Comparison of Morphology and Calls of Two Cryptic Species of Physalaemus (Anura: Leiuperidae)

Evolution of macroglands and defensive mechanisms in Leiuperinae (Anura: Leptodactylidae)

Anurans show a wide variety of anti-predator mechanisms, and the species of the Neotropical clade Leiuperinae display several of them. Most species of Edalorhina, Physalaemus and Pleurodema show eyespots, hidden bright colours, macroglands in a inguinal/lumbar position, defensive behaviours and/or chemical defence. We conducted a histological analysis of dorsal and lumbar skin and revised the colour patterns, defensive behaviours and glandular secretions to study the diversity and evolution of anti-predator mechanisms associated with macroglands. We describe 17 characters and optimize these in a phylogenetic hypothesis of Leiuperinae. In the most recent common ancestor of Edalorhina + Engystomops + Physalaemus + Pleurodema, a particular type of serous gland (the main component of macroglands) evolved in the lumbar skin, along with the absence of the Eberth–Katschenko layer. A defensive behaviour observed in leiuperines with macroglands includes four displays (‘crouching down’ behaviour, rear elevation, body inflation and eye protection), all present in the same ancestor. The two elements associated with aposematism (hidden bright colours and eyespots) evolved independently in several species. Our results provide phylogenetic evidence for the startle-first hypothesis, which suggests that behavioural displays arise as sudden movements in camouflaged individuals to avoid predatory attacks, before the origin of bright coloration.

Determining levels of cryptic diversity within the endemic frog genera, Indirana and Walkerana, of the Western Ghats, India

A large number of species in the tropics are awaiting discovery, many due to their cryptic morphology ie. lack of discernable morphological difference. We explored the presence of cryptic lineages within the frog genera, Indirana and Walkerana, which are endemic to the Western Ghats of Peninsular India. By reconstructing a phylogeny using 5 genes and robust geographic sampling, we delimited 19 lineages along a population—species continuum, using multiple criteria including haplotype clusters, genetic distance, morphological distinctness, and geographical separation. Of these 19 lineages, 14 belonged to the genus Indirana and 5 to the genus Walkerana. Divergence dating analyses revealed that the clade comprising Indirana and Walkerana began diversifying around 71 mya and the most recent common ancestor of Indirana and Walkerana split around 43 mya. We tested for the presence of cryptic lineages by examining the relationship between genetic and morphological divergence among related pairs within a pool of 15 lineages. The pairs showed strong morphological conservatism across varying levels of genetic divergence. Our results highlight the prevalence of morphologically cryptic lineages in these ancient endemic clades of the Western Ghats. This emphasizes the significance of other axes, such as geography, in species delimitation. With increasing threats to amphibian habitats, it is imperative that cryptic lineages are identified so that appropriate conservation measures can be implemented.

Unpacking the species conundrum: philosophy, practice and a way forward

The history of ecology and evolutionary biology is rife with attempts to define and delimit species. However, there has been confusion between concepts and criteria, which has led to discussion, debate, and conflict, eventually leading to lack of consistency in delimitation. Here, we provide a broad review of species concepts, a clarification of category versus concept, an account of the general lineage concept (GLC), and finally a way forward for species discovery and delimitation. Historically, species were considered as varieties bound together by reproduction. After over 200 years of uncertainty, Mayr attempted to bring coherence to the definition of species through the biological species concept (BSC). This has, however, received much criticism, and the last half century has spawned at least 20 other concepts. A central philosophical problem is that concepts treat species as 'individuals' while the criteria for categorization treats them as 'classes'. While not getting away from this problem entirely, the GLC attempts to provide a framework where lineage divergence is influenced by a number of different factors (and correlated to different traits) which relate to the different species concepts. We also introduce an 'inclusive' probabilistic approach for understanding and delimiting species. Finally, we provide aWallacean (geography related) approach to the Linnaean problem of identifying and delimiting species, particularly for cases of allopatric divergence, and map this to the GLC. Going one step further, we take a morphometric terrain approach to visualizing and understanding differences between lineages. In summary, we argue that while generalized frameworks may work well for concepts of what species are, plurality and 'inclusive' probabilistic approaches may work best for delimitation.

