Genetic parameters and relationships between growth traits and scrotal circumference measured at different ages in Nellore cattle

Considerations for Using Natural Service with Estrous Synchronization Programs

Estrous synchronization, coupled with natural service, provides the benefit of female cows conceiving early, but there are an increased number of females expressing estrus in a short period of time. Thus, considerations need to be made for the bull. Select a protocol that will distribute estrus over a longer period of time and ensure bulls pass a breeding soundness examination. Mature bulls (3 years old or older) have increased efficiency in getting cows pregnant compared with younger bulls; therefore, a ratio of 1 mature bull to 25 cows is a good recommendation within an estrous synchronized herd.

Genetic Parameters for Growth, Ultrasound and Carcass Traits in New Zealand Beef Cattle and Their Correlations with Maternal Performance

Research has shown that enhancing finishing performance in beef cows is feasible; however, any adverse impact of selection strategies for finishing performance on the performance of the maternal herd should be taken into account. The aim of this research was to examine the inheritance of growth, ultrasound and carcass traits in finishing beef cattle and to evaluate their correlations with maternal performance traits. Data were collected from a nationwide progeny test on commercial New Zealand hill country farms comprising a total of 4473 beef cows and their progeny. Most finishing traits were moderately to highly heritable (0.28–0.58) with the exception of meat or fat colour and ossification (0.00–0.12). Ultrasound scan traits had high genetic correlations with corresponding traits measured at slaughter (rg = 0.53–0.95) and may be used as a selection tool for improved genetic merit of the beef carcass. Fat content determined via ultrasound scanning in the live animal or at slaughter in finishing cattle is positively genetically correlated with rebreeding performance (rg = 0.22–0.39) in female herd replacements and negatively correlated with mature cow live weight (rg = −0.40 to −0.19). Low-magnitude associations were observed between the genetic merit for carcass fat traits with body condition in mature cows.

Genetic analysis of growth, visual scores, height, and carcass traits in Nelore cattle

Covariance components were estimated for growth traits (BW, birth weight; WW, weaning weight; YW, yearling weight), visual scores (BQ, breed quality; CS, conformation; MS, muscling; NS, navel; PS, finishing precocity), hip height (HH), and carcass traits (BF, backfat thickness; LMA, longissimus muscle area) measured at yearling. Genetic gains were obtained and validation models on direct and maternal effects for BW and WW were fitted. Genetic correlations of growth traits with CS, PS, MS, and HH ranged from 0.20 ± 0.01 to 0.94 ± 0.01 and were positive and low with NS (0.11 ± 0.01 to 0.20 ± 0.01) and favorable with BQ (0.14 ± 0.02 to 0.37 ± 0.02). Null to moderate genetic correlations were obtained between growth and carcass traits. Genetic gains were positive and significant, except for BW. An increase of 0.76 and 0.72 kg is expected for BW and WW, respectively, per unit increase in estimated breeding value (EBV) for direct effect and an additional 0.74 and 1.43, respectively, kg per unit increase in EBV for the maternal effect. Monitoring genetic gains for HH and NS is relevant to maintain an adequate body size and a navel morphological correction, if necessary. Simultaneous selection for growth, morphological, and carcass traits in line with improve maternal performance is a feasible strategy to increase herd productivity.

Evaluation and prediction of scrotal circumference in beef bulls

Scrotal circumference (SC) is considered a useful tool for predicting age at puberty and is performed to improve the reproductive performance in beef cattle industry. We aimed to fit several nonlinear mixed models for SC measurements of five different breeds to better predict testicular growth. Data of SC (cm), body weight (BW; kg), and age (A; days), farm location, sire and dam, and birth dates of 169,094 beef bulls were collected from five breeds: Nelore (N) (n = 110,814); Angus (AA) (n = 6541); Brangus (BA) (n = 42,910); Polled Hereford and Hereford (HH) (n = 4640); and Braford (BH) (n = 7480). Data comprise a total of 8640 sires and 115,172 dams and grouped in 2908 contemporary groups (CG). The full model development for SC was defined as: SC = CG + A + A*A + BW + BW*BW + Ɛ. Bulls from HH (34.1 ± 3.2) and AA (33.5 ± 3.0) had the highest value of SC, followed by BH (32.2 ± 3.7), BA (30.6 ± 4.1), and N (26.9 ± 3.6). There was a curvilinear effect of BW on the SC measurements of HH and AA bulls, reaching the maximum point around 600 kg, whether both breeds presented a similar testicular growth pattern. In British breeds, inflection points of average daily SC growth of 0.039 and 0.042 cm/kg were obtained from 700 kg HH and 600 kg AA bulls, respectively. Scrotal circumference values of 0.042 and 0.046 cm/kg reaching the maximum growth point at 450 kg BW were obtained for BH and BA bulls, respectively. We also observed SC values of 0.044 and 0.048 cm/d reaching the maximum growth point at 550 d of age for BH and BA bulls, respectively. Thus, estimate testicular size at maturity should be measured between 500 and 600 kg BW in British genotypes and between 550 and 600 d in Bos indicus and crossbreeds animals. Therefore, SC adjustment can be used by breed-specific criteria associated with BW and/or age to determine testis growth as a selection criterion in beef cattle breeding programs.

Genetic correlations between body weight, scrotal circumference and visual evaluation scores in Bos indicus cattle

The objective was to estimate genetic correlations between body weight (BW), scrotal circumference and visual evaluation scores of body conformation measured at standard ages in Guzerat cattle. All measurements were performed at 205 (weaning age), 365, 450 and 550 days of age; for BW, two additional measurements (at birth and 120 days of age) were realized. The data utilized in this study were retrieved from a database of the Brazilian Association of Zebu Breeders that contained information of registered Guzerat animals born between 1970 and 2013. Genetic parameters were estimated in bi-trait analyses by using Bayesian inference. Genetic correlations between BW at 205 and 450 days of age with other traits were high and positive, whereas the correlations between visual evaluation scores with other traits were moderate. Based on correlations herein obtained, we conclude that selection based on BW results in increased visual scores and scrotal circumference, leading to improvements in productive performance and animals with best body conformation.

Genetic evaluation of bodyweight, scrotal circumference, and visual appraisal scores in Bos indicus cattle

Our objective was to estimate genetic parameters, and genetic and phenotypic trends for bodyweight (BW; measured at birth, 120, 205 (weaning age), 365, 450 and 550 days of age), scrotal circumference, and visual appraisal scores of body conformation in Guzerat cattle. Data regarding body structure, finishing precocity, muscling, sheath and navel, breed characteristics, limbs (soundness of feet and legs), and sexuality, which were visually appraised, were obtained from the Brazilian Association of Zebu Breeders, recorded between 1970 and 2013 in five Brazilian states. Variance components and heritability were estimated by using linear animal (for continuous variables) and threshold (for categorical variables) models using Bayesian inference. Genetic and phenotypic trends were obtained by regressing the average annual genetic value relative to animal’s birth year. The direct heritability values for BW were high, ranging from 0.38 to 0.45, whereas the maternal effect was responsible for 17–23% of the phenotypic variation. For scrotal circumference, the direct heritability values were median with values ranging from 0.08 and 0.15, whereas for visual appraisal scores, the values were median to high (0.07–0.18). Higher response to selection for BW traits is expected for those with moderate to high heritabilities. The estimated genetic trends indicated favourable changes for BW with average annual changes of 396, 2948, 3388, 5808, 8184, and 8096 g for BW at the respective ages. The genetic values were decreasing over the years for scrotal circumference, body structure, finishing precocity, muscling, and sheath and navel. Therefore, a longer evaluation period should be utilised to assess these traits as little time has elapsed from the beginning of the selection until the time of the present study.

Genetic analyses on bodyweight, reproductive, and carcass traits in composite beef cattle

In beef cattle, growth, reproductive, and carcass traits have been studied for improving productivity and quality of meat products. The aim of this study was to estimate genetic parameters for birth (BW), weaning (WW) and yearling (YW) weights, scrotal circumferences at weaning (SCW) and yearling (SCY), age at first calving (AFC), ribeye area (REA) and back fat thickness (BFT) in order to provide support for the evaluation program of the composite Canchim breed. Data on 12 967 (BW), 7481 (WW), 5131 (YW), 1447 (SCW), 1224 (SCY), 1400 (AFC), and 2082 (REA and BFT) animals were analysed using the Average Information Restricted Maximum Likelihood method under an animal model (single and multi-trait analyses). A substantial proportion of the variation in the bodyweights, scrotal circumferences and carcass traits was associated with the additive genetic term indicating that these traits may respond to the selection process. For AFC, a low heritability estimate was observed. Genetic correlations among bodyweights varied from 0.41 to 0.93. The genetic correlation among scrotal circumferences was 0.91. Important genetic correlations among YW, SCW, and SCY with AFC were observed (–0.48, –0.61, and –0.71, respectively), indicating that indirect responses to selection for these traits would be expected in the age of which the heifers calve. Furthermore, BFT presented an interesting result with calving performance due to the genetic correlation (–0.69) with AFC. Post-weaning weights showed moderate genetic correlations with REA. Many of the traits considered in the genetic evaluation of this breed are genetically correlated in a favourable manner. Genetic improvement through selection is expected for production, reproduction, and carcass traits in Canchim beef cattle.

