrology, Benson Lane, Wallingford OX10 8BB, UK, School of Biosciences, University of Exeter, Cornwall Campus, Penryn TR10 9EZ, UK and National Institute of Agricultural Botany, Huntingdon Rd, Cambridge CB3 0EL, UK
| | - Kathryn Morley
- Centre for Ecology and Hydrology, Benson Lane, Wallingford OX10 8BB, UK, School of Biosciences, University of Exeter, Cornwall Campus, Penryn TR10 9EZ, UK and National Institute of Agricultural Botany, Huntingdon Rd, Cambridge CB3 0EL, UK
| | - Caroline Lamb
- Centre for Ecology and Hydrology, Benson Lane, Wallingford OX10 8BB, UK, School of Biosciences, University of Exeter, Cornwall Campus, Penryn TR10 9EZ, UK and National Institute of Agricultural Botany, Huntingdon Rd, Cambridge CB3 0EL, UK
| | - David J Hodgson
- Centre for Ecology and Hydrology, Benson Lane, Wallingford OX10 8BB, UK, School of Biosciences, University of Exeter, Cornwall Campus, Penryn TR10 9EZ, UK and National Institute of Agricultural Botany, Huntingdon Rd, Cambridge CB3 0EL, UK
| | - Philippa Bell
- Centre for Ecology and Hydrology, Benson Lane, Wallingford OX10 8BB, UK, School of Biosciences, University of Exeter, Cornwall Campus, Penryn TR10 9EZ, UK and National Institute of Agricultural Botany, Huntingdon Rd, Cambridge CB3 0EL, UK
| | - Jane Thomas
- Centre for Ecology and Hydrology, Benson Lane, Wallingford OX10 8BB, UK, School of Biosciences, University of Exeter, Cornwall Campus, Penryn TR10 9EZ, UK and National Institute of Agricultural Botany, Huntingdon Rd, Cambridge CB3 0EL, UK
| | - Rosemary S Hails
- Centre for Ecology and Hydrology, Benson Lane, Wallingford OX10 8BB, UK, School of Biosciences, University of Exeter, Cornwall Campus, Penryn TR10 9EZ, UK and National Institute of Agricultural Botany, Huntingdon Rd, Cambridge CB3 0EL, UK
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Chu P, Liu H, Yang Q, Wang Y, Yan G, Guan R. An RNA-seq transcriptome analysis of floral buds of an interspecific Brassica hybrid between B. carinata and B. napus. PLANT REPRODUCTION 2014; 27:225-237. [PMID: 25398253 DOI: 10.1007/s00497-014-0253-z] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 08/27/2014] [Accepted: 11/03/2014] [Indexed: 06/04/2023]
Abstract
Interspecific hybridizations promote gene transfer between species and play an important role in plant speciation and crop improvement. However, hybrid sterility that commonly found in the first generation of hybrids hinders the utilization of interspecific hybridization. The combination of divergent parental genomes can create extensive transcriptome variations, and to determine these gene expression alterations and their effects on hybrids, an interspecific Brassica hybrid of B. carinata × B. napus was generated. Scanning electron microscopy analysis indicated that some of the hybrid pollen grains were irregular in shape and exhibited abnormal exine patterns compared with those from the parents. Using the Illumina HiSeq 2000 platform, 39,598, 32,403 and 42,208 genes were identified in flower buds of B. carinata cv. W29, B. napus cv. Zhongshuang 11 and their hybrids, respectively. The differentially expressed genes were significantly enriched in pollen wall assembly, pollen exine formation, pollen development, pollen tube growth, pollination, gene transcription, macromolecule methylation and translation, which might be associated with impaired fertility in the F1 hybrid. These results will shed light on the mechanisms underlying the low fertility of the interspecific hybrids and expand our knowledge of interspecific hybridization.
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Affiliation(s)
- Pu Chu
- State Key Laboratory of Crop Genetics and Germplasm Enhancement, Nanjing Agricultural University, Nanjing, Jiangsu, China
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Warschefsky E, Penmetsa RV, Cook DR, von Wettberg EJB. Back to the wilds: tapping evolutionary adaptations for resilient crops through systematic hybridization with crop wild relatives. AMERICAN JOURNAL OF BOTANY 2014; 101:1791-800. [PMID: 25326621 DOI: 10.3732/ajb.1400116] [Citation(s) in RCA: 112] [Impact Index Per Article: 11.2] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/02/2023]
Abstract
The genetic diversity of our crop plants has been substantially reduced during the process of domestication and breeding. This reduction in diversity necessarily constrains our ability to expand a crop's range of cultivation into environments that are more extreme than those in which it was domesticated, including into "sustainable" agricultural systems with reduced inputs of pesticides, water, and fertilizers. Conversely, the wild progenitors of crop plants typically possess high levels of genetic diversity, which underlie an expanded (relative to domesticates) range of adaptive traits that may be of agricultural relevance, including resistance to pests and pathogens, tolerance to abiotic extremes, and reduced dependence on inputs. Despite their clear potential for crop improvement, wild relatives have rarely been used systematically for crop improvement, and in no cases, have full sets of wild diversity been introgressed into a crop. Instead, most breeding efforts have focused on specific traits and dealt with wild species in a limited and typically ad hoc manner. Although expedient, this approach misses the opportunity to test a large suite of traits and deploy the full potential of crop wild relatives in breeding for the looming challenges of the 21st century. Here we review examples of hybridization in several species, both intentionally produced and naturally occurring, to illustrate the gains that are possible. We start with naturally occurring hybrids, and then examine a range of examples of hybridization in agricultural settings.
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Affiliation(s)
- Emily Warschefsky
- Department of Biological Sciences, Florida International University 12200 SW 8th Street, Miami, Florida 33199 USA Kushlan Center for Tropical Science, Fairchild Tropical Botanic Garden 10901 Old Cutler Road, Coral Gables, Florida 33156 USA
| | - R Varma Penmetsa
- Department of Plant Pathology, University of California-Davis, One Shields Avenue, Davis, California 95616 USA
| | - Douglas R Cook
- Department of Plant Pathology, University of California-Davis, One Shields Avenue, Davis, California 95616 USA
| | - Eric J B von Wettberg
- Department of Biological Sciences, Florida International University 12200 SW 8th Street, Miami, Florida 33199 USA Kushlan Center for Tropical Science, Fairchild Tropical Botanic Garden 10901 Old Cutler Road, Coral Gables, Florida 33156 USA
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Statement on a conceptual framework for the risk assessment of certain food additives re‐evaluated under Commission Regulation (EU) No 257/2010. EFSA J 2014. [DOI: 10.2903/j.efsa.2014.3697] [Citation(s) in RCA: 22] [Impact Index Per Article: 2.2] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/09/2023] Open
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Scientific Opinion on application (EFSA‐GMO‐BE‐2011‐101) for the placing on the market of herbicide‐tolerant genetically modified oilseed rape MON 88302 for food and feed uses, import and processing under Regulation (EC) No 1829/2003 from Monsanto. EFSA J 2014. [DOI: 10.2903/j.efsa.2014.3701] [Citation(s) in RCA: 6] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/09/2023] Open
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Liu Y, Wei W, Ma K, Li J, Liang Y, Darmency H. Consequences of gene flow between oilseed rape (Brassica napus) and its relatives. PLANT SCIENCE : AN INTERNATIONAL JOURNAL OF EXPERIMENTAL PLANT BIOLOGY 2013; 211:42-51. [PMID: 23987810 DOI: 10.1016/j.plantsci.2013.07.002] [Citation(s) in RCA: 22] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 11/09/2012] [Revised: 07/04/2013] [Accepted: 07/06/2013] [Indexed: 06/02/2023]
Abstract
Numerous studies have focused on the probability of occurrence of gene flow between transgenic crops and their wild relatives and the likelihood of transgene escape, which should be assessed before the commercial release of transgenic crops. This review paper focuses on this issue for oilseed rape, Brassica napus L., a species that produces huge numbers of pollen grains and seeds. We analyze separately the distinct steps of gene flow: (1) pollen and seeds as vectors of gene flow; (2) spontaneous hybridization; (3) hybrid behavior, fitness cost due to hybridization and mechanisms of introgression; (4) and fitness benefit due to transgenes (e.g. herbicide resistance and Bt toxin). Some physical, biological and molecular means of transgene containment are also described. Although hybrids and first generation progeny are difficult to identify in fields and non-crop habitats, the literature shows that transgenes could readily introgress into Brassica rapa, Brassica juncea and Brassica oleracea, while introgression is expected to be rare with Brassica nigra, Hirschfeldia incana and Raphanus raphanistrum. The hybrids grow well but produce less seed than their wild parent. The difference declines with increasing generations. However, there is large uncertainty about the evolution of chromosome numbers and recombination, and many parameters of life history traits of hybrids and progeny are not determined with satisfactory confidence to build generic models capable to really cover the wide diversity of situations. We show that more studies are needed to strengthen and organize biological knowledge, which is a necessary prerequisite for model simulations to assess the practical and evolutionary outputs of introgression, and to provide guidelines for gene flow management.
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Affiliation(s)
- Yongbo Liu
- State Key Laboratory of Environmental Criteria and Risk Assessment, Chinese Research Academy of Environmental Sciences, Beijing, China
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Oke KB, Westley PAH, Moreau DTR, Fleming IA. Hybridization between genetically modified Atlantic salmon and wild brown trout reveals novel ecological interactions. Proc Biol Sci 2013; 280:20131047. [PMID: 23720549 DOI: 10.1098/rspb.2013.1047] [Citation(s) in RCA: 20] [Impact Index Per Article: 1.8] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/12/2022] Open
Abstract
Interspecific hybridization is a route for transgenes from genetically modified (GM) animals to invade wild populations, yet the ecological effects and potential risks that may emerge from such hybridization are unknown. Through experimental crosses, we demonstrate transmission of a growth hormone transgene via hybridization between a candidate for commercial aquaculture production, GM Atlantic salmon (Salmo salar) and closely related wild brown trout (Salmo trutta). Transgenic hybrids were viable and grew more rapidly than transgenic salmon and other non-transgenic crosses in hatchery-like conditions. In stream mesocosms designed to more closely emulate natural conditions, transgenic hybrids appeared to express competitive dominance and suppressed the growth of transgenic and non-transgenic (wild-type) salmon by 82 and 54 per cent, respectively. To the best of our knowledge, this is the first demonstration of environmental impacts of hybridization between a GM animal and a closely related species. These results provide empirical evidence of the first steps towards introgression of foreign transgenes into the genomes of new species and contribute to the growing evidence that transgenic animals have complex and context-specific interactions with wild populations. We suggest that interspecific hybridization be explicitly considered when assessing the environmental consequences should transgenic animals escape to nature.
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Affiliation(s)
- Krista B Oke
- Department of Ocean Sciences, Ocean Sciences Centre, Memorial University of Newfoundland, St John's, Newfoundland and Labrador, Canada A1C 5S7.
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Scientific Opinion on a request from the European Commission related to the prolongation of prohibition of the placing on the market of genetically modified oilseed rape events Ms8, Rf3 and Ms8 × Rf3 for import, processing and feed uses in Austria. EFSA J 2013. [DOI: 10.2903/j.efsa.2013.3202] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.1] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/11/2022] Open
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Scientific Opinion on a request from the European Commission related to the prolongation of prohibition of the placing on the market of genetically modified oilseed rape event GT73 for import, processing and feed uses in Austria. EFSA J 2013. [DOI: 10.2903/j.efsa.2013.3201] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.1] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/11/2022] Open
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Scientific Opinion on a request from the European Commission related to the prolongation of prohibition of the placing on the market of genetically modified oilseed rape event GT73 for import, processing and feed uses in Austria. EFSA J 2012. [DOI: 10.2903/j.efsa.2012.2876] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/11/2022] Open
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Scientific Opinion on a request from the European Commission related to the prolongation of prohibition of the placing on the market of genetically modified oilseed rape events Ms8, Rf3 and Ms8 × Rf3 for import, processing and feed uses in Austria. EFSA J 2012. [DOI: 10.2903/j.efsa.2012.2878] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.1] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/11/2022] Open
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