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Agostini A, Calcinoni A, Petrova AA, Bortolus M, Casazza AP, Carbonera D, Santabarbara S. An unusual triplet population pathway in the Reaction Centre of the Chlorophyll-d binding Photosystem I of A. marina, as revealed by a combination of TR-EPR and ODMR spectroscopies. BIOCHIMICA ET BIOPHYSICA ACTA. BIOENERGETICS 2025; 1866:149515. [PMID: 39349288 DOI: 10.1016/j.bbabio.2024.149515] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 05/02/2024] [Revised: 09/03/2024] [Accepted: 09/23/2024] [Indexed: 10/02/2024]
Abstract
Photo-induced Chlorophyll (Chl) triplet states in the isolated Photosystem I (PSI) of Acaryochloris marina, that harbours Chl d as its main pigment, were investigated by Optically Detected Magnetic Resonance (ODMR) and Time-Resolved Electron Paramagnetic Resonance (TR-EPR), and as a function of pre-illumination of the sample under reducing redox poising. Fluorescence Detected Magnetic Resonance (FDMR) allowed resolving four Chl d triplet (3Chl d) populations (T1-T4) both in untreated and illuminated samples in the presence of ascorbate and N,N,N',N'-tetramethyl-p-phenylenediamine (TMPD). The FDMR signals increased following the pre-illumination treatment, particularly for the T3 and T4 populations, which are therefore sensitive to the redox state of PSI cofactors. Microwave-induced Triplet minus Singlet (TmS) spectra were detected in the |D|-|E| resonance window of the T3 and T4 triplets. These showed a broad singlet bleaching centred at 740 nm and also displayed complex spectral structure with several derivative-like features, indicating that both the T3 and T43Chl d populations are associated with the PSI reaction centre (RC) triplet, P3740. Parallel measurements by TR-EPR demonstrated that triplet signals observed under all conditions investigated are dominated by an electron spin polarisation (esp), which is typical of intersystem crossing, differently from what expected for recombination triplet states formed from a radical pair precursor. Moreover, stronger reductant conditions obtained by pre-illumination of the samples in the presence of dithionite and 5-methylphenazinium methyl sulfate (PMS) did not lead to a recombination triplet state esp, but rather to a decrease of the whole signal intensity. The energetics of A. marina PSI and the possible occurrence of distributions of cofactors redox properties are discussed in order to address the unexpected P3740 esp.
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Affiliation(s)
- Alessandro Agostini
- Department of Chemical Sciences, Università di Padova, Via Marzolo 1, 35131 Padova, Italy
| | - Andrea Calcinoni
- Department of Chemical Sciences, Università di Padova, Via Marzolo 1, 35131 Padova, Italy
| | - Anastasia A Petrova
- Photosynthesis Research Unit, Centro Studi sulla Biologia Cellulare e Molecolare delle Piante, Consiglio Nazionale delle Ricerche, Via Celoria 26, 20133 Milano, Italy; A. N. Belozersky Institute of Physical-Chemical Biology, Lomonosov Moscow State University, 119992 Leninskye Gory 1 building, 40 Moscow, Russia
| | - Marco Bortolus
- Department of Chemical Sciences, Università di Padova, Via Marzolo 1, 35131 Padova, Italy
| | - Anna Paola Casazza
- Istituto di Biologia e Biotecnologia Agraria, Consiglio Nazionale delle Ricerche, Via A. Corti 12, 20133 Milano, Italy
| | - Donatella Carbonera
- Department of Chemical Sciences, Università di Padova, Via Marzolo 1, 35131 Padova, Italy.
| | - Stefano Santabarbara
- Photosynthesis Research Unit, Centro Studi sulla Biologia Cellulare e Molecolare delle Piante, Consiglio Nazionale delle Ricerche, Via Celoria 26, 20133 Milano, Italy; Istituto di Biologia e Biotecnologia Agraria, Consiglio Nazionale delle Ricerche, Via A. Corti 12, 20133 Milano, Italy.
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2
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Cherepanov DA, Petrova AA, Fadeeva MS, Gostev FE, Shelaev IV, Nadtochenko VA, Semenov AY. Specificity of Photochemical Energy Conversion in Photosystem I from the Green Microalga Chlorella ohadii. BIOCHEMISTRY. BIOKHIMIIA 2024; 89:1133-1145. [PMID: 38981706 DOI: 10.1134/s0006297924060129] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 03/30/2024] [Revised: 04/23/2024] [Accepted: 04/24/2024] [Indexed: 07/11/2024]
Abstract
Primary excitation energy transfer and charge separation in photosystem I (PSI) from the extremophile desert green alga Chlorella ohadii grown in low light were studied using broadband femtosecond pump-probe spectroscopy in the spectral range from 400 to 850 nm and in the time range from 50 fs to 500 ps. Photochemical reactions were induced by the excitation into the blue and red edges of the chlorophyll Qy absorption band and compared with similar processes in PSI from the cyanobacterium Synechocystis sp. PCC 6803. When PSI from C. ohadii was excited at 660 nm, the processes of energy redistribution in the light-harvesting antenna complex were observed within a time interval of up to 25 ps, while formation of the stable radical ion pair P700+A1- was kinetically heterogeneous with characteristic times of 25 and 120 ps. When PSI was excited into the red edge of the Qy band at 715 nm, primary charge separation reactions occurred within the time range of 7 ps in half of the complexes. In the remaining complexes, formation of the radical ion pair P700+A1- was limited by the energy transfer and occurred with a characteristic time of 70 ps. Similar photochemical reactions in PSI from Synechocystis 6803 were significantly faster: upon excitation at 680 nm, formation of the primary radical ion pairs occurred with a time of 3 ps in ~30% complexes. Excitation at 720 nm resulted in kinetically unresolvable ultrafast primary charge separation in 50% complexes, and subsequent formation of P700+A1- was observed within 25 ps. The photodynamics of PSI from C. ohadii was noticeably similar to the excitation energy transfer and charge separation in PSI from the microalga Chlamydomonas reinhardtii; however, the dynamics of energy transfer in C. ohadii PSI also included slower components.
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Affiliation(s)
- Dmitry A Cherepanov
- Semenov Federal Research Center for Chemical Physics, Russian Academy of Sciences, Moscow, 119991, Russia.
- Belozersky Research Institute of Physico-Chemical Biology, Lomonosov Moscow State University, Moscow, 119992, Russia
| | - Anastasiya A Petrova
- Belozersky Research Institute of Physico-Chemical Biology, Lomonosov Moscow State University, Moscow, 119992, Russia
| | - Mariya S Fadeeva
- The George S. Wise Faculty of Life Sciences, Tel Aviv University, Tel Aviv, 69978, Israel
| | - Fedor E Gostev
- Semenov Federal Research Center for Chemical Physics, Russian Academy of Sciences, Moscow, 119991, Russia
| | - Ivan V Shelaev
- Semenov Federal Research Center for Chemical Physics, Russian Academy of Sciences, Moscow, 119991, Russia
| | - Victor A Nadtochenko
- Semenov Federal Research Center for Chemical Physics, Russian Academy of Sciences, Moscow, 119991, Russia
- Faculty of Chemistry, Lomonosov Moscow State University, Moscow, 119991, Russia
| | - Alexey Yu Semenov
- Semenov Federal Research Center for Chemical Physics, Russian Academy of Sciences, Moscow, 119991, Russia.
- Belozersky Research Institute of Physico-Chemical Biology, Lomonosov Moscow State University, Moscow, 119992, Russia
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3
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Kirpich JS, Luo L, Nelson MR, Agarwala N, Xu W, Hastings G. Is the A -1 Pigment in Photosystem I Part of P700? A (P700 +-P700) FTIR Difference Spectroscopy Study of A -1 Mutants. Int J Mol Sci 2024; 25:4839. [PMID: 38732056 PMCID: PMC11084411 DOI: 10.3390/ijms25094839] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/03/2024] [Revised: 04/24/2024] [Accepted: 04/25/2024] [Indexed: 05/13/2024] Open
Abstract
The involvement of the second pair of chlorophylls, termed A-1A and A-1B, in light-induced electron transfer in photosystem I (PSI) is currently debated. Asparagines at PsaA600 and PsaB582 are involved in coordinating the A-1B and A-1A pigments, respectively. Here we have mutated these asparagine residues to methionine in two single mutants and a double mutant in PSI from Synechocystis sp. PCC 6803, which we term NA600M, NB582M, and NA600M/NB582M mutants. (P700+-P700) FTIR difference spectra (DS) at 293 K were obtained for the wild-type and the three mutant PSI samples. The wild-type and mutant FTIR DS differ considerably. This difference indicates that the observed changes in the (P700+-P700) FTIR DS cannot be due to only the PA and PB pigments of P700. Comparison of the wild-type and mutant FTIR DS allows the assignment of different features to both A-1 pigments in the FTIR DS for wild-type PSI and assesses how these features shift upon cation formation and upon mutation. While the exact role the A-1 pigments play in the species we call P700 is unclear, we demonstrate that the vibrational modes of the A-1A and A-1B pigments are modified upon P700+ formation. Previously, we showed that the A-1 pigments contribute to P700 in green algae. In this manuscript, we demonstrate that this is also the case in cyanobacterial PSI. The nature of the mutation-induced changes in algal and cyanobacterial PSI is similar and can be considered within the same framework, suggesting a universality in the nature of P700 in different photosynthetic organisms.
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Affiliation(s)
- Julia S. Kirpich
- Department of Physics and Astronomy, Georgia State University, Atlanta, GA 30303, USA
| | - Lujun Luo
- Department of Chemistry, University of Louisiana at Lafayette, Lafayette, LA 70504, USA
| | - Michael R. Nelson
- Department of Physics and Astronomy, Georgia State University, Atlanta, GA 30303, USA
| | - Neva Agarwala
- Department of Physics and Astronomy, Georgia State University, Atlanta, GA 30303, USA
| | - Wu Xu
- Department of Chemistry, University of Louisiana at Lafayette, Lafayette, LA 70504, USA
| | - Gary Hastings
- Department of Physics and Astronomy, Georgia State University, Atlanta, GA 30303, USA
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4
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van Stokkum IHM, Müller MG, Holzwarth AR. Energy Transfer and Radical-Pair Dynamics in Photosystem I with Different Red Chlorophyll a Pigments. Int J Mol Sci 2024; 25:4125. [PMID: 38612934 PMCID: PMC11012434 DOI: 10.3390/ijms25074125] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/11/2024] [Revised: 04/03/2024] [Accepted: 04/06/2024] [Indexed: 04/14/2024] Open
Abstract
We establish a general kinetic scheme for the energy transfer and radical-pair dynamics in photosystem I (PSI) of Chlamydomonas reinhardtii, Synechocystis PCC6803, Thermosynechococcus elongatus and Spirulina platensis grown under white-light conditions. With the help of simultaneous target analysis of transient-absorption data sets measured with two selective excitations, we resolved the spectral and kinetic properties of the different species present in PSI. WL-PSI can be described as a Bulk Chl a in equilibrium with a higher-energy Chl a, one or two Red Chl a and a reaction-center compartment (WL-RC). Three radical pairs (RPs) have been resolved with very similar properties in the four model organisms. The charge separation is virtually irreversible with a rate of ≈900 ns-1. The second rate, of RP1 → RP2, ranges from 70-90 ns-1 and the third rate, of RP2 → RP3, is ≈30 ns-1. Since RP1 and the Red Chl a are simultaneously present, resolving the RP1 properties is challenging. In Chlamydomonas reinhardtii, the excited WL-RC and Bulk Chl a compartments equilibrate with a lifetime of ≈0.28 ps, whereas the Red and the Bulk Chl a compartments equilibrate with a lifetime of ≈2.65 ps. We present a description of the thermodynamic properties of the model organisms at room temperature.
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Affiliation(s)
- Ivo H. M. van Stokkum
- Department of Physics and Astronomy and LaserLaB, Faculty of Science, Vrije Universiteit Amsterdam, De Boelelaan 1081, 1081 HV Amsterdam, The Netherlands;
| | - Marc G. Müller
- Max-Planck-Institut für Chemische Energiekonversion, D-45470 Mülheim a.d. Ruhr, Germany;
| | - Alfred R. Holzwarth
- Department of Physics and Astronomy and LaserLaB, Faculty of Science, Vrije Universiteit Amsterdam, De Boelelaan 1081, 1081 HV Amsterdam, The Netherlands;
- Max-Planck-Institut für Chemische Energiekonversion, D-45470 Mülheim a.d. Ruhr, Germany;
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5
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Fleitas AG, Sardar S, Arnould-Pétré MM, Murace M, Vignolini S, Brodie J, Lanzani G, D'Andrea C. Influence of structural colour on the photoprotective mechanism in the gametophyte phase of the red alga Chondrus crispus. J R Soc Interface 2024; 21:20230676. [PMID: 38378137 PMCID: PMC10878799 DOI: 10.1098/rsif.2023.0676] [Citation(s) in RCA: 3] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/17/2023] [Accepted: 01/26/2024] [Indexed: 02/22/2024] Open
Abstract
Marine life is populated by a huge diversity of organisms with an incredible range of colour. While structural colour mechanisms and functions are usually well studied in marine animal species, there is a huge knowledge gap regarding the marine macroalgae (red, green and brown seaweeds) that have structural coloration and the biological significance of this phenomenon in these photosynthetic organisms. Here we show that structural colour in the gametophyte life history phase of the red alga Chondrus crispus plays an important role as a photoprotective mechanism in synergy with the other pigments present. In particular, we have demonstrated that blue structural coloration attenuates the more energetic light while simultaneously favouring green and red light harvesting through the external antennae (phycobilisomes) which possess an intensity-dependent photoprotection mechanism. These insights into the relationship between structural colour and photosynthetic light management further our understanding of the mechanisms involved.
