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Piza DB, Corrigan BW, Gulli RA, Do Carmo S, Cuello AC, Muller L, Martinez-Trujillo J. Primacy of vision shapes behavioral strategies and neural substrates of spatial navigation in marmoset hippocampus. Nat Commun 2024; 15:4053. [PMID: 38744848 PMCID: PMC11093997 DOI: 10.1038/s41467-024-48374-2] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/22/2023] [Accepted: 04/29/2024] [Indexed: 05/16/2024] Open
Abstract
The role of the hippocampus in spatial navigation has been primarily studied in nocturnal mammals, such as rats, that lack many adaptations for daylight vision. Here we demonstrate that during 3D navigation, the common marmoset, a new world primate adapted to daylight, predominantly uses rapid head-gaze shifts for visual exploration while remaining stationary. During active locomotion marmosets stabilize the head, in contrast to rats that use low-velocity head movements to scan the environment as they locomote. Pyramidal neurons in the marmoset hippocampus CA3/CA1 regions predominantly show mixed selectivity for 3D spatial view, head direction, and place. Exclusive place selectivity is scarce. Inhibitory interneurons are predominantly mixed selective for angular head velocity and translation speed. Finally, we found theta phase resetting of local field potential oscillations triggered by head-gaze shifts. Our findings indicate that marmosets adapted to their daylight ecological niche by modifying exploration/navigation strategies and their corresponding hippocampal specializations.
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Affiliation(s)
- Diego B Piza
- Schulich School of Medicine and Dentistry, Western University, London, ON, Canada
- Robarts Research Institute, Western University, London, ON, Canada
| | - Benjamin W Corrigan
- Schulich School of Medicine and Dentistry, Western University, London, ON, Canada
- Robarts Research Institute, Western University, London, ON, Canada
- Department of Biology, Faculty of Science, York University, Toronto, ON, Canada
| | | | - Sonia Do Carmo
- Department of Pharmacology and Therapeutics, McGill University, Montreal, QC, Canada
| | - A Claudio Cuello
- Department of Pharmacology and Therapeutics, McGill University, Montreal, QC, Canada
| | - Lyle Muller
- Robarts Research Institute, Western University, London, ON, Canada
- Department of Applied Mathematics, Western University, London, ON, Canada
| | - Julio Martinez-Trujillo
- Schulich School of Medicine and Dentistry, Western University, London, ON, Canada.
- Robarts Research Institute, Western University, London, ON, Canada.
- Department of Physiology and Pharmacology, Western University, London, ON, Canada.
- Department of Psychiatry, Western University, London, ON, Canada.
- Department of Clinical Neurological Sciences, Western University, London, ON, Canada.
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2
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Saleem AB, Busse L. Interactions between rodent visual and spatial systems during navigation. Nat Rev Neurosci 2023:10.1038/s41583-023-00716-7. [PMID: 37380885 DOI: 10.1038/s41583-023-00716-7] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Accepted: 05/31/2023] [Indexed: 06/30/2023]
Abstract
Many behaviours that are critical for animals to survive and thrive rely on spatial navigation. Spatial navigation, in turn, relies on internal representations about one's spatial location, one's orientation or heading direction and the distance to objects in the environment. Although the importance of vision in guiding such internal representations has long been recognized, emerging evidence suggests that spatial signals can also modulate neural responses in the central visual pathway. Here, we review the bidirectional influences between visual and navigational signals in the rodent brain. Specifically, we discuss reciprocal interactions between vision and the internal representations of spatial position, explore the effects of vision on representations of an animal's heading direction and vice versa, and examine how the visual and navigational systems work together to assess the relative distances of objects and other features. Throughout, we consider how technological advances and novel ethological paradigms that probe rodent visuo-spatial behaviours allow us to advance our understanding of how brain areas of the central visual pathway and the spatial systems interact and enable complex behaviours.
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Affiliation(s)
- Aman B Saleem
- UCL Institute of Behavioural Neuroscience, Department of Experimental Psychology, University College London, London, UK.
| | - Laura Busse
- Division of Neuroscience, Faculty of Biology, LMU Munich, Munich, Germany.
- Bernstein Centre for Computational Neuroscience Munich, Munich, Germany.
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3
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Lee SM, Shin J, Lee I. Significance of visual scene-based learning in the hippocampal systems across mammalian species. Hippocampus 2022; 33:505-521. [PMID: 36458555 DOI: 10.1002/hipo.23483] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/05/2022] [Revised: 10/26/2022] [Accepted: 11/19/2022] [Indexed: 12/04/2022]
Abstract
The hippocampus and its associated cortical regions in the medial temporal lobe play essential roles when animals form a cognitive map and use it to achieve their goals. As the nature of map-making involves sampling different local views of the environment and putting them together in a spatially cohesive way, visual scenes are essential ingredients in the formative process of cognitive maps. Visual scenes also serve as important cues during information retrieval from the cognitive map. Research in humans has shown that there are regions in the brain that selectively process scenes and that the hippocampus is involved in scene-based memory tasks. The neurophysiological correlates of scene-based information processing in the hippocampus have been reported as "spatial view cells" in nonhuman primates. Like primates, it is widely accepted that rodents also use visual scenes in their background for spatial navigation and other kinds of problems. However, in rodents, it is not until recently that researchers examined the neural correlates of the hippocampus from the perspective of visual scene-based information processing. With the advent of virtual reality (VR) systems, it has been demonstrated that place cells in the hippocampus exhibit remarkably similar firing correlates in the VR environment compared with that of the real-world environment. Despite some limitations, the new trend of studying hippocampal functions in a visually controlled environment has the potential to allow investigation of the input-output relationships of network functions and experimental testing of traditional computational predictions more rigorously by providing well-defined visual stimuli. As scenes are essential for navigation and episodic memory in humans, further investigation of the rodents' hippocampal systems in scene-based tasks will provide a critical functional link across different mammalian species.
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Affiliation(s)
- Su-Min Lee
- Department of Brain and Cognitive Sciences, Seoul National University, Seoul, South Korea
| | - Jhoseph Shin
- Department of Brain and Cognitive Sciences, Seoul National University, Seoul, South Korea
| | - Inah Lee
- Department of Brain and Cognitive Sciences, Seoul National University, Seoul, South Korea
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4
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Thurley K. Naturalistic neuroscience and virtual reality. Front Syst Neurosci 2022; 16:896251. [PMID: 36467978 PMCID: PMC9712202 DOI: 10.3389/fnsys.2022.896251] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/14/2022] [Accepted: 10/31/2022] [Indexed: 04/04/2024] Open
Abstract
Virtual reality (VR) is one of the techniques that became particularly popular in neuroscience over the past few decades. VR experiments feature a closed-loop between sensory stimulation and behavior. Participants interact with the stimuli and not just passively perceive them. Several senses can be stimulated at once, large-scale environments can be simulated as well as social interactions. All of this makes VR experiences more natural than those in traditional lab paradigms. Compared to the situation in field research, a VR simulation is highly controllable and reproducible, as required of a laboratory technique used in the search for neural correlates of perception and behavior. VR is therefore considered a middle ground between ecological validity and experimental control. In this review, I explore the potential of VR in eliciting naturalistic perception and behavior in humans and non-human animals. In this context, I give an overview of recent virtual reality approaches used in neuroscientific research.
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Affiliation(s)
- Kay Thurley
- Faculty of Biology, Ludwig-Maximilians-Universität München, Munich, Germany
- Bernstein Center for Computational Neuroscience Munich, Munich, Germany
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5
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Nair IR, Bhasin G, Roy D. Hippocampus Maintains a Coherent Map Under Reward Feature-Landmark Cue Conflict. Front Neural Circuits 2022; 16:878046. [PMID: 35558552 PMCID: PMC9086833 DOI: 10.3389/fncir.2022.878046] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/17/2022] [Accepted: 03/25/2022] [Indexed: 11/24/2022] Open
Abstract
Animals predominantly use salient visual cues (landmarks) for efficient navigation. When the relative position of the visual cues is altered, the hippocampal population exhibits heterogeneous responses and constructs context-specific spatial maps. Another critical factor that can strongly modulate spatial representation is the presence of reward. Reward features can drive behavior and are known to bias spatial attention. However, it is unclear whether reward features are used for spatial reference in the presence of distal cues and how the hippocampus population dynamics changes when the association between reward features and distal cues is altered. We systematically investigated these questions by recording place cells from the CA1 in different sets of experiments while the rats ran in an environment with the conflicting association between reward features and distal cues. We report that, when rewards features were only used as local cues, the hippocampal place fields exhibited coherent and dynamical orientation across sessions, suggesting the use of a single coherent spatial map. We found that place cells maintained their spatial offset in the cue conflict conditions, thus showing a robust spatial coupling featuring an attractor-like property in the CA1. These results indicate that reward features may control the place field orientation but may not cause sufficient input difference to create context-specific spatial maps in the CA1.
