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For: Adamo M, Voyron S, Chialva M, Marmeisse R, Girlanda M. Metabarcoding on both environmental DNA and RNA highlights differences between fungal communities sampled in different habitats. PLoS One 2020;15:e0244682. [PMID: 33378355 DOI: 10.1371/journal.pone.0244682] [Citation(s) in RCA: 8] [Impact Index Per Article: 1.6] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/04/2020] [Accepted: 12/14/2020] [Indexed: 12/14/2022]  Open
Number Cited by Other Article(s)
1
Qiao L, Wu Y, Ren C, Li T, Guo Y, Zhao A. Benthic foraminiferal community structure and its response to heavy metals revealed using environmental DNA/RNA metabarcoding in Yueqing Bay, East China Sea. MARINE POLLUTION BULLETIN 2025;217:118126. [PMID: 40347747 DOI: 10.1016/j.marpolbul.2025.118126] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 01/20/2025] [Revised: 04/18/2025] [Accepted: 05/06/2025] [Indexed: 05/14/2025]
2
Gómez-Martínez D, Selvin MA, Nilsson AK, Carmona E, Ngou JS, Kristiansson E, Nilsson RH, Corcoll N. Environmental concentrations of the fungicide tebuconazole alter microbial biodiversity and trigger biofilm-released transformation products. CHEMOSPHERE 2024;369:143854. [PMID: 39615850 DOI: 10.1016/j.chemosphere.2024.143854] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 05/20/2024] [Revised: 10/13/2024] [Accepted: 11/27/2024] [Indexed: 12/07/2024]
3
Hatano Y, Matsuoka S, Doi H, Tateno R, Hasegawa M, Osono T. Evaluation of the persistence of Epichloë endophyte and its possible effect on fungal assemblages in dead leaf sheaths. Fungal Biol 2024;128:2325-2332. [PMID: 39643400 DOI: 10.1016/j.funbio.2024.11.008] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/05/2024] [Revised: 10/31/2024] [Accepted: 11/13/2024] [Indexed: 12/09/2024]
4
Jackson VLN, Grevesse T, Kilias ES, Onda DFL, Young KF, Allen MJ, Walsh DA, Lovejoy C, Monier A. Vulnerability of Arctic Ocean microbial eukaryotes to sea ice loss. Sci Rep 2024;14:28896. [PMID: 39572565 PMCID: PMC11582671 DOI: 10.1038/s41598-024-77821-9] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/20/2024] [Accepted: 10/25/2024] [Indexed: 11/24/2024]  Open
5
Muvunyi CM, Ngabonziza JCS, Florence M, Mukagatare I, Twagirumukiza M, Ahmed A, Siddig EE. Diversity and Distribution of Fungal Infections in Rwanda: High Risk and Gaps in Knowledge, Policy, and Interventions. J Fungi (Basel) 2024;10:658. [PMID: 39330417 PMCID: PMC11433616 DOI: 10.3390/jof10090658] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/08/2024] [Revised: 09/11/2024] [Accepted: 09/12/2024] [Indexed: 09/28/2024]  Open
6
Zhang Y, Qiu Y, Liu K, Zhong W, Yang J, Altermatt F, Zhang X. Evaluating eDNA and eRNA metabarcoding for aquatic biodiversity assessment: From bacteria to vertebrates. ENVIRONMENTAL SCIENCE AND ECOTECHNOLOGY 2024;21:100441. [PMID: 39027464 PMCID: PMC11254946 DOI: 10.1016/j.ese.2024.100441] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 12/18/2023] [Revised: 06/10/2024] [Accepted: 06/10/2024] [Indexed: 07/20/2024]
7
Mamadashvili G, Brin A, Chumak M, Diedus V, Drössler L, Förster B, Georgiev KB, Ghrejyan T, Hleb R, Kalashian M, Kamburov I, Karagyan G, Kevlishvili J, Khutsishvili Z, Larrieu L, Mazmanyan M, Petrov PI, Tabunidze L, Bässler C, Müller J. Drivers of wood-inhabiting fungal diversity in European and Oriental beech forests. Ecol Evol 2024;14:e11660. [PMID: 38962025 PMCID: PMC11220834 DOI: 10.1002/ece3.11660] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/22/2024] [Revised: 05/26/2024] [Accepted: 06/13/2024] [Indexed: 07/05/2024]  Open
8
Rishan ST, Kline RJ, Rahman MS. New prospects of environmental RNA metabarcoding research in biological diversity, ecotoxicological monitoring, and detection of COVID-19: a critical review. ENVIRONMENTAL SCIENCE AND POLLUTION RESEARCH INTERNATIONAL 2024;31:11406-11427. [PMID: 38183542 DOI: 10.1007/s11356-023-31776-y] [Citation(s) in RCA: 1] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 10/11/2023] [Accepted: 12/26/2023] [Indexed: 01/08/2024]
9
Grishkan I, Kidron GJ, Rodriguez-Berbel N, Miralles I, Ortega R. Altitudinal Gradient and Soil Depth as Sources of Variations in Fungal Communities Revealed by Culture-Dependent and Culture-Independent Methods in the Negev Desert, Israel. Microorganisms 2023;11:1761. [PMID: 37512933 PMCID: PMC10383159 DOI: 10.3390/microorganisms11071761] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/08/2023] [Revised: 07/03/2023] [Accepted: 07/04/2023] [Indexed: 07/30/2023]  Open
10
Environmental DNA (eDNA): Powerful Technique for Biodiversity Conservation. J Nat Conserv 2022. [DOI: 10.1016/j.jnc.2022.126325] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/29/2022]
11
Neidel V, Sint D, Wallinger C, Traugott M. RNA allows identifying the consumption of carrion prey. Mol Ecol Resour 2022;22:2662-2671. [PMID: 35668675 PMCID: PMC9541938 DOI: 10.1111/1755-0998.13659] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/15/2021] [Revised: 05/05/2022] [Accepted: 05/17/2022] [Indexed: 11/30/2022]
12
Baeshen M, Alkaladi A, Alhejen A, Bataweel N, Abdelkader H, Suliman abuzahrah S. Exploring the Taxonomic and Functional Diversity of Marine Benthic Micro-Eukaryotes Along the Red Sea Coast of Jeddah City. Saudi J Biol Sci 2022;29:103342. [PMID: 35846388 PMCID: PMC9278075 DOI: 10.1016/j.sjbs.2022.103342] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/15/2021] [Revised: 05/07/2022] [Accepted: 06/10/2022] [Indexed: 11/16/2022]  Open
13
Adamo M, Comtet-Marre S, Büttner E, Kellner H, Luis P, Vallon L, Prego R, Hofrichter M, Girlanda M, Peyret P, Marmeisse R. Fungal dye-decolorizing peroxidase diversity: roles in either intra- or extracellular processes. Appl Microbiol Biotechnol 2022;106:2993-3007. [PMID: 35435459 PMCID: PMC9064869 DOI: 10.1007/s00253-022-11923-0] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/28/2022] [Revised: 04/06/2022] [Accepted: 04/08/2022] [Indexed: 01/13/2023]
14
Forecasting the number of species of asexually reproducing fungi (Ascomycota and Basidiomycota). FUNGAL DIVERS 2022. [DOI: 10.1007/s13225-022-00500-5] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/30/2022]
15
Caboň M, Galvánek D, Detheridge AP, Griffith GW, Maráková S, Adamčík S. Mulching has negative impact on fungal and plant diversity in Slovak oligotrophic grasslands. Basic Appl Ecol 2021. [DOI: 10.1016/j.baae.2021.02.007] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/22/2022]
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