Mating patterns and post-mating isolation in three cryptic species of the Engystomops petersi species complex

Determining the extent of reproductive isolation in cryptic species with dynamic geographic ranges can yield important insights into the processes that generate and maintain genetic divergence in the absence of severe geographic barriers. We studied mating patterns, propensity to hybridize in nature and subsequent fertilization rates, as well as survival and development of hybrid F₁ offspring for three nominal species of the Engystomops petersi species complex in Yasuní National Park, Ecuador. We found at least two species in four out of six locations sampled, and 14.3% of the wild pairs genotyped were mixed-species (heterospecific) crosses. We also found reduced fertilization rates in hybrid crosses between E. petersi females and E. “magnus” males, and between E. “magnus” females and E. “selva” males but not in the reciprocal crosses, suggesting asymmetric reproductive isolation for these species. Larval development times decreased in F₁ hybrid crosses compared to same species (conspecific) crosses, but we did not find significant reduction in larval survival or early metamorph survival. Our results show evidence of post-mating isolation for at least two hybrid crosses of the cryptic species we studied. The general decrease in fertilization rates in heterospecific crosses suggests that sexual selection and reinforcement might have not only contributed to the pattern of call variation and behavioral isolation we see between species today, but they may also contribute to further signal divergence and behavioral evolution, especially in locations where hybridization is common and fertilization success is diminished.

Bergmann's Body Size Rule Operates in Facultatively Endothermic Insects: Evidence from a Complex of Cryptic Bumblebee Species

According to Bergmann's rule we expect species with larger body size to inhabit locations with a cooler climate, where they may be well adapted to conserve heat and resist starvation. This rule is generally applied to endotherms. In contrast, body size in ectothermic invertebrates has been suggested to follow the reverse ecogeographic trend: these converse Bergmann's patterns may be driven by the ecological constraints of shorter season length and lower food availability in cooler high latitude locations. Such patterns are particularly common in large insects due to their longer development times. As large and facultatively endothermic insects, bumblebees could thus be expected to follow either trend. In this investigation, we studied body size of three bumblebee species over a large spatial area and investigated whether interspecific trends in body size correspond to differences in their distribution consistent with either Bergmann's or a converse Bergmann's rule. We examined the body size of queens, males and workers of the Bombus lucorum complex of cryptic bumblebee species from across the whole of Great Britain. We found interspecific differences in body size corresponding to Bergmann's rule: queens and males of the more northerly distributed, cool-adapted, species were largest. In contrast, the mean body size of the worker caste did not vary between the three species. These differences in body size may have evolved under selection pressures for thermoregulation or starvation resistance. We suggest that this case study in facultatively endothermic insects may help clarify the selection pressures governing Bergmann rule trends more generally.

High levels of diversity uncovered in a widespread nominal taxon: continental phylogeography of the neotropical tree frog Dendropsophus minutus

Species distributed across vast continental areas and across major biomes provide unique model systems for studies of biotic diversification, yet also constitute daunting financial, logistic and political challenges for data collection across such regions. The tree frog Dendropsophus minutus (Anura: Hylidae) is a nominal species, continentally distributed in South America, that may represent a complex of multiple species, each with a more limited distribution. To understand the spatial pattern of molecular diversity throughout the range of this species complex, we obtained DNA sequence data from two mitochondrial genes, cytochrome oxidase I (COI) and the 16S rhibosomal gene (16S) for 407 samples of D. minutus and closely related species distributed across eleven countries, effectively comprising the entire range of the group. We performed phylogenetic and spatially explicit phylogeographic analyses to assess the genetic structure of lineages and infer ancestral areas. We found 43 statistically supported, deep mitochondrial lineages, several of which may represent currently unrecognized distinct species. One major clade, containing 25 divergent lineages, includes samples from the type locality of D. minutus. We defined that clade as the D. minutus complex. The remaining lineages together with the D. minutus complex constitute the D. minutus species group. Historical analyses support an Amazonian origin for the D. minutus species group with a subsequent dispersal to eastern Brazