Factors influencing wild chimpanzee (Pan troglodytes verus) relative abundance in an agriculture-swamp matrix outside protected areas

Rare Long-Term Data Reveal the Seasonal Dietary Plasticity of Mandrills (Mandrillus sphinx) in Response to Fruiting Tree Phenology

Understanding primate dietary plasticity provides insights into trait evolution and resilience to environmental change. Here, we investigate the feeding ecology of mandrills (Mandrillus sphinx), a species that forms groups of close to 1000 individuals, which presumably impacts feeding ecology by creating exceptionally high feeding competition. Mandrills are also threatened by habitat loss and climate change, and a full understanding of their dietary plasticity is essential to ongoing conservation efforts. Evidence suggests that mandrills are generalist feeders and consume a wide variety of resources to compensate for shortfalls in fruit availability. However, a lack of long-term data on fruit production within the mandrill geographic range means that it is unknown whether the flexible feeding strategies observed previously are stable over multiple years. We combined two rare data sets comprising 8 years of fecal collection and fruit availability to assess the dietary flexibility of mandrills in Lopé National Park, Gabon. We found fruit to be the most frequently consumed resource and fruit consumption covaried positively with fruit availability, peaking during periods of fruit abundance. Mandrill dietary diversity increased during periods of fruit scarcity, through greater consumption of animal prey, leaves, seeds, and other plant fibers. These results demonstrate that mandrills are primarily frugivorous, but that they are also highly flexible feeders, able to respond to temporal variation in fruit production over several annual cycles. In addition, we found that mandrills varied in the extent to which they preferred different fruit taxa. Lipid-rich oil palm (Elaeis guineensis) fruits were by far the most frequently consumed resource and may constitute a staple resource for mandrills in the study site. Our multiyear study provides robust evidence for generalist feeding behavior by mandrills, which may be driven by extreme group sizes or past environmental fluctuations and provide resilience to future environmental change.

Running the Risk: Road-Crossing Behavior in Wild Chimpanzees (Pan troglodytes) in an Anthropogenic Habitat in Uganda

Recent research highlights the behavioral flexibility of wild chimpanzees in response to human-induced changes in their environment, including agricultural and infrastructural development. The expansion of road networks threatens chimpanzee populations across Africa. Studying their road-crossing behavior, especially outside protected areas where road impacts are greatest, helps identify factors influencing their choices and flexibility. This study seeks to gain a deeper understanding of how chimpanzees navigate busy roads and assess the danger posed by roads. Such insights are needed to develop effective conservation strategies in regions facing escalating human impact, including recommendations for the design and management of traffic on existing and future roads. Using a dataset of 129 video-recorded road crossings spanning 38 months, we analyzed the behavioral adjustments of chimpanzees in Bulindi, Uganda, when crossing a recently paved, busy main road within their home range. Using generalized linear mixed models, we investigated chimpanzee risk perception, protective and cooperative behaviors, vigilance, and progression order during road crossings. We identified variations in their behavior according to age-sex of individuals, group composition, and level of risk. We found that Bulindi chimpanzees exhibit behavioral strategies to reduce risks of collision or close encounters with humans on the road, as previously described. However, they were less vigilant than expected. We suggest that the chimpanzees have developed tolerance of the risks presented by the road, owing to their long history of crossing it before it was tarmacked and widened, and their familiarity with local people and motor traffic. Our results provide further evidence of the flexibility of wild chimpanzees. However, road crossings remain highly risky for large mammals like great apes, necessitating measures to mitigate the impact of road development on this and other endangered species (e.g. speed bumps, police enforcement, public awareness raising).