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Affiliation(s)
- Ariel García Fleitas
- Center for Nano Science and Technology, Istituto Italiano di Tecnologia, Via Rubattino 81, 20134 Milano, Italy
- Dipartimento di Fisica, Politecnico di Milano, Piazza L. da Vinci 32, 20133 Milano, Italy
| | - Samim Sardar
- Center for Nano Science and Technology, Istituto Italiano di Tecnologia, Via Rubattino 81, 20134 Milano, Italy
| | | | - Maria Murace
- Department of Chemistry, University of Cambridge, Lensfield Road, Cambridge CB2 1EW, UK
| | - Silvia Vignolini
- Department of Chemistry, University of Cambridge, Lensfield Road, Cambridge CB2 1EW, UK
| | - Juliet Brodie
- Natural History Museum, Science, Cromwell Road, London SW7 5BD, UK
| | - Guglielmo Lanzani
- Center for Nano Science and Technology, Istituto Italiano di Tecnologia, Via Rubattino 81, 20134 Milano, Italy
- Dipartimento di Fisica, Politecnico di Milano, Piazza L. da Vinci 32, 20133 Milano, Italy
| | - Cosimo D'Andrea
- Center for Nano Science and Technology, Istituto Italiano di Tecnologia, Via Rubattino 81, 20134 Milano, Italy
- Dipartimento di Fisica, Politecnico di Milano, Piazza L. da Vinci 32, 20133 Milano, Italy
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van Stokkum IH, Müller MG, Weißenborn J, Weigand S, Snellenburg JJ, Holzwarth AR. Energy transfer and trapping in photosystem I with and without chlorophyll- f. iScience 2023; 26:107650. [PMID: 37680463 PMCID: PMC10480676 DOI: 10.1016/j.isci.2023.107650] [Citation(s) in RCA: 7] [Impact Index Per Article: 3.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/08/2023] [Revised: 06/14/2023] [Accepted: 08/11/2023] [Indexed: 09/09/2023] Open
Abstract
We establish a general kinetic scheme for energy transfer and trapping in the photosystem I (PSI) of cyanobacteria grown under white light (WL) or far-red light (FRL) conditions. With the help of simultaneous target analysis of all emission and transient absorption datasets measured in five cyanobacterial strains, we resolved the spectral and kinetic properties of the different species present in PSI. WL-PSI can be described by Bulk Chl a, two Red Chl a, and a reaction center compartment (WL-RC). The FRL-PSI contains two additional Chl f compartments. The lowest excited state of the FRL-RC is downshifted by ≈ 29 nm. The rate of charge separation drops from ≈900 ns-1 in WL-RC to ≈300 ns-1 in FRL-RC. The delayed trapping in the FRL-PSI (≈130 ps) is explained by uphill energy transfer from the Chl f compartments with Gibbs free energies of ≈kBT below that of the FRL-RC.
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Affiliation(s)
- Ivo H.M. van Stokkum
- Department of Physics and Astronomy and LaserLaB, Faculty of Science, Vrije Universiteit Amsterdam, De Boelelaan 1081, Amsterdam 1081 HV, the Netherlands
| | - Marc G. Müller
- Max-Planck-Institut für chemische Energiekonversion, 45470 Mülheim a.d. Ruhr, Germany
| | - Jörn Weißenborn
- Department of Physics and Astronomy and LaserLaB, Faculty of Science, Vrije Universiteit Amsterdam, De Boelelaan 1081, Amsterdam 1081 HV, the Netherlands
| | - Sebastian Weigand
- Department of Physics and Astronomy and LaserLaB, Faculty of Science, Vrije Universiteit Amsterdam, De Boelelaan 1081, Amsterdam 1081 HV, the Netherlands
| | - Joris J. Snellenburg
- Department of Physics and Astronomy and LaserLaB, Faculty of Science, Vrije Universiteit Amsterdam, De Boelelaan 1081, Amsterdam 1081 HV, the Netherlands
| | - Alfred R. Holzwarth
- Department of Physics and Astronomy and LaserLaB, Faculty of Science, Vrije Universiteit Amsterdam, De Boelelaan 1081, Amsterdam 1081 HV, the Netherlands
- Max-Planck-Institut für chemische Energiekonversion, 45470 Mülheim a.d. Ruhr, Germany
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7
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Niedzwiedzki DM, Magdaong NCM, Su X, Adir N, Keren N, Liu H. Mass spectrometry and spectroscopic characterization of a tetrameric photosystem I supercomplex from Leptolyngbya ohadii, a desiccation-tolerant cyanobacterium. BIOCHIMICA ET BIOPHYSICA ACTA. BIOENERGETICS 2023; 1864:148955. [PMID: 36708912 DOI: 10.1016/j.bbabio.2023.148955] [Citation(s) in RCA: 2] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 10/26/2022] [Revised: 01/06/2023] [Accepted: 01/20/2023] [Indexed: 01/26/2023]
Abstract
Cyanobacteria inhabiting desert biological soil crusts face the harsh conditions of the desert. They evolved a suite of strategies toward desiccation-hydration cycles mixed with high light irradiations, etc. In this study we purified and characterized the structure and function of Photosystem I (PSI) from Leptolyngbya ohadii, a desiccation-tolerant desert cyanobacterium. We discovered that PSI forms tetrameric (PSI-Tet) aggregate. We investigated it by using sucrose density gradient centrifugation, clear native PAGE, high performance liquid chromatography, mass spectrometry (MS), time-resolved fluorescence (TRF) and time-resolved transient absorption (TA) spectroscopy. MS analysis identified the presence of two PsaB and two PsaL proteins in PSI-Tet and uniquely revealed that PsaLs are N-terminally acetylated in contrast to non-modified PsaL in the trimeric PSI from Synechocystis sp. PCC 6803. Chlorophyll (Chl) a fluorescence decay profiles of the PSI-Tet performed at 77 K revealed two emission bands at ∼690 nm and 725 nm with the former appearing only at early delay time. The main fluorescence emission peak, associated with emission from the low energy Chls a, decays within a few nanoseconds. TA studies demonstrated that the 725 nm emission band is associated with low energy Chls a with absorption band clearly resolved at ∼710 nm at 77 K. In summary, our work suggests that the heterogenous composition of PsaBs and PsaL in PSI-Tet is related with the adaptation mechanisms needed to cope with stressful conditions under which this bacterium naturally grows.
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Affiliation(s)
- Dariusz M Niedzwiedzki
- Center for Solar Energy and Energy Storage, Washington University in St. Louis, St. Louis, MO 63130, USA; Department of Energy Environmental and Chemical Engineering, Washington University in St. Louis, St. Louis, MO 63130, USA.
| | | | - Xinyang Su
- Department of Biology, Washington University in St. Louis, St. Louis, MO 63130, USA
| | - Noam Adir
- Schulich Faculty of Chemistry, Technion, Israel Institute of Technology, Hafai, Israel
| | - Nir Keren
- Department of Plant & Environmental Sciences, The Alexander Silberman Institute of Life Sciences, The Hebrew University of Jerusalem, Israel
| | - Haijun Liu
- Department of Biology, Washington University in St. Louis, St. Louis, MO 63130, USA.
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8
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Zhang S, Zou B, Cao P, Su X, Xie F, Pan X, Li M. Structural insights into photosynthetic cyclic electron transport. MOLECULAR PLANT 2023; 16:187-205. [PMID: 36540023 DOI: 10.1016/j.molp.2022.12.014] [Citation(s) in RCA: 15] [Impact Index Per Article: 7.5] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 11/01/2022] [Revised: 12/17/2022] [Accepted: 12/18/2022] [Indexed: 06/17/2023]
Abstract
During photosynthesis, light energy is utilized to drive sophisticated biochemical chains of electron transfers, converting solar energy into chemical energy that feeds most life on earth. Cyclic electron transfer/flow (CET/CEF) plays an essential role in efficient photosynthesis, as it balances the ATP/NADPH ratio required in various regulatory and metabolic pathways. Photosystem I, cytochrome b6f, and NADH dehydrogenase (NDH) are large multisubunit protein complexes embedded in the thylakoid membrane of the chloroplast and key players in NDH-dependent CEF pathway. Furthermore, small mobile electron carriers serve as shuttles for electrons between these membrane protein complexes. Efficient electron transfer requires transient interactions between these electron donors and acceptors. Structural biology has been a powerful tool to advance our knowledge of this important biological process. A number of structures of the membrane-embedded complexes, soluble electron carrier proteins, and transient complexes composed of both have now been determined. These structural data reveal detailed interacting patterns of these electron donor-acceptor pairs, thus allowing us to visualize the different parts of the electron transfer process. This review summarizes the current state of structural knowledge of three membrane complexes and their interaction patterns with mobile electron carrier proteins.
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Affiliation(s)
- Shumeng Zhang
- National Laboratory of Biomacromolecules, CAS Center for Excellence in Biomacromolecules, Institute of Biophysics, Chinese Academy of Sciences, Beijing, China
| | - Baohua Zou
- National Laboratory of Biomacromolecules, CAS Center for Excellence in Biomacromolecules, Institute of Biophysics, Chinese Academy of Sciences, Beijing, China; University of Chinese Academy of Sciences, Beijing, China
| | - Peng Cao
- Faculty of Environment and Life, Beijing University of Technology, Beijing, China
| | - Xiaodong Su
- National Laboratory of Biomacromolecules, CAS Center for Excellence in Biomacromolecules, Institute of Biophysics, Chinese Academy of Sciences, Beijing, China; University of Chinese Academy of Sciences, Beijing, China
| | - Fen Xie
- National Laboratory of Biomacromolecules, CAS Center for Excellence in Biomacromolecules, Institute of Biophysics, Chinese Academy of Sciences, Beijing, China; University of Chinese Academy of Sciences, Beijing, China
| | - Xiaowei Pan
- College of Life Science, Capital Normal University, Beijing, China
| | - Mei Li
- National Laboratory of Biomacromolecules, CAS Center for Excellence in Biomacromolecules, Institute of Biophysics, Chinese Academy of Sciences, Beijing, China.
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9
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Cherepanov DA, Semenov AY, Mamedov MD, Aybush AV, Gostev FE, Shelaev IV, Shuvalov VA, Nadtochenko VA. Current state of the primary charge separation mechanism in photosystem I of cyanobacteria. Biophys Rev 2022; 14:805-820. [PMID: 36124265 PMCID: PMC9481807 DOI: 10.1007/s12551-022-00983-1] [Citation(s) in RCA: 4] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/12/2022] [Accepted: 07/10/2022] [Indexed: 11/24/2022] Open
Abstract
This review analyzes new data on the mechanism of ultrafast reactions of primary charge separation in photosystem I (PS I) of cyanobacteria obtained in the last decade by methods of femtosecond absorption spectroscopy. Cyanobacterial PS I from many species harbours 96 chlorophyll a (Chl a) molecules, including six specialized Chls denoted Chl1A/Chl1B (dimer P700, or PAPB), Chl2A/Chl2B, and Chl3A/Chl3B arranged in two branches, which participate in electron transfer reactions. The current data indicate that the primary charge separation occurs in a symmetric exciplex, where the special pair P700 is electronically coupled to the symmetrically located monomers Chl2A and Chl2B, which can be considered together as a symmetric exciplex Chl2APAPBChl2B with the mixed excited (Chl2APAPBChl2B)* and two charge-transfer states P700 +Chl2A - and P700 +Chl2B -. The redistribution of electrons between the branches in favor of the A-branch occurs after reduction of the Chl2A and Chl2B monomers. The formation of charge-transfer states and the symmetry breaking mechanisms were clarified by measuring the electrochromic Stark shift of β-carotene and the absorption dynamics of PS I complexes with the genetically altered Chl 2B or Chl 2A monomers. The review gives a brief description of the main methods for analyzing data obtained using femtosecond absorption spectroscopy. The energy levels of excited and charge-transfer intermediates arising in the cyanobacterial PS I are critically analyzed.
