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He Y, Bond-Lamberty B, Myers-Pigg AN, Newcomer ME, Ladau J, Holmquist JR, Brown JB, Falco N. Effects of spatial variability in vegetation phenology, climate, landcover, biodiversity, topography, and soil property on soil respiration across a coastal ecosystem. Heliyon 2024; 10:e30470. [PMID: 38726202 PMCID: PMC11079102 DOI: 10.1016/j.heliyon.2024.e30470] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/31/2023] [Revised: 03/21/2024] [Accepted: 04/26/2024] [Indexed: 05/12/2024] Open
Abstract
Coastal terrestrial-aquatic interfaces (TAIs) are crucial contributors to global biogeochemical cycles and carbon exchange. The soil carbon dioxide (CO2) efflux in these transition zones is however poorly understood due to the high spatiotemporal dynamics of TAIs, as various sub-ecosystems in this region are compressed and expanded by complex influences of tides, changes in river levels, climate, and land use. We focus on the Chesapeake Bay region to (i) investigate the spatial heterogeneity of the coastal ecosystem and identify spatial zones with similar environmental characteristics based on the spatial data layers, including vegetation phenology, climate, landcover, diversity, topography, soil property, and relative tidal elevation; (ii) understand the primary driving factors affecting soil respiration within sub-ecosystems of the coastal ecosystem. Specifically, we employed hierarchical clustering analysis to identify spatial regions with distinct environmental characteristics, followed by the determination of main driving factors using Random Forest regression and SHapley Additive exPlanations. Maximum and minimum temperature are the main drivers common to all sub-ecosystems, while each region also has additional unique major drivers that differentiate them from one another. Precipitation exerts an influence on vegetated lands, while soil pH value holds importance specifically in forested lands. In croplands characterized by high clay content and low sand content, the significant role is attributed to bulk density. Wetlands demonstrate the importance of both elevation and sand content, with clay content being more relevant in non-inundated wetlands than in inundated wetlands. The topographic wetness index significantly contributes to the mixed vegetation areas, including shrub, grass, pasture, and forest. Additionally, our research reveals that dense vegetation land covers and urban/developed areas exhibit distinct soil property drivers. Overall, our research demonstrates an efficient method of employing various open-source remote sensing and GIS datasets to comprehend the spatial variability and soil respiration mechanisms in coastal TAI. There is no one-size-fits-all approach to modeling carbon fluxes released by soil respiration in coastal TAIs, and our study highlights the importance of further research and monitoring practices to improve our understanding of carbon dynamics and promote the sustainable management of coastal TAIs.
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Affiliation(s)
- Yinan He
- Earth and Environmental Sciences Area, Lawrence Berkeley National Laboratory, 1 Cyclotron Road, Berkeley, CA, 94720-8126, USA
| | - Ben Bond-Lamberty
- Joint Global Change Research Institute, Pacific Northwest National Laboratory, College Park, MD, 20740, USA
| | - Allison N. Myers-Pigg
- Marine and Coastal Research Laboratory, Pacific Northwest National Laboratory, Sequim, WA, 98382, USA
- Department of Environmental Sciences, University of Toledo, Toledo, OH, 43606, USA
| | - Michelle E. Newcomer
- Earth and Environmental Sciences Area, Lawrence Berkeley National Laboratory, 1 Cyclotron Road, Berkeley, CA, 94720-8126, USA
| | - Joshua Ladau
- Computational Biosciences Group, Lawrence Berkeley National Laboratory, 1 Cyclotron Road, Berkeley, CA, 94720, USA
| | - James R. Holmquist
- Smithsonian Environmental Research Center, 647 Contees Wharf Road, Edgewater, MD, 21037, USA
| | - James B. Brown
- Computational Biosciences Group, Lawrence Berkeley National Laboratory, 1 Cyclotron Road, Berkeley, CA, 94720, USA
| | - Nicola Falco
- Earth and Environmental Sciences Area, Lawrence Berkeley National Laboratory, 1 Cyclotron Road, Berkeley, CA, 94720-8126, USA
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Raich JW, Kaiser MS, Dornbush ME, Martin JG, Valverde-Barrantes OJ. Multiple factors co-limit short-term in situ soil carbon dioxide emissions. PLoS One 2023; 18:e0279839. [PMID: 36791073 PMCID: PMC9931153 DOI: 10.1371/journal.pone.0279839] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/18/2021] [Accepted: 12/15/2022] [Indexed: 02/16/2023] Open
Abstract