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Affiliation(s)
| | - Guncha Bhasin
- National Brain Research Centre (NBRC), Gurgaon, India
| | - Dipanjan Roy
- Centre for Brain Science and Application (CBSA), School of Artificial Intelligence and Data Science (AIDE), Indian Institute of Technology (IIT) Jodhpur, Karwar, India
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6
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Purandare CS, Dhingra S, Rios R, Vuong C, To T, Hachisuka A, Choudhary K, Mehta MR. Moving bar of light evokes vectorial spatial selectivity in the immobile rat hippocampus. Nature 2022; 602:461-467. [PMID: 35140401 DOI: 10.1038/s41586-022-04404-x] [Citation(s) in RCA: 10] [Impact Index Per Article: 5.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/01/2020] [Accepted: 01/04/2022] [Indexed: 11/09/2022]
Abstract
Visual cortical neurons encode the position and motion direction of specific stimuli retrospectively, without any locomotion or task demand1. The hippocampus, which is a part of the visual system, is hypothesized to require self-motion or a cognitive task to generate allocentric spatial selectivity that is scalar, abstract2,3 and prospective4-7. Here we measured rodent hippocampal selectivity to a moving bar of light in a body-fixed rat to bridge these seeming disparities. About 70% of dorsal CA1 neurons showed stable activity modulation as a function of the angular position of the bar, independent of behaviour and rewards. One-third of tuned cells also encoded the direction of revolution. In other experiments, neurons encoded the distance of the bar, with preference for approaching motion. Collectively, these demonstrate visually evoked vectorial selectivity (VEVS). Unlike place cells, VEVS was retrospective. Changes in the visual stimulus or its predictability did not cause remapping but only caused gradual changes. Most VEVS-tuned neurons behaved like place cells during spatial exploration and the two selectivities were correlated. Thus, VEVS could form the basic building block of hippocampal activity. When combined with self-motion, reward or multisensory stimuli8, it can generate the complexity of prospective representations including allocentric space9, time10,11 and episodes12.
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Affiliation(s)
- Chinmay S Purandare
- W.M. Keck Center for Neurophysics, Department of Physics and Astronomy, UCLA, Los Angeles, CA, USA.,Department of Bioengineering, UCLA, Los Angeles, CA, USA
| | - Shonali Dhingra
- W.M. Keck Center for Neurophysics, Department of Physics and Astronomy, UCLA, Los Angeles, CA, USA
| | - Rodrigo Rios
- W.M. Keck Center for Neurophysics, Department of Physics and Astronomy, UCLA, Los Angeles, CA, USA
| | - Cliff Vuong
- W.M. Keck Center for Neurophysics, Department of Physics and Astronomy, UCLA, Los Angeles, CA, USA
| | - Thuc To
- W.M. Keck Center for Neurophysics, Department of Physics and Astronomy, UCLA, Los Angeles, CA, USA
| | - Ayaka Hachisuka
- W.M. Keck Center for Neurophysics, Department of Physics and Astronomy, UCLA, Los Angeles, CA, USA
| | - Krishna Choudhary
- W.M. Keck Center for Neurophysics, Department of Physics and Astronomy, UCLA, Los Angeles, CA, USA
| | - Mayank R Mehta
- W.M. Keck Center for Neurophysics, Department of Physics and Astronomy, UCLA, Los Angeles, CA, USA. .,Department of Neurology, UCLA, Los Angeles, CA, USA. .,Department of Electrical and Computer Engineering, UCLA, Los Angeles, CA, USA.
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7
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Linking hippocampal multiplexed tuning, Hebbian plasticity and navigation. Nature 2021; 599:442-448. [PMID: 34671157 DOI: 10.1038/s41586-021-03989-z] [Citation(s) in RCA: 18] [Impact Index Per Article: 6.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/14/2019] [Accepted: 09/01/2021] [Indexed: 11/08/2022]
Abstract
Three major pillars of hippocampal function are spatial navigation1, Hebbian synaptic plasticity2 and spatial selectivity3. The hippocampus is also implicated in episodic memory4, but the precise link between these four functions is missing. Here we report the multiplexed selectivity of dorsal CA1 neurons while rats performed a virtual navigation task using only distal visual cues5, similar to the standard water maze test of spatial memory1. Neural responses primarily encoded path distance from the start point and the head angle of rats, with a weak allocentric spatial component similar to that in primates but substantially weaker than in rodents in the real world. Often, the same cells multiplexed and encoded path distance, angle and allocentric position in a sequence, thus encoding a journey-specific episode. The strength of neural activity and tuning strongly correlated with performance, with a temporal relationship indicating neural responses influencing behaviour and vice versa. Consistent with computational models of associative and causal Hebbian learning6,7, neural responses showed increasing clustering8 and became better predictors of behaviourally relevant variables, with the average neurometric curves exceeding and converging to psychometric curves. Thus, hippocampal neurons multiplex and exhibit highly plastic, task- and experience-dependent tuning to path-centric and allocentric variables to form episodic sequences supporting navigation.
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8
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Safaryan K, Mehta MR. Enhanced hippocampal theta rhythmicity and emergence of eta oscillation in virtual reality. Nat Neurosci 2021; 24:1065-1070. [PMID: 34183867 DOI: 10.1038/s41593-021-00871-z] [Citation(s) in RCA: 11] [Impact Index Per Article: 3.7] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/18/2020] [Accepted: 05/07/2021] [Indexed: 02/05/2023]
Abstract
Hippocampal theta rhythm is a therapeutic target because of its vital role in neuroplasticity, learning and memory. Curiously, theta differs across species. Here we show that theta rhythmicity is greatly amplified when rats run in virtual reality. A novel eta rhythm emerged in the CA1 cell layer, primarily in interneurons. Thus, multisensory experience governs hippocampal rhythms. Virtual reality can be used to boost or control brain rhythms and to alter neural dynamics, wiring and plasticity.
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Affiliation(s)
- Karen Safaryan
- Department of Physics and Astronomy, University of California, Los Angeles, Los Angeles, CA, USA.
| | - Mayank R Mehta
- Department of Physics and Astronomy, University of California, Los Angeles, Los Angeles, CA, USA. .,W. M. Keck Center for Neurophysics, Integrative Center for Learning and Memory, and Brain Research Institute, University of California, Los Angeles, Los Angeles, CA, USA. .,Department of Electrical and Computer Engineering, University of California, Los Angeles, Los Angeles, CA, USA. .,Departments of Neurology and Neurobiology, University of California, Los Angeles, Los Angeles, CA, USA.
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9
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Go MA, Rogers J, Gava GP, Davey CE, Prado S, Liu Y, Schultz SR. Place Cells in Head-Fixed Mice Navigating a Floating Real-World Environment. Front Cell Neurosci 2021; 15:618658. [PMID: 33642996 PMCID: PMC7906988 DOI: 10.3389/fncel.2021.618658] [Citation(s) in RCA: 11] [Impact Index Per Article: 3.7] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/17/2020] [Accepted: 01/25/2020] [Indexed: 12/27/2022] Open
Abstract
The hippocampal place cell system in rodents has provided a major paradigm for the scientific investigation of memory function and dysfunction. Place cells have been observed in area CA1 of the hippocampus of both freely moving animals, and of head-fixed animals navigating in virtual reality environments. However, spatial coding in virtual reality preparations has been observed to be impaired. Here we show that the use of a real-world environment system for head-fixed mice, consisting of an air-floating track with proximal cues, provides some advantages over virtual reality systems for the study of spatial memory. We imaged the hippocampus of head-fixed mice injected with the genetically encoded calcium indicator GCaMP6s while they navigated circularly constrained or open environments on the floating platform. We observed consistent place tuning in a substantial fraction of cells despite the absence of distal visual cues. Place fields remapped when animals entered a different environment. When animals re-entered the same environment, place fields typically remapped over a time period of multiple days, faster than in freely moving preparations, but comparable with virtual reality. Spatial information rates were within the range observed in freely moving mice. Manifold analysis indicated that spatial information could be extracted from a low-dimensional subspace of the neural population dynamics. This is the first demonstration of place cells in head-fixed mice navigating on an air-lifted real-world platform, validating its use for the study of brain circuits involved in memory and affected by neurodegenerative disorders.