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Affiliation(s)
- Dmitry A. Cherepanov
- N.N. Semenov Federal Research Center for Chemical Physics, Russian Academy of Sciences, 119991, Kosygina Street 1, Moscow, Russia
| | - Alexey Yu Semenov
- N.N. Semenov Federal Research Center for Chemical Physics, Russian Academy of Sciences, 119991, Kosygina Street 1, Moscow, Russia
- A.N. Belozersky Institute of Physical-Chemical Biology, M.V. Lomonosov Moscow State University, 119992 Leninskye gory 1 building, 40 Moscow, Russia
| | - Mahir D. Mamedov
- A.N. Belozersky Institute of Physical-Chemical Biology, M.V. Lomonosov Moscow State University, 119992 Leninskye gory 1 building, 40 Moscow, Russia
| | - Arseniy V. Aybush
- N.N. Semenov Federal Research Center for Chemical Physics, Russian Academy of Sciences, 119991, Kosygina Street 1, Moscow, Russia
| | - Fedor E. Gostev
- N.N. Semenov Federal Research Center for Chemical Physics, Russian Academy of Sciences, 119991, Kosygina Street 1, Moscow, Russia
| | - Ivan V. Shelaev
- N.N. Semenov Federal Research Center for Chemical Physics, Russian Academy of Sciences, 119991, Kosygina Street 1, Moscow, Russia
| | - Vladimir A. Shuvalov
- N.N. Semenov Federal Research Center for Chemical Physics, Russian Academy of Sciences, 119991, Kosygina Street 1, Moscow, Russia
| | - Victor A. Nadtochenko
- N.N. Semenov Federal Research Center for Chemical Physics, Russian Academy of Sciences, 119991, Kosygina Street 1, Moscow, Russia
- Department of Chemistry, Lomonosov Moscow State University, 119991, Leninskiye Gory 1-3, Moscow, Russia
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10
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Russo M, Casazza AP, Cerullo G, Santabarbara S, Maiuri M. Ultrafast excited state dynamics in the monomeric and trimeric photosystem I core complex of Spirulina platensis probed by two-dimensional electronic spectroscopy. J Chem Phys 2022; 156:164202. [PMID: 35490013 DOI: 10.1063/5.0078911] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/15/2022] Open
Abstract
Photosystem I (PSI), a naturally occurring supercomplex composed of a core part and a light-harvesting antenna, plays an essential role in the photosynthetic electron transfer chain. Evolutionary adaptation dictates a large variability in the type, number, arrangement, and absorption of the Chlorophylls (Chls) responsible for the early steps of light-harvesting and charge separation. For example, the specific location of long-wavelength Chls (referred to as red forms) in the cyanobacterial core has been intensively investigated, but the assignment of the chromophores involved is still controversial. The most red-shifted Chl a form has been observed in the trimer of the PSI core of the cyanobacterium Spirulina platensis, with an absorption centered at ∼740 nm. Here, we apply two-dimensional electronic spectroscopy to study photoexcitation dynamics in isolated trimers and monomers of the PSI core of S. platensis. By means of global analysis, we resolve and compare direct downhill and uphill excitation energy transfer (EET) processes between the bulk Chls and the red forms, observing significant differences between the monomer (lacking the most far red Chl form at 740 nm) and the trimer, with the ultrafast EET component accelerated by five times, from 500 to 100 fs, in the latter. Our findings highlight the complexity of EET dynamics occurring over a broad range of time constants and their sensitivity to energy distribution and arrangement of the cofactors involved. The comparison of monomeric and trimeric forms, differing both in the antenna dimension and in the extent of red forms, enables us to extract significant information regarding PSI functionality.
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Affiliation(s)
- Mattia Russo
- Dipartimento di Fisica, Politecnico di Milano, Piazza Leonardo da Vinci 32, 20133 Milano, Italy
| | - Anna Paola Casazza
- Istituto di Biologia e Biotecnologia Agraria, Consiglio Nazionale delle Ricerche, Via Bassini 15a, 20133 Milano, Italy
| | - Giulio Cerullo
- Dipartimento di Fisica, Politecnico di Milano, Piazza Leonardo da Vinci 32, 20133 Milano, Italy
| | - Stefano Santabarbara
- Photosynthesis Research Unit, Centro Studi sulla Biologia Cellulare e Molecolare delle Piante, Consiglio Nazionale delle Ricerche, Via Celoria 26, 20133 Milano, Italy
| | - Margherita Maiuri
- Dipartimento di Fisica, Politecnico di Milano, Piazza Leonardo da Vinci 32, 20133 Milano, Italy
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11
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Shen JR. Structure, Function, and Variations of the Photosystem I-Antenna Supercomplex from Different Photosynthetic Organisms. Subcell Biochem 2022; 99:351-377. [PMID: 36151382 DOI: 10.1007/978-3-031-00793-4_11] [Citation(s) in RCA: 7] [Impact Index Per Article: 2.3] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 06/16/2023]
Abstract
Photosystem I (PSI) is a protein complex functioning in light-induced charge separation, electron transfer, and reduction reactions of ferredoxin in photosynthesis, which finally results in the reduction of NAD(P)- to NAD(P)H required for the fixation of carbon dioxide. In eukaryotic algae, PSI is associated with light-harvesting complex I (LHCI) subunits, forming a PSI-LHCI supercomplex. LHCI harvests and transfers light energy to the PSI core, where charge separation and electron transfer reactions occur. During the course of evolution, the number and sequences of protein subunits and the pigments they bind in LHCI change dramatically depending on the species of organisms, which is a result of adaptation of organisms to various light environments. In this chapter, I will describe the structure of various PSI-LHCI supercomplexes from different organisms solved so far either by X-ray crystallography or by cryo-electron microscopy, with emphasis on the differences in the number, structures, and association patterns of LHCI subunits associated with the PSI core found in different organisms.
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Affiliation(s)
- Jian-Ren Shen
- Research Institute for Interdisciplinary Science, and Graduate School of Natural Science and Technology, Okayama University, Okayama, Japan.
- Key Laboratory of Photobiology, Institute of Botany, Chinese Academy of Sciences, Beijing, China.
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12
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Kondo T, Shibata Y. Recent advances in single-molecule spectroscopy studies on light-harvesting processes in oxygenic photosynthesis. Biophys Physicobiol 2022. [PMCID: PMC9173860 DOI: 10.2142/biophysico.bppb-v19.0013] [Citation(s) in RCA: 3] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/01/2022] Open
Abstract
Photosynthetic light-harvesting complexes (LHCs) play a crucial role in concentrating the photon energy from the sun that otherwise excites a typical pigment molecule, such as chlorophyll-a, only several times a second. Densely packed pigments in the complexes ensure efficient energy transfer to the reaction center. At the same time, LHCs have the ability to switch to an energy-quenching state and thus play a photoprotective role under excessive light conditions. Photoprotection is especially important for oxygenic photosynthetic organisms because toxic reactive oxygen species can be generated through photochemistry under aerobic conditions. Because of the extreme complexity of the systems in which various types of pigment molecules strongly interact with each other and with the surrounding protein matrixes, there has been long-standing difficulty in understanding the molecular mechanisms underlying the flexible switching between the light-harvesting and quenching states. Single-molecule spectroscopy studies are suitable to reveal the conformational dynamics of LHCs reflected in the fluorescence properties that are obscured in ordinary ensemble measurements. Recent advanced single-molecule spectroscopy studies have revealed the dynamical fluctuations of LHCs in their fluorescence peak position, intensity, and lifetime. The observed dynamics seem relevant to the conformational plasticity required for the flexible activations of photoprotective energy quenching. In this review, we survey recent advances in the single-molecule spectroscopy study of the light-harvesting systems of oxygenic photosynthesis.
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Affiliation(s)
- Toru Kondo
- School of Life Science and Technology, Tokyo Institute of Technology
| | - Yutaka Shibata
- Department of Chemistry, Graduate School of Science, Tohoku University
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13
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Open hardware microsecond dispersive transient absorption spectrometer for linear optical response. Photochem Photobiol Sci 2021; 21:23-35. [PMID: 34748198 PMCID: PMC8799588 DOI: 10.1007/s43630-021-00127-6] [Citation(s) in RCA: 4] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/31/2021] [Accepted: 10/23/2021] [Indexed: 01/10/2023]
Abstract
Abstract An open hardware design and implementation for a transient absorption spectrometer are presented that has microsecond time resolution and measures full difference spectra in the visible spectral region from 380 to 750 nm. The instrument has been designed to allow transient absorption spectroscopy measurements of either low or high quantum yield processes by combining intense sub-microsecond excitation flashes using a xenon lamp together with stroboscopic non-actinic white light probing using LED sources driven under high pulsed current from a capacitor bank. The instrument is sensitive to resolve 0.15 mOD flash-induced differences within 1000 measurements at 20 Hz repetition rate using an inexpensive CCD sensor with 200 μm pixel dimension, 40 K electrons full well capacity and a dynamic range of 1800. The excitation flash has 230 ns pulse duration and the 2 mJ flash energy allows spectral filtering while retaining high power density with focussing to generate mOD signals in the 10–4–10–1 ΔOD range. We present the full electronics design and construction of the flash and probe sources, the optics as well as the timing electronics and CCD spectrometer operation and modification for internal signal referencing. The performance characterisation and example measurements are demonstrated using microsecond TAS of Congo red dye, as an example of a low quantum yield photoreaction at 2% with up to 78% of molecules excited. The instrument is fully open hardware and combines inexpensive selection of commercial components, optics and electronics and allows linear response measurements of photoinduced reactions for the purpose of accurate global analysis of chemical dynamics. Graphical abstract ![]()
Supplementary Information The online version contains supplementary material available at 10.1007/s43630-021-00127-6.
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14
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Gorka M, Baldansuren A, Malnati A, Gruszecki E, Golbeck JH, Lakshmi KV. Shedding Light on Primary Donors in Photosynthetic Reaction Centers. Front Microbiol 2021; 12:735666. [PMID: 34659164 PMCID: PMC8517396 DOI: 10.3389/fmicb.2021.735666] [Citation(s) in RCA: 21] [Impact Index Per Article: 5.3] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/03/2021] [Accepted: 08/30/2021] [Indexed: 11/17/2022] Open
Abstract
Chlorophylls (Chl)s exist in a variety of flavors and are ubiquitous in both the energy and electron transfer processes of photosynthesis. The functions they perform often occur on the ultrafast (fs-ns) time scale and until recently, these have been difficult to measure in real time. Further, the complexity of the binding pockets and the resulting protein-matrix effects that alter the respective electronic properties have rendered theoretical modeling of these states difficult. Recent advances in experimental methodology, computational modeling, and emergence of new reaction center (RC) structures have renewed interest in these processes and allowed researchers to elucidate previously ambiguous functions of Chls and related pheophytins. This is complemented by a wealth of experimental data obtained from decades of prior research. Studying the electronic properties of Chl molecules has advanced our understanding of both the nature of the primary charge separation and subsequent electron transfer processes of RCs. In this review, we examine the structures of primary electron donors in Type I and Type II RCs in relation to the vast body of spectroscopic research that has been performed on them to date. Further, we present density functional theory calculations on each oxidized primary donor to study both their electronic properties and our ability to model experimental spectroscopic data. This allows us to directly compare the electronic properties of hetero- and homodimeric RCs.
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Affiliation(s)
- Michael Gorka
- Department of Biochemistry and Molecular Biology, The Pennsylvania State University, University Park, PA, United States
| | - Amgalanbaatar Baldansuren
- Department of Chemistry and Chemical Biology and The Baruch ’60 Center for Biochemical Solar Energy Research, Rensselaer Polytechnic Institute, Troy, NY, United States
| | - Amanda Malnati
- Department of Chemistry and Chemical Biology and The Baruch ’60 Center for Biochemical Solar Energy Research, Rensselaer Polytechnic Institute, Troy, NY, United States
| | - Elijah Gruszecki
- Department of Chemistry and Chemical Biology and The Baruch ’60 Center for Biochemical Solar Energy Research, Rensselaer Polytechnic Institute, Troy, NY, United States
| | - John H. Golbeck
- Department of Biochemistry and Molecular Biology, The Pennsylvania State University, University Park, PA, United States
- Department of Chemistry, The Pennsylvania State University, University Park, PA, United States
| | - K. V. Lakshmi
- Department of Chemistry and Chemical Biology and The Baruch ’60 Center for Biochemical Solar Energy Research, Rensselaer Polytechnic Institute, Troy, NY, United States
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15
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Kanda T, Saito K, Ishikita H. Electron Acceptor-Donor Iron Sites in the Iron-Sulfur Cluster of Photosynthetic Electron-Transfer Pathways. J Phys Chem Lett 2021; 12:7431-7438. [PMID: 34338530 DOI: 10.1021/acs.jpclett.1c01896] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 06/13/2023]
Abstract
In photosystem I, two electron-transfer pathways via quinones (A1A and A1B) are merged at the iron-sulfur Fe4S4 cluster FX into a single pathway toward the other two Fe4S4 clusters FA and FB. Using a quantum mechanical/molecular mechanical approach, we identify the redox-active Fe sites in the clusters. In FA and FB, the Fe site, which does not belong to the CxxCxxCxxxCP motif, serves as an electron acceptor/donor. FX has two independent electron acceptor Fe sites for A- and B-branch electron transfers, depending on the Asp-B575 protonation state, which causes the A1A-to-FX electron transfer to be uphill and the A1B-to-FX electron transfer to be downhill. The two asymmetric electron-transfer pathways from A1 to FX and the separation of the electron acceptor and donor Fe sites are likely associated with the specific role of FX in merging the two electron transfer pathways into the single pathway.