Capturing red squirrels (Sciurus vulgaris) on camera: A cost-effective approach for monitoring relative abundance and habitat preference

Effective methods for monitoring animal populations are crucial for species conservation and habitat management. Motion-activated cameras provide an affordable method for passively surveying animal presence across the landscape but have mainly been used for studying large-bodied mammals. This paper explores the relative abundance and habitat preferences of red squirrels (Sciurus vulgaris) in coniferous forests using cameras and live trapping. The study was conducted in two forests (Newborough and Pentraeth) on Anglesey, North Wales, with a total of 50 sampling locations across four habitat categories. Detailed woodland structure and composition data were gathered around each sampling location. We found a strong positive correlation between the number of individual red squirrels live trapped over 10 days with the number of camera images of squirrels recorded during a previous 5-day period. The time interval between camera deployment and the first recorded image of a red squirrel showed a significant negative correlation with the number of individuals live trapped. Red squirrel relative abundance was negatively related to forest canopy openness, while the presence of Scots pine and increased tree species diversity were positively associated with the relative abundance of squirrels. There was also a strong site difference with lower relative abundance at Newborough compared with Pentraeth, which likely reflects the heavy thinning of mature forest at Newborough reducing tree crown connectivity. The results show that remotely activated cameras are an effective method for monitoring red squirrel populations across varying animal densities. The cameras also provided crucial information on red squirrel habitat preferences that can aid in woodland management and conservation efforts. Cameras have great potential to collect data on the population status of other small mammals, but it is essential that these methods are validated on a species-by-species basis.

Reaffirming the Loma Mountains National Park in Sierra Leone as a critical site for the conservation of West African chimpanzee (Pan troglodytes verus)

The population of West African chimpanzees (Pan troglodytes verus) is declining rapidly mostly due to the impact of human activities and habitat loss. Sierra Leone harbors the third largest population of this subspecies, recently reclassified as Critically Endangered in the 2016 IUCN Red List. Population monitoring provides crucial data for planning and evaluating conservation and management policies. Therefore, to assess the status of the population size inhabiting the Loma Mountains National Park (LMNP) in Sierra Leone, we performed a nest count survey and estimated chimpanzee density and abundance using distance sampling. In total, 34 × 2-km-line transects were surveyed, with transects being systematically distributed across the LMNP area (288.5 km² ). Concurrently, we compiled environmental data, which were used to model nest distribution and infer the most relevant environmental and anthropogenic drivers of the observed nest abundances. We encountered 10.03 nests/km and estimated a density of 3.47 ± standard error (SE) 0.92 individuals/km² (i.e., 1002 ± SE 266 individuals in total). Compared to the figures obtained from a systematic literature review, our results suggest that the density and abundance of chimpanzees in the LMNP is among the highest across Africa. Contrary to expectation, no specific anthropogenic features predicted nest distribution and abundance. However, the nest distribution model indicated preference for elevated and steep areas covered by closed evergreen forest, which could be an indication of human avoidance. Based on these results, we highlight the value of LMNP for the conservation of the chimpanzees in Sierra Leone and the urgent necessity of guarantying long-term funding for this park's management to ensure the survival of this critically endangered subspecies in West Africa.

Mapping suitable habitat for Nigeria-Cameroon chimpanzees in Kom-Wum Forest Reserve, North-Western Cameroon

Great apes lose suitable habitats required for their reproduction and survival due to human activities across their distribution range in Africa. Little is known about habitat suitability of the Nigeria-Cameroon chimpanzee [Pan troglodytes ellioti (Matschie, 1914)], particularly for populations inhabiting forest reserves in North-West Cameroon. To address this knowledge gap, we employed a common species distribution model (MaxEnt) to map and predict suitable habitats for the Nigeria-Cameroon chimpanzee in Kom-Wum Forest Reserve, North-West Cameroon, based on environmental factors that potentially affect habitat suitability. We related these environmental factors to a dataset of chimpanzee occurrence points recorded during line transect and reconnaissance (recce) surveys in the forest reserve and surrounding forests.  Up to 91% of the study area is unsuitable for chimpanzees. Suitable habitats only represented 9% of the study area, with a high proportion of highly suitable habitats located outside the forest reserve. Elevation, secondary forests density, distance to villages and primary forests density were the most important predictors of habitat suitability for the Nigeria-Cameroon chimpanzee. The probability of chimpanzee occurrence increased with elevation, secondary forest density and distance from villages and roads. Our study provides evidence that suitable chimpanzee habitat in the reserve is degraded, suggesting that efforts to maintain protected areas are insufficient. The reserve management plan needs to be improved to conserve the remaining suitable habitat and to avoid local extinction of this endangered subspecies.

Interindividual differences in crop foraging behavior of chimpanzees (Pan troglodytes schweinfurthii) at a forest–agriculture interface

The expansion of agriculture in equatorial areas is fragmenting and reducing wildlife habitats. For primates, it also increases opportunities to consume crops as high-energy resources, exacerbates conflicts with farmers, and increases exposure to diseases and agrochemicals at the edge of protected areas. In species with sex differences in ranging behavior, individual exposure to such opportunities and threats may vary by sex. Chimpanzees show a great feeding flexibility and are territorial species with varied ranging patterns according to site, sex, or individuals. Within a community whose territory is crossed by a high-traffic road and partially bordered by maize gardens, we tested hypotheses of interindividual differences in access to crops based on age, sex, ranging behavior, and kinship. By analyzing the presence of Sebitoli chimpanzees (Pan troglodytes schweinfurthii, Kibale National Park, Uganda) on video clips from 16 camera traps, we estimated the individual dispersion range across the community’s territory and the crop foraging frequency along maize gardens over 16 months. While all age and sex classes were represented at the forest–garden interface, large intrasex differences were observed: some mature males and females were not observed to participate. The crop foraging frequency of adult females in maize gardens was significantly correlated with the location of their ranging areas. Related individuals revealed similar range patterns within the forest territory without sharing crop foraging habits. However, social learning and energy and risks–benefits trade-offs as potential drivers of crop consumption are not excluded.

Establishing the relationship between non-human primates and mangrove forests at the global, national, and local scales

Global and spatially explicit information about the interaction between habitat and wildlife species is critical to enhancing conservation efforts. Despite the recognized importance of mangrove forests to non-human primates, the relationship between the two lacks understanding. To counter this, we created the MangPrim-21 database to map and measure the locations of interactions between all non-human primates and all mangrove forests globally. We report our findings across the global, national, and local scales for all inventoried non-human primates and all inventoried mangrove forests. Globally, we find that half of all non-primates potentially use mangrove forests, and more than half of the global mangrove forest falls within the delineated range of at least one non-human primate species. Nationally, we find that Indonesia, Madagascar, Brazil, Cameroon, and Malaysia likely have the most non-human primate and mangrove forest interactions. At the subnational level, we find that several discrete locations in Kalimantan are critical to both mangrove forests and non-human primates. The MangPrim-21 database provides a globally consistent and locally applicable database of non-human primate and mangrove forest interactions. The results presented have broader implications for non-human primate and mangrove conservation and global actions to protect both. Additionally, our results raise questions about the idea that non-human primates primarily use mangrove forests as a refuge from human encroachment and habitat degradation.

“Engaging the Enemy”: Orangutan (Pongo pygmaeus morio) Conservation in Human Modified Environments in the Kinabatangan floodplain of Sabah, Malaysian Borneo

Throughout the equatorial tropics, forest conversion to agriculture often fragments crucial primate habitat. In 30 years, 80% of the alluvial lowland forests along the Kinabatangan River in Sabah, Malaysian Borneo, have been supplanted by oil palm (Elaeis guineensis) plantations. Today, only about 20% of the former orangutan (Pongo pygmaeus morio) population remains in the region. Because most of the land is now under the tenure of agribusiness companies, we used a pragmatic approach of mixed biosocial methods and citizen science engagement of oil palm growers (N = 6) as active conservation partners to study orangutan use of the privately administered landscape between protected forest fragments. We found that 22 of 25 remanent forest patches (0.5 to 242 hectares) surveyed within plantations contained food or shelter resources useful for orangutans. Of these, 20 are in regular transitory use by wider-ranging adult male orangutans, and in 9 patches, females are resident and raising offspring isolated within oil palm plantations. These findings indicate that orangutans retain a measure of normal metapopulation dynamics necessary for viability at the landscape level despite drastic habitat modification. We found that barriers to in situ conservation in these agroforest matrices were due to the following misconceptions across sectors: 1) Good farming practices require exclusion of wildlife; 2) Orangutans seen in plantations must be “rescued” by people; and 3) Translocation is an appropriate conservation strategy, and nondetrimental to orangutans. Our exploratory study exemplifies the value of biosocial methods and collaboration with industrial-scale farmers to support primate resilience in forests fragmented by agriculture.