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Affiliation(s)
- Mary Ann Go
- Department of Bioengineering and Centre for Neurotechnology, Imperial College London, London, United Kingdom
| | - Jake Rogers
- Department of Bioengineering and Centre for Neurotechnology, Imperial College London, London, United Kingdom
| | - Giuseppe P. Gava
- Department of Bioengineering and Centre for Neurotechnology, Imperial College London, London, United Kingdom
| | - Catherine E. Davey
- Department of Bioengineering and Centre for Neurotechnology, Imperial College London, London, United Kingdom
- Department of Biomedical Engineering, University of Melbourne, Melbourne, VIC, Australia
| | - Seigfred Prado
- Department of Bioengineering and Centre for Neurotechnology, Imperial College London, London, United Kingdom
| | - Yu Liu
- Department of Bioengineering and Centre for Neurotechnology, Imperial College London, London, United Kingdom
| | - Simon R. Schultz
- Department of Bioengineering and Centre for Neurotechnology, Imperial College London, London, United Kingdom
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10
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Lee SM, Jin SW, Park SB, Park EH, Lee CH, Lee HW, Lim HY, Yoo SW, Ahn JR, Shin J, Lee SA, Lee I. Goal-directed interaction of stimulus and task demand in the parahippocampal region. Hippocampus 2021; 31:717-736. [PMID: 33394547 PMCID: PMC8359334 DOI: 10.1002/hipo.23295] [Citation(s) in RCA: 12] [Impact Index Per Article: 4.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/17/2020] [Revised: 12/05/2020] [Accepted: 12/12/2020] [Indexed: 11/10/2022]
Abstract
The hippocampus and parahippocampal region are essential for representing episodic memories involving various spatial locations and objects, and for using those memories for future adaptive behavior. The “dual‐stream model” was initially formulated based on anatomical characteristics of the medial temporal lobe, dividing the parahippocampal region into two streams that separately process and relay spatial and nonspatial information to the hippocampus. Despite its significance, the dual‐stream model in its original form cannot explain recent experimental results, and many researchers have recognized the need for a modification of the model. Here, we argue that dividing the parahippocampal region into spatial and nonspatial streams a priori may be too simplistic, particularly in light of ambiguous situations in which a sensory cue alone (e.g., visual scene) may not allow such a definitive categorization. Upon reviewing evidence, including our own, that reveals the importance of goal‐directed behavioral responses in determining the relative involvement of the parahippocampal processing streams, we propose the Goal‐directed Interaction of Stimulus and Task‐demand (GIST) model. In the GIST model, input stimuli such as visual scenes and objects are first processed by both the postrhinal and perirhinal cortices—the postrhinal cortex more heavily involved with visual scenes and perirhinal cortex with objects—with relatively little dependence on behavioral task demand. However, once perceptual ambiguities are resolved and the scenes and objects are identified and recognized, the information is then processed through the medial or lateral entorhinal cortex, depending on whether it is used to fulfill navigational or non‐navigational goals, respectively. As complex sensory stimuli are utilized for both navigational and non‐navigational purposes in an intermixed fashion in naturalistic settings, the hippocampus may be required to then put together these experiences into a coherent map to allow flexible cognitive operations for adaptive behavior to occur.
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Affiliation(s)
- Su-Min Lee
- Department of Brain and Cognitive Sciences, Seoul National University, Seoul, South Korea
| | - Seung-Woo Jin
- Department of Brain and Cognitive Sciences, Seoul National University, Seoul, South Korea
| | - Seong-Beom Park
- Department of Brain and Cognitive Sciences, Seoul National University, Seoul, South Korea
| | - Eun-Hye Park
- Department of Brain and Cognitive Sciences, Seoul National University, Seoul, South Korea
| | - Choong-Hee Lee
- Department of Brain and Cognitive Sciences, Seoul National University, Seoul, South Korea
| | - Hyun-Woo Lee
- Department of Brain and Cognitive Sciences, Seoul National University, Seoul, South Korea
| | - Heung-Yeol Lim
- Department of Brain and Cognitive Sciences, Seoul National University, Seoul, South Korea
| | - Seung-Woo Yoo
- Department of Biomedical Science, Charles E. Schmidt College of Medicine, Brain Institute, Florida Atlantic University, Jupiter, Florida, USA
| | - Jae Rong Ahn
- Department of Biology, Tufts University, Medford, Massachusetts, USA
| | - Jhoseph Shin
- Department of Brain and Cognitive Sciences, Seoul National University, Seoul, South Korea
| | - Sang Ah Lee
- Department of Bio and Brain Engineering, Korea Advanced Institute of Science and Technology, Daejeon, South Korea
| | - Inah Lee
- Department of Brain and Cognitive Sciences, Seoul National University, Seoul, South Korea
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11
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Saleem AB. Two stream hypothesis of visual processing for navigation in mouse. Curr Opin Neurobiol 2020; 64:70-78. [PMID: 32294570 DOI: 10.1016/j.conb.2020.03.009] [Citation(s) in RCA: 28] [Impact Index Per Article: 7.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/27/2019] [Revised: 03/17/2020] [Accepted: 03/20/2020] [Indexed: 12/11/2022]
Abstract
Vision research has traditionally been studied in stationary subjects observing stimuli, and rarely during navigation. Recent research using virtual reality environments for mice has revealed that responses even in the primary visual cortex are modulated by spatial context - identical scenes presented in different positions of a room can elicit different responses. Here, we review these results and discuss how information from visual areas can reach navigational areas of the brain. Based on the observation that mouse higher visual areas cover different parts of the visual field, we propose that spatial signals are processed along two-streams based on visual field coverage. Specifically, this hypothesis suggests that landmark related signals are processed by areas biased to the central field, and self-motion related signals are processed by areas biased to the peripheral field.
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Affiliation(s)
- Aman B Saleem
- UCL Institute of Behavioural Neurosciences, Department of Experimental Psychology, University College London, London, WC1H 0AP, UK.
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12
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Amaral-Júnior PA, Mourão FAG, Amancio MCL, Pinto HPP, Carvalho VR, Guarnieri LDO, Magalhães HA, Moraes MFD. A Custom Microcontrolled and Wireless-Operated Chamber for Auditory Fear Conditioning. Front Neurosci 2019; 13:1193. [PMID: 31787872 PMCID: PMC6853868 DOI: 10.3389/fnins.2019.01193] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/21/2019] [Accepted: 10/21/2019] [Indexed: 12/27/2022] Open
Abstract
Animal behavioral paradigms, such as classical conditioning and operant conditioning, are an important tool to study the neural basis of cognition and behavior. These paradigms involve manipulating sensory stimuli in a way that learning processes are induced under controlled experimental conditions. However, the majority of the commercially available equipment did not offer flexibility to manipulate stimuli. Therefore, the development of most versatile devices would allow the study of more complex cognitive functions. The purpose of this work is to present a low-cost, customized and wireless-operated chamber for animal behavior conditioning, based on the joint operation of two microcontroller modules: Arduino Due and ESP8266-12E. Our results showed that the auditory stimulation system allows setting the carrier frequency in the range of 1 Hz up to more than 100 kHz and the sound stimulus can be modulated in amplitude, also over a wide range of frequencies. Likewise, foot-shock could be precisely manipulated regarding its amplitude (from ∼200 μA to ∼1500 μA) and frequency (up to 20 pulses per second). Finally, adult rats exposed to a protocol of cued fear conditioning in our device showed consistent behavioral response and electrophysiological evoked responses in the midbrain auditory pathway. Furthermore, the device developed in the current study represents an open source alternative to develop customized protocols to study fear memory under conditions of varied sensory stimuli.