Parameter estimates for reproductive and carcass traits in Nelore beef cattle

The aim of this study was to estimate genetic parameters for scrotal circumference at 365 (SC365) and 450 (SC450) days of age, age at first calving (AFC), ribeye area (REA), backfat (BF) thickness, and rump fat (RF) thickness, in order to provide information on potential traits for Nelore cattle breeding program. Genetic parameters were estimated using the Average Information Restricted Maximum Likelihood method in single- and multitrait analyses. Four different animal models were tested for SC365, SC450, REA, BF, and RF in single-trait analyses. For SC365 and SC450, the maternal genetic effect was statistically significant (P < 0.01) and was included for multitrait analyses. The direct heritability estimates for SC365, SC450, AFC, REA, BF, and RF were equal to 0.31, 0.38, 0.24, 0.32, 0.16, and 0.19, respectively. Maternal heritability for SC365 and SC450 was equal to 0.06 and 0.08, respectively. The highest genetic correlations were found among the scrotal circumferences. Testing for the inclusion of maternal effects in genetic parameters estimation for scrotal circumference should be evaluated in the Nelore breeding program, mostly for correctly ranking the animal's estimated breeding values. Similar heritability estimates were observed for scrotal circumference, as well as favorable genetic correlations of this trait with AFC and carcass traits. Thus, scrotal circumference measured at 365 days of age could be a target trait for consideration in the Nelore selection index in order to improve most of the traits herein analyzed.

Genetic associations between temperament and performance traits in Nellore beef cattle

The aim of this study was to estimate genetic associations between temperament and performance traits. Temperament was evaluated in yearling male and female Nellore cattle, using four traits: temperament score (TS), for assessing animals' reactions in a corral pen (n = 25,691); movement score (MOV), for animals' movements recorded inside the crush; crush score (CS), for animal's general reactivity inside the crush; and flight speed (FS), for the speed (in m/s) at which the animals exited the crush (n = 11,697, for the last three methods); for all the temperament traits, lower scores indicate animals with calmer temperament. Performance traits were visual scores for conformation (C), finishing precocity (P) and muscling (M) evaluated at yearlings, and average daily gain (ADG) was estimated from weaning to yearling. Bayesian inference using Gibbs sampling was applied to estimate (co)variance components and genetic and phenotypic parameters. Heritability estimates for the temperament traits ranged from 0.07 (CS) to 0.28 (FS). Genetic correlations of the temperament traits with ADG and C, P and M were negative and ranged from -0.02 to -0.31. Phenotypic correlations were negative and consistently lower than the genetic, ranging from -0.08 to -0.02. It was concluded that the temperament traits assessed had favourable genetic correlation estimates with the performance traits studied. However, indirect responses in temperament when selecting for higher ADG and visual scoring system of C, P and M, will be low.

Application of multivariate heavy-tailed distributions to residuals in the estimation of genetic parameters of growth traits in beef cattle

Assumptions of normality in most animal breeding applications may make inferences vulnerable to the presence of outliers. Heavy-tail densities are viable alternatives to normal distributions and provide robustness against unusual or outlying observations when used to model the densities of residual effects. Our objective is to compare estimates of genetic parameters by fitting multivariate normal (MN) or heavy-tail distributions [multivariate Student's t (MSt) and multivariate slash (MS)] for residuals in data of body birth weight (BBW), weaning (WW), and yearling (YW) weight traits in beef cattle. A total of 17,019 weight records for BBW, WW, and YW from 1998 through 2010 from a large commercial cow/calf operation in the sand hills of Nebraska were analyzed. Models included fixed effects of contemporary group and sire breed whereas animal and maternal effects were random and the degrees of freedom (v) was treated as unknown for MSt and MS. Model comparisons using deviance information criteria (DIC) favored MSt over MS and MN models, respectively. The posterior means [and 95% posterior probability intervals (PPI)] of v for the MSt and MS models were 5.28 (4.80, 5.85) and 1.88 (1.76, 2.00), respectively. Smaller values of posterior densities of v for MSt and MS models confirm that the assumption of normally distributed residuals is not adequate for the analysis of BBW, WW, and YW datasets. Posterior mean (PM) and posterior median (PD) estimates of direct and maternal genetic variances were the same and posterior densities of these parameters were found to be symmetric. The 95% PPI estimates from MN and MSt models for BBW did not overlap, which indicates significant difference between PM estimates from MN or MSt models. The observed antagonistic relationship between additive direct and additive maternal effects indicated that genetic evaluation and selection strategies will be sensitive to the assumed model for residuals.