Soil respiration is a major source of atmospheric CO2. If it increases with warming, it will counteract efforts to minimize climate change. To improve understanding of environmental controls over soil CO2 emission, we applied generalized linear modeling to a large dataset of in situ measurements of short-term soil respiration rate, with associated environmental attributes, which was gathered over multiple years from four locations that varied in climate, soil type, and vegetation. Soil respiration includes many CO2-producing processes: we theorized that different environmental factors could limit each process distinctly, thereby diminishing overall CO2 emissions. A baseline model that included soil temperature, soil volumetric water content, and their interaction was effective in estimating soil respiration at all four locations (p < 0.0001). Model fits, based on model log likelihoods, improved continuously as additional covariates were added, including mean daily air temperature, enhanced vegetation index (EVI), and quadratic terms for soil temperature and water content, and their interactions. The addition of land cover and its direct interactions with environmental variables further improved model fits. Significant interactions between covariates were observed at each location and at every stage of analysis, but the interaction terms varied among sites and models, and did not consistently maintain importance in more complex models. A main-effects model was therefore tested, which included soil temperature and water content, their quadratic effects, EVI, and air temperature, but no interactions. In that case all six covariates were significant (p < 0.0001) when applied across sites. We infer that local-scale soil-CO2 emissions are commonly co-limited by EVI and air temperature, in addition to soil temperature and water content. Importantly, the quadratic soil temperature and moisture terms were significantly negative: estimated soil-CO2 emissions declined when soil temperature exceeded 22.5°C, and as soil moisture differed from the optimum of 0.27 m3 m-3.
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Affiliation(s)
- James W. Raich
- Department of Ecology, Evolution and Organismal Biology, Iowa State University, Ames, Iowa, United States of America
| | - Mark S. Kaiser
- Department of Statistics, Iowa State University, Ames, Iowa, United States of America
| | - Mathew E. Dornbush
- Cofrin School of Business, University of Wisconsin-Green Bay, Green Bay, Wisconsin, United States of America
| | - Jonathan G. Martin
- Natural Resources, Northland College, Ashland, Wisconsin, United States of America
| | - O. J. Valverde-Barrantes
- Institute of Environment, Department of Biological Sciences, Florida International University, Miami, Florida, United States of America
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Sanjita C, Thounaojam RS, Singh TB, Singh ND. Soil CO2 efflux variability influenced by different factors in the subtropical sacred groves of Manipur, North-East India. Trop Ecol 2022. [DOI: 10.1007/s42965-022-00225-1] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/01/2022]
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Li Y, Wu H, Wang J, Cui L, Tian D, Wang J, Zhang X, Yan L, Yan Z, Zhang K, Kang X, Song B. Plant biomass and soil organic carbon are main factors influencing dry-season ecosystem carbon rates in the coastal zone of the Yellow River Delta. PLoS One 2019; 14:e0210768. [PMID: 30640931 PMCID: PMC6331112 DOI: 10.1371/journal.pone.0210768] [Citation(s) in RCA: 10] [Impact Index Per Article: 1.7] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/11/2018] [Accepted: 12/31/2018] [Indexed: 12/20/2022] Open
Abstract
Coastal wetlands are considered as a significant sink of global carbon due to their tremendous organic carbon storage. Coastal CO2 and CH4 flux rates play an important role in regulating atmospheric CO2 and CH4 concentrations. However, the relative contributions of vegetation, soil properties, and spatial structure on dry-season ecosystem carbon (C) rates (net ecosystem CO2 exchange, NEE; ecosystem respiration, ER; gross ecosystem productivity, GEP; and CH4) remain unclear at a regional scale. Here, we compared dry-season ecosystem C rates, plant, and soil properties across three vegetation types from 13 locations at a regional scale in the Yellow River Delta (YRD). The results showed that the Phragmites australis stand had the greatest NEE (-1365.4 μmol m-2 s-1), ER (660.2 μmol m-2 s-1), GEP (-2025.5 μmol m-2 s-1) and acted as a CH4 source (0.27 μmol m-2 s-1), whereas the Suaeda heteroptera and Tamarix chinensis stands uptook CH4 (-0.02 to -0.12 μmol m-2 s-1). Stepwise multiple regression analysis demonstrated that plant biomass was the main factor explaining all of the investigated carbon rates (GEP, ER, NEE, and CH4); while soil organic carbon was shown to be the most important for explaining the variability in the processes of carbon release to the atmosphere, i.e., ER and CH4. Variation partitioning results showed that vegetation and soil properties played equally important roles in shaping the pattern of C rates in the YRD. These results provide a better understanding of the link between ecosystem C rates and environmental drivers, and provide a framework to predict regional-scale ecosystem C fluxes under future climate change.