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Affiliation(s)
- Paulo Aparecido Amaral-Júnior
- Programa de Pós Graduação em Engenharia Elétrica, Departamento de Engenharia Eletrônica (DELT), Escola de Engenharia, Universidade Federal de Minas Gerais, Belo Horizonte, Brazil
| | - Flávio Afonso Gonçalves Mourão
- Programa de Pós Graduação em Neurociências, Núcleo de Neurociências, Departamento de Fisiologia e Biofísica, Instituto de Ciências Biológicas, Universidade Federal de Minas Gerais, Belo Horizonte, Brazil
| | - Mariana Chamon Ladeira Amancio
- Programa de Pós Graduação em Engenharia Elétrica, Departamento de Engenharia Eletrônica (DELT), Escola de Engenharia, Universidade Federal de Minas Gerais, Belo Horizonte, Brazil
| | - Hyorrana Priscila Pereira Pinto
- Programa de Pós Graduação em Neurociências, Núcleo de Neurociências, Departamento de Fisiologia e Biofísica, Instituto de Ciências Biológicas, Universidade Federal de Minas Gerais, Belo Horizonte, Brazil
| | - Vinícius Rezende Carvalho
- Programa de Pós Graduação em Engenharia Elétrica, Departamento de Engenharia Eletrônica (DELT), Escola de Engenharia, Universidade Federal de Minas Gerais, Belo Horizonte, Brazil
- Programa de Pós Graduação em Neurociências, Núcleo de Neurociências, Departamento de Fisiologia e Biofísica, Instituto de Ciências Biológicas, Universidade Federal de Minas Gerais, Belo Horizonte, Brazil
| | - Leonardo de Oliveira Guarnieri
- Programa de Pós Graduação em Engenharia Elétrica, Departamento de Engenharia Eletrônica (DELT), Escola de Engenharia, Universidade Federal de Minas Gerais, Belo Horizonte, Brazil
- Programa de Pós Graduação em Neurociências, Núcleo de Neurociências, Departamento de Fisiologia e Biofísica, Instituto de Ciências Biológicas, Universidade Federal de Minas Gerais, Belo Horizonte, Brazil
| | - Hermes Aguiar Magalhães
- Programa de Pós Graduação em Engenharia Elétrica, Departamento de Engenharia Eletrônica (DELT), Escola de Engenharia, Universidade Federal de Minas Gerais, Belo Horizonte, Brazil
| | - Márcio Flávio Dutra Moraes
- Programa de Pós Graduação em Neurociências, Núcleo de Neurociências, Departamento de Fisiologia e Biofísica, Instituto de Ciências Biológicas, Universidade Federal de Minas Gerais, Belo Horizonte, Brazil
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13
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Rolls ET, Wirth S. Spatial representations in the primate hippocampus, and their functions in memory and navigation. Prog Neurobiol 2018; 171:90-113. [DOI: 10.1016/j.pneurobio.2018.09.004] [Citation(s) in RCA: 59] [Impact Index Per Article: 9.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/11/2018] [Revised: 09/10/2018] [Accepted: 09/10/2018] [Indexed: 01/01/2023]
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14
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Saleem AB, Diamanti EM, Fournier J, Harris KD, Carandini M. Coherent encoding of subjective spatial position in visual cortex and hippocampus. Nature 2018; 562:124-127. [PMID: 30202092 PMCID: PMC6309439 DOI: 10.1038/s41586-018-0516-1] [Citation(s) in RCA: 117] [Impact Index Per Article: 19.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/15/2017] [Accepted: 07/24/2018] [Indexed: 01/30/2023]
Abstract
A major role of vision is to guide navigation, and navigation is strongly driven by vision1-4. Indeed, the brain's visual and navigational systems are known to interact5,6, and signals related to position in the environment have been suggested to appear as early as in the visual cortex6,7. Here, to establish the nature of these signals, we recorded in the primary visual cortex (V1) and hippocampal area CA1 while mice traversed a corridor in virtual reality. The corridor contained identical visual landmarks in two positions, so that a purely visual neuron would respond similarly at those positions. Most V1 neurons, however, responded solely or more strongly to the landmarks in one position rather than the other. This modulation of visual responses by spatial location was not explained by factors such as running speed. To assess whether the modulation is related to navigational signals and to the animal's subjective estimate of position, we trained the mice to lick for a water reward upon reaching a reward zone in the corridor. Neuronal populations in both CA1 and V1 encoded the animal's position along the corridor, and the errors in their representations were correlated. Moreover, both representations reflected the animal's subjective estimate of position, inferred from the animal's licks, better than its actual position. When animals licked in a given location-whether correctly or incorrectly-neural populations in both V1 and CA1 placed the animal in the reward zone. We conclude that visual responses in V1 are controlled by navigational signals, which are coherent with those encoded in hippocampus and reflect the animal's subjective position. The presence of such navigational signals as early as a primary sensory area suggests that they permeate sensory processing in the cortex.
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Affiliation(s)
- Aman B Saleem
- UCL Institute of Ophthalmology, University College London, London, UK. .,Department of Experimental Psychology, University College London, London, UK.
| | - E Mika Diamanti
- UCL Institute of Ophthalmology, University College London, London, UK.,CoMPLEX, Department of Computer Science, University College London, London, UK
| | - Julien Fournier
- UCL Institute of Ophthalmology, University College London, London, UK
| | - Kenneth D Harris
- UCL Institute of Neurology, University College London, London, UK
| | - Matteo Carandini
- UCL Institute of Ophthalmology, University College London, London, UK
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15
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Chen G, King JA, Lu Y, Cacucci F, Burgess N. Spatial cell firing during virtual navigation of open arenas by head-restrained mice. eLife 2018; 7:34789. [PMID: 29911974 PMCID: PMC6029848 DOI: 10.7554/elife.34789] [Citation(s) in RCA: 31] [Impact Index Per Article: 5.2] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/03/2018] [Accepted: 06/11/2018] [Indexed: 12/17/2022] Open
Abstract
We present a mouse virtual reality (VR) system which restrains head-movements to horizontal rotations, compatible with multi-photon imaging. This system allows expression of the spatial navigation and neuronal firing patterns characteristic of real open arenas (R). Comparing VR to R: place and grid, but not head-direction, cell firing had broader spatial tuning; place, but not grid, cell firing was more directional; theta frequency increased less with running speed, whereas increases in firing rates with running speed and place and grid cells' theta phase precession were similar. These results suggest that the omni-directional place cell firing in R may require local-cues unavailable in VR, and that the scale of grid and place cell firing patterns, and theta frequency, reflect translational motion inferred from both virtual (visual and proprioceptive) and real (vestibular translation and extra-maze) cues. By contrast, firing rates and theta phase precession appear to reflect visual and proprioceptive cues alone.
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Affiliation(s)
- Guifen Chen
- UCL Institute of Cognitive Neuroscience, University College London, London, United Kingdom.,Department of Neuroscience Physiology and Pharmacology, University College London, London, United Kingdom
| | - John Andrew King
- Department of Clinical Educational Health Psychology, University College London, London, United Kingdom
| | - Yi Lu
- UCL Institute of Cognitive Neuroscience, University College London, London, United Kingdom.,Department of Neuroscience Physiology and Pharmacology, University College London, London, United Kingdom
| | - Francesca Cacucci
- Department of Neuroscience Physiology and Pharmacology, University College London, London, United Kingdom
| | - Neil Burgess
- UCL Institute of Cognitive Neuroscience, University College London, London, United Kingdom.,UCL Institute of Neurology, University College London, London, United Kingdom
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16
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Arbab T, Pennartz CMA, Battaglia FP. Impaired hippocampal representation of place in the Fmr1-knockout mouse model of fragile X syndrome. Sci Rep 2018; 8:8889. [PMID: 29892074 PMCID: PMC5995880 DOI: 10.1038/s41598-018-26853-z] [Citation(s) in RCA: 13] [Impact Index Per Article: 2.2] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/30/2017] [Accepted: 04/19/2018] [Indexed: 12/26/2022] Open
Abstract
Fragile X syndrome (FXS) is an X-chromosome linked intellectual disability and the most common known inherited single gene cause of autism spectrum disorder (ASD). Building upon demonstrated deficits in neuronal plasticity and spatial memory in FXS, we investigated how spatial information processing is affected in vivo in an FXS mouse model (Fmr1-KO). Healthy hippocampal neurons (so-called place cells) exhibit place-related activity during spatial exploration, and their firing fields tend to remain stable over time. In contrast, we find impaired stability and reduced specificity of Fmr1-KO spatial representations. This is a potential biomarker for the cognitive dysfunction observed in FXS, informative on the ability to integrate sensory information into an abstract representation and successfully retain this conceptual memory. Our results provide key insight into the biological mechanisms underlying cognitive disabilities in FXS and ASD, paving the way for a targeted approach to remedy these.