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Affiliation(s)
- Tomoki Kanda
- Department of Applied Chemistry, The University of Tokyo, 7-3-1 Hongo, Bunkyo-ku, Tokyo 113-8654, Japan
| | - Keisuke Saito
- Department of Applied Chemistry, The University of Tokyo, 7-3-1 Hongo, Bunkyo-ku, Tokyo 113-8654, Japan
- Research Center for Advanced Science and Technology, The University of Tokyo, 4-6-1 Komaba, Meguro-ku, Tokyo 153-8904, Japan
| | - Hiroshi Ishikita
- Department of Applied Chemistry, The University of Tokyo, 7-3-1 Hongo, Bunkyo-ku, Tokyo 113-8654, Japan
- Research Center for Advanced Science and Technology, The University of Tokyo, 4-6-1 Komaba, Meguro-ku, Tokyo 153-8904, Japan
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16
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Gorka M, Charles P, Kalendra V, Baldansuren A, Lakshmi KV, Golbeck JH. A dimeric chlorophyll electron acceptor differentiates type I from type II photosynthetic reaction centers. iScience 2021; 24:102719. [PMID: 34278250 PMCID: PMC8267441 DOI: 10.1016/j.isci.2021.102719] [Citation(s) in RCA: 12] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/05/2020] [Revised: 05/17/2021] [Accepted: 06/09/2021] [Indexed: 01/09/2023] Open
Abstract
This research addresses one of the most compelling issues in the field of photosynthesis, namely, the role of the accessory chlorophyll molecules in primary charge separation. Using a combination of empirical and computational methods, we demonstrate that the primary acceptor of photosystem (PS) I is a dimer of accessory and secondary chlorophyll molecules, Chl2A and Chl3A, with an asymmetric electron charge density distribution. The incorporation of highly coupled donors and acceptors in PS I allows for extensive delocalization that prolongs the lifetime of the charge-separated state, providing for high quantum efficiency. The discovery of this motif has widespread implications ranging from the evolution of naturally occurring reaction centers to the development of a new generation of highly efficient artificial photosynthetic systems. Video abstract
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Affiliation(s)
- Michael Gorka
- Department of Biochemistry and Molecular Biology, The Pennsylvania State University, University Park, PA 16802, USA
| | - Philip Charles
- Department of Chemistry and Chemical Biology and The Baruch '60 Center for Biochemical Solar Energy Research, Rensselaer Polytechnic Institute, Troy, NY 12180, USA
| | - Vidmantas Kalendra
- Department of Chemistry and Chemical Biology and The Baruch '60 Center for Biochemical Solar Energy Research, Rensselaer Polytechnic Institute, Troy, NY 12180, USA
| | - Amgalanbaatar Baldansuren
- Department of Chemistry and Chemical Biology and The Baruch '60 Center for Biochemical Solar Energy Research, Rensselaer Polytechnic Institute, Troy, NY 12180, USA
| | - K V Lakshmi
- Department of Chemistry and Chemical Biology and The Baruch '60 Center for Biochemical Solar Energy Research, Rensselaer Polytechnic Institute, Troy, NY 12180, USA
| | - John H Golbeck
- Department of Biochemistry and Molecular Biology, The Pennsylvania State University, University Park, PA 16802, USA.,Department of Chemistry, The Pennsylvania State University, University Park, PA 16802, USA
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17
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Lokstein H, Renger G, Götze JP. Photosynthetic Light-Harvesting (Antenna) Complexes-Structures and Functions. Molecules 2021; 26:molecules26113378. [PMID: 34204994 PMCID: PMC8199901 DOI: 10.3390/molecules26113378] [Citation(s) in RCA: 49] [Impact Index Per Article: 12.3] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/27/2021] [Revised: 05/27/2021] [Accepted: 05/28/2021] [Indexed: 02/07/2023] Open
Abstract
Chlorophylls and bacteriochlorophylls, together with carotenoids, serve, noncovalently bound to specific apoproteins, as principal light-harvesting and energy-transforming pigments in photosynthetic organisms. In recent years, enormous progress has been achieved in the elucidation of structures and functions of light-harvesting (antenna) complexes, photosynthetic reaction centers and even entire photosystems. It is becoming increasingly clear that light-harvesting complexes not only serve to enlarge the absorption cross sections of the respective reaction centers but are vitally important in short- and long-term adaptation of the photosynthetic apparatus and regulation of the energy-transforming processes in response to external and internal conditions. Thus, the wide variety of structural diversity in photosynthetic antenna “designs” becomes conceivable. It is, however, common for LHCs to form trimeric (or multiples thereof) structures. We propose a simple, tentative explanation of the trimer issue, based on the 2D world created by photosynthetic membrane systems.
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Affiliation(s)
- Heiko Lokstein
- Department of Chemical Physics and Optics, Charles University, Ke Karlovu 3, 12116 Prague, Czech Republic
- Correspondence:
| | - Gernot Renger
- Max-Volmer-Laboratorium, Technische Universität Berlin, Straße des 17. Juni 135, D-10623 Berlin, Germany
| | - Jan P. Götze
- Institut für Chemie und Biochemie, Freie Universität Berlin, Arnimallee 22, D-14195 Berlin, Germany;
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18
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Gorka M, Gruszecki E, Charles P, Kalendra V, Lakshmi KV, Golbeck JH. Two-dimensional HYSCORE spectroscopy reveals a histidine imidazole as the axial ligand to Chl 3A in the M688H PsaA genetic variant of Photosystem I. BIOCHIMICA ET BIOPHYSICA ACTA-BIOENERGETICS 2021; 1862:148424. [PMID: 33785317 DOI: 10.1016/j.bbabio.2021.148424] [Citation(s) in RCA: 4] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [Subscribe] [Scholar Register] [Received: 10/01/2020] [Revised: 02/28/2021] [Accepted: 03/24/2021] [Indexed: 12/17/2022]
Abstract
Recent studies on Photosystem I (PS I) have shown that the six core chlorophyll a molecules are highly coupled, allowing for efficient creation and stabilization of the charge-separated state. One area of particular interest is the identity and function of the primary acceptor, A0, as the factors that influence its ultrafast processes and redox properties are not yet fully elucidated. It was recently shown that A0 exists as a dimer of the closely-spaced Chl2/Chl3 molecules wherein the reduced A0- state has an asymmetric distribution of electron spin density that favors Chl3. Previous experimental work in which this ligand was changed to a hard base (histidine, M688HPsaA) revealed severely impacted electron transfer processes at both the A0 and A1 acceptors; molecular dynamics simulations further suggested two distinct conformations of PS I in which the His residue coordinates and forms a hydrogen bond to the A0 and A1 cofactors, respectively. In this study, we have applied 2D HYSCORE spectroscopy in conjunction with molecular dynamics simulations and density functional theory calculations to the study of the M688HPsaA variant. Analysis of the hyperfine parameters demonstrates that the His imidazole serves as the axial ligand to the central Mg2+ ion in Chl3A in the M688HPsaA variant. Although the change in ligand identity does not alter delocalization of electron density over the Chl2/Chl3 dimer, a small shift in the asymmetry of delocalization, coupled with the electron withdrawing properties of the ligand, most likely accounts for the inhibition of forward electron transfer in the His-ligated conformation.
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Affiliation(s)
- Michael Gorka
- Department of Biochemistry and Molecular Biology, The Pennsylvania State University, State College, PA 16802, USA
| | - Elijah Gruszecki
- Department of Chemistry and Chemical Biology and The Baruch '60 Center for Biochemical Solar Energy Research, Rensselaer Polytechnic Institute, Troy, NY 12180, USA
| | - Philip Charles
- Department of Chemistry and Chemical Biology and The Baruch '60 Center for Biochemical Solar Energy Research, Rensselaer Polytechnic Institute, Troy, NY 12180, USA
| | - Vidmantas Kalendra
- Department of Chemistry and Chemical Biology and The Baruch '60 Center for Biochemical Solar Energy Research, Rensselaer Polytechnic Institute, Troy, NY 12180, USA
| | - K V Lakshmi
- Department of Chemistry and Chemical Biology and The Baruch '60 Center for Biochemical Solar Energy Research, Rensselaer Polytechnic Institute, Troy, NY 12180, USA.
| | - John H Golbeck
- Department of Biochemistry and Molecular Biology, The Pennsylvania State University, State College, PA 16802, USA; Department of Chemistry, The Pennsylvania State University, State College, PA 16802, USA.
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19
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Mitsuhashi K, Tamura H, Saito K, Ishikita H. Nature of Asymmetric Electron Transfer in the Symmetric Pathways of Photosystem I. J Phys Chem B 2021; 125:2879-2885. [DOI: 10.1021/acs.jpcb.0c10885] [Citation(s) in RCA: 11] [Impact Index Per Article: 2.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/18/2022]
Affiliation(s)
- Koji Mitsuhashi
- Department of Applied Chemistry, The University of Tokyo, 7-3-1 Hongo, Bunkyo-ku, Tokyo 113-8654, Japan
| | - Hiroyuki Tamura
- Department of Applied Chemistry, The University of Tokyo, 7-3-1 Hongo, Bunkyo-ku, Tokyo 113-8654, Japan
- Research Center for Advanced Science and Technology, The University of Tokyo, 4-6-1 Komaba, Meguro-ku, Tokyo 153-8904, Japan
| | - Keisuke Saito
- Department of Applied Chemistry, The University of Tokyo, 7-3-1 Hongo, Bunkyo-ku, Tokyo 113-8654, Japan
- Research Center for Advanced Science and Technology, The University of Tokyo, 4-6-1 Komaba, Meguro-ku, Tokyo 153-8904, Japan
| | - Hiroshi Ishikita
- Department of Applied Chemistry, The University of Tokyo, 7-3-1 Hongo, Bunkyo-ku, Tokyo 113-8654, Japan
- Research Center for Advanced Science and Technology, The University of Tokyo, 4-6-1 Komaba, Meguro-ku, Tokyo 153-8904, Japan
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20
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Cherepanov DA, Shelaev IV, Gostev FE, Petrova A, Aybush AV, Nadtochenko VA, Xu W, Golbeck JH, Semenov AY. Primary charge separation within the structurally symmetric tetrameric Chl 2AP AP BChl 2B chlorophyll exciplex in photosystem I. JOURNAL OF PHOTOCHEMISTRY AND PHOTOBIOLOGY B-BIOLOGY 2021; 217:112154. [PMID: 33636482 DOI: 10.1016/j.jphotobiol.2021.112154] [Citation(s) in RCA: 21] [Impact Index Per Article: 5.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 10/23/2020] [Revised: 01/05/2021] [Accepted: 02/12/2021] [Indexed: 12/01/2022]
Abstract
In Photosystem I (PS I), the role of the accessory chlorophyll (Chl) molecules, Chl2A and Chl2B (also termed A-1A and A-1B), which are directly adjacent to the special pair P700 and fork into the A- and B-branches of electron carriers, is incompletely understood. In this work, the Chl2A and Chl2B transient absorption ΔA0(λ) at a time delay of 100 fs was identified by ultrafast pump-probe spectroscopy in three pairs of PS I complexes from Synechocystis sp. PCC 6803 with residues PsaA-N600 or PsaB-N582 (which ligate Chl2B or Chl2A through a H2O molecule) substituted by Met, His, and Leu. The ΔA0(λ) spectra were quantified using principal component analysis, the main component of which was interpreted as a mutation-induced shift of the equilibrium between the excited state of primary donor P700⁎ and the primary charge-separated state P700+Chl2-. This equilibrium is shifted to the charge-separated state in wild-type PS I and to the excited P700 in the PS I complexes with the substituted ligands to the Chl2A and Chl2B monomers. The results can be rationalized within the framework of an adiabatic model in which the P700 is electronically coupled with the symmetrically arranged monomers Chl2A and Chl2B; such a structure can be considered a symmetric tetrameric exciplex Chl2APAPBChl2B, in which the excited state (Chl2APAPBChl2B)* is mixed with two charge-transfer states P700+Chl2A- and P700+Chl2B-. The electron redistribution between the two branches in favor of the A-branch apparently takes place in the picosecond time scale after reduction of the Chl2A and Chl2B monomers.
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Affiliation(s)
- Dmitry A Cherepanov
- N.N. Semenov Federal Research Center for Chemical Physics, Russian Academy of Sciences, 117977 Moscow, Kosygina st., 4, Russia.
| | - Ivan V Shelaev
- N.N. Semenov Federal Research Center for Chemical Physics, Russian Academy of Sciences, 117977 Moscow, Kosygina st., 4, Russia
| | - Fedor E Gostev
- N.N. Semenov Federal Research Center for Chemical Physics, Russian Academy of Sciences, 117977 Moscow, Kosygina st., 4, Russia
| | - Anastasia Petrova
- A.N. Belozersky Institute of Physical-Chemical Biology, Lomonosov Moscow State University, 119992 Moscow, Leninskie gory, 1, Building 40, Russia
| | - Arseniy V Aybush
- N.N. Semenov Federal Research Center for Chemical Physics, Russian Academy of Sciences, 117977 Moscow, Kosygina st., 4, Russia
| | - Victor A Nadtochenko
- N.N. Semenov Federal Research Center for Chemical Physics, Russian Academy of Sciences, 117977 Moscow, Kosygina st., 4, Russia; Department of Chemistry, Lomonosov Moscow State University, Leninskiye Gory 1-3, Moscow 119991, Russian Federation
| | - Wu Xu
- Department of Chemistry, University of Louisiana at Lafayette, Lafayette, LA 70504, USA
| | - John H Golbeck
- Department of Biochemistry and Molecular Biology, The Pennsylvania State University, University Park, PA 16801, USA; Department of Chemistry, The Pennsylvania State University, University Park, PA 16801, USA
| | - Alexey Yu Semenov
- N.N. Semenov Federal Research Center for Chemical Physics, Russian Academy of Sciences, 117977 Moscow, Kosygina st., 4, Russia; A.N. Belozersky Institute of Physical-Chemical Biology, Lomonosov Moscow State University, 119992 Moscow, Leninskie gory, 1, Building 40, Russia
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21
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Chestnut MM, Milikisiyants S, Chatterjee R, Kern J, Smirnov AI. Electronic Structure of the Primary Electron Donor P700+• in Photosystem I Studied by Multifrequency HYSCORE Spectroscopy at X- and Q-Band. J Phys Chem B 2021; 125:36-48. [PMID: 33356277 DOI: 10.1021/acs.jpcb.0c09000] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
Abstract
The primary electron donor P700 of the photosystem I (PSI) is a heterodimer consisting of two chlorophyll molecules. A series of electron-transfer events immediately following the initial light excitation leads to a stabilization of the positive charge by its cation radical form, P700+•. The electronic structure of P700+• and, in particular, its asymmetry with respect to the two chlorophyll monomers is of fundamental interest and is not fully understood up to this date. Here, we apply multifrequency X- (9 GHz) and Q-band (35 GHz) hyperfine sublevel correlation (HYSCORE) spectroscopy to investigate the electron spin density distribution in the cation radical P700+• of PSI from a thermophilic cyanobacterium Thermosynechococcus elongatus. Six 14N and two 1H distinct nuclei have been resolved in the HYSCORE spectra and parameters of the corresponding nuclear hyperfine and quadrupolar hyperfine interactions were obtained by combining the analysis of HYSCORE spectral features with direct numerical simulations. Based on a close similarity of the nuclear quadrupole tensor parameters, all of the resolved 14N nuclei were assigned to six out of total eight available pyrrole ring nitrogen atoms (i.e., four in each of the chlorophylls), providing direct evidence of spin density delocalization over the both monomers in the heterodimer. Using the obtained experimental values of the 14N electron-nuclear hyperfine interaction parameters, the upper limit of the electron spin density asymmetry parameter is estimated as RA/Bupper = 7.7 ± 0.5, while a tentative assignment of 14N observed in the HYSCORE spectra yields RB/A = 3.1 ± 0.5.
