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Garcia-Jacas N, López-Pujol J, Nualart N, Herrando-Moraira S, Romaschenko K, Ren MX, Susanna A. Centaurea Subsect. Phalolepis (Compositae, Cardueae): A Case Study of Mountain-Driven Allopatric Speciation in the Mediterranean Peninsulas. PLANTS (BASEL, SWITZERLAND) 2022; 12:11. [PMID: 36616140 PMCID: PMC9823864 DOI: 10.3390/plants12010011] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 10/20/2022] [Revised: 12/02/2022] [Accepted: 12/14/2022] [Indexed: 06/17/2023]
Abstract
Centaurea subsection Phalolepis has been thoroughly analyzed in previous studies using microsatellites in four centers of speciation: Anatolia, Greece, the Italian Peninsula and the Iberian Peninsula. Evidence suggests a correlation between taxon diversity and mountains. This group constituted a good case study for examining the mountain-geobiodiversity hypothesis (MGH), which explains the possible reasons for the many radiations occurring in mountains across the world. We combined all the datasets and carried out analyses of their genetic structure to confirm the species of subsect. Phalolepis are grouped according to a geographic pattern. We then checked whether climatic fluctuations favored the "species pump" hypothesis in the mountains by using the Climatic Stability Index (CSI). Finally, the relief of the terrain was tested against the rate of allopatric speciation by region by means of Terrain Ruggedness Index and environmental gradients through our new Climate Niche Breadth Index. Our results supported the MGH hypothesis and confirmed that the main triggers, namely altitudinal zonation, climatic oscillations and rugged terrain, must be present for the development of a radiation.
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Affiliation(s)
- Núria Garcia-Jacas
- Botanic Institute of Barcelona (IBB, CSIC-Ajuntament de Barcelona), Pg. Migdia, s/n, 08038 Barcelona, Spain
| | - Jordi López-Pujol
- Botanic Institute of Barcelona (IBB, CSIC-Ajuntament de Barcelona), Pg. Migdia, s/n, 08038 Barcelona, Spain
- Escuela de Ciencias Ambientales, Universidad Espíritu Santo (UEES), Samborondón 091650, Ecuador
| | - Neus Nualart
- Botanic Institute of Barcelona (IBB, CSIC-Ajuntament de Barcelona), Pg. Migdia, s/n, 08038 Barcelona, Spain
| | - Sonia Herrando-Moraira
- Botanic Institute of Barcelona (IBB, CSIC-Ajuntament de Barcelona), Pg. Migdia, s/n, 08038 Barcelona, Spain
| | - Konstantin Romaschenko
- Department of Botany, National Museum of Natural History, Smithsonian Institution, Washington, DC 20013-7012, USA
- M.G. Kholodny Institute of Botany, National Academy of Sciences of Ukraine, 01601 Kyiv, Ukraine
| | - Ming-Xun Ren
- Key Laboratory of Genetics and Germplasm Innovation of Tropical Special Forest Trees and Ornamental Plants (Hainan University), Ministry of Education, Haikou 570228, China
- Center for Terrestrial Biodiversity of the South China Sea, Hainan University, Haikou 570228, China
| | - Alfonso Susanna
- Botanic Institute of Barcelona (IBB, CSIC-Ajuntament de Barcelona), Pg. Migdia, s/n, 08038 Barcelona, Spain
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Bozkurt M, Calleja Alarcón JA, Uysal T, Garcia-Jacas N, Ertuğrul K, Susanna A. Biogeography of Rhaponticoides, an Irano-Turanian element in the Mediterranean flora. Sci Rep 2022; 12:22019. [PMID: 36539442 PMCID: PMC9768164 DOI: 10.1038/s41598-022-24947-3] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/25/2022] [Accepted: 11/22/2022] [Indexed: 12/24/2022] Open
Abstract
Floristic relationships between the Irano-Turanian and Mediterranean regions have been known from old. However, only a few biogeographical analyses based on molecular data have evaluated the history of steppe plants within the Mediterranean basin. Our study aims to contribute to a better understanding of the migratory and diversification processes by reconstructing the biogeography of Rhaponticoides (Cardueae), distributed in the Mediterranean and Irano-Turanian regions. We generated nuclear and plastid sequences that were analyzed by Bayesian inference. We used the resulting phylogeny for dating the diversification of the genus and examining the dispersal pathways. Two clades were recovered, an Irano-Turanian clade and a Mediterranean clade. The origin of the genus was placed in the Anatolian plateau in the Middle Miocene. The genus experienced several diversifications and expansions correlated to the Messinian salinity crisis and the environmental changes in the Pliocene and the Quaternary. Rhaponticoides migrated following two routes reflecting the two souls of the genus: Irano-Turanian taxa colonized the steppes of Eurasia whilst Mediterranean species migrated via eastern and central Mediterranean and North Africa, leaving a trail of species; both pathways ended in the Iberian Peninsula. Our study also confirms that more work is needed to unravel phylogenetic relationships in Rhaponticoides.