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Affiliation(s)
- Tara Arbab
- Cognitive and Systems Neuroscience, Swammerdam Institute, Center for Neuroscience, Faculty of Science, University of Amsterdam, Science Park 904, 1098 XH, Amsterdam, The Netherlands. .,Netherlands Institute for Neuroscience, Institute of the Royal Netherlands Academy of Arts and Sciences, Meibergdreef 47, 1105 BA, Amsterdam, The Netherlands. .,Department of Psychiatry, Academic Medical Center, University of Amsterdam, Postal Box 22660, 1100 DD, Amsterdam, The Netherlands.
| | - Cyriel M A Pennartz
- Cognitive and Systems Neuroscience, Swammerdam Institute, Center for Neuroscience, Faculty of Science, University of Amsterdam, Science Park 904, 1098 XH, Amsterdam, The Netherlands.,Research Priority Program Brain and Cognition, University of Amsterdam, Postal Box 94216, 1090 GE, Amsterdam, The Netherlands
| | - Francesco P Battaglia
- Cognitive and Systems Neuroscience, Swammerdam Institute, Center for Neuroscience, Faculty of Science, University of Amsterdam, Science Park 904, 1098 XH, Amsterdam, The Netherlands.,Donders Institute for Brain, Cognition, and Behaviour, Radboud Universiteit Nijmegen, Heyendaalseweg 135, 6525 AJ, Nijmegen, The Netherlands
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17
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Aitken P, Zheng Y, Smith PF. The modulation of hippocampal theta rhythm by the vestibular system. J Neurophysiol 2018; 119:548-562. [DOI: 10.1152/jn.00548.2017] [Citation(s) in RCA: 20] [Impact Index Per Article: 3.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/17/2022] Open
Abstract
The vestibular system is a sensory system that has evolved over millions of years to detect acceleration of the head, both rotational and translational, in three dimensions. One of its most important functions is to stabilize gaze during unexpected head movement; however, it is also important in the control of posture and autonomic reflexes. Theta rhythm is a 3- to 12-Hz oscillating EEG signal that is intimately linked to self-motion and is also known to be important in learning and memory. Many studies over the last two decades have shown that selective activation of the vestibular system, using either natural rotational or translational stimulation, or electrical stimulation of the peripheral vestibular system, can induce and modulate theta activity. Furthermore, inactivation of the vestibular system has been shown to significantly reduce theta in freely moving animals, which may be linked to its impairment of place cell function as well as spatial learning and memory. The pathways through which vestibular information modulate theta rhythm remain debatable. However, vestibular responses have been found in the pedunculopontine tegmental nucleus (PPTg) and activation of the vestibular system causes an increase in acetylcholine release into the hippocampus, probably from the medial septum. Therefore, a pathway from the vestibular nucleus complex and/or cerebellum to the PPTg, supramammillary nucleus, posterior hypothalamic nucleus, and septum to the hippocampus is likely. The modulation of theta by the vestibular system may have implications for vestibular effects on cognitive function and the contribution of vestibular impairment to the risk of dementia.
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Affiliation(s)
- Phillip Aitken
- Department of Pharmacology and Toxicology, School of Biomedical Sciences, and Brain Health Research Centre, University of Otago, Dunedin, New Zealand
| | - Yiwen Zheng
- Department of Pharmacology and Toxicology, School of Biomedical Sciences, and Brain Health Research Centre, University of Otago, Dunedin, New Zealand
- Brain Research New Zealand Centre of Research Excellence
- Eisdell Moore Centre for Hearing and Balance Research, University of Auckland, Auckland, New Zealand
| | - Paul F. Smith
- Department of Pharmacology and Toxicology, School of Biomedical Sciences, and Brain Health Research Centre, University of Otago, Dunedin, New Zealand
- Brain Research New Zealand Centre of Research Excellence
- Eisdell Moore Centre for Hearing and Balance Research, University of Auckland, Auckland, New Zealand
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18
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Stowers JR, Hofbauer M, Bastien R, Griessner J, Higgins P, Farooqui S, Fischer RM, Nowikovsky K, Haubensak W, Couzin ID, Tessmar-Raible K, Straw AD. Virtual reality for freely moving animals. Nat Methods 2017; 14:995-1002. [PMID: 28825703 PMCID: PMC6485657 DOI: 10.1038/nmeth.4399] [Citation(s) in RCA: 132] [Impact Index Per Article: 18.9] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/08/2016] [Accepted: 07/06/2017] [Indexed: 12/29/2022]
Abstract
Standard animal behavior paradigms incompletely mimic nature and thus limit our understanding of behavior and brain function. Virtual reality (VR) can help, but it poses challenges. Typical VR systems require movement restrictions but disrupt sensorimotor experience, causing neuronal and behavioral alterations. We report the development of FreemoVR, a VR system for freely moving animals. We validate immersive VR for mice, flies, and zebrafish. FreemoVR allows instant, disruption-free environmental reconfigurations and interactions between real organisms and computer-controlled agents. Using the FreemoVR platform, we established a height-aversion assay in mice and studied visuomotor effects in Drosophila and zebrafish. Furthermore, by photorealistically mimicking zebrafish we discovered that effective social influence depends on a prospective leader balancing its internally preferred directional choice with social interaction. FreemoVR technology facilitates detailed investigations into neural function and behavior through the precise manipulation of sensorimotor feedback loops in unrestrained animals.
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Affiliation(s)
- John R. Stowers
- Research Institute of Molecular Pathology, Vienna Biocenter, Vienna, Austria
- loopbio gmbh, Kritzendorf, Austria
| | - Maximilian Hofbauer
- Research Institute of Molecular Pathology, Vienna Biocenter, Vienna, Austria
- loopbio gmbh, Kritzendorf, Austria
- Max F. Perutz Laboratories, University of Vienna, Vienna, Austria
- Research Platform “Rhythms of Life”, University of Vienna, Vienna, Austria
| | - Renaud Bastien
- Department of Collective Behaviour, Max Planck Institute for Ornithology, 78457 Konstanz, Germany
- Chair of Biodiversity and Collective Behaviour, Department of Biology, University of Konstanz 78457, Konstanz, Germany
| | - Johannes Griessner
- Research Institute of Molecular Pathology, Vienna Biocenter, Vienna, Austria
| | - Peter Higgins
- Research Institute of Molecular Pathology, Vienna Biocenter, Vienna, Austria
| | - Sarfarazhussain Farooqui
- Max F. Perutz Laboratories, University of Vienna, Vienna, Austria
- Research Platform “Rhythms of Life”, University of Vienna, Vienna, Austria
- Medizinische Universität Wien, Dept. for Internal Medicine I, 1090 Wien, Austria
| | - Ruth M. Fischer
- Max F. Perutz Laboratories, University of Vienna, Vienna, Austria
| | - Karin Nowikovsky
- Medizinische Universität Wien, Dept. for Internal Medicine I, 1090 Wien, Austria
| | - Wulf Haubensak
- Research Institute of Molecular Pathology, Vienna Biocenter, Vienna, Austria
| | - Iain D. Couzin
- Department of Collective Behaviour, Max Planck Institute for Ornithology, 78457 Konstanz, Germany
- Chair of Biodiversity and Collective Behaviour, Department of Biology, University of Konstanz 78457, Konstanz, Germany
| | - Kristin Tessmar-Raible
- Max F. Perutz Laboratories, University of Vienna, Vienna, Austria
- Research Platform “Rhythms of Life”, University of Vienna, Vienna, Austria
| | - Andrew D. Straw
- Research Institute of Molecular Pathology, Vienna Biocenter, Vienna, Austria
- Institute of Biology I and Bernstein Center Freiburg, Faculty of Biology, Albert-Ludwigs-University Freiburg, Freiburg, Germany
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19
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Hippocampus-Dependent Goal Localization by Head-Fixed Mice in Virtual Reality. eNeuro 2017; 4:eN-NWR-0369-16. [PMID: 28484738 PMCID: PMC5413318 DOI: 10.1523/eneuro.0369-16.2017] [Citation(s) in RCA: 31] [Impact Index Per Article: 4.4] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/12/2016] [Revised: 04/17/2017] [Accepted: 04/18/2017] [Indexed: 11/21/2022] Open
Abstract
The demonstration of the ability of rodents to navigate in virtual reality (VR) has made it an important behavioral paradigm for studying spatially modulated neuronal activity in these animals. However, their behavior in such simulated environments remains poorly understood. Here, we show that encoding and retrieval of goal location memory in mice head-fixed in VR depends on the postsynaptic scaffolding protein Shank2 and the dorsal hippocampus. In our newly developed virtual cued goal location task, a head-fixed mouse moves from one end of a virtual linear track to seek rewards given at a target location along the track. The mouse needs to visually recognize the target location and stay there for a short period of time to receive the reward. Transient pharmacological blockade of fast glutamatergic synaptic transmission in the dorsal hippocampus dramatically and reversibly impaired performance of this task. Encoding and updating of virtual cued goal location memory was impaired in mice deficient in the postsynaptic scaffolding protein Shank2, a mouse model of autism that exhibits impaired spatial learning in a real environment. These results highlight the crucial roles of the dorsal hippocampus and postsynaptic protein complexes in spatial learning and navigation in VR.
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20
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Tafazoli S, Safaai H, De Franceschi G, Rosselli FB, Vanzella W, Riggi M, Buffolo F, Panzeri S, Zoccolan D. Emergence of transformation-tolerant representations of visual objects in rat lateral extrastriate cortex. eLife 2017; 6. [PMID: 28395730 PMCID: PMC5388540 DOI: 10.7554/elife.22794] [Citation(s) in RCA: 31] [Impact Index Per Article: 4.4] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/29/2016] [Accepted: 02/26/2017] [Indexed: 01/17/2023] Open
Abstract
Rodents are emerging as increasingly popular models of visual functions. Yet, evidence that rodent visual cortex is capable of advanced visual processing, such as object recognition, is limited. Here we investigate how neurons located along the progression of extrastriate areas that, in the rat brain, run laterally to primary visual cortex, encode object information. We found a progressive functional specialization of neural responses along these areas, with: (1) a sharp reduction of the amount of low-level, energy-related visual information encoded by neuronal firing; and (2) a substantial increase in the ability of both single neurons and neuronal populations to support discrimination of visual objects under identity-preserving transformations (e.g., position and size changes). These findings strongly argue for the existence of a rat object-processing pathway, and point to the rodents as promising models to dissect the neuronal circuitry underlying transformation-tolerant recognition of visual objects. DOI:http://dx.doi.org/10.7554/eLife.22794.001 Everyday, we see thousands of different objects with many different shapes, colors, sizes and textures. Even an individual object – for example, a face – can present us with a virtually infinite number of different images, depending on from where we view it. In spite of this extraordinary variability, our brain can recognize objects in a fraction of a second and without any apparent effort. Our closest relatives in the animal kingdom, the non-human primates, share our ability to effortlessly recognize objects. For many decades, they have served as invaluable models to investigate the circuits of neurons in the brain that underlie object recognition. In recent years, mice and rats have also emerged as useful models for studying some aspects of vision. However, it was not clear whether these rodents’ brains could also perform complex visual processes like recognizing objects. Tafazoli, Safaai et al. have now recorded the responses of visual neurons in rats to a set of objects, each presented across a range of positions, sizes, rotations and brightness levels. Applying computational and mathematical tools to these responses revealed that visual information progresses through a number of brain regions. The identity of the visual objects is gradually extracted as the information travels along this pathway, in a way that becomes more and more robust to changes in how the object appears. Overall, Tafazoli, Safaai et al. suggest that rodents share with primates some of the key computations that underlie the recognition of visual objects. Therefore, the powerful sets of experimental approaches that can be used to study rats and mice – for example, genetic and molecular tools – could now be used to study the circuits of neurons that enable object recognition. Gaining a better understanding of such circuits can, in turn, inspire the design of more powerful artificial vision systems and help to develop visual prosthetics. Achieving these goals will require further work to understand how different classes of neurons in different brain regions interact as rodents perform complex visual discrimination tasks. DOI:http://dx.doi.org/10.7554/eLife.22794.002
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Affiliation(s)
- Sina Tafazoli
- Visual Neuroscience Lab, International School for Advanced Studies (SISSA), Trieste, Italy
| | - Houman Safaai
- Visual Neuroscience Lab, International School for Advanced Studies (SISSA), Trieste, Italy.,Laboratory of Neural Computation, Center for Neuroscience and Cognitive Systems @UniTn, Istituto Italiano di Tecnologia, Rovereto, Italy.,Department of Neurobiology, Harvard Medical School, Boston, United States
| | - Gioia De Franceschi
- Visual Neuroscience Lab, International School for Advanced Studies (SISSA), Trieste, Italy
| | | | - Walter Vanzella
- Visual Neuroscience Lab, International School for Advanced Studies (SISSA), Trieste, Italy
| | - Margherita Riggi
- Visual Neuroscience Lab, International School for Advanced Studies (SISSA), Trieste, Italy
| | - Federica Buffolo
- Visual Neuroscience Lab, International School for Advanced Studies (SISSA), Trieste, Italy
| | - Stefano Panzeri
- Laboratory of Neural Computation, Center for Neuroscience and Cognitive Systems @UniTn, Istituto Italiano di Tecnologia, Rovereto, Italy
| | - Davide Zoccolan
- Visual Neuroscience Lab, International School for Advanced Studies (SISSA), Trieste, Italy
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21
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Pixying Behavior: A Versatile Real-Time and Post Hoc Automated Optical Tracking Method for Freely Moving and Head Fixed Animals. eNeuro 2017; 4:eN-MNT-0245-16. [PMID: 28275712 PMCID: PMC5318546 DOI: 10.1523/eneuro.0245-16.2017] [Citation(s) in RCA: 29] [Impact Index Per Article: 4.1] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/17/2016] [Revised: 12/31/2016] [Accepted: 01/10/2017] [Indexed: 11/21/2022] Open
Abstract
Here, we describe an automated optical method for tracking animal behavior in both head-fixed and freely moving animals, in real time and offline. It takes advantage of an off-the-shelf camera system, the Pixy camera, designed as a fast vision sensor for robotics that uses a color-based filtering algorithm at 50 Hz to track objects. Using customized software, we demonstrate the versatility of our approach by first tracking the rostro-caudal motion of individual adjacent row (D1, D2) or arc whiskers (β, γ), or a single whisker and points on the whisker pad, in head-fixed mice performing a tactile task. Next, we acquired high-speed video and Pixy data simultaneously and applied the pixy-based real-time tracking to high-speed video data. With this approach, we expand the temporal resolution of the Pixy camera and track motion (post hoc) at the limit of high-speed video frame rates. Finally, we show that this system is flexible: it can be used to track individual whisker or limb position without any sophisticated object tracking algorithm, it can be used in many lighting conditions including infrared (IR); it can be used to track head rotation and location of multiple animals simultaneously. Our system makes behavioral monitoring possible in virtually any biological setting.
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22
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Thurley K, Ayaz A. Virtual reality systems for rodents. Curr Zool 2017; 63:109-119. [PMID: 29491968 PMCID: PMC5804145 DOI: 10.1093/cz/zow070] [Citation(s) in RCA: 48] [Impact Index Per Article: 6.9] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/11/2016] [Accepted: 05/26/2016] [Indexed: 01/24/2023] Open
Abstract
Over the last decade virtual reality (VR) setups for rodents have been developed and utilized to investigate the neural foundations of behavior. Such VR systems became very popular since they allow the use of state-of-the-art techniques to measure neural activity in behaving rodents that cannot be easily used with classical behavior setups. Here, we provide an overview of rodent VR technologies and review recent results from related research. We discuss commonalities and differences as well as merits and issues of different approaches. A special focus is given to experimental (behavioral) paradigms in use. Finally we comment on possible use cases that may further exploit the potential of VR in rodent research and hence inspire future studies.
