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Liu X, Ji J, Zhang X, Chen Z, He L, Wang C. Microbial Remediation of Crude Oil in Saline Conditions by Oil-Degrading Bacterium Priestia megaterium FDU301. Appl Biochem Biotechnol 2024; 196:2694-2712. [PMID: 36399308 DOI: 10.1007/s12010-022-04245-4] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Accepted: 11/08/2022] [Indexed: 11/19/2022]
Abstract
Salinity greatly affects the microbial degradation process of crude oil; thus, the isolation and identification of halotolerant microbes is essential. Limited studies explored how microbes respond to increased salinity. In this study, an oil-degrading bacterium Priestia megaterium FDU301 was isolated from the Dagang oil field, which can tolerate a salinity of 6%. Compared to the non-saline condition, oil degradation ratios by P. megaterium FDU301 increased by 15.27% and 11.26% in 0.5% and 3.5% salinity media, respectively. Meanwhile, bacteria degraded various components of crude oil more thoroughly in saline environments, especially mid-chain hydrocarbons (C11-C18). Surface tension under salt stress was lower than that in the non-saline medium, indicating that the amount of biosurfactants produced by bacteria was increased. The microbial activity enhanced markedly in response to increased salinity, which was the main factor for the high degradation ability. As a vital component of biofilms, the production of polysaccharides was accelerated with P. megaterium FDU301 inoculation in saline environments. These results indicate that P. megaterium FDU301 has great potential application in oil bioremediation in saline environments.
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Affiliation(s)
- Xiaoyan Liu
- Laboratory of Environmental Remediation, College of Environmental and Chemical Engineering, Shanghai University, 99 Shangda Road, Shanghai, 200444, China
| | - Jinghao Ji
- Laboratory of Environmental Remediation, College of Environmental and Chemical Engineering, Shanghai University, 99 Shangda Road, Shanghai, 200444, China
| | - Xinying Zhang
- Laboratory of Environmental Remediation, College of Environmental and Chemical Engineering, Shanghai University, 99 Shangda Road, Shanghai, 200444, China.
| | - Zongze Chen
- Laboratory of Environmental Remediation, College of Environmental and Chemical Engineering, Shanghai University, 99 Shangda Road, Shanghai, 200444, China
| | - Lihong He
- Laboratory of Environmental Remediation, College of Environmental and Chemical Engineering, Shanghai University, 99 Shangda Road, Shanghai, 200444, China
| | - Chuanhua Wang
- College of Life and Environmental Science, Wenzhou University, Wenzhou, 325035, Zhejiang, China
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Bhadra S, Chettri D, Kumar Verma A. Biosurfactants: Secondary Metabolites Involved in the Process of Bioremediation and Biofilm Removal. Appl Biochem Biotechnol 2023; 195:5541-5567. [PMID: 35579742 DOI: 10.1007/s12010-022-03951-3] [Citation(s) in RCA: 7] [Impact Index Per Article: 7.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/03/2022] [Accepted: 05/02/2022] [Indexed: 12/24/2022]
Abstract
The search for environmentally friendly methods to remove persistent substances such as organic pollutants and sessile communities such as biofilms that severely affect the environment and human health resulted in biosurfactant discovery. Owing to their low level of toxicity and high biodegradability, biosurfactants are increasingly preferred to be used for removal of pollutants from nature. These amphipathic molecules can be synthesized inexpensively, employing cheap substrates such as agricultural and industrial wastes. Recent progress has been made in identifying various biosurfactants that can be used to remove organic pollutants and harmful microbial aggregates, as well as novel microbial strains that produce these surface-active molecules to survive in a hydrocarbon-rich environment. This review focuses on the identification and understanding the role of biosurfactants and the microorganisms involved in the removal of biofilms and remediation of xenobiotics and various types of hydrocarbons such as crude oil, aromatic hydrocarbons, n-alkanes, aliphatic hydrocarbons, asphaltenes, naphthenes, and other petroleum products. This property of biosurfactant is very important as biofilms are of great concern due to their impact on the environment, public health, and industries worldwide. This work also includes several advanced molecular methods that can be used to enhance the production of biosurfactants by the microorganisms studied.
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Affiliation(s)
- Sushruta Bhadra
- Department of Microbiology, Sikkim University, Gangtok, 737102, Sikkim, India
| | - Dixita Chettri
- Department of Microbiology, Sikkim University, Gangtok, 737102, Sikkim, India
| | - Anil Kumar Verma
- Department of Microbiology, Sikkim University, Gangtok, 737102, Sikkim, India.
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Adiandri RS, Purwadi R, Hoerudin H, Setiadi T. Evaluation of Biosurfactant Production by Bacillus Species Using Glucose and Xylose as Carbon Sources. Curr Microbiol 2023; 80:250. [PMID: 37347358 DOI: 10.1007/s00284-023-03345-6] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Grants] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/26/2022] [Accepted: 05/25/2023] [Indexed: 06/23/2023]
Abstract
Lignocellulosic material is one of the raw materials that can be used to reduce the cost of biosurfactant production because it is cheap, abundantly available, and contains cellulose and hemicellulose which can be hydrolyzed to glucose and xylose as carbon sources. This study aimed to evaluate biosurfactant production by Bacillus species using glucose and xylose as carbon sources, which are the most abundant sugar monomers from the hydrolysis of lignocellulosic materials. In this study, biosurfactants were produced by six bacterial isolates belonging to the Bacillus genus. The six bacterial isolates were identified molecularly through 16S rRNA sequencing. The results showed that the six bacterial isolates were identified as B. subtilis ITBCC46, B. subtilis ITBCC40, B. subtilis ITBCC31, B. siamensis ITBCC36, B. xiamenensis ITBCC43, and B. subtilis ITBCC30. All Bacillus species used in this study could be grown on glucose or xylose media. Biosurfactants produced by B. subtilis ITBCC46, B. subtilis ITBCC40, B. subtilis ITBCC31, and B. siamensis ITBCC36 could reduce surface tension below 40 mN/m (32.70 to 39.15 mN/m). All biosurfactants produced by these Bacillus species had more than 50% emulsification stability. These characteristics indicated that the biosurfactants had the desired quality.
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Affiliation(s)
- Resa Setia Adiandri
- Department of Chemical Engineering, Faculty of Industrial Technology, Institut Teknologi Bandung, Jalan Ganesha No. 10, Bandung, West Java, 40132, Indonesia
- Indonesian Center for Agricultural Postharvest Research and Development, Indonesian Agency for Agricultural Research and Development, Bogor, 16124, Indonesia
| | - Ronny Purwadi
- Department of Chemical Engineering, Faculty of Industrial Technology, Institut Teknologi Bandung, Jalan Ganesha No. 10, Bandung, West Java, 40132, Indonesia
- Food Engineering Department, Institut Teknologi Bandung, Jatinangor Campus, Sumedang, 45363, Indonesia
| | - Hoerudin Hoerudin
- Indonesian Center for Agricultural Postharvest Research and Development, Indonesian Agency for Agricultural Research and Development, Bogor, 16124, Indonesia
| | - Tjandra Setiadi
- Department of Chemical Engineering, Faculty of Industrial Technology, Institut Teknologi Bandung, Jalan Ganesha No. 10, Bandung, West Java, 40132, Indonesia.
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Siddiqui Z, Grohmann E, Malik A. Degradation of alkane hydrocarbons by Priestia megaterium ZS16 and sediments consortia with special reference to toxicity and oxidative stress induced by the sediments in the vicinity of an oil refinery. CHEMOSPHERE 2023; 317:137886. [PMID: 36657569 DOI: 10.1016/j.chemosphere.2023.137886] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 10/16/2022] [Revised: 01/13/2023] [Accepted: 01/14/2023] [Indexed: 06/17/2023]
Abstract
Petroleum hydrocarbon is a critical ecological issue with impact on ecosystems through bioaccumulation. It poses significant risks to human health. Due to the extent of alkane hydrocarbon pollution in some environments, biosurfactants are considered as a new multifunctional technology for the efficient removal of petroleum-based contaminants. To this end, Yamuna river sediments were collected at different sites in the vicinity of Mathura oil refinery, UP (India). They were analysed by atomic absorption spectrophotometry and gas chromatography-mass spectrometry (GC-MS) for heavy metals and organic pollutants. Heptadecane, nonadecane, oleic acid ester and phthalic acid were detected. In total 107 bacteria were isolated from the sediments and screened for biosurfactant production. The most efficient biosurfactant producing strain was tested for its capability to degrade hexadecane efficiently at different time intervals (0 h, 7 d, 14 d and 21 d). FT-IR analysis defined the biosurfactant as lipopeptide. 16S rRNA gene sequencing identified the bacterium as Priestia megaterium. The strain lacks resistance to common antibiotics thus making it an important candidate for remediation. The microbial consortia present in the sediments were also investigated for their capability to degrade C16, C17 and C18 alkane hydrocarbons. By using gas chromatography-mass spectrophotometry the metabolites were identified as 1-docosanol, dodecanoic acid, 7-hexadecenal, (Z)-, hexadecanoic acid, docosanoic acid, 1-hexacosanal, 9-octadecenoic acid, 3-octanone, Z,Z-6,28-heptatriactontadien-2-one, heptacosyl pentafluoropropionate, 1,30-triacontanediol and decyl octadecyl ester. Oxidative stress in Vigna radiata L. roots was observed by using Confocal Laser Scanning Microscopy. A strong reduction in seed germination and radicle and plumule length was observed when Vigna radiata L. was treated with different concentrations of sediment extracts, possibly due to the toxic effects of the pollutants in the river sediments. Thus, this study is significant since it considers the toxicological effects of hydrocarbons and to degrade them in an environmentally friendly manner.