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Affiliation(s)
- Melanie M Chestnut
- Department of Chemistry, North Carolina State University, 2620 Yarbrough Drive, Raleigh, North Carolina 27695-8204, United States
| | - Sergey Milikisiyants
- Department of Chemistry, North Carolina State University, 2620 Yarbrough Drive, Raleigh, North Carolina 27695-8204, United States
| | - Ruchira Chatterjee
- Molecular Biophysics and Integrated Bioimaging Division, Lawrence Berkeley National Laboratory, Berkeley, California 94720, United States
| | - Jan Kern
- Molecular Biophysics and Integrated Bioimaging Division, Lawrence Berkeley National Laboratory, Berkeley, California 94720, United States
| | - Alex I Smirnov
- Department of Chemistry, North Carolina State University, 2620 Yarbrough Drive, Raleigh, North Carolina 27695-8204, United States
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22
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Bag P, Chukhutsina V, Zhang Z, Paul S, Ivanov AG, Shutova T, Croce R, Holzwarth AR, Jansson S. Direct energy transfer from photosystem II to photosystem I confers winter sustainability in Scots Pine. Nat Commun 2020; 11:6388. [PMID: 33319777 PMCID: PMC7738668 DOI: 10.1038/s41467-020-20137-9] [Citation(s) in RCA: 32] [Impact Index Per Article: 6.4] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/30/2020] [Accepted: 11/13/2020] [Indexed: 11/24/2022] Open
Abstract
Evergreen conifers in boreal forests can survive extremely cold (freezing) temperatures during long dark winter and fully recover during summer. A phenomenon called "sustained quenching" putatively provides photoprotection and enables their survival, but its precise molecular and physiological mechanisms are not understood. To unveil them, here we have analyzed seasonal adjustment of the photosynthetic machinery of Scots pine (Pinus sylvestris) trees by monitoring multi-year changes in weather, chlorophyll fluorescence, chloroplast ultrastructure, and changes in pigment-protein composition. Analysis of Photosystem II and Photosystem I performance parameters indicate that highly dynamic structural and functional seasonal rearrangements of the photosynthetic apparatus occur. Although several mechanisms might contribute to 'sustained quenching' of winter/early spring pine needles, time-resolved fluorescence analysis shows that extreme down-regulation of photosystem II activity along with direct energy transfer from photosystem II to photosystem I play a major role. This mechanism is enabled by extensive thylakoid destacking allowing for the mixing of PSII with PSI complexes. These two linked phenomena play crucial roles in winter acclimation and protection.
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Affiliation(s)
- Pushan Bag
- Umeå Plant Science Centre, Department of Plant Physiology, Umeå University, Umeå, Sweden
| | - Volha Chukhutsina
- Department of Physics and Astronomy, Faculty of Sciences, Vrije Universiteit Amsterdam, Amsterdam, The Netherlands
- Department of Life Sciences, Imperial College London, London, UK
| | - Zishan Zhang
- Umeå Plant Science Centre, Department of Plant Physiology, Umeå University, Umeå, Sweden
- State Key Laboratory of Crop Biology, College of Life Sciences, Shandong Agricultural University, Shandong, China
| | - Suman Paul
- Umeå Plant Science Centre, Department of Plant Physiology, Umeå University, Umeå, Sweden
- Department of Biochemistry and Biophysics, Stockholm University, Stockholm, Sweden
| | - Alexander G Ivanov
- Department of Biology, University of Western Ontario, London, Ontario, Canada
- Institute of Biophysics and Biomedical Engineering, Bulgarian Academy of Sciences, Sofia, Bulgaria
| | - Tatyana Shutova
- Umeå Plant Science Centre, Department of Plant Physiology, Umeå University, Umeå, Sweden
| | - Roberta Croce
- Department of Physics and Astronomy, Faculty of Sciences, Vrije Universiteit Amsterdam, Amsterdam, The Netherlands
| | - Alfred R Holzwarth
- Department of Physics and Astronomy, Faculty of Sciences, Vrije Universiteit Amsterdam, Amsterdam, The Netherlands.
| | - Stefan Jansson
- Umeå Plant Science Centre, Department of Plant Physiology, Umeå University, Umeå, Sweden.
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23
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Janssen G, Eschenbach P, Kurle P, Bode B, Neugebauer J, de Groot H, Matysik J, Alia A. Analysis of the electronic structure of the primary electron donor of photosystem I of Spirodelaoligorrhiza by photochemically induced dynamic nuclear polarization (photo-CIDNP) solid-state nuclear magnetic resonance (NMR). MAGNETIC RESONANCE 2020; 1:261-274. [PMCID: PMC10655075 DOI: 10.5194/mr-1-261-2020] [Citation(s) in RCA: 6] [Impact Index Per Article: 1.2] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Received: 09/03/2020] [Accepted: 10/28/2020] [Indexed: 12/22/2024]
Abstract
The electron donor in photosystem I (PSI), the chlorophyll dimer P700, is studied by photochemically induced dynamic nuclear polarization (photo-CIDNP) magic angle spinning (MAS) nuclear magnetic resonance (NMR) on selectively 13 C and uniformly 15 N labeled PSI core preparations (PSI-100) obtained from the aquatic plant duckweed (Spirodela oligorrhiza ). Light-induced signals originate from the isotope-labeled nuclei of the cofactors involved in the spin-correlated radical pair forming upon light excitation. Signals are assigned to the two donor cofactors (Chl a and Chl a ') and the two acceptor cofactors (both Chl a ). Light-induced signals originating from both donor and acceptor cofactors demonstrate that electron transfer occurs through both branches of cofactors in the pseudo-C 2 symmetric reaction center (RC). The experimental results supported by quantum chemical calculations indicate that this functional symmetry occurs in PSI despite similarly sized chemical shift differences between the cofactors of PSI and the functionally asymmetric special pair donor of the bacterial RC of Rhodobacter sphaeroides . This contributes to converging evidence that local differences in time-averaged electronic ground-state properties, over the donor are of little importance for the functional symmetry breaking across photosynthetic RC species.
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Affiliation(s)
- Geertje J. Janssen
- Leiden Institute of Chemistry, Leiden University, 2300 RA Leiden, the Netherlands
| | - Patrick Eschenbach
- Organisch-Chemisches Institut, Universität Münster, 48149 Münster, Germany
- Center for Multiscale Theory and Computation, Universität Münster, 48149 Münster, Germany
| | - Patrick Kurle
- Institut für Analytische Chemie, Universität Leipzig,
04189 Leipzig, Germany
| | - Bela E. Bode
- EaStCHEM School of Chemistry, Biomedical Sciences Research Complex and Centre of Magnetic Resonance, KY16 9ST St Andrews, Scotland
| | - Johannes Neugebauer
- Organisch-Chemisches Institut, Universität Münster, 48149 Münster, Germany
- Center for Multiscale Theory and Computation, Universität Münster, 48149 Münster, Germany
| | - Huub J. M. de Groot
- Leiden Institute of Chemistry, Leiden University, 2300 RA Leiden, the Netherlands
| | - Jörg Matysik
- Institut für Analytische Chemie, Universität Leipzig,
04189 Leipzig, Germany
| | - Alia Alia
- Leiden Institute of Chemistry, Leiden University, 2300 RA Leiden, the Netherlands
- Institut für Medizinische Physik und Biophysik, Universität
Leipzig, 04103 Leipzig, Germany
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24
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Szewczyk S, Białek R, Giera W, Burdziński G, van Grondelle R, Gibasiewicz K. Excitation dynamics in Photosystem I trapped in TiO 2 mesopores. PHOTOSYNTHESIS RESEARCH 2020; 144:235-245. [PMID: 32114649 PMCID: PMC7203582 DOI: 10.1007/s11120-020-00730-1] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 12/03/2019] [Accepted: 02/20/2020] [Indexed: 06/10/2023]
Abstract
Excitation decay in closed Photosystem I (PSI) isolated from cyanobacterium Synechocystis sp. PCC 6803 and dissolved in a buffer solution occurs predominantly with a ~ 24-ps lifetime, as measured both by time-resolved fluorescence and transient absorption. The same PSI particles deposited in mesoporous matrix made of TiO2 nanoparticles exhibit significantly accelerated excitation decay dominated by a ~ 6-ps component. Target analysis indicates that this acceleration is caused by ~ 50% increase of the rate constant of bulk Chls excitation quenching. As an effect of this increase, as much as ~ 70% of bulk Chls excitation is quenched before the establishment of equilibrium with the red Chls. Accelerated quenching may be caused by increased excitation trapping by the reaction center and/or quenching properties of the TiO2 surface directly interacting with PSI Chls. Also properties of the PSI red Chls are affected by the deposition in the TiO2 matrix: they become deeper traps due to an increase of their number and their oscillator strength is significantly reduced. These effects should be taken into account when constructing solar cells' photoelectrodes composed of PSI and artificial matrices.
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Affiliation(s)
- S Szewczyk
- Faculty of Physics, Adam Mickiewicz University in Poznań, ul. Uniwersytetu Poznańskiego 2, 61-614, Poznan, Poland
| | - R Białek
- Faculty of Physics, Adam Mickiewicz University in Poznań, ul. Uniwersytetu Poznańskiego 2, 61-614, Poznan, Poland
| | - W Giera
- Faculty of Physics, Adam Mickiewicz University in Poznań, ul. Uniwersytetu Poznańskiego 2, 61-614, Poznan, Poland
| | - G Burdziński
- Faculty of Physics, Adam Mickiewicz University in Poznań, ul. Uniwersytetu Poznańskiego 2, 61-614, Poznan, Poland
| | - R van Grondelle
- Department of Physics and Astronomy, Vrije Universiteit, De Boelelaan 1081, 1081 HV, Amsterdam, The Netherlands
| | - K Gibasiewicz
- Faculty of Physics, Adam Mickiewicz University in Poznań, ul. Uniwersytetu Poznańskiego 2, 61-614, Poznan, Poland.
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25
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Evidence that chlorophyll f functions solely as an antenna pigment in far-red-light photosystem I from Fischerella thermalis PCC 7521. BIOCHIMICA ET BIOPHYSICA ACTA-BIOENERGETICS 2020; 1861:148184. [PMID: 32179058 DOI: 10.1016/j.bbabio.2020.148184] [Citation(s) in RCA: 30] [Impact Index Per Article: 6.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 09/25/2019] [Revised: 02/21/2020] [Accepted: 03/09/2020] [Indexed: 11/20/2022]
Abstract
The Photosystem I (PSI) reaction center in cyanobacteria is comprised of ~96 chlorophyll (Chl) molecules, including six specialized Chl molecules denoted Chl1A/Chl1B (P700), Chl2A/Chl2B, and Chl3A/Chl3B that are arranged in two branches and function in primary charge separation. It has recently been proposed that PSI from Chroococcidiopsis thermalis (Nürnberg et al. (2018) Science 360, 1210-1213) and Fischerella thermalis PCC 7521 (Hastings et al. (2019) Biochim. Biophys. Acta 1860, 452-460) contain Chl f in the positions Chl2A/Chl2B. We tested this proposal by exciting RCs from white-light grown (WL-PSI) and far-red light grown (FRL-PSI) F. thermalis PCC 7521 with femtosecond pulses and analyzing the optical dynamics. If Chl f were in the position Chl2A/Chl2B in FRL-PSI, excitation at 740 nm should have produced the charge-separated state P700+A0- followed by electron transfer to A1 with a τ of ≤25 ps. Instead, it takes ~230 ps for the charge-separated state to develop because the excitation migrates uphill from Chl f in the antenna to the trapping center. Further, we observe a strong electrochromic shift at 685 nm in the final P700+A1- spectrum that can only be explained if Chl a is in the positions Chl2A/Chl2B. Similar arguments rule out the presence of Chl f in the positions Chl3A/Chl3B; hence, Chl f is likely to function solely as an antenna pigment in FRL-PSI. We additionally report the presence of an excitonically coupled homo- or heterodimer of Chl f absorbing around 790 nm that is kinetically independent of the Chl f population that absorbs around 740 nm.
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26
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Laisk A, Oja V. Variable fluorescence of closed photochemical reaction centers. PHOTOSYNTHESIS RESEARCH 2020; 143:335-346. [PMID: 31960223 DOI: 10.1007/s11120-020-00712-3] [Citation(s) in RCA: 17] [Impact Index Per Article: 3.4] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 09/05/2019] [Accepted: 01/13/2020] [Indexed: 05/12/2023]
Abstract
Chlorophyll fluorescence induction during 0.4 to 200 ms multiple-turnover pulses (MTP) was measured in parallel with O2 evolution induced by the MTP light. Additionally, a saturating single-turnover flash (STF) was applied at the end of each MTP and the total MTP +STF O2 evolution was measured. Quantum yield of O2 evolution during the MTP transients was calculated and related to the number of open PSII centers, found from the STF O2 evolution. Proportionality between the number of open PSII and their running photochemical activity showed the quantum yield of open PSII remained constant independent of the closure of adjacent centers. During the induction, total fluorescence was partitioned between Fo of all the open centers and Fc of all the closed centers. The fluorescence yield of a closed center was 0.55 of the final Fm while less than a half of the centers were closed, but later increased, approaching Fm to the end of the induction. In the framework of the antenna/radical pair equilibrium model, the collective rise of the fluorescence of centers closed earlier during the induction is explained by an electric field, facilitating return of excitation energy from the Pheo- P680+ radical pair to the antenna.