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Affiliation(s)
- Kay Thurley
- Department Biologie II, Ludwig-Maximilians-Universität München, Großhaderner Straße 2, D-82152 Planegg-Martinsried, GermanyBernstein Center for Computational Neuroscience Munich, Germany,Brain Research Institute, University of Zurich, Winterthurerstrasse 190, CH-8057, Zurich, Switzerland
| | - Aslı Ayaz
- Department Biologie II, Ludwig-Maximilians-Universität München, Großhaderner Straße 2, D-82152 Planegg-Martinsried, GermanyBernstein Center for Computational Neuroscience Munich, Germany,Brain Research Institute, University of Zurich, Winterthurerstrasse 190, CH-8057, Zurich, Switzerland
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23
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Kaupert U, Thurley K, Frei K, Bagorda F, Schatz A, Tocker G, Rapoport S, Derdikman D, Winter Y. Spatial cognition in a virtual reality home-cage extension for freely moving rodents. J Neurophysiol 2017; 117:1736-1748. [PMID: 28077665 DOI: 10.1152/jn.00630.2016] [Citation(s) in RCA: 12] [Impact Index Per Article: 1.7] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/08/2016] [Revised: 12/02/2016] [Accepted: 01/04/2017] [Indexed: 11/22/2022] Open
Abstract
Virtual reality (VR) environments are a powerful tool to investigate brain mechanisms involved in the behavior of animals. With this technique, animals are usually head fixed or secured in a harness, and training for cognitively more complex VR paradigms is time consuming. A VR apparatus allowing free animal movement and the constant operator-independent training of tasks would enable many new applications. Key prospective usages include brain imaging of animal behavior when carrying a miniaturized mobile device such as a fluorescence microscope or an optetrode. Here, we introduce the Servoball, a spherical VR treadmill based on the closed-loop tracking of a freely moving animal and feedback counterrotation of the ball. Furthermore, we present the complete integration of this experimental system with the animals' group home cage, from which single individuals can voluntarily enter through a tunnel with radio-frequency identification (RFID)-automated access control and commence experiments. This automated animal sorter functions as a mechanical replacement of the experimenter. We automatically trained rats using visual or acoustic cues to solve spatial cognitive tasks and recorded spatially modulated entorhinal cells. When electrophysiological extracellular recordings from awake behaving rats were performed, head fixation can dramatically alter results, so that any complex behavior that requires head movement is impossible to achieve. We circumvented this problem with the use of the Servoball in open-field scenarios, as it allows the combination of open-field behavior with the recording of nerve cells, along with all the flexibility that a virtual environment brings. This integrated home cage with a VR arena experimental system permits highly efficient experimentation for complex cognitive experiments.NEW & NOTEWORTHY Virtual reality (VR) environments are a powerful tool for the investigation of brain mechanisms. We introduce the Servoball, a VR treadmill for freely moving rodents. The Servoball is integrated with the animals' group home cage. Single individuals voluntarily enter using automated access control. Training is highly time-efficient, even for cognitively complex VR paradigms.
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Affiliation(s)
- Ursula Kaupert
- Cognitive Neurobiology, Humboldt-Universität zu Berlin, Berlin, Germany.,Department Biology II, Ludwig-Maximilians-Universität München, München, Germany
| | - Kay Thurley
- Department Biology II, Ludwig-Maximilians-Universität München, München, Germany.,Bernstein Center for Computational Neuroscience Munich, München, Germany
| | - Katja Frei
- Cognitive Neurobiology, Humboldt-Universität zu Berlin, Berlin, Germany
| | - Francesco Bagorda
- Cognitive Neurobiology, Humboldt-Universität zu Berlin, Berlin, Germany
| | - Alexej Schatz
- Cognitive Neurobiology, Humboldt-Universität zu Berlin, Berlin, Germany
| | - Gilad Tocker
- Gonda Multidisciplinary Brain Research Center, Bar Ilan University, Ramat-Gan, Israel.,Neuroscience Department, Rappaport Faculty of Medicine and Research Institute, Technion-Israel Institute of Technology, Haifa, Israel; and
| | - Sophie Rapoport
- Neuroscience Department, Rappaport Faculty of Medicine and Research Institute, Technion-Israel Institute of Technology, Haifa, Israel; and
| | - Dori Derdikman
- Neuroscience Department, Rappaport Faculty of Medicine and Research Institute, Technion-Israel Institute of Technology, Haifa, Israel; and
| | - York Winter
- Cognitive Neurobiology, Humboldt-Universität zu Berlin, Berlin, Germany; .,NeuroCure Center of Excellence, Charité-Universitätsmedizin, Berlin, Germany
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24
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Losey DM, Stocco A, Abernethy JA, Rao RPN. Navigating a 2D Virtual World Using Direct Brain Stimulation. Front Robot AI 2016. [DOI: 10.3389/frobt.2016.00072] [Citation(s) in RCA: 8] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/13/2022] Open
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25
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Acharya L, Aghajan ZM, Vuong C, Moore JJ, Mehta MR. Causal Influence of Visual Cues on Hippocampal Directional Selectivity. Cell 2015; 164:197-207. [PMID: 26709045 DOI: 10.1016/j.cell.2015.12.015] [Citation(s) in RCA: 84] [Impact Index Per Article: 9.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/07/2015] [Revised: 10/29/2015] [Accepted: 12/01/2015] [Indexed: 11/25/2022]
Abstract
Hippocampal neurons show selectivity with respect to visual cues in primates, including humans, but this has never been found in rodents. To address this long-standing discrepancy, we measured hippocampal activity from rodents during real-world random foraging. Surprisingly, ∼ 25% of neurons exhibited significant directional modulation with respect to visual cues. To dissociate the contributions of visual and vestibular cues, we made similar measurements in virtual reality, in which only visual cues were informative. Here, we found significant directional modulation despite the severe loss of vestibular information, challenging prevailing theories of directionality. Changes in the amount of angular information in visual cues induced corresponding changes in head-directional modulation at the neuronal and population levels. Thus, visual cues are sufficient for-and play a predictable, causal role in-generating directionally selective hippocampal responses. These results dissociate hippocampal directional and spatial selectivity and bridge the gap between primate and rodent studies.
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Affiliation(s)
- Lavanya Acharya
- W.M. Keck Center for Neurophysics, Integrative Center for Learning and Memory, and Brain Research Institute, University of California at Los Angeles, Los Angeles, CA 90095, USA; Biomedical Engineering Interdepartmental Program, University of California at Los Angeles, Los Angeles, CA 90095, USA
| | - Zahra M Aghajan
- W.M. Keck Center for Neurophysics, Integrative Center for Learning and Memory, and Brain Research Institute, University of California at Los Angeles, Los Angeles, CA 90095, USA; Department of Physics and Astronomy, University of California at Los Angeles, Los Angeles, CA 90095, USA
| | - Cliff Vuong
- W.M. Keck Center for Neurophysics, Integrative Center for Learning and Memory, and Brain Research Institute, University of California at Los Angeles, Los Angeles, CA 90095, USA; Department of Physics and Astronomy, University of California at Los Angeles, Los Angeles, CA 90095, USA
| | - Jason J Moore
- W.M. Keck Center for Neurophysics, Integrative Center for Learning and Memory, and Brain Research Institute, University of California at Los Angeles, Los Angeles, CA 90095, USA; Neuroscience Interdepartmental Program, University of California at Los Angeles, Los Angeles, CA 90095, USA
| | - Mayank R Mehta
- W.M. Keck Center for Neurophysics, Integrative Center for Learning and Memory, and Brain Research Institute, University of California at Los Angeles, Los Angeles, CA 90095, USA; Department of Physics and Astronomy, University of California at Los Angeles, Los Angeles, CA 90095, USA; Neuroscience Interdepartmental Program, University of California at Los Angeles, Los Angeles, CA 90095, USA; Departments of Neurology and Neurobiology, University of California at Los Angeles, Los Angeles, CA 90095, USA.