Genetic correlations between heifer subsequent rebreeding and age at first calving and growth traits in Nellore cattle by Bayesian inference

We estimated heritability for subsequent rebreeding (SR) of heifers and genetic correlations between this trait and weaning weight (WW), weight gain from weaning to yearling (WG), age at first calving (AFC), and mature cow weight (MW), in order to evaluate whether SR could be included as selection criterion in Nellore cattle. The SR of heifers was defined by attributing a value of 1 (success) or 0 (failure) to heifers that calved or not, respectively, given that they had calved once before. Records from 127,430 Nellore animals were analyzed. Genetic parameters were estimated by Bayesian inference using a nonlinear (threshold) animal model for SR and a linear animal model for the other traits in three-trait analyses, including SR and WW in all analyses. The posterior means of heritability for SR, WW, WG, AFC, and MW were 0.18 ± 0.02, 0.21 ± 0.01, 0.30 ± 0.01, 0.21 ± 0.01, and 0.45 ± 0.04, respectively. The posterior mean estimates of genetic correlations between SR and WW, WG, AFC, and MW were -0.20 ± 0.06, 0.31 ± 0.07, -0.77 ± 0.05, and -0.15 ± 0.09, respectively. Based on these genetic correlations, selection for higher gains for WG and younger AFC should result in an increase in heifer SR rates, while long-term selection for increasing WW should promote unfavorable responses in heifer SR. The use of breeding values for heifer SR as a selection criterion of Nellore bulls could increase heifer SR rate without significant changes in MW.

Evaluation of mature cow weight: genetic correlations with traits used in selection indices, correlated responses, and genetic trends in Nelore cattle

Genetic correlations of selection indices and the traits considered in these indices with mature weight (MW) of Nelore females and correlated responses were estimated to determine whether current selection practices will result in an undesired correlated response in MW. Genetic trends for weaning and yearling indices and MW were also estimated. Data from 612,244 Nelore animals born between 1984 and 2010, belonging to different beef cattle evaluation programs from Brazil and Paraguay, were used. The following traits were studied: weaning conformation (WC), weaning precocity (WP), weaning muscling (WM), yearling conformation (YC), yearling precocity (YP), yearling muscling (YM), weaning and yearling indices, BW gain from birth to weaning (BWG), postweaning BW gain (PWG), scrotal circumference (SC), and MW. The variance and covariance components were estimated by Bayesian inference in a multitrait analysis, including all traits in the same analysis, using a nonlinear (threshold) animal model for visual scores and a linear animal model for the other traits. The mean direct heritabilities were 0.21±0.007 (WC), 0.22±0.007 (WP), 0.20±0.007 (WM), 0.43±0.005 (YC), 0.40±0.005 (YP), 0.40±0.005 (YM), 0.17±0.003 (BWG), 0.21±0.004 (PWG), 0.32±0.001 (SC), and 0.44±0.018 (MW). The genetic correlations between MW and weaning and yearling indices were positive and of medium magnitude (0.30±0.01 and 0.31±0.01, respectively). The genetic changes in weaning index, yearling index, and MW, expressed as units of genetic SD per year, were 0.26, 0.27, and 0.01, respectively. The genetic trend for MW was nonsignificant, suggesting no negative correlated response. The selection practice based on the use of sires with high final index giving preference for those better ranked for yearling precocity and muscling than for conformation generates only a minimal correlated response in MW.

Associations of FASN gene polymorphisms with economical traits in Nellore cattle (Bos primigenius indicus)

The aim of this study was to identify molecular markers to be applied to marker-assisted selection. Three SNPs of the FASN gene were studied. PCR-RFLP was used for genotyping. The SNPs g.17924A>G, g.17860C>T and g.15603A>G all in the FASN gene were genotyped using the enzymes MscI, DdeI and Hae III, respectively. The animals were raised in extensive systems and belong to three lines selected for growth as part of the Selection Program of Zebu and Caracu Breeds, São Paulo, Brazil. Allele and genotype frequencies were compared between selection lines using the Genepop 3.4. Associations between polymorphisms and the traits studied were evaluated using the PROC MIXED procedure of the SAS/STAT 9.1.3. The G and C alleles were the most frequent alleles of the g.15603A>G and g.17860C>T loci, respectively. The g.17924A>G locus showed no polymorphism in the population studied. Allele and genotype frequencies differed significantly between the NeT line and the NeC and NeS lines. The g.15603A>G polymorphism tended to exert an additive effect on rump fat thickness and male yearling height. For g.17860C>T, an additive effect on male yearling height was observed. Genotype combination analysis revealed a significant effect on loin eye area. Although this study provided evidence of an association between the FASN gene and some traits, more detailed analyses are needed to obtain more efficient molecular markers.