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Affiliation(s)
- Yong Li
- Beijing Key Laboratory of Wetland Services and Restoration, Institute of Wetland Research, Chinese Academy of Forestry, Beijing, China
| | - Haidong Wu
- Beijing Key Laboratory of Wetland Services and Restoration, Institute of Wetland Research, Chinese Academy of Forestry, Beijing, China
| | - Jinzhi Wang
- Beijing Key Laboratory of Wetland Services and Restoration, Institute of Wetland Research, Chinese Academy of Forestry, Beijing, China
| | - Lijuan Cui
- Beijing Key Laboratory of Wetland Services and Restoration, Institute of Wetland Research, Chinese Academy of Forestry, Beijing, China
| | - Dashuan Tian
- Key Laboratory of Ecosystem Network Observation and Modeling, Institute of Geographic Sciences and Natural Resources Research, Chinese Academy of Sciences, Beijing, China
| | - Jinsong Wang
- Key Laboratory of Ecosystem Network Observation and Modeling, Institute of Geographic Sciences and Natural Resources Research, Chinese Academy of Sciences, Beijing, China
| | - Xiaodong Zhang
- Beijing Key Laboratory of Wetland Services and Restoration, Institute of Wetland Research, Chinese Academy of Forestry, Beijing, China
| | - Liang Yan
- Beijing Key Laboratory of Wetland Services and Restoration, Institute of Wetland Research, Chinese Academy of Forestry, Beijing, China
| | - Zhongqing Yan
- Beijing Key Laboratory of Wetland Services and Restoration, Institute of Wetland Research, Chinese Academy of Forestry, Beijing, China
| | - Kerou Zhang
- Beijing Key Laboratory of Wetland Services and Restoration, Institute of Wetland Research, Chinese Academy of Forestry, Beijing, China
| | - Xiaoming Kang
- Beijing Key Laboratory of Wetland Services and Restoration, Institute of Wetland Research, Chinese Academy of Forestry, Beijing, China
- * E-mail: (X.K); (B.S.)
| | - Bing Song
- School of Resources and Environmental Engineering, Ludong University, Yantai, China
- * E-mail: (X.K); (B.S.)
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Muñoz-Rojas M, Lewandrowski W, Erickson TE, Dixon KW, Merritt DJ. Soil respiration dynamics in fire affected semi-arid ecosystems: Effects of vegetation type and environmental factors. THE SCIENCE OF THE TOTAL ENVIRONMENT 2016; 572:1385-1394. [PMID: 26927962 DOI: 10.1016/j.scitotenv.2016.02.086] [Citation(s) in RCA: 27] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 11/30/2015] [Revised: 02/12/2016] [Accepted: 02/12/2016] [Indexed: 06/05/2023]
Abstract
Soil respiration (Rs) is the second largest carbon flux in terrestrial ecosystems and therefore plays a crucial role in global carbon (C) cycling. This biogeochemical process is closely related to ecosystem productivity and soil fertility and is considered as a key indicator of soil health and quality reflecting the level of microbial activity. Wildfires can have a significant effect on Rs rates and the magnitude of the impacts will depend on environmental factors such as climate and vegetation, fire severity and meteorological conditions post-fire. In this research, we aimed to assess the impacts of a wildfire on the soil CO2 fluxes and soil respiration in a semi-arid ecosystem of Western Australia, and to understand the main edaphic and environmental drivers controlling these fluxes for different vegetation types. Our results demonstrated increased rates of Rs in the burnt areas compared to the unburnt control sites, although these differences were highly dependent on the type of vegetation cover and time since fire. The sensitivity of Rs to temperature (Q10) was also larger in the burnt site compared to the control. Both Rs and soil organic C were consistently higher under Eucalyptus trees, followed by Acacia shrubs. Triodia grasses had the lowest Rs rates and C contents, which were similar to those found under bare soil patches. Regardless of the site condition (unburnt or burnt), Rs was triggered during periods of higher temperatures and water availability and environmental factors (temperature and moisture) could explain a large fraction of Rs variability, improving the relationship of moisture or temperature as single factors with Rs. This study demonstrates the importance of assessing CO2 fluxes considering both abiotic factors and vegetation types after disturbances such as fire which is particularly important in heterogeneous semi-arid areas with patchy vegetation distribution where CO2 fluxes can be largely underestimated.
