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Shaji A, Kumaresan A, Sinha MK, Nag P, Patil S, Jeyakumar S, Gowdar Veerappa V, Manimaran A, Ramesha K. Identification of potential differences in salivary proteomic profiles between estrus and diestrus stage of estrous cycle in dairy cows. Syst Biol Reprod Med 2024; 70:204-217. [PMID: 39008339 DOI: 10.1080/19396368.2024.2370328] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Submit a Manuscript] [Subscribe] [Scholar Register] [Received: 07/20/2023] [Accepted: 06/15/2024] [Indexed: 07/16/2024]
Abstract
In the present study, a comparative global high-throughput proteomic analysis strategy was used to identify proteomic differences between estrus and diestrus stage of estrous cycle in dairy cows. Saliva was collected from cows during estrus and diestrus, and subjected to LC-MS/MS-based proteomic analysis. A total of 2842 proteins were detected in the saliva of cows, out of which, 2437 and 1428 non-redundant proteins were identified in estrous and diestrous saliva, respectively. Further, it was found that 1414 and 405 salivary proteins were specific to estrus and diestrus, respectively while 1023 proteins were common to both groups. Among the significantly dysregulated proteins, the expression of 56 proteins was down-regulated (abundance ratio <0.5) while 40 proteins were up-regulated (abundance ratio > 2) in estrous compared to diestrous saliva. The proteins, such as HSD17B12, INHBA, HSP70, ENO1, SRD5A1, MOS, AMH, ECE2, PDGFA, OPRK1, SYN1, CCNC, PLIN5, CETN1, AKR1C4, NMNAT1, CYP2E1, and CYP19A1 were detected only in the saliva samples derived from estrous cows. Considerable number of proteins detected in the saliva of estrous cows were found to be involved in metabolic pathway, PI3K-Akt signaling pathway, toll-like receptor signaling pathway, steroid biosynthesis pathway, insulin signaling pathway, calcium signaling pathway, estrogen signaling pathway, oxytocin signaling pathway, TGF-β signaling pathway and oocyte meiosis. On the other hand, proteins detected in saliva of diestrous cows were involved mainly in metabolic pathway. Collectively, these data provide preliminary evidence of a potential difference in salivary proteins at different stages of estrous cycle in dairy cows.
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Affiliation(s)
- Arsha Shaji
- Theriogenology Laboratory, Southern Regional Station of ICAR-National Dairy Research Institute, Bengaluru, India
| | - Arumugam Kumaresan
- Theriogenology Laboratory, Southern Regional Station of ICAR-National Dairy Research Institute, Bengaluru, India
| | - Manish Kumar Sinha
- Theriogenology Laboratory, Southern Regional Station of ICAR-National Dairy Research Institute, Bengaluru, India
| | - Pradeep Nag
- Theriogenology Laboratory, Southern Regional Station of ICAR-National Dairy Research Institute, Bengaluru, India
| | - Shivanagouda Patil
- Theriogenology Laboratory, Southern Regional Station of ICAR-National Dairy Research Institute, Bengaluru, India
| | - Sakthivel Jeyakumar
- Dairy Production Section, Southern Regional Station of ICAR-National Dairy Research Institute, Bengaluru, India
| | - Vedamurthy Gowdar Veerappa
- Dairy Production Section, Southern Regional Station of ICAR-National Dairy Research Institute, Bengaluru, India
| | - Ayyasamy Manimaran
- Dairy Production Section, Southern Regional Station of ICAR-National Dairy Research Institute, Bengaluru, India
| | - Kerekoppa Ramesha
- Dairy Production Section, Southern Regional Station of ICAR-National Dairy Research Institute, Bengaluru, India
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Kumar V, Joshi M, Vats A, Kumar LK, Verma SK, Neeraj, Baithalu RK, Veerappa VG, Singh D, Onteru SK. Mucin and salt combination simulate typical fern-like pattern of buffalo saliva smear at estrus. Microsc Res Tech 2024; 87:1753-1765. [PMID: 38504429 DOI: 10.1002/jemt.24556] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/14/2023] [Revised: 02/18/2024] [Accepted: 03/07/2024] [Indexed: 03/21/2024]
Abstract
Estrus detection in buffaloes primarily relies on behavioral and physiological signs. Especially during summer, these signs are less prominent to recognize. Thus, estrus detection is a pronounced challenge within the realm of buffalo husbandry, particularly in the summer. Therefore, a simple and accurate estrus detection method is required for buffalo farmers. The observation of fern-like salivary crystallization patterns is one such simple method to detect estrus in buffaloes, bactrian camels, beagle bitches, and cows. However, the exact mechanism for the formation of typical fern-like is not known. We hypothesized that it might be because of the estrus-specific mucins and salts. To test this hypothesis, we prepared the smears by combining different concentrations of mucin type -2 (MUC2) and -3 (MUC3) with sodium chloride (NaCl). Microscopic examination confirmed that fern-like patterns resulted from a combination of the MUC3 and NaCl produced more realistic fern patterns than that of MUC2 or BSA with salt. To predict possible mucin and salt concentration showing natural fern-like patterns at the estrus stage in buffalo saliva, we constructed a guide tree of artificially generated fern-like patterns using an image analysis online tool. This computation analysis revealed that most of the natural buffalo estrus saliva samples showing typical fern-like patterns clustered in the cluster 2 of the guide tree comprising of 13 clusters. In the cluster 2, MUC3 in combination with the salt concentrations of 100, 150, and 250 mM was commonly found in a close proximity to the natural typical fern-like patterns of saliva smear of buffaloes at estrus. Conclusively, the buffalo saliva at estrus is predicted to have a gel-forming heavily glycosylated protein such as mucin along with at least 100 mM of NaCl. RESEARCH HIGHLIGHTS: Glycoprotein and salts combination replicates fern-like pattern of buffalo saliva at estrus. MUC3 and NaCl salt combination produces more realistic fern-like patterns compared with MUC2 or BSA and salt combination. MUC3 with NaCl at 100, 150, and 250 mM consistently resembled natural estrus saliva fern-like patterns. During estrus, buffalo saliva is expected to contain heavily glycosylated mucin and at least of 100 mM NaCl.
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Affiliation(s)
- Varun Kumar
- Molecular Endocrinology, Functional Genomics and Systems Biology Lab, Animal Biochemistry Division, National Dairy Research Institute, Karnal, Haryana, India
| | - Mansi Joshi
- Molecular Endocrinology, Functional Genomics and Systems Biology Lab, Animal Biochemistry Division, National Dairy Research Institute, Karnal, Haryana, India
| | - Ashutosh Vats
- Molecular Endocrinology, Functional Genomics and Systems Biology Lab, Animal Biochemistry Division, National Dairy Research Institute, Karnal, Haryana, India
| | - Lal Krishan Kumar
- Molecular Endocrinology, Functional Genomics and Systems Biology Lab, Animal Biochemistry Division, National Dairy Research Institute, Karnal, Haryana, India
| | - Surya Kant Verma
- Molecular Endocrinology, Functional Genomics and Systems Biology Lab, Animal Biochemistry Division, National Dairy Research Institute, Karnal, Haryana, India
| | - Neeraj
- Animal Reproduction, Gynaecology and Obstetrics, ICAR-National Dairy Research Institute, Karnal, Haryana, India
| | - Rubina Kumari Baithalu
- Animal Reproduction, Gynaecology and Obstetrics, ICAR-National Dairy Research Institute, Karnal, Haryana, India
| | - Vedamurthy Gowdar Veerappa
- Molecular Endocrinology, Functional Genomics and Systems Biology Lab, Animal Biochemistry Division, National Dairy Research Institute, Karnal, Haryana, India
| | - Dheer Singh
- Molecular Endocrinology, Functional Genomics and Systems Biology Lab, Animal Biochemistry Division, National Dairy Research Institute, Karnal, Haryana, India
| | - Suneel Kumar Onteru
- Molecular Endocrinology, Functional Genomics and Systems Biology Lab, Animal Biochemistry Division, National Dairy Research Institute, Karnal, Haryana, India
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Diagnostic tests based on pattern formation in drying body fluids - A mapping review. Colloids Surf B Biointerfaces 2021; 208:112092. [PMID: 34537495 DOI: 10.1016/j.colsurfb.2021.112092] [Citation(s) in RCA: 4] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/27/2021] [Revised: 08/30/2021] [Accepted: 08/31/2021] [Indexed: 01/25/2023]
Abstract
There are numerous diagnostic tests based on pattern formation in desiccating body fluids, where the pattern or some of its characteristics constitute the diagnostic test outcome. However, partially due to the development in different time periods, and partially due to publications in languages different from English, most of these diagnostic tests exist as separate approaches and have never been grouped, systematized, nor compared with each other. In the present mapping review, we performed a wide literature search with the aim to collect all diagnostic tests based on pattern formation in desiccating body fluids. Furthermore, we grouped the identified diagnostic tests according to their experimental protocols, type of body fluids investigated, and target conditions, and propose so for the first time a classification of different diagnostic tests based on pattern formation in desiccating body fluids. The literature search revealed 1603 publications, out of which 141 were included into the review. Following three main classification criteria (way of deposition of the fluid for desiccation, addition of reagents, and spatial restrictions during evaporation), we identified six different methods; following a further classification concerning the analyzed body fluid we identified 30 different diagnostic tests based on pattern formation in evaporating body fluids. Amongst these tests are well-known procedures such as ferning tests (tear ferning for the assessment of tear film quality, saliva and cervical mucus ferning for the detection of the fertile period, and amniotic fluid ferning for the diagnosis of fetal membrane rupture), whereas other tests are less well-established. In the latter group, the most frequently investigated body fluids were serum, saliva, and blood; the most frequently addressed target conditions were cancer, inflammation, and benign tumors. We recommend conducting further systematic reviews and meta-analyses concerning groups of methods addressing the same target condition.
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Surla GN, Hebbar A, Kumar V, Nayan V, Vedamurthy VG, Singh D, Onteru SK. Validation of salivary ferning based estrus identification method in a large population of water buffaloes (Bubalus bubalis) using Foldscope. Reprod Biol 2021; 21:100528. [PMID: 34171716 DOI: 10.1016/j.repbio.2021.100528] [Citation(s) in RCA: 5] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/01/2020] [Revised: 06/06/2021] [Accepted: 06/08/2021] [Indexed: 10/21/2022]
Abstract
Missing an estrus event is an economic problem in buffaloes because of lack of a simple and accurate estrus identification method. Saliva, a non-invasive fluid available every time, showed typical fern-like crystallization patterns at early estrus in buffaloes. However, to implement this salivary ferning based estrus identification method in the field conditions, the present study, for the first time, validated this method in four buffalo population samples (PS) representing four different field scenarios, an organized herd (PS1, 10 buffaloes monitored daily for a year (149 estrus events)), artificial insemination (AI) centers (PS2, 114 buffaloes brought for AI), induced estrus condition (PS3, 44 buffaloes) and farmers' doorsteps (PS4, 275 random buffaloes with unknown reproductive history and no estrous signs). Totally, 582 saliva samples were collected from 443 buffaloes. Salivary smears were observed under a simple microscope and/or a less expensive (< 1USD) paper microscope, Foldscope. On the basis of salivary fern-like patterns, the proportions of estrus identification were significantly different among PS. Specifically, the proportions in the PS1 (0.74, P < 0.0001) and PS4 (0.08, P < 0.05) were significantly higher than their population proportion estimates, 0.5 and zero, respectively. Therefore, this estrus identification method is much useful in the PS1 and PS4, the practical field scenarios requiring an accurate estrus prediction method, compared to the PS2 and PS3. Especially, this method is 91 % confirmatory to detect early estrus in PS4. Therefore, salivary ferning is a useful technique to identify early estrus in buffaloes in the field conditions at farmers' doorsteps.
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Affiliation(s)
- Gangu Naidu Surla
- Molecular Endocrinology, Functional Genomics & Systems Biology, Laboratory Animal Biochemistry Division, ICAR- National Dairy Research Institute, Karnal, Haryana 132001, India
| | - Aparna Hebbar
- Molecular Endocrinology, Functional Genomics & Systems Biology, Laboratory Animal Biochemistry Division, ICAR- National Dairy Research Institute, Karnal, Haryana 132001, India
| | - Varun Kumar
- Molecular Endocrinology, Functional Genomics & Systems Biology, Laboratory Animal Biochemistry Division, ICAR- National Dairy Research Institute, Karnal, Haryana 132001, India
| | - Varij Nayan
- Molecular Endocrinology, Functional Genomics & Computational Biology, Laboratory Animal Physiology and Reproduction Division, ICAR-Central Institute for Research on Buffaloes, Hisar, 125001 Haryana, India
| | - Veerappa Gowdar Vedamurthy
- Molecular Endocrinology, Functional Genomics & Systems Biology, Laboratory Animal Biochemistry Division, ICAR- National Dairy Research Institute, Karnal, Haryana 132001, India
| | - Dheer Singh
- Molecular Endocrinology, Functional Genomics & Systems Biology, Laboratory Animal Biochemistry Division, ICAR- National Dairy Research Institute, Karnal, Haryana 132001, India
| | - Suneel Kumar Onteru
- Molecular Endocrinology, Functional Genomics & Systems Biology, Laboratory Animal Biochemistry Division, ICAR- National Dairy Research Institute, Karnal, Haryana 132001, India.
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