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Affiliation(s)
- Agu Laisk
- Institute of Technology, University of Tartu, Nooruse st. 1, 50411, Tartu, Estonia.
| | - Vello Oja
- Institute of Technology, University of Tartu, Nooruse st. 1, 50411, Tartu, Estonia
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27
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Cherepanov DA, Brady NG, Shelaev IV, Nguyen J, Gostev FE, Mamedov MD, Nadtochenko VA, Bruce BD. PSI-SMALP, a Detergent-free Cyanobacterial Photosystem I, Reveals Faster Femtosecond Photochemistry. Biophys J 2020; 118:337-351. [PMID: 31882247 PMCID: PMC6976803 DOI: 10.1016/j.bpj.2019.11.3391] [Citation(s) in RCA: 21] [Impact Index Per Article: 4.2] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/20/2019] [Revised: 11/17/2019] [Accepted: 11/26/2019] [Indexed: 12/12/2022] Open
Abstract
Cyanobacterial photosystem I (PSI) functions as a light-driven cyt c6-ferredoxin/oxidoreductase located in the thylakoid membrane. In this work, the energy and charge transfer processes in PSI complexes isolated from Thermosynechococcus elongatus via conventional n-dodecyl-β-D-maltoside solubilization (DM-PSI) and a, to our knowledge, new detergent-free method using styrene-maleic acid copolymers (SMA-PSI) have been investigated by pump-to-probe femtosecond laser spectroscopy. In DM-PSI preparations excited at 740 nm, the excitation remained localized on the long-wavelength chlorophyll forms within 0.1-20 ps and revealed little or no charge separation and oxidation of the special pair, P700. The formation of ion-radical pair P700+A1- occurred with a characteristic time of 36 ps, being kinetically controlled by energy transfer from the long-wavelength chlorophyll to P700. Quite surprisingly, the detergent-free SMA-PSI complexes upon excitation by these long-wave pulses undergo an ultrafast (<100 fs) charge separation in ∼45% of particles. In the remaining complexes (∼55%), the energy transfer to P700 occurred at ∼36 ps, similar to the DM-PSI. Both isolation methods result in a trimeric form of PSI, yet the SMA-PSI complexes display a heterogenous kinetic behavior. The much faster rate of charge separation suggests the existence of an ultrafast pathway for charge separation in the SMA-PSI that may be disrupted during detergent isolation.
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Affiliation(s)
- Dmitry A Cherepanov
- N. N. Semenov Federal Research Center for Chemical Physics, Russian Academy of Sciences, Moscow, Russia
| | - Nathan G Brady
- Biochemistry and Cellular and Molecular Biology Department, University of Tennessee, Knoxville, Tennessee
| | - Ivan V Shelaev
- N. N. Semenov Federal Research Center for Chemical Physics, Russian Academy of Sciences, Moscow, Russia
| | - Jon Nguyen
- Biochemistry and Cellular and Molecular Biology Department, University of Tennessee, Knoxville, Tennessee
| | - Fedor E Gostev
- N. N. Semenov Federal Research Center for Chemical Physics, Russian Academy of Sciences, Moscow, Russia
| | - Mahir D Mamedov
- A. N. Belozersky Institute of Physical-Chemical Biology, Moscow State University, Moscow, Russia
| | - Victor A Nadtochenko
- N. N. Semenov Federal Research Center for Chemical Physics, Russian Academy of Sciences, Moscow, Russia.
| | - Barry D Bruce
- Biochemistry and Cellular and Molecular Biology Department, University of Tennessee, Knoxville, Tennessee; Energy Science & Engineering Program, The Bredesen Center, University of Tennessee, Knoxville, Tennessee.
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28
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Poluektov OG, Niklas J, Utschig LM. Spin-Correlated Radical Pairs as Quantum Sensors of Bidirectional ET Mechanisms in Photosystem I. J Phys Chem B 2019; 123:7536-7544. [DOI: 10.1021/acs.jpcb.9b06636] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/22/2022]
Affiliation(s)
- Oleg G. Poluektov
- Chemical Sciences and Engineering Division, Argonne National Laboratory, 9700 S. Cass Avenue, Lemont, Illinois 60439, United States
| | - Jens Niklas
- Chemical Sciences and Engineering Division, Argonne National Laboratory, 9700 S. Cass Avenue, Lemont, Illinois 60439, United States
| | - Lisa M. Utschig
- Chemical Sciences and Engineering Division, Argonne National Laboratory, 9700 S. Cass Avenue, Lemont, Illinois 60439, United States
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29
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Zamzam N, Kaucikas M, Nürnberg DJ, Rutherford AW, van Thor JJ. Femtosecond infrared spectroscopy of chlorophyll f-containing photosystem I. Phys Chem Chem Phys 2019; 21:1224-1234. [DOI: 10.1039/c8cp05627g] [Citation(s) in RCA: 20] [Impact Index Per Article: 3.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
Abstract
Femtosecond time resolved infrared spectroscopy of far-red light grown photosystem I shows chlorophyll f contributions in light harvesting and charge separation.
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Affiliation(s)
- Noura Zamzam
- Department of Life Sciences
- Imperial College London
- London
- UK
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30
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Lee Y, Gorka M, Golbeck JH, Anna JM. Ultrafast Energy Transfer Involving the Red Chlorophylls of Cyanobacterial Photosystem I Probed through Two-Dimensional Electronic Spectroscopy. J Am Chem Soc 2018; 140:11631-11638. [DOI: 10.1021/jacs.8b04593] [Citation(s) in RCA: 23] [Impact Index Per Article: 3.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 02/05/2023]
Affiliation(s)
- Yumin Lee
- Deparment of Chemistry, University of Pennsylvania, 231 South 34 Street, Philadelphia, Pennsylvania 19104, United States
| | - Michael Gorka
- Department of Biochemistry and Molecular Biology, The Pennsylvania State University, University Park, Pennsylvania 16802, United States
| | - John H. Golbeck
- Department of Biochemistry and Molecular Biology, The Pennsylvania State University, University Park, Pennsylvania 16802, United States
- Department of Chemistry, The Pennsylvania State University, University Park, Pennsylvania 16802, United States
| | - Jessica M. Anna
- Deparment of Chemistry, University of Pennsylvania, 231 South 34 Street, Philadelphia, Pennsylvania 19104, United States
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31
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Makita H, Hastings G. Photosystem I with benzoquinone analogues incorporated into the A 1 binding site. PHOTOSYNTHESIS RESEARCH 2018; 137:85-93. [PMID: 29332243 DOI: 10.1007/s11120-018-0480-5] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 11/27/2017] [Accepted: 01/02/2018] [Indexed: 06/07/2023]
Abstract
Time-resolved FTIR difference spectroscopy has been used to study photosystem I (PSI) particles with three different benzoquinones [plastoquinone-9 (PQ), 2,6-dimethyl-1,4-benzoquinone (DMBQ), 2,3,5,6-tetrachloro-1,4-benzoquinone (Cl4BQ)] incorporated into the A1 binding site. If PSI samples are cooled in the dark to 77 K, the incorporated benzoquinones are shown to be functional, allowing the production of time-resolved (P700+A1--P700A1) FTIR difference spectra. If samples are subjected to repetitive flash illumination at room temperature prior to cooling, however, the time-resolved FTIR difference spectra at 77 K display contributions typical of the P700 triplet state (3P700), indicating a loss of functionality of the incorporated benzoquinones, that occurs because of double protonation of the incorporated benzoquinones. The benzoquinone protonation mechanism likely involves nearby water molecules but does not involve the terminal iron-sulfur clusters FA and FB. These results and conclusions resolve discrepancies between results from previous low-temperature FTIR and EPR studies on similar PSI samples with PQ incorporated.
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Affiliation(s)
- Hiroki Makita
- Department of Physics and Astronomy, Georgia State University, 25 Park Place, Suite 605, Atlanta, GA, 30303, USA
| | - Gary Hastings
- Department of Physics and Astronomy, Georgia State University, 25 Park Place, Suite 605, Atlanta, GA, 30303, USA.
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32
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Shelaev IV, Mamedov MD, Gostev FE, Aybush AV, Li M, Nguyen J, Bruce BD, Nadtochenko VA. Comparisons of Electron Transfer Reactions in a Cyanobacterial Tetrameric and Trimeric Photosystem I Complexes. Photochem Photobiol 2018; 94:564-569. [DOI: 10.1111/php.12886] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/18/2017] [Accepted: 12/05/2017] [Indexed: 11/30/2022]
Affiliation(s)
- Ivan V. Shelaev
- N.N. Semenov Institute of Chemical Physics Russian Academy of Sciences Moscow Russia
| | - Mahir D. Mamedov
- A.N. Belozersky Institute of Physical–Chemical Biology Moscow State University Moscow Russia
| | - Fedor E. Gostev
- N.N. Semenov Institute of Chemical Physics Russian Academy of Sciences Moscow Russia
| | - Arseny V. Aybush
- N.N. Semenov Institute of Chemical Physics Russian Academy of Sciences Moscow Russia
| | - Meng Li
- Department of Biochemistry and Cellular and Molecular Biology University of Tennessee Knoxville TN
- Bredesen Center for Interdisciplinary Research University of Tennessee Knoxville TN
| | - Jonathan Nguyen
- Department of Biochemistry and Cellular and Molecular Biology University of Tennessee Knoxville TN
| | - Barry D. Bruce
- Department of Biochemistry and Cellular and Molecular Biology University of Tennessee Knoxville TN
- Bredesen Center for Interdisciplinary Research University of Tennessee Knoxville TN
- Department of Microbiology University of Tennessee Knoxville TN
| | - Victor A. Nadtochenko
- N.N. Semenov Institute of Chemical Physics Russian Academy of Sciences Moscow Russia
- Moscow Institute of Physics and Technology Dolgoprudny Russia
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33
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Mutations in algal and cyanobacterial Photosystem I that independently affect the yield of initial charge separation in the two electron transfer cofactor branches. BIOCHIMICA ET BIOPHYSICA ACTA-BIOENERGETICS 2018; 1859:42-55. [DOI: 10.1016/j.bbabio.2017.10.003] [Citation(s) in RCA: 8] [Impact Index Per Article: 1.1] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register] [Received: 02/08/2017] [Revised: 10/16/2017] [Accepted: 10/17/2017] [Indexed: 01/02/2023]
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34
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Najdanova M, Gräsing D, Alia A, Matysik J. Analysis of the Electronic Structure of the Special Pair of a Bacterial Photosynthetic Reaction Center by 13 C Photochemically Induced Dynamic Nuclear Polarization Magic-Angle Spinning NMR Using a Double-Quantum Axis. Photochem Photobiol 2017; 94:69-80. [PMID: 28746728 DOI: 10.1111/php.12812] [Citation(s) in RCA: 10] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/24/2017] [Accepted: 07/04/2017] [Indexed: 11/28/2022]
Abstract
The origin of the functional symmetry break in bacterial photosynthesis challenges since several decades. Although structurally very similar, the two branches of cofactors in the reaction center (RC) protein complex act very differently. Upon photochemical excitation, an electron is transported along one branch, while the other remains inactive. Photochemically induced dynamic nuclear polarization (photo-CIDNP) magic-angle spinning (MAS) 13 C NMR revealed that the two bacteriochlorophyll cofactors forming the "Special Pair" donor dimer are already well distinguished in the electronic ground state. These previous studies are relying solely on 13 C-13 C correlation experiments as radio-frequency-driven recoupling (RFDR) and dipolar-assisted rotational resonance (DARR). Obviously, the chemical-shift assignment is difficult in a dimer of tetrapyrrole macrocycles, having eight pyrrole rings of similar chemical shifts. To overcome this problem, an INADEQUATE type of experiment using a POST C7 symmetry-based approach is applied to selectively isotope-labeled bacterial RC of Rhodobacter (R.) sphaeroides wild type (WT). We, therefore, were able to distinguish unresolved sites of the macromolecular dimer. The obtained chemical-shift pattern is in-line with a concentric assembly of negative charge within the common center of the Special Pair supermolecule in the electronic ground state.
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Affiliation(s)
- Marija Najdanova
- Institute of Analytical Chemistry, University of Leipzig, Leipzig, Germany
| | - Daniel Gräsing
- Institute of Analytical Chemistry, University of Leipzig, Leipzig, Germany
| | - A Alia
- Institute of Medical Physics and Biophysics, University of Leipzig, Leipzig, Germany.,Leiden Institute of Chemistry, Leiden University, Leiden, The Netherlands
| | - Jörg Matysik
- Institute of Analytical Chemistry, University of Leipzig, Leipzig, Germany
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35
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Kawashima K, Ishikita H. Structural Factors That Alter the Redox Potential of Quinones in Cyanobacterial and Plant Photosystem I. Biochemistry 2017; 56:3019-3028. [PMID: 28530393 DOI: 10.1021/acs.biochem.7b00082] [Citation(s) in RCA: 16] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
Abstract
Using the cyanobacterial and plant photosystem I (PSI) crystal structures and by considering the protonation states of all titratable residues, redox potentials (Em) of the two phylloquinones-A1A and A1B-were calculated. The calculated Em values were Em(A1A) = -773 mV and Em(A1B) = -818 mV for the plant PSI structure and Em(A1A) = -612 mV and Em(A1B) = -719 mV for the cyanobacterial PSI structure. Our analysis of the PSI crystal structures suggested that the side-chain orientations of Lys-B542 and Gln-B678 in the cyanobacterial crystal structure differ from these side-chain orientations in the plant crystal structure. Quantum mechanical/molecular mechanical calculations indicated that the geometry of the cyanobacterial PSI crystal structure was best described as the conformation where Asp-B575 is protonated and A1A is reduced to A1A•-, which might represent the high-potential A1A form ( Rutherford, A. W., Osyczka, A., Rappaport, F. ( 2012 ) FEBS Lett. 586 , 603 - 616 ). Reorienting the Lys-B542 and Gln-B678 side-chains and rearranging the H-bond pattern of the water cluster near Asp-B575 lowered the Em to Em(A1A) = -718 mV and Em(A1B) = -795 mV. It seems possible that PSI has two conformations: the high-potential A1A form and the low-potential A1A form.