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Affiliation(s)
- Miriam Muñoz-Rojas
- The University of Western Australia, School of Plant Biology, Crawley 6009, WA, Australia; Kings Park and Botanic Garden, Kings Park, Perth 6005, WA, Australia; Curtin University, Department of Environment and Agriculture, Perth 6845, WA, Australia.
| | - Wolfgang Lewandrowski
- The University of Western Australia, School of Plant Biology, Crawley 6009, WA, Australia; Kings Park and Botanic Garden, Kings Park, Perth 6005, WA, Australia
| | - Todd E Erickson
- The University of Western Australia, School of Plant Biology, Crawley 6009, WA, Australia; Kings Park and Botanic Garden, Kings Park, Perth 6005, WA, Australia
| | - Kingsley W Dixon
- The University of Western Australia, School of Plant Biology, Crawley 6009, WA, Australia; Kings Park and Botanic Garden, Kings Park, Perth 6005, WA, Australia; Curtin University, Department of Environment and Agriculture, Perth 6845, WA, Australia
| | - David J Merritt
- The University of Western Australia, School of Plant Biology, Crawley 6009, WA, Australia; Kings Park and Botanic Garden, Kings Park, Perth 6005, WA, Australia
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An Experimental Comparison of Two Methods on Photosynthesis Driving Soil Respiration: Girdling and Defoliation. PLoS One 2015; 10:e0132649. [PMID: 26177498 PMCID: PMC4503459 DOI: 10.1371/journal.pone.0132649] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/14/2014] [Accepted: 06/18/2015] [Indexed: 11/24/2022] Open
Abstract
Previous studies with different experimental methods have demonstrated that photosynthesis significantly influences soil respiration (RS). To compare the experimental results of different methods, RS after girdling and defoliation was measured in five-year-old seedlings of Fraxinus mandshurica from June to September. Girdling and defoliation significantly reduced RS by 33% and 25% within 4 days, and 40% and 32% within the entire treatment period, respectively. The differential response of RS to girdling and defoliation was a result of the over-compensation for RS after girdling and redistribution of stored carbon after defoliation. No significant effect on RS was observed between girdling and defoliation treatment, while the soluble sugar content in fine roots was higher in defoliation than in girdling treatment, indicating that defoliation had less compensation effect for RS after interrupting photosynthates supply. We confirm the close coupling of RS with photosynthesis and recommend defoliation for further studies to estimate the effect of photosynthesis on RS.
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Soil respiration under different land uses in Eastern China. PLoS One 2015; 10:e0124198. [PMID: 25875998 PMCID: PMC4395438 DOI: 10.1371/journal.pone.0124198] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/30/2014] [Accepted: 02/26/2015] [Indexed: 11/19/2022] Open
Abstract
Land-use change has a crucial influence on soil respiration, which further affects soil nutrient availability and carbon stock. We monitored soil respiration rates under different land-use types (tea gardens with three production levels, adjacent woodland, and a vegetable field) in Eastern China at weekly intervals over a year using the dynamic closed chamber method. The relationship between soil respiration and environmental factors was also evaluated. The soil respiration rate exhibited a remarkable single peak that was highest in July/August and lowest in January. The annual cumulative respiration flux increased by 25.6% and 20.9% in the tea garden with high production (HP) and the vegetable field (VF), respectively, relative to woodland (WL). However, no significant differences were observed between tea gardens with medium production (MP), low production (LP), WL, and VF. Soil respiration rates were significantly and positively correlated with organic carbon, total nitrogen, and available phosphorous content. Each site displayed a significant exponential relationship between soil respiration and soil temperature measured at 5 cm depth, which explained 84–98% of the variation in soil respiration. The model with a combination of soil temperature and moisture was better at predicting the temporal variation of soil respiration rate than the single temperature model for all sites. Q10 was 2.40, 2.00, and 1.86–1.98 for VF, WL, and tea gardens, respectively, indicating that converting WL to VF increased and converting to tea gardens decreased the sensitivity of soil respiration to temperature. The equation of the multiple linear regression showed that identical factors, including soil organic carbon (SOC), soil water content (SWC), pH, and water soluble aluminum (WSAl), drove the changes in soil respiration and Q10 after conversion of land use. Temporal variations of soil respiration were mainly controlled by soil temperature, whereas spatial variations were influenced by SOC, SWC, pH, and WSAl.
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Primary effects of extracellular enzyme activity and microbial community on carbon and nitrogen mineralization in estuarine and tidal wetlands. Appl Microbiol Biotechnol 2014; 99:2895-909. [DOI: 10.1007/s00253-014-6187-4] [Citation(s) in RCA: 35] [Impact Index Per Article: 3.2] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/24/2014] [Revised: 10/21/2014] [Accepted: 10/22/2014] [Indexed: 11/28/2022]
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