Inter-community behavioural variation confirmed through indirect methods in four neighbouring chimpanzee communities in Cantanhez NP, Guinea-Bissau

Culture, while long viewed as exclusively human, has now been demonstrated across diverse taxa and contexts. However, most animal culture data are constrained to well-studied, habituated groups. This is the case for chimpanzees, arguably the most 'cultural' non-human species. While much progress has been made charting wild chimpanzees' cultural repertoire, large gaps remain in our knowledge of the majority of the continent's chimpanzees. Furthermore, few studies have compared neighbouring communities, despite such comparisons providing the strongest evidence for culture, and few have studied communities living in anthropogenic habitats although their culture is in imminent danger of disappearing. Here we combine direct, indirect and remote methods, including camera traps, to study, over 2 years, four unhabituated neighbouring chimpanzee communities inhabiting human-impacted habitats in Cantanhez NP, Guinea-Bissau. From traces collected during 1089 km of reconnaissance walks and 4197 videos from 56 camera trap locations, we identified 18 putative cultural traits. These included some noteworthy novel behaviours for these communities, and behaviours possibly new to the species. We created preliminary behavioural profiles for each community, and found inter-community differences spanning tool use, communication, and social behaviour, demonstrating the importance of comparing neighbouring communities and of studying previously neglected communities including those inhabiting anthropogenic landscapes.

Noninvasive Technologies for Primate Conservation in the 21st Century

Observing and quantifying primate behavior in the wild is challenging. Human presence affects primate behavior and habituation of new, especially terrestrial, individuals is a time-intensive process that carries with it ethical and health concerns, especially during the recent pandemic when primates are at even greater risk than usual. As a result, wildlife researchers, including primatologists, have increasingly turned to new technologies to answer questions and provide important data related to primate conservation. Tools and methods should be chosen carefully to maximize and improve the data that will be used to answer the research questions. We review here the role of four indirect methods—camera traps, acoustic monitoring, drones, and portable field labs—and improvements in machine learning that offer rapid, reliable means of combing through large datasets that these methods generate. We describe key applications and limitations of each tool in primate conservation, and where we anticipate primate conservation technology moving forward in the coming years.

An Investigation into the Influence of Different Types of Nesting Materials upon the Welfare of Captive Chimpanzees (Pan troglodytes)

Simple Summary

Presently, it is vital that captive chimpanzee populations are kept physically and mentally healthy, considering the number of individuals remaining in the wild continues to decrease. As such, we carried out this study to further understand how different types of nesting materials impact upon the welfare of captive chimpanzees living at Tacugama Chimpanzee Sanctuary (Sierra Leone). These nesting materials, including leaves and branches, long grass, cotton sheets, and shredded newspaper, served as a form of environmental enrichment—a strategy that is often adopted to enhance animals’ welfare. We found that the chimpanzees’ welfare was higher when nesting materials were present, compared to when they were absent, and that individuals favoured shredded newspaper. Our results reinforce the importance of supplying enrichments that are destructible, as these give individuals an increased sense of control, and simultaneously demonstrate that synthetic enrichment materials can be favoured over natural ones.

Abstract

Ensuring the welfare of captive chimpanzees (Pan troglodytes) is crucial, in part because they can act as a conservation resource in the case of wild populations becoming extinct. One strategy often adopted to ensure animal welfare is environmental enrichment. In this study, we investigated the impact of different nesting materials (leaves and branches, long grass, cotton sheets, and shredded newspaper) upon the welfare of chimpanzees housed at Tacugama Chimpanzee Sanctuary (Sierra Leone). Data was collected on 20 subjects (aged 4 to 15 years) between November 2019 and March 2020. Welfare was based on individuals’ relative frequency of affiliative, abnormal and agonistic behaviours, as well as their social and behavioural competence. We found that individuals’ welfare was higher when presented with nesting materials (compared to the control and post-treatment conditions), particularly when given shredded newspaper, regardless of whether the material was presented separately or in conjunction with another. In addition, welfare was highest: during the morning (vs evening); in groups of older individuals (vs younger); with females engaging in less agonistic behaviours compared to males; and males displaying relatively higher behavioural competence. Our results support previous research that captive chimpanzees be supplied with destructible nesting materials, and demonstrate that synthetic enrichments can indeed have a more positive impact upon welfare than their natural alternatives.