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Affiliation(s)
- Meryem Bozkurt
- Department of Biology, Faculty of Science, Selçuk University, 42130, Konya, Turkey
| | - Juan Antonio Calleja Alarcón
- Departament of Biology (Botany), Faculty of Sciences, Research Centre on Biodiversity and Global Change (CIBC-UAM), 28049, Madrid, Spain.
| | - Tuna Uysal
- Department of Biology, Faculty of Science, Selçuk University, 42130, Konya, Turkey
| | - Nuria Garcia-Jacas
- Botanic Institute of Barcelona (IBB, CSIC-Ajuntament de Barcelona), Pg. del Migdia, S.N., 08038, Barcelona, Spain
| | - Kuddisi Ertuğrul
- Department of Biology, Faculty of Science, Selçuk University, 42130, Konya, Turkey
| | - Alfonso Susanna
- Botanic Institute of Barcelona (IBB, CSIC-Ajuntament de Barcelona), Pg. del Migdia, S.N., 08038, Barcelona, Spain
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Fois M, Farris E, Calvia G, Campus G, Fenu G, Porceddu M, Bacchetta G. The Endemic Vascular Flora of Sardinia: A Dynamic Checklist with an Overview of Biogeography and Conservation Status. PLANTS (BASEL, SWITZERLAND) 2022; 11:plants11050601. [PMID: 35270071 PMCID: PMC8912449 DOI: 10.3390/plants11050601] [Citation(s) in RCA: 5] [Impact Index Per Article: 1.7] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 02/03/2022] [Revised: 02/17/2022] [Accepted: 02/21/2022] [Indexed: 06/01/2023]
Abstract
The vascular flora of Sardinia has been investigated for more than 250 years, with particular attention to the endemic component due to their phylogeographic and conservation interest. However, continuous changes in the floristic composition through natural processes, anthropogenic drivers or modified taxonomical attributions require constant updating. We checked all available literature, web sources, field, and unpublished data from the authors and acknowledged external experts to compile an updated checklist of vascular plants endemic to Sardinia. Life and chorological forms as well as the conservation status of the updated taxa list were reported. Sardinia hosts 341 taxa (15% of the total native flora) endemic to the Tyrrhenian Islands and other limited continental territories; 195 of these (8% of the total native flora) are exclusive to Sardinia. Asteraceae (50 taxa) and Plumbaginaceae (42 taxa) are the most representative families, while the most frequent life forms are hemicryptophytes (118 taxa) and chamaephytes (106 taxa). The global conservation status, available for 201 taxa, indicates that most endemics are under the 'Critically Endangered' (25 taxa), 'Endangered' (31 taxa), or 'Least Concern' (90 taxa) IUCN categories. This research provides an updated basis for future biosystematics, taxonomic, biogeographical, and ecological studies and in supporting more integrated and efficient policy tools.