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Affiliation(s)
- Zarreena Siddiqui
- Department of Agricultural Microbiology, Faculty of Agricultural Sciences, Aligarh Muslim University, Aligarh, 202002, India
| | - Elisabeth Grohmann
- Berliner Hochschule für Technik, Faculty of Life Sciences and Technology, Seestraße 64, 13347, Berlin, Germany
| | - Abdul Malik
- Department of Agricultural Microbiology, Faculty of Agricultural Sciences, Aligarh Muslim University, Aligarh, 202002, India.
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Valizadeh S, Enayatizamir N, Ghomsheh HN, Motamedi H, Moghadam BK. Characterization of the biosurfactant production and enzymatic potential of bacteria isolated from an oil-contaminated saline soil. INTERNATIONAL MICROBIOLOGY : THE OFFICIAL JOURNAL OF THE SPANISH SOCIETY FOR MICROBIOLOGY 2023:10.1007/s10123-022-00318-w. [PMID: 36680696 DOI: 10.1007/s10123-022-00318-w] [Citation(s) in RCA: 1] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 08/16/2022] [Revised: 12/16/2022] [Accepted: 12/29/2022] [Indexed: 01/22/2023]
Abstract
Biosurfactants are amphiphilic compounds with extensive applications in oily contaminated environments to remove hydrocarbons. Moreover, enzymes such as laccase and manganese peroxidase are responsible for the oxidation of a variety of phenolic compounds and aromatic amines. Therefore, in the present study, bacteria with the potential to produce biosurfactants and enzymes (namely, laccase, manganese peroxidase, and endoglucanase carboxymethyl cellulose (CMCase)) were isolated from petroleum oil-contaminated soil. From 15 isolated bacteria, three isolates were selected as the best producers of biosurfactants according to the related tests, such as tests for surface tension reduction. These three bacteria indicated tolerance to a salinity test and were classified as resistant and very resistant. The isolates 3, 12, 13, and 14 showed positive results for the degradation of guaiacol, phenol red, and carboxymethylcellulose, as well as the decoloration of methylene blue by the creation of a clear halo around the bacterial colony. Upon the quantitation of the laccase and manganese peroxidase activities, 22.58 U/L and 21.81 U/L, respectively, were measured by isolate 13. Furthermore, CMCase activity was recorded with 0.057436 U/ml belonging to isolate 14. Bacterial strains with appreciable laccase, peroxidase, CMCase activity, and biosurfactant production potentials were identified through 16S rDNA sequence analysis as Bacillus sp. (isolate 3), Bacillus toyonensis (isolate 12), Bacillus cereus (isolate 13), and Bacillus tropicus (isolate 14), and their nucleotide sequences were deposited in the GenBank. The potentials for the industrial applicability of the biosurfactants and enzymes abound, and production needs to be optimized by the selected bacterial strains.
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Affiliation(s)
- Sara Valizadeh
- Department of Soil Science, Agricultural Sciences and Natural Resources University of Khuzestan, Mollasani, Iran
| | - Naeimeh Enayatizamir
- Department of Soil Science, Faculty of Agriculture, Shahid Chamran University of Ahvaz, Ahvaz, Iran.