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Affiliation(s)
- Keisuke Kawashima
- Department of Applied Chemistry, The University of Tokyo , 7-3-1 Hongo, Bunkyo-ku, Tokyo 113-8654, Japan
| | - Hiroshi Ishikita
- Department of Applied Chemistry, The University of Tokyo , 7-3-1 Hongo, Bunkyo-ku, Tokyo 113-8654, Japan
- Research Center for Advanced Science and Technology, The University of Tokyo , 4-6-1 Komaba, Meguro-ku, Tokyo 153-8904, Japan
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36
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Dorlhiac GF, Fare C, van Thor JJ. PyLDM - An open source package for lifetime density analysis of time-resolved spectroscopic data. PLoS Comput Biol 2017; 13:e1005528. [PMID: 28531219 PMCID: PMC5460884 DOI: 10.1371/journal.pcbi.1005528] [Citation(s) in RCA: 15] [Impact Index Per Article: 1.9] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/18/2016] [Revised: 06/06/2017] [Accepted: 04/20/2017] [Indexed: 11/21/2022] Open
Abstract
Ultrafast spectroscopy offers temporal resolution for probing processes in the femto- and picosecond regimes. This has allowed for investigation of energy and charge transfer in numerous photoactive compounds and complexes. However, analysis of the resultant data can be complicated, particularly in more complex biological systems, such as photosystems. Historically, the dual approach of global analysis and target modelling has been used to elucidate kinetic descriptions of the system, and the identity of transient species respectively. With regards to the former, the technique of lifetime density analysis (LDA) offers an appealing alternative. While global analysis approximates the data to the sum of a small number of exponential decays, typically on the order of 2-4, LDA uses a semi-continuous distribution of 100 lifetimes. This allows for the elucidation of lifetime distributions, which may be expected from investigation of complex systems with many chromophores, as opposed to averages. Furthermore, the inherent assumption of linear combinations of decays in global analysis means the technique is unable to describe dynamic motion, a process which is resolvable with LDA. The technique was introduced to the field of photosynthesis over a decade ago by the Holzwarth group. The analysis has been demonstrated to be an important tool to evaluate complex dynamics such as photosynthetic energy transfer, and complements traditional global and target analysis techniques. Although theory has been well described, no open source code has so far been available to perform lifetime density analysis. Therefore, we introduce a python (2.7) based package, PyLDM, to address this need. We furthermore provide a direct comparison of the capabilities of LDA with those of the more familiar global analysis, as well as providing a number of statistical techniques for dealing with the regularization of noisy data.
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Affiliation(s)
- Gabriel F. Dorlhiac
- Department of Life Sciences, Faculty of Natural Science, South Kensington Campus, Imperial College London, London, United Kingdom
| | - Clyde Fare
- Department of Life Sciences, Faculty of Natural Science, South Kensington Campus, Imperial College London, London, United Kingdom
- Department of Chemistry, Faculty of Natural Science, South Kensington Campus, Imperial College London, London, United Kingdom
| | - Jasper J. van Thor
- Department of Life Sciences, Faculty of Natural Science, South Kensington Campus, Imperial College London, London, United Kingdom
- * E-mail:
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Szewczyk S, Giera W, D'Haene S, van Grondelle R, Gibasiewicz K. Comparison of excitation energy transfer in cyanobacterial photosystem I in solution and immobilized on conducting glass. PHOTOSYNTHESIS RESEARCH 2017; 132:111-126. [PMID: 27696181 PMCID: PMC5387024 DOI: 10.1007/s11120-016-0312-4] [Citation(s) in RCA: 8] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 03/21/2016] [Accepted: 09/26/2016] [Indexed: 05/21/2023]
Abstract
Excitation energy transfer in monomeric and trimeric forms of photosystem I (PSI) from the cyanobacterium Synechocystis sp. PCC 6803 in solution or immobilized on FTO conducting glass was compared using time-resolved fluorescence. Deposition of PSI on glass preserves bi-exponential excitation decay of ~4-7 and ~21-25 ps lifetimes characteristic of PSI in solution. The faster phase was assigned in part to photochemical quenching (charge separation) of excited bulk chlorophylls and in part to energy transfer from bulk to low-energy (red) chlorophylls. The slower phase was assigned to photochemical quenching of the excitation equilibrated over bulk and red chlorophylls. The main differences between dissolved and immobilized PSI (iPSI) are: (1) the average excitation decay in iPSI is about 11 ps, which is faster by a few ps than for PSI in solution due to significantly faster excitation quenching of bulk chlorophylls by charge separation (~10 ps instead of ~15 ps) accompanied by slightly weaker coupling of bulk and red chlorophylls; (2) the number of red chlorophylls in monomeric PSI increases twice-from 3 in solution to 6 after immobilization-as a result of interaction with neighboring monomers and conducting glass; despite the increased number of red chlorophylls, the excitation decay accelerates in iPSI; (3) the number of red chlorophylls in trimeric PSI is 4 (per monomer) and remains unchanged after immobilization; (4) in all the samples under study, the free energy gap between mean red (emission at ~710 nm) and mean bulk (emission at ~686 nm) emitting states of chlorophylls was estimated at a similar level of 17-27 meV. All these observations indicate that despite slight modifications, dried PSI complexes adsorbed on the FTO surface remain fully functional in terms of excitation energy transfer and primary charge separation that is particularly important in the view of photovoltaic applications of this photosystem.
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Affiliation(s)
- Sebastian Szewczyk
- Department of Physics, Adam Mickiewicz University, ul. Umultowska 85, 61-614, Poznan, Poland
| | - Wojciech Giera
- Department of Physics, Adam Mickiewicz University, ul. Umultowska 85, 61-614, Poznan, Poland
| | - Sandrine D'Haene
- Department of Physics and Astronomy, Vrije Universiteit, De Boelelaan 1081, 1081 HV, Amsterdam, The Netherlands
| | - Rienk van Grondelle
- Department of Physics and Astronomy, Vrije Universiteit, De Boelelaan 1081, 1081 HV, Amsterdam, The Netherlands
| | - Krzysztof Gibasiewicz
- Department of Physics, Adam Mickiewicz University, ul. Umultowska 85, 61-614, Poznan, Poland.
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Kaucikas M, Nürnberg D, Dorlhiac G, Rutherford AW, van Thor JJ. Femtosecond Visible Transient Absorption Spectroscopy of Chlorophyll f-Containing Photosystem I. Biophys J 2017; 112:234-249. [PMID: 28122212 PMCID: PMC5266252 DOI: 10.1016/j.bpj.2016.12.022] [Citation(s) in RCA: 25] [Impact Index Per Article: 3.1] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/25/2016] [Revised: 11/02/2016] [Accepted: 12/01/2016] [Indexed: 01/09/2023] Open
Abstract
Photosystem I (PSI) from Chroococcidiopsis thermalis PCC 7203 grown under far-red light (FRL; >725 nm) contains both chlorophyll a and a small proportion of chlorophyll f. Here, we investigated excitation energy transfer and charge separation using this FRL-grown form of PSI (FRL-PSI). We compared femtosecond transient visible absorption changes of normal, white-light (WL)-grown PSI (WL-PSI) with those of FRL-PSI using excitation at 670 nm, 700 nm, and (in the case of FRL-PSI) 740 nm. The possibility that chlorophyll f participates in energy transfer or charge separation is discussed on the basis of spectral assignments. With selective pumping of chlorophyll f at 740 nm, we observe a final ∼150 ps decay assigned to trapping by charge separation, and the amplitude of the resulting P700+•A1-• charge-separated state indicates that the yield is directly comparable to that of WL-PSI. The kinetics shows a rapid 2 ps time constant for almost complete transfer to chlorophyll f if chlorophyll a is pumped with a wavelength of 670 nm or 700 nm. Although the physical role of chlorophyll f is best supported as a low-energy radiative trap, the physical location should be close to or potentially within the charge-separating pigments to allow efficient transfer for charge separation on the 150 ps timescale. Target models can be developed that include a branching in the formation of the charge separation for either WL-PSI or FRL-PSI.
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Affiliation(s)
- Marius Kaucikas
- Department of Life Sciences, Imperial College London, London, United Kingdom
| | - Dennis Nürnberg
- Department of Life Sciences, Imperial College London, London, United Kingdom
| | - Gabriel Dorlhiac
- Department of Life Sciences, Imperial College London, London, United Kingdom
| | | | - Jasper J. van Thor
- Department of Life Sciences, Imperial College London, London, United Kingdom,Corresponding author
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Dylla NP, Faries KM, Wyllie RM, Swenson AM, Hanson DK, Holten D, Kirmaier C, Laible PD. Species differences in unlocking B‐side electron transfer in bacterial reaction centers. FEBS Lett 2016; 590:2515-26. [DOI: 10.1002/1873-3468.12264] [Citation(s) in RCA: 7] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/20/2016] [Accepted: 06/13/2016] [Indexed: 11/09/2022]
Affiliation(s)
| | | | - Ryan M. Wyllie
- Biosciences Division Argonne National Laboratory Lemont IL USA
| | | | | | - Dewey Holten
- Department of Chemistry Washington University St. Louis MO USA
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Senge MO, MacGowan SA, O'Brien JM. Conformational control of cofactors in nature - the influence of protein-induced macrocycle distortion on the biological function of tetrapyrroles. Chem Commun (Camb) 2016; 51:17031-63. [PMID: 26482230 DOI: 10.1039/c5cc06254c] [Citation(s) in RCA: 148] [Impact Index Per Article: 16.4] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/03/2023]
Abstract
Tetrapyrrole-containing proteins are one of the most fundamental classes of enzymes in nature and it remains an open question to give a chemical rationale for the multitude of biological reactions that can be catalyzed by these pigment-protein complexes. There are many fundamental processes where the same (i.e., chemically identical) porphyrin cofactor is involved in chemically quite distinct reactions. For example, heme is the active cofactor for oxygen transport and storage (hemoglobin, myoglobin) and for the incorporation of molecular oxygen in organic substrates (cytochrome P450). It is involved in the terminal oxidation (cytochrome c oxidase) and the metabolism of H2O2 (catalases and peroxidases) and catalyzes various electron transfer reactions in cytochromes. Likewise, in photosynthesis the same chlorophyll cofactor may function as a reaction center pigment (charge separation) or as an accessory pigment (exciton transfer) in light harvesting complexes (e.g., chlorophyll a). Whilst differences in the apoprotein sequences alone cannot explain the often drastic differences in physicochemical properties encountered for the same cofactor in diverse protein complexes, a critical factor for all biological functions must be the close structural interplay between bound cofactors and the respective apoprotein in addition to factors such as hydrogen bonding or electronic effects. Here, we explore how nature can use the same chemical molecule as a cofactor for chemically distinct reactions using the concept of conformational flexibility of tetrapyrroles. The multifaceted roles of tetrapyrroles are discussed in the context of the current knowledge on distorted porphyrins. Contemporary analytical methods now allow a more quantitative look at cofactors in protein complexes and the development of the field is illustrated by case studies on hemeproteins and photosynthetic complexes. Specific tetrapyrrole conformations are now used to prepare bioengineered designer proteins with specific catalytic or photochemical properties.
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Affiliation(s)
- Mathias O Senge
- School of Chemistry, SFI Tetrapyrrole Laboratory, Trinity Biomedical Sciences Institute, Trinity College Dublin, The University of Dublin, 152-160 Pearse Street, Dublin 2, Ireland and Medicinal Chemistry, Institute of Molecular Medicine, Trinity Centre for Health Sciences, Trinity College Dublin, St. James's Hospital, Dublin 8, Ireland.
| | - Stuart A MacGowan
- School of Chemistry, SFI Tetrapyrrole Laboratory, Trinity Biomedical Sciences Institute, Trinity College Dublin, The University of Dublin, 152-160 Pearse Street, Dublin 2, Ireland
| | - Jessica M O'Brien
- Medicinal Chemistry, Institute of Molecular Medicine, Trinity Centre for Health Sciences, Trinity College Dublin, St. James's Hospital, Dublin 8, Ireland.
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Makita H, Hastings G. Modeling electron transfer in photosystem I. BIOCHIMICA ET BIOPHYSICA ACTA-BIOENERGETICS 2016; 1857:723-33. [DOI: 10.1016/j.bbabio.2016.03.015] [Citation(s) in RCA: 32] [Impact Index Per Article: 3.6] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register] [Received: 12/14/2015] [Revised: 03/13/2016] [Accepted: 03/15/2016] [Indexed: 11/26/2022]
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Najdanova M, Janssen GJ, de Groot HJM, Matysik J, Alia A. Analysis of electron donors in photosystems in oxygenic photosynthesis by photo-CIDNP MAS NMR. JOURNAL OF PHOTOCHEMISTRY AND PHOTOBIOLOGY B-BIOLOGY 2015; 152:261-71. [PMID: 26282679 DOI: 10.1016/j.jphotobiol.2015.08.001] [Citation(s) in RCA: 12] [Impact Index Per Article: 1.2] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 06/08/2015] [Revised: 08/04/2015] [Accepted: 08/05/2015] [Indexed: 10/23/2022]
Abstract
Both photosystem I and photosystem II are considerably similar in molecular architecture but they operate at very different electrochemical potentials. The origin of the different redox properties of these RCs is not yet clear. In recent years, insight was gained into the electronic structure of photosynthetic cofactors through the application of photochemically induced dynamic nuclear polarization (photo-CIDNP) with magic-angle spinning NMR (MAS NMR). Non-Boltzmann populated nuclear spin states of the radical pair lead to strongly enhanced signal intensities that allow one to observe the solid-state photo-CIDNP effect from both photosystem I and II from isolated reaction center of spinach (Spinacia oleracea) and duckweed (Spirodela oligorrhiza) and from the intact cells of the cyanobacterium Synechocystis by (13)C and (15)N MAS NMR. This review provides an overview on the photo-CIDNP MAS NMR studies performed on PSI and PSII that provide important ingredients toward reconstruction of the electronic structures of the donors in PSI and PSII.