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Affiliation(s)
- Mauro Fois
- Centre for the Conservation of Biodiversity (CCB), Department of Life and Environmental Sciences, University of Cagliari, Viale S. Ignazio da Laconi 11-13, 09123 Cagliari, Italy; (M.F.); (G.C.); (G.F.); (M.P.); (G.B.)
| | - Emmanuele Farris
- Department of Chemistry and Farmacy, University of Sassari, Via Piandanna 4, 07100 Sassari, Italy
| | - Giacomo Calvia
- Centre for the Conservation of Biodiversity (CCB), Department of Life and Environmental Sciences, University of Cagliari, Viale S. Ignazio da Laconi 11-13, 09123 Cagliari, Italy; (M.F.); (G.C.); (G.F.); (M.P.); (G.B.)
| | - Giuliano Campus
- Independent Researcher, Via G. Rossini 69, 09045 Quartu Sant’Elena, Italy;
| | - Giuseppe Fenu
- Centre for the Conservation of Biodiversity (CCB), Department of Life and Environmental Sciences, University of Cagliari, Viale S. Ignazio da Laconi 11-13, 09123 Cagliari, Italy; (M.F.); (G.C.); (G.F.); (M.P.); (G.B.)
| | - Marco Porceddu
- Centre for the Conservation of Biodiversity (CCB), Department of Life and Environmental Sciences, University of Cagliari, Viale S. Ignazio da Laconi 11-13, 09123 Cagliari, Italy; (M.F.); (G.C.); (G.F.); (M.P.); (G.B.)
- Sardinian Germplasm Bank (BG-SAR), Hortus Botanicus Karalitanus (HBK), University of Cagliari, Viale S. Ignazio da Laconi, 9-11, 09123 Cagliari, Italy
| | - Gianluigi Bacchetta
- Centre for the Conservation of Biodiversity (CCB), Department of Life and Environmental Sciences, University of Cagliari, Viale S. Ignazio da Laconi 11-13, 09123 Cagliari, Italy; (M.F.); (G.C.); (G.F.); (M.P.); (G.B.)
- Sardinian Germplasm Bank (BG-SAR), Hortus Botanicus Karalitanus (HBK), University of Cagliari, Viale S. Ignazio da Laconi, 9-11, 09123 Cagliari, Italy
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Atia MAM, El-Moneim DA, Abdelmoneim TK, Reda EH, Shakour ZTA, El-Halawany AM, El-Kashoury ESA, Shams KA, Abdel-Azim NS, Hegazy MEF. Evaluation of genetic variability and relatedness among eight Centaurea species through CAAT-box derived polymorphism (CBDP) and start codon targeted polymorphism (SCoT) markers. BIOTECHNOL BIOTEC EQ 2021. [DOI: 10.1080/13102818.2021.1960891] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/28/2023] Open
Affiliation(s)
- Mohamed Atia Mohamed Atia
- Genome Mapping Department, Agricultural Genetic Engineering Research Institute (AGERI), Agricultural Research Center (ARC), Giza, Egypt
| | - Diaa Abd El-Moneim
- Department of Plant Production (Genetic Branch), Faculty of Environmental and Agricultural Sciences, Arish University, Arish, Egypt
| | - Taghreed Khaled Abdelmoneim
- Genome Mapping Department, Agricultural Genetic Engineering Research Institute (AGERI), Agricultural Research Center (ARC), Giza, Egypt
| | - Eman Hussein Reda
- Phytochemistry Laboratory, National Organization for Drug Control and Research, Giza, Egypt
| | | | | | | | - Khaled Ahmed Shams
- Chemistry of Medicinal Plants Department, National Research Centre, Giza, Egypt
| | | | - Mohamed-Elamir Fathy Hegazy
- Chemistry of Medicinal Plants Department, National Research Centre, Giza, Egypt
- Department of Pharmaceutical Biology, Institute of Pharmaceutical and Biomedical Sciences, Johannes Gutenberg University, Mainz, Germany
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Importance of Plants with Extremely Small Populations (PSESPs) in Endemic-Rich Areas, Elements Often Forgotten in Conservation Strategies. PLANTS 2021; 10:plants10081504. [PMID: 34451549 PMCID: PMC8400471 DOI: 10.3390/plants10081504] [Citation(s) in RCA: 10] [Impact Index Per Article: 2.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 06/09/2021] [Revised: 07/14/2021] [Accepted: 07/18/2021] [Indexed: 12/17/2022]
Abstract
The distribution of the threatened fern Ophioglossum vulgatum L., a plant with extremely small populations (PSESPs) in Sardinia, is characterized by small disjunct populations with only a few individuals, and little is known about its status in the wild. To provide information for the conservation of O. vulgatum and with the aim to develop an in situ conservation strategy, we investigated its distribution, population size, and habitat. Field surveys confirmed that the species grows in only five localities. Two representative populations were selected for this study (Funtanamela and Gedili), and in each population, all plants were mapped and monitored monthly from April to August over an 8-year period. During the study, the populations had a very low number of reproductive plants and the populations appeared to be in decline, with the total number of plants per population slightly decreased in Gedili while a sharp reduction was recorded in Funtanamela due to wild boar threat. A fence was built in order to protect the site from further damage, but no noticeable signals of recovery were observed. The most urgent conservation requirement for this species is to preserve the threatened habitat of the remnant populations. Further field surveys and research are also required for an improved understanding of the species’ status.
