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For: Bergero R, Forrest A, Charlesworth D. Active miniature transposons from a plant genome and its nonrecombining Y chromosome. Genetics 2008;178:1085-92. [PMID: 18245352 DOI: 10.1534/genetics.107.081745] [Citation(s) in RCA: 28] [Impact Index Per Article: 1.6] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/18/2022]  Open
Number Cited by Other Article(s)
1
Wang Y, Gong GN, Wang Y, Zhang RG, Hörandl E, Zhang ZX, Charlesworth D, He L. Gap-free X and Y chromosome assemblies of Salix arbutifolia reveal an evolutionary change from male to female heterogamety in willows, without a change in the position of the sex-determining locus. THE NEW PHYTOLOGIST 2024;242:2872-2887. [PMID: 38581199 DOI: 10.1111/nph.19744] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 11/16/2023] [Accepted: 03/21/2024] [Indexed: 04/08/2024]
2
Bačovský V, Čegan R, Šimoníková D, Hřibová E, Hobza R. The Formation of Sex Chromosomes in Silene latifolia and S. dioica Was Accompanied by Multiple Chromosomal Rearrangements. FRONTIERS IN PLANT SCIENCE 2020;11:205. [PMID: 32180787 PMCID: PMC7059608 DOI: 10.3389/fpls.2020.00205] [Citation(s) in RCA: 5] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 10/07/2019] [Accepted: 02/11/2020] [Indexed: 05/02/2023]
3
Bačovský V, Houben A, Kumke K, Hobza R. The distribution of epigenetic histone marks differs between the X and Y chromosomes in Silene latifolia. PLANTA 2019;250:487-494. [PMID: 31069521 DOI: 10.1007/s00425-019-03182-7] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 02/26/2019] [Accepted: 05/03/2019] [Indexed: 05/18/2023]
4
Puterova J, Kubat Z, Kejnovsky E, Jesionek W, Cizkova J, Vyskot B, Hobza R. The slowdown of Y chromosome expansion in dioecious Silene latifolia due to DNA loss and male-specific silencing of retrotransposons. BMC Genomics 2018;19:153. [PMID: 29458354 PMCID: PMC5819184 DOI: 10.1186/s12864-018-4547-7] [Citation(s) in RCA: 16] [Impact Index Per Article: 2.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/09/2017] [Accepted: 02/13/2018] [Indexed: 11/10/2022]  Open
5
Chromosome Evolution in Connection with Repetitive Sequences and Epigenetics in Plants. Genes (Basel) 2017;8:genes8100290. [PMID: 29064432 PMCID: PMC5664140 DOI: 10.3390/genes8100290] [Citation(s) in RCA: 55] [Impact Index Per Article: 6.9] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/10/2017] [Revised: 10/16/2017] [Accepted: 10/18/2017] [Indexed: 01/18/2023]  Open
6
Charlesworth et al. on Background Selection and Neutral Diversity. Genetics 2017;204:829-832. [PMID: 28114095 DOI: 10.1534/genetics.116.196170] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/18/2022]  Open
7
Bhowmick BK, Jha S. Dynamics of sex expression and chromosome diversity in Cucurbitaceae: a story in the making. J Genet 2016;94:793-808. [PMID: 26690537 DOI: 10.1007/s12041-015-0562-5] [Citation(s) in RCA: 13] [Impact Index Per Article: 1.4] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/11/2022]
8
Li SF, Zhang GJ, Yuan JH, Deng CL, Gao WJ. Repetitive sequences and epigenetic modification: inseparable partners play important roles in the evolution of plant sex chromosomes. PLANTA 2016;243:1083-95. [PMID: 26919983 DOI: 10.1007/s00425-016-2485-7] [Citation(s) in RCA: 41] [Impact Index Per Article: 4.6] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 01/30/2016] [Accepted: 02/07/2016] [Indexed: 05/03/2023]
9
Hossain MU, Islam M, Afroz M, Sultana SS, Alam SS. Karyotype and RAPD Analysis of Male and Female <i>Coccinia grandis</i> L. from Bangladesh. CYTOLOGIA 2016. [DOI: 10.1508/cytologia.81.349] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/16/2022]