Cell-Mediated Immune Ontogeny Is Affected by Sex but Not Environmental Context in a Long-Lived Primate Species

Ecoimmunology conceptualizes the role of immunity in shaping life history in a natural context. Within ecoimmunology, macroimmunology is a framework that explains the effects of habitat and spatial differences on variation in immune phenotypes across populations. Within these frameworks, immune ontogeny—the development of the immune system across an individual life span—has received little attention. Here, we investigated how immune ontogeny from birth until adulthood is affected by age, sex, and developmental environment in a long-lived primate species, the bonobo. We found a progressive, significant decline of urinary neopterin levels, a marker for the cell-mediated immune response, from birth until 5 years of age in both sexes. The overall pattern of age-related neopterin changes was sex-specific, with males having higher urinary neopterin levels than females in the first 3 years of life, and females having higher levels than males between 6 and 8 years. Environmental condition (zoo-housed vs. wild) did not influence neopterin levels, nor did age-related changes in neopterin levels differ between environments. Our data suggest that the post-natal development of cell-mediated immune ontogeny is sex-specific but does not show plasticity in response to environmental conditions in this long-lived primate species. This indicates that cell-mediated immune ontogeny in the bonobo follows a stereotypic and maybe a genetically determined pattern that is not affected by environmental differences in pathogen exposure and energy availability, but that sex is an important, yet often overlooked factor shaping patterns of immune ontogeny. Investigating the causes and consequences of variation in immunity throughout life is critical for our understanding of life-history evolution and strategies, mechanisms of sexual selection, and population dynamics with respect to pathogen susceptibility. A general description of sex-specific immune ontogeny as done here is a crucial step in this direction, particularly when it is considered in the context of a species’ ecology and evolutionary history.

Chimpanzees balance resources and risk in an anthropogenic landscape of fear

Human-wildlife coexistence is possible when animals can meet their ecological requirements while managing human-induced risks. Understanding how wildlife balance these trade-offs in anthropogenic environments is crucial to develop effective strategies to reduce risks of negative interactions, including bi-directional aggression and disease transmission. For the first time, we use a landscape of fear framework with Bayesian spatiotemporal modelling to investigate anthropogenic risk-mitigation and optimal foraging trade-offs in Critically Endangered western chimpanzees (Pan troglodytes verus). Using 12 months of camera trap data (21 camera traps, 6722 camera trap days) and phenology on wild and cultivated plant species collected at Caiquene–Cadique, Cantanhez National Park (Guinea-Bissau), we show that humans and chimpanzees broadly overlapped in their use of forest and anthropogenic parts of the habitat including villages and cultivated areas. The spatiotemporal model showed that chimpanzee use of space was predicted by the availability of naturalised oil-palm fruit. Chimpanzees used areas away from villages and agriculture more intensively, but optimised their foraging strategies by increasing their use of village areas with cultivated fruits when wild fruits were scarce. Our modelling approach generates fine-resolution space–time output maps, which can be scaled-up to identify human-wildlife interaction hotspots at the landscape level, informing coexistence strategy.

Anthropogenic disturbance and chimpanzee (Pan troglodytes) habitat use in the Masito-Ugalla Ecosystem, Tanzania

The habitat quality of chimpanzee (Pan troglodytes), including the availability of plant food and nesting species, is important to ensure the long-term survival of this endangered species. Botanical composition of vegetation is spatially variable and depends on soil characteristics, weather, topography, and numerous other biotic and abiotic factors. There are few data regarding the availability of chimpanzee plant food and nesting species in the Masito-Ugalla Ecosystem (MUE), a vast area that lies outside national park boundaries in Tanzania, and how the availability of these resources varies with human disturbance. We hypothesized that chimpanzee plant food species richness, diversity, and abundance decline with increasing human disturbance. Further, we predicted that chimpanzee abundance and habitat use is influenced negatively by human disturbance. Published literature from Issa Valley, Gombe, and Mahale Mountains National Parks, in Tanzania, was used to document plant species consumed by chimpanzees, and quantify their richness, diversity, and abundance, along 32 transects totaling 63.8 km in length across four sites of varying human disturbance in MUE. We documented 102 chimpanzee plant food species and found a significant differences in their species richness (H = 55.09, P < 0.001) and diversity (H = 36.81, P < 0.001) across disturbance levels, with the moderately disturbed site exhibiting the highest species richness and diversity. Chimpanzees built nests in 17 different tree species. The abundance of nesting tree species did not vary across survey sites (H = 0.279, P > 0.964). The least disturbed site exhibited the highest encounter rate of chimpanzee nests/km, with rates declining toward the highly disturbed sites. Our results show that severe anthropogenic disturbance in MUE is associated with the loss of chimpanzee plant food species and negatively influences chimpanzee habitat use, a relationship that threatens the future of all chimpanzee populations outside national parks.