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Jandl N, Sprenger A, Wojak J, Göttlich M, Münte T, Krämer U, Helmchen C. Dissociable cerebellar activity during spatial navigation and visual memory in bilateral vestibular failure. Neuroscience 2015; 305:257-67. [DOI: 10.1016/j.neuroscience.2015.07.089] [Citation(s) in RCA: 14] [Impact Index Per Article: 1.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/18/2015] [Revised: 07/31/2015] [Accepted: 07/31/2015] [Indexed: 11/29/2022]
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Mehta MR. From synaptic plasticity to spatial maps and sequence learning. Hippocampus 2015; 25:756-62. [DOI: 10.1002/hipo.22472] [Citation(s) in RCA: 42] [Impact Index Per Article: 4.7] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Accepted: 03/23/2015] [Indexed: 01/22/2023]
Affiliation(s)
- Mayank R. Mehta
- Department of Physics & Astronomy; UCLA; Keck Center for Neurophysics; UCLA
- Department of Neurology; UCLA
- Department of Neurobiology; UCLA, Integrative Center for Learning and Memory; UCLA
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Abstract
As a research tool, virtual environments (VEs) hold immense promise for brain scientists. Yet to fully realize this potential in non-human systems, theoretical and conceptual perspectives must be developed. When selectively coupled to nervous systems, virtual environments can help us better understand the functional architecture of animals’ brains during naturalistic behaviors. While this will no doubt allow us to further our understanding of the neural basis of behavior, there is also an opportunity to uncover the diversity inherent in brain activity and behavior. This is due to two properties of virtual environments: the ability to create sensory illusions, and the ability to dilate space and/or time. These and other potential manipulations will be characterized as the effects of virtuality. In addition, the systems-level outcomes of virtual environment enhanced perception will be discussed in the context of the uncanny valley and other expected relationships between emotional valence, cognition, and training. These effects and their usefulness for brain science will be understood in the context of three types of neurobehavioral phenomena: sensorimotor integration, spatial navigation, and interactivity. For each of these behaviors, a combination of illusory and space/time dilation examples will be reviewed. Once these examples are presented, the implications for improving upon virtual models for more directly inducing the mental phenomena of illusion and space/time dilation will be considered. To conclude, future directions for integrating the use of VEs into a strategy of broader biological inquiry will be presented.
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Aghajan ZM, Acharya L, Moore JJ, Cushman JD, Vuong C, Mehta MR. Impaired spatial selectivity and intact phase precession in two-dimensional virtual reality. Nat Neurosci 2014; 18:121-8. [DOI: 10.1038/nn.3884] [Citation(s) in RCA: 169] [Impact Index Per Article: 16.9] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/12/2014] [Accepted: 10/29/2014] [Indexed: 02/07/2023]
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Aronov D, Tank DW. Engagement of neural circuits underlying 2D spatial navigation in a rodent virtual reality system. Neuron 2014; 84:442-56. [PMID: 25374363 DOI: 10.1016/j.neuron.2014.08.042] [Citation(s) in RCA: 170] [Impact Index Per Article: 17.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Accepted: 08/20/2014] [Indexed: 10/24/2022]
Abstract
Virtual reality (VR) enables precise control of an animal's environment and otherwise impossible experimental manipulations. Neural activity in rodents has been studied on virtual 1D tracks. However, 2D navigation imposes additional requirements, such as the processing of head direction and environment boundaries, and it is unknown whether the neural circuits underlying 2D representations can be sufficiently engaged in VR. We implemented a VR setup for rats, including software and large-scale electrophysiology, that supports 2D navigation by allowing rotation and walking in any direction. The entorhinal-hippocampal circuit, including place, head direction, and grid cells, showed 2D activity patterns similar to those in the real world. Furthermore, border cells were observed, and hippocampal remapping was driven by environment shape, suggesting functional processing of virtual boundaries. These results illustrate that 2D spatial representations can be engaged by visual and rotational vestibular stimuli alone and suggest a novel VR tool for studying rat navigation.
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Affiliation(s)
- Dmitriy Aronov
- Princeton Neuroscience Institute, Bezos Center for Neural Circuit Dynamics, Princeton University, Princeton, NJ 08544, USA
| | - David W Tank
- Princeton Neuroscience Institute, Bezos Center for Neural Circuit Dynamics, Princeton University, Princeton, NJ 08544, USA.
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Thurley K, Henke J, Hermann J, Ludwig B, Tatarau C, Wätzig A, Herz AVM, Grothe B, Leibold C. Mongolian gerbils learn to navigate in complex virtual spaces. Behav Brain Res 2014; 266:161-8. [PMID: 24631394 DOI: 10.1016/j.bbr.2014.03.007] [Citation(s) in RCA: 9] [Impact Index Per Article: 0.9] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/29/2013] [Revised: 02/21/2014] [Accepted: 03/03/2014] [Indexed: 10/25/2022]
Abstract
Virtual reality (VR) environments are increasingly used to study spatial navigation in rodents. So far behavioral paradigms in virtual realities have been limited to linear tracks or open fields. However, little is known whether rodents can learn to navigate in more complex virtual spaces. We used a VR setup with a spherical treadmill but no head-fixation, which permits animals not only to move in a virtual environment but also to freely rotate around their vertical body axis. We trained Mongolian gerbils to perform spatial tasks in virtual mazes of different complexity. Initially the animals learned to run back and forth between the two ends of a virtual linear track for food reward. Performance, measured as path length and running time between the virtual reward locations, improved to asymptotic performance within about five training sessions. When more complex mazes were presented after this training epoch, the animals generalized and explored the new environments already at their first exposure. In a final experiment, the animals also learned to perform a two-alternative forced choice task in a virtual Y-maze. Our data thus shows that gerbils can be trained to solve spatial tasks in virtual mazes and that this behavior can be used as a readout for psychophysical measurements.
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Affiliation(s)
- Kay Thurley
- Department Biologie II, Ludwig-Maximilians-Universität München, Großhaderner Str. 2, 82152 Planegg-Martinsried, Germany; Bernstein Center for Computational Neuroscience Munich, Großhaderner Str. 2, 82152 Planegg-Martinsried, Germany.
| | - Josephine Henke
- Department Biologie II, Ludwig-Maximilians-Universität München, Großhaderner Str. 2, 82152 Planegg-Martinsried, Germany
| | - Joachim Hermann
- Department Biologie II, Ludwig-Maximilians-Universität München, Großhaderner Str. 2, 82152 Planegg-Martinsried, Germany; Bernstein Center for Computational Neuroscience Munich, Großhaderner Str. 2, 82152 Planegg-Martinsried, Germany
| | - Benedikt Ludwig
- Department Biologie II, Ludwig-Maximilians-Universität München, Großhaderner Str. 2, 82152 Planegg-Martinsried, Germany
| | - Christian Tatarau
- Department Biologie II, Ludwig-Maximilians-Universität München, Großhaderner Str. 2, 82152 Planegg-Martinsried, Germany
| | - Aline Wätzig
- Department Biologie II, Ludwig-Maximilians-Universität München, Großhaderner Str. 2, 82152 Planegg-Martinsried, Germany
| | - Andreas V M Herz
- Department Biologie II, Ludwig-Maximilians-Universität München, Großhaderner Str. 2, 82152 Planegg-Martinsried, Germany; Bernstein Center for Computational Neuroscience Munich, Großhaderner Str. 2, 82152 Planegg-Martinsried, Germany
| | - Benedikt Grothe
- Department Biologie II, Ludwig-Maximilians-Universität München, Großhaderner Str. 2, 82152 Planegg-Martinsried, Germany; Bernstein Center for Computational Neuroscience Munich, Großhaderner Str. 2, 82152 Planegg-Martinsried, Germany
| | - Christian Leibold
- Department Biologie II, Ludwig-Maximilians-Universität München, Großhaderner Str. 2, 82152 Planegg-Martinsried, Germany; Bernstein Center for Computational Neuroscience Munich, Großhaderner Str. 2, 82152 Planegg-Martinsried, Germany
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