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Meudt HM, Albach DC, Tanentzap AJ, Igea J, Newmarch SC, Brandt AJ, Lee WG, Tate JA. Polyploidy on Islands: Its Emergence and Importance for Diversification. FRONTIERS IN PLANT SCIENCE 2021; 12:637214. [PMID: 33763097 PMCID: PMC7982887 DOI: 10.3389/fpls.2021.637214] [Citation(s) in RCA: 17] [Impact Index Per Article: 4.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 12/03/2020] [Accepted: 02/11/2021] [Indexed: 05/31/2023]
Abstract
Whole genome duplication or polyploidy is widespread among floras globally, but traditionally has been thought to have played a minor role in the evolution of island biodiversity, based on the low proportion of polyploid taxa present. We investigate five island systems (Juan Fernández, Galápagos, Canary Islands, Hawaiian Islands, and New Zealand) to test whether polyploidy (i) enhances or hinders diversification on islands and (ii) is an intrinsic feature of a lineage or an attribute that emerges in island environments. These island systems are diverse in their origins, geographic and latitudinal distributions, levels of plant species endemism (37% in the Galapagos to 88% in the Hawaiian Islands), and ploidy levels, and taken together are representative of islands more generally. We compiled data for vascular plants and summarized information for each genus on each island system, including the total number of species (native and endemic), generic endemicity, chromosome numbers, genome size, and ploidy levels. Dated phylogenies were used to infer lineage age, number of colonization events, and change in ploidy level relative to the non-island sister lineage. Using phylogenetic path analysis, we then tested how the diversification of endemic lineages varied with the direct and indirect effects of polyploidy (presence of polyploidy, time on island, polyploidization near colonization, colonizer pool size) and other lineage traits not associated with polyploidy (time on island, colonizer pool size, repeat colonization). Diploid and tetraploid were the most common ploidy levels across all islands, with the highest ploidy levels (>8x) recorded for the Canary Islands (12x) and New Zealand (20x). Overall, we found that endemic diversification of our focal island floras was shaped by polyploidy in many cases and certainly others still to be detected considering the lack of data in many lineages. Polyploid speciation on the islands was enhanced by a larger source of potential congeneric colonists and a change in ploidy level compared to overseas sister taxa.
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Affiliation(s)
- Heidi M Meudt
- Museum of New Zealand Te Papa Tongarewa, Wellington, New Zealand
| | - Dirk C Albach
- Institute of Biology and Environmental Sciences, University of Oldenburg, Oldenburg, Germany
| | - Andrew J Tanentzap
- Ecosystems and Global Change Group, Department of Plant Sciences, University of Cambridge, Cambridge, United Kingdom
| | - Javier Igea
- Ecosystems and Global Change Group, Department of Plant Sciences, University of Cambridge, Cambridge, United Kingdom
| | - Sophie C Newmarch
- School of Fundamental Sciences, Massey University, Palmerston North, New Zealand
| | | | - William G Lee
- Manaaki Whenua - Landcare Research, Dunedin, New Zealand
| | - Jennifer A Tate
- School of Fundamental Sciences, Massey University, Palmerston North, New Zealand
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