10
Bhowmick BK, Yamamoto M, Jha S. Chromosomal localization of 45S rDNA, sex-specific C values, and heterochromatin distribution in Coccinia grandis (L.) Voigt. PROTOPLASMA 2016;253:201-209. [PMID: 25795278 DOI: 10.1007/s00709-015-0797-2] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 01/05/2015] [Accepted: 03/05/2015] [Indexed: 06/04/2023]
11
Identifying new sex-linked genes through BAC sequencing in the dioecious plant Silene latifolia. BMC Genomics 2015. [PMID: 26223308 PMCID: PMC4520012 DOI: 10.1186/s12864-015-1698-7] [Citation(s) in RCA: 22] [Impact Index Per Article: 2.2] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/15/2022]  Open
12
Genetics of dioecy and causal sex chromosomes in plants. J Genet 2015;93:241-77. [PMID: 24840848 DOI: 10.1007/s12041-014-0326-7] [Citation(s) in RCA: 14] [Impact Index Per Article: 1.4] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/25/2022]
13
Castric V, Billiard S, Vekemans X. Trait transitions in explicit ecological and genomic contexts: plant mating systems as case studies. ADVANCES IN EXPERIMENTAL MEDICINE AND BIOLOGY 2014;781:7-36. [PMID: 24277293 DOI: 10.1007/978-94-007-7347-9_2] [Citation(s) in RCA: 6] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 02/17/2023]
14
Bergero R, Qiu S, Forrest A, Borthwick H, Charlesworth D. Expansion of the pseudo-autosomal region and ongoing recombination suppression in the Silene latifolia sex chromosomes. Genetics 2013;194:673-86. [PMID: 23733786 PMCID: PMC3697972 DOI: 10.1534/genetics.113.150755] [Citation(s) in RCA: 59] [Impact Index Per Article: 4.9] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/26/2013] [Accepted: 04/20/2013] [Indexed: 11/18/2022]  Open
15
Testing for the footprint of sexually antagonistic polymorphisms in the pseudoautosomal region of a plant sex chromosome pair. Genetics 2013;194:663-72. [PMID: 23733787 DOI: 10.1534/genetics.113.152397] [Citation(s) in RCA: 43] [Impact Index Per Article: 3.6] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/18/2022]  Open
16
Charlesworth D. Plant sex chromosome evolution. JOURNAL OF EXPERIMENTAL BOTANY 2013;64:405-20. [PMID: 23125359 DOI: 10.1093/jxb/ers322] [Citation(s) in RCA: 105] [Impact Index Per Article: 8.8] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/03/2023]
17
Sousa A, Fuchs J, Renner SS. Molecular cytogenetics (FISH, GISH) of Coccinia grandis : a ca. 3 myr-old species of cucurbitaceae with the largest Y/autosome divergence in flowering plants. Cytogenet Genome Res 2012. [PMID: 23207224 DOI: 10.1159/000345370] [Citation(s) in RCA: 51] [Impact Index Per Article: 3.9] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/19/2022]  Open
18
Wang J, Na JK, Yu Q, Gschwend AR, Han J, Zeng F, Aryal R, VanBuren R, Murray JE, Zhang W, Navajas-Pérez R, Feltus FA, Lemke C, Tong EJ, Chen C, Man Wai C, Singh R, Wang ML, Min XJ, Alam M, Charlesworth D, Moore PH, Jiang J, Paterson AH, Ming R. Sequencing papaya X and Yh chromosomes reveals molecular basis of incipient sex chromosome evolution. Proc Natl Acad Sci U S A 2012;109:13710-5. [PMID: 22869747 PMCID: PMC3427123 DOI: 10.1073/pnas.1207833109] [Citation(s) in RCA: 209] [Impact Index Per Article: 16.1] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/03/2023]  Open
19