The macronutrient composition of wild and cultivated plant foods of West African chimpanzees (Pan troglodytes verus) inhabiting an anthropogenic landscape

Agricultural expansion encroaches on tropical forests and primates in such landscapes frequently incorporate crops into their diet. Understanding the nutritional drivers behind crop-foraging can help inform conservation efforts to improve human-primate coexistence. This study builds on existing knowledge of primate diets in anthropogenic landscapes by estimating the macronutrient content of 24 wild and 11 cultivated foods (90.5% of food intake) consumed by chimpanzees (Pan troglodytes verus) at Bossou, Guinea, West Africa. We also compared the macronutrient composition of Bossou crops to published macronutrient measures of crops from Bulindi, Uganda, East Africa. The composition of wild fruits, leaves, and pith were consistent with previous reports for primate diets. Cultivated fruits were higher in carbohydrates and lower in insoluble fiber than wild fruits, while wild fruits were higher in protein. Macronutrient content of cultivated pith fell within the ranges of consumed wild pith. Oil palm food parts were relatively rich in carbohydrates, protein, lipids, and/or fermentable fiber, adding support for the nutritional importance of the oil palm for West African chimpanzees. We found no differences in the composition of cultivated fruits between Bossou and Bulindi, suggesting that macronutrient content alone does not explain differences in crop selection. Our results build on the current understanding of chimpanzee feeding ecology within forest-agricultural mosaics and provide additional support for the assumption that crops offer primates energetic benefits over wild foods.

Forest fragments become farmland: Dietary Response of wild chimpanzees (Pan troglodytes) to fast-changing anthropogenic landscapes

Behavioral flexibility, including an ability to modify feeding behavior, is a key trait enabling primates to survive in forest fragments. In human-dominated landscapes, unprotected forest fragments can become progressively degraded, and may be cleared entirely, challenging the capacity of primates to adjust to the changes. We examined responses of wild chimpanzees (Pan troglodytes schweinfurthii) to major habitat change: that is, clearance of forest fragments for agriculture. Over 7 years, fragments in Bulindi, Uganda, were reduced in size by 80%. We compared the chimpanzees' diet at the start and end of this period of rapid deforestation, using data derived mainly from fecal analysis. Similar to other long-term study populations, chimpanzees in Bulindi have a diverse diet comprising over 169 plant foods. However, extensive deforestation seemed to impact their feeding ecology. Dietary changes after fragment clearance included reduced overall frugivory, reduced intake of figs (Ficus spp.; formerly a dietary "staple" for these chimpanzees), and reduced variety of fruits in fecal samples. Nevertheless, the magnitude of most changes was remarkably minor given the extent of forest loss. Agricultural fruits increased in dietary importance, with crops accounting for a greater proportion of fruits in fecal samples after deforestation. In particular, cultivated jackfruit (Artocarpus heterophyllus) became a "staple" food for the chimpanzees but was scarcely eaten before fragment clearance. Crops offer some nutritional benefits for primates, being high in carbohydrate energy and low in hard-to-digest fiber. Thus, crop feeding may have offset foraging costs associated with loss of wild foods and reduced overall frugivory for the chimpanzees. The adaptability of many primates offers hope for their conservation in fragmented, rural landscapes. However, long-term data are needed to establish whether potential benefits (i.e. energetic, reproductive) of foraging in agricultural matrix habitats outweigh fitness costs from anthropogenic mortality risk for chimpanzees and other adaptable primates.