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Affiliation(s)
- M Najdanova
- University of Leipzig, Institute of Analytical Chemistry, Johannisallee 29, D-04103 Leipzig, Germany
| | - G J Janssen
- University of Leiden, Leiden Institute of Chemistry, Einsteinweg 55, P.O. Box 9502, 2300 RA Leiden, The Netherlands
| | - H J M de Groot
- University of Leiden, Leiden Institute of Chemistry, Einsteinweg 55, P.O. Box 9502, 2300 RA Leiden, The Netherlands
| | - J Matysik
- University of Leipzig, Institute of Analytical Chemistry, Johannisallee 29, D-04103 Leipzig, Germany
| | - A Alia
- University of Leiden, Leiden Institute of Chemistry, Einsteinweg 55, P.O. Box 9502, 2300 RA Leiden, The Netherlands; University of Leipzig, Institute of Medical Physics and Biophysics, Härtelstr. 16-18, D-04107 Leipzig, Germany.
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Mamedov M, Nadtochenko V, Semenov A. Primary electron transfer processes in photosynthetic reaction centers from oxygenic organisms. PHOTOSYNTHESIS RESEARCH 2015; 125:51-63. [PMID: 25648636 DOI: 10.1007/s11120-015-0088-y] [Citation(s) in RCA: 74] [Impact Index Per Article: 7.4] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 10/17/2014] [Accepted: 01/12/2015] [Indexed: 05/22/2023]
Abstract
This minireview is written in honor of Vladimir A. Shuvalov, a pioneer in the area of primary photochemistry of both oxygenic and anoxygenic photosyntheses (See a News Report: Allakhverdiev et al. 2014). In the present paper, we describe the current state of the formation of the primary and secondary ion-radical pairs within photosystems (PS) II and I in oxygenic organisms. Spectral-kinetic studies of primary events in PS II and PS I, upon excitation by ~20 fs laser pulses, are now available and reviewed here; for PS II, excitation was centered at 710 nm, and for PS I, it was at 720 nm. In PS I, conditions were chosen to maximally increase the relative contribution of the direct excitation of the reaction center (RC) in order to separate the kinetics of the primary steps of charge separation in the RC from that of the excitation energy transfer in the antenna. Our results suggest that the sequence of the primary electron transfer reactions is P680 → ChlD1 → PheD1 → QA (PS II) and P700 → A 0A/A 0B → A 1A/A 1B (PS I). However, alternate routes of charge separation in PS II, under different excitation conditions, are not ruled out.
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Affiliation(s)
- Mahir Mamedov
- A.N. Belozersky Institute of Physical-Chemical Biology, Moscow State University, 119991, Moscow, Russia,
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Tongra T, Jajoo A. Investigating changes in the redox state of Photosystem I at low pH. JOURNAL OF PHOTOCHEMISTRY AND PHOTOBIOLOGY B-BIOLOGY 2015; 151:25-30. [PMID: 26151897 DOI: 10.1016/j.jphotobiol.2015.06.021] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.1] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 05/16/2015] [Revised: 06/30/2015] [Accepted: 06/30/2015] [Indexed: 11/29/2022]
Abstract
Changes in the redox state of Photosystem I (PSI) were studied in spinach leaf discs suspended in buffers of different pH (pH 7.5, 6.5, 5.5 and 4.5). By measuring absorbance changes at 820 nm, it was observed that under normal conditions, the electrons were supplied by Photosystem II (PSII) for the photo-oxidation of P700 while in the presence of DCMU when electrons coming from PSII are blocked, cyclic electron flow (CEF) around PSI was the major source for the absorbance changes observed at 820 nm. This was supported by complete inhibition in the reduction of both single turnover (ST) area and multiple turnover (MT) area, in the presence of DCMU, which is generally filled up by the electrons coming from PSII. In the absence of DCMU, the intersystem electron pool or plastoquinone (PQ) pool was increased at low pH which was probably due to enhanced cyclic electron flow around PSI. Our results also suggest that at low pH, in the absence of DCMU, the major contribution for faster dark re-reduction of P700(+) is attributed mainly by PSII and CEF PSI while in the presence of DCMU, the significant contribution is provided by CEF PSI and other stromal components.
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Affiliation(s)
- Teena Tongra
- School of Life Science, Devi Ahilya University, Indore 452017, M.P., India
| | - Anjana Jajoo
- School of Life Science, Devi Ahilya University, Indore 452017, M.P., India.
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Semenov AY, Petrova AA, Mamedov MD, Nadtochenko VA. Electron transfer in photosystem I containing native and modified quinone acceptors. BIOCHEMISTRY (MOSCOW) 2015; 80:654-61. [DOI: 10.1134/s0006297915060024] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.1] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 11/22/2022]
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Le Quiniou C, Tian L, Drop B, Wientjes E, van Stokkum IHM, van Oort B, Croce R. PSI-LHCI of Chlamydomonas reinhardtii: Increasing the absorption cross section without losing efficiency. BIOCHIMICA ET BIOPHYSICA ACTA 2015; 1847:458-467. [PMID: 25681242 PMCID: PMC4547092 DOI: 10.1016/j.bbabio.2015.02.001] [Citation(s) in RCA: 42] [Impact Index Per Article: 4.2] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 12/02/2014] [Revised: 01/28/2015] [Accepted: 02/02/2015] [Indexed: 11/28/2022]
Abstract
Photosystem I (PSI) is an essential component of photosynthetic membranes. Despite the high sequence and structural homologies, its absorption properties differ substantially in algae, plants and cyanobacteria. In particular it is characterized by the presence of low-energy chlorophylls (red forms), the number and the energy of which vary in different organisms. The PSI-LHCI (PSI-light harvesting complex I) complex of the green alga Chlamydomonas reinhardtii (C.r.) is significantly larger than that of plants, containing five additional light-harvesting complexes (together binding≈65 chlorophylls), and contains red forms with higher energy than plants. To understand how these differences influence excitation energy transfer and trapping in the system, we studied two PSI-LHCI C.r. particles, differing in antenna size and red-form content, using time-resolved fluorescence and compared them to plant PSI-LHCI. The excited state kinetics in C.r. shows the same average lifetime (50 ps) as in plants suggesting that the effect of antenna enlargement is compensated by higher energy red forms. The system equilibrates very fast, indicating that all Lhcas are well-connected, despite their long distance to the core. The differences between C.r. PSI-LHCI with and without Lhca2 and Lhca9 show that these Lhcas bind red forms, although not the red-most. The red-most forms are in (or functionally close to) other Lhcas and slow down the trapping, but hardly affect the quantum efficiency, which remains as high as 97% even in a complex that contains 235 chlorophylls.
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Affiliation(s)
- Clotilde Le Quiniou
- Department of Physics and Astronomy, Faculty of Sciences, VU University Amsterdam, Institute for Lasers, Life and Biophotonics Amsterdam, LaserLaB Amsterdam, De Boelelaan 1081, 1081 HV Amsterdam, The Netherlands
| | - Lijin Tian
- Department of Physics and Astronomy, Faculty of Sciences, VU University Amsterdam, Institute for Lasers, Life and Biophotonics Amsterdam, LaserLaB Amsterdam, De Boelelaan 1081, 1081 HV Amsterdam, The Netherlands
| | - Bartlomiej Drop
- Department of Physics and Astronomy, Faculty of Sciences, VU University Amsterdam, Institute for Lasers, Life and Biophotonics Amsterdam, LaserLaB Amsterdam, De Boelelaan 1081, 1081 HV Amsterdam, The Netherlands
| | - Emilie Wientjes
- Department of Physics and Astronomy, Faculty of Sciences, VU University Amsterdam, Institute for Lasers, Life and Biophotonics Amsterdam, LaserLaB Amsterdam, De Boelelaan 1081, 1081 HV Amsterdam, The Netherlands
| | - Ivo H M van Stokkum
- Department of Physics and Astronomy, Faculty of Sciences, VU University Amsterdam, Institute for Lasers, Life and Biophotonics Amsterdam, LaserLaB Amsterdam, De Boelelaan 1081, 1081 HV Amsterdam, The Netherlands
| | - Bart van Oort
- Department of Physics and Astronomy, Faculty of Sciences, VU University Amsterdam, Institute for Lasers, Life and Biophotonics Amsterdam, LaserLaB Amsterdam, De Boelelaan 1081, 1081 HV Amsterdam, The Netherlands
| | - Roberta Croce
- Department of Physics and Astronomy, Faculty of Sciences, VU University Amsterdam, Institute for Lasers, Life and Biophotonics Amsterdam, LaserLaB Amsterdam, De Boelelaan 1081, 1081 HV Amsterdam, The Netherlands.
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Peterson RB, Oja V, Eichelmann H, Bichele I, Dall'Osto L, Laisk A. Fluorescence F 0 of photosystems II and I in developing C3 and C 4 leaves, and implications on regulation of excitation balance. PHOTOSYNTHESIS RESEARCH 2014; 122:41-56. [PMID: 24817180 DOI: 10.1007/s11120-014-0009-5] [Citation(s) in RCA: 8] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 06/03/2013] [Accepted: 04/24/2014] [Indexed: 05/12/2023]
Abstract
This work addresses the question of occurrence and function of photosystem II (PSII) in bundle sheath (BS) cells of leaves possessing NADP-malic enzyme-type C4 photosynthesis (Zea mays). Although no requirement for PSII activity in the BS has been established, several component proteins of PSII have been detected in BS cells of developing maize leaves exhibiting O2-insensitive photosynthesis. We used the basal fluorescence emissions of PSI (F 0I) and PSII (F 0II) as quantitative indicators of the respective relative photosystem densities. Chl fluorescence induction was measured simultaneously at 680 and 750 nm. In mature leaves, the F m(680)/F 0(680) ratio was 10.5 but less in immature leaves. We propose that the lower ratio was caused by the presence of a distinct non-variable component, F c, emitting at 680 and 750 nm. After F c was subtracted, the fluorescence of PSI (F 0I) was detected as a non-variable component at 750 nm and was undetectably low at 680 nm. Contents of Chls a and b were measured in addition to Chl fluorescence. The Chl b/(a + b) was relatively stable in developing sunflower leaves (0.25-0.26), but in maize it increased from 0.09 to 0.21 with leaf tissue age. In sunflower, the F 0I/(F 0I + F 0II) was 0.39 ± 0.01 independent of leaf age, but in maize, this parameter was 0.65 in young tissue of very low Chl content (20-50 mg m(-2)) falling to a stable level of 0.53 ± 0.01 at Chl contents >100 mg m(-2). The values of F 0I/(F 0I + F 0II) showed that in sunflower, excitation was partitioned between PSII and PSI in a ratio of 2:1, but the same ratio was 1:1 in the C4 plant. The latter is consistent with a PSII:PSI ratio of 2:1 in maize mesophyll cells and PSI only in BS cells (2:1:1 distribution). We suggest, moreover, that redox mediation of Chl synthesis, rather than protein accumulation, regulates photosystem assembly to ensure optimum excitation balance between functional PSII and PSI. Indeed, the apparent necessity for two Chls (a and b) may reside in their targeted functions in influencing accumulation of PSI and PSII, respectively, as opposed to their spectral differences.
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Affiliation(s)
- Richard B Peterson
- Department of Biochemistry and Genetics, The Connecticut Agricultural Experiment Station, 123 Huntington St., New Haven, CT, 06511, USA,
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Tikhonov AN. The cytochrome b6f complex at the crossroad of photosynthetic electron transport pathways. PLANT PHYSIOLOGY AND BIOCHEMISTRY : PPB 2014; 81:163-83. [PMID: 24485217 DOI: 10.1016/j.plaphy.2013.12.011] [Citation(s) in RCA: 121] [Impact Index Per Article: 11.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 09/26/2013] [Accepted: 12/11/2013] [Indexed: 05/03/2023]
Abstract
Regulation of photosynthetic electron transport at the level of the cytochrome b6f complex provides efficient performance of the chloroplast electron transport chain (ETC). In this review, after brief overview of the structural organization of the chloroplast ETC, the consideration of the problem of electron transport control is focused on the plastoquinone (PQ) turnover and its interaction with the b6f complex. The data available show that the rates of plastoquinol (PQH2) formation in PSII and its diffusion to the b6f complex do not limit the overall rate of electron transfer between photosystem II (PSII) and photosystem I (PSI). Analysis of experimental and theoretical data demonstrates that the rate-limiting step in the intersystem chain of electron transport is determined by PQH2 oxidation at the Qo-site of the b6f complex, which is accompanied by the proton release into the thylakoid lumen. The acidification of the lumen causes deceleration of PQH2 oxidation, thus impeding the intersystem electron transport. Two other mechanisms of regulation of the intersystem electron transport have been considered: (i) "state transitions" associated with the light-induced redistribution of solar energy between PSI and PSII, and (ii) redistribution of electron fluxes between alternative pathways (noncyclic electron transport and cyclic electron flow around PSI).
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