Muyle A, Zemp N, Deschamps C, Mousset S, Widmer A, Marais GAB. Rapid de novo evolution of X chromosome dosage compensation in Silene latifolia, a plant with young sex chromosomes. PLoS Biol 2012;10:e1001308. [PMID: 22529744 PMCID: PMC3328428 DOI: 10.1371/journal.pbio.1001308] [Citation(s) in RCA: 124] [Impact Index Per Article: 9.5] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/22/2011] [Accepted: 03/01/2012] [Indexed: 11/18/2022]  Open
20
Cegan R, Vyskot B, Kejnovsky E, Kubat Z, Blavet H, Šafář J, Doležel J, Blavet N, Hobza R. Genomic diversity in two related plant species with and without sex chromosomes--Silene latifolia and S. vulgaris. PLoS One 2012;7:e31898. [PMID: 22393373 PMCID: PMC3290532 DOI: 10.1371/journal.pone.0031898] [Citation(s) in RCA: 18] [Impact Index Per Article: 1.4] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/30/2011] [Accepted: 01/16/2012] [Indexed: 01/25/2023]  Open
21
Kofler R, Betancourt AJ, Schlötterer C. Sequencing of pooled DNA samples (Pool-Seq) uncovers complex dynamics of transposable element insertions in Drosophila melanogaster. PLoS Genet 2012;8:e1002487. [PMID: 22291611 PMCID: PMC3266889 DOI: 10.1371/journal.pgen.1002487] [Citation(s) in RCA: 148] [Impact Index Per Article: 11.4] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/06/2011] [Accepted: 12/01/2011] [Indexed: 12/16/2022]  Open
22
Recipient of the 2011 Molecular Ecology Prize: Deborah Charlesworth. Mol Ecol 2011;21:23-5. [DOI: 10.1111/j.1365-294x.2011.05385.x] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.1] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/27/2022]
23
Muir G, Bergero R, Charlesworth D, Filatov DA. Does local adaptation cause high population differentiation of Silene latifolia Y chromosomes? Evolution 2011;65:3368-80. [PMID: 22133212 DOI: 10.1111/j.1558-5646.2011.01410.x] [Citation(s) in RCA: 11] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/01/2022]
24
Hikosaka A, Nishimura K, Hikosaka-Katayama T, Kawahara A. Recent transposition activity of Xenopus T2 family miniature inverted-repeat transposable elements. Mol Genet Genomics 2011;285:219-24. [PMID: 21234602 DOI: 10.1007/s00438-010-0599-3] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/29/2010] [Accepted: 12/27/2010] [Indexed: 10/18/2022]
25
Oyama RK, Silber MV, Renner SS. A specific insertion of a solo-LTR characterizes the Y-chromosome of Bryonia dioica (Cucurbitaceae). BMC Res Notes 2010;3:166. [PMID: 20546563 PMCID: PMC2898664 DOI: 10.1186/1756-0500-3-166] [Citation(s) in RCA: 11] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/19/2010] [Accepted: 06/14/2010] [Indexed: 11/24/2022]  Open
26
Lockton S, Gaut BS. The evolution of transposable elements in natural populations of self-fertilizing Arabidopsis thaliana and its outcrossing relative Arabidopsis lyrata. BMC Evol Biol 2010;10:10. [PMID: 20067644 PMCID: PMC2837042 DOI: 10.1186/1471-2148-10-10] [Citation(s) in RCA: 62] [Impact Index Per Article: 4.1] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/14/2009] [Accepted: 01/12/2010] [Indexed: 12/02/2022]  Open
27
The role of repetitive DNA in structure and evolution of sex chromosomes in plants. Heredity (Edinb) 2009;102:533-41. [PMID: 19277056 DOI: 10.1038/hdy.2009.17] [Citation(s) in RCA: 104] [Impact Index Per Article: 6.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/07/2023]  Open
28
The evolution of plant genomes: scaling up from a population perspective. Curr Opin Genet Dev 2009;18:565-70. [PMID: 19131240 DOI: 10.1016/j.gde.2008.11.005] [Citation(s) in RCA: 26] [Impact Index Per Article: 1.6] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/22/2008] [Revised: 11/14/2008] [Accepted: 11/18/2008] [Indexed: 02/02/2023]
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