| | - Habibolah Nadian Ghomsheh
- Department of Soil Science, Agricultural Sciences and Natural Resources University of Khuzestan, Mollasani, Iran
| | - Hossein Motamedi
- Department of Biology, Faculty of Science, Shahid Chamran University of Ahvaz, Ahvaz, Iran.,Biotechnology and Biological Science Research Center, Shahid Chamran University of Ahvaz, Ahvaz, Iran
| | - Bijan Khalili Moghadam
- Department of Soil Science, Agricultural Sciences and Natural Resources University of Khuzestan, Mollasani, Iran
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A Genomic Analysis of Bacillus megaterium HT517 Reveals the Genetic Basis of Its Abilities to Promote Growth and Control Disease in Greenhouse Tomato. Int J Genomics 2022; 2022:2093029. [PMID: 36605453 PMCID: PMC9810399 DOI: 10.1155/2022/2093029] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/16/2022] [Revised: 12/05/2022] [Accepted: 12/09/2022] [Indexed: 12/29/2022] Open
Abstract
Bacillus megaterium is well known as a plant growth-promoting rhizobacterium, but the relevant molecular mechanisms remain unclear. This study aimed to elucidate the effects of B. megaterium HT517 on the growth and development of and the control of disease in greenhouse tomato and its mechanism of action. A pot experiment was conducted to determine the effect of B. megaterium on tomato growth, and this experiment included the HT517 group (3.2 × 108 cfu/pot) and the control group (inoculated with the same amount of sterilized suspension). An antagonistic experiment and a plate confrontation experiment were conducted to study the antagonistic effect of B. megaterium and Fusarium oxysporum f.sp. lycopersici. Liquid chromatography-mass spectrometry was used to determine the metabolite composition and metabolic pathway of HT517. PacBio+Illumina HiSeq sequencing was utilized for map sequencing of the samples. An in-depth analysis of the functional genes related to the secretion of these substances by functional bacteria was conducted. HT517 could secrete organic acids that solubilize phosphorus, promote root growth, secrete auxin, which that promotes early flowering and fruiting, and alkaloids, which control disease, and reduce the incidence of crown rot by 51.0%. The complete genome sequence indicated that the strain comprised one circular chromosome with a length of 5,510,339 bp (including four plasmids in the genome), and the GC content accounted for 37.95%. Seven genes (pyk, aceB, pyc, ackA, gltA, buk, and aroK) related to phosphate solubilization, five genes (trpA, trpB, trpS, TDO2, and idi) related to growth promotion, eight genes (hpaB, pheS, pheT, ileS, pepA, iucD, paaG, and kamA) related to disease control, and one gene cluster of synthetic surfactin were identified in this research. The identification of molecular biological mechanisms for extracellular secretion by the HT517 strain clarified that its organic acids solubilized phosphorus, that auxin promoted growth, and that alkaloids controlled tomato diseases.
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Profiling of Indigenous Biosurfactant-Producing Bacillus Isolates in the Bioremediation of Soil Contaminated by Petroleum Products and Olive Oil. Int J Microbiol 2021; 2021:9565930. [PMID: 34567125 PMCID: PMC8463192 DOI: 10.1155/2021/9565930] [Citation(s) in RCA: 3] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/29/2021] [Revised: 07/18/2021] [Accepted: 08/30/2021] [Indexed: 12/17/2022] Open
Abstract
Petroleum is, up to this date, an inimitable nonrenewable energy resource. Petroleum leakage, which arises during transport, storage, and refining, is the most important contaminant in the environment, as it produces harm to the surrounding ecosystem. Bioremediation is an efficient method used to treat petroleum hydrocarbon-contaminated soil using indigenous microorganisms. The degradation characteristics for a variety of hydrocarbons (hexane, benzene, gasoline, and diesel) were qualitatively and quantitatively investigated using Bacillus isolates. Microbiological and biochemical methods have been used including isolation of oil-degrading bacteria, enzymatic activities, the determination of physicochemical parameters, biosurfactant production and extraction assay, oil displacement assay, antimicrobial assay of the biosurfactants, and bioremediation kinetics. Consequently, of the 60 isolates capable of degrading different hydrocarbons at fast rates, 34 were suspected to be Bacillus isolates capable of growing in 24 h or 48 h on BH medium supplemented with 2% of hexane, benzene, gasoline, diesel, and olive oil, respectively. Among the 34 isolates, 61% (21/34) are capable of producing biosurfactant-like molecules by using gasoline, 70% (24/34) with diesel oil, 85% (29/34) with hexane, and 82% (28/34) with benzene. It was found that biosurfactant-producing isolates are extractable with HCl (100%), ammonium sulphate (95%), chloroform (95%), and ethanol (100%). Biosurfactants showed stability at 20°C, 37°C, 40°C, and 60°C. Biosurfactant secreted by Bacillus strains has shown an antagonistic effect in Escherichia coli, Shigella flexneri 5a M90T, and Bacillus cereus. The selected isolates could therefore be safely used for biodegradation. Substrate biodegradation patterns by individual isolates were found to significantly differ. The study shows that benzene was degraded faster, followed by hexane, gasoline, and finally diesel. The Bacillus consortium used can decrease hydrocarbon content from 195 to 112 (g/kg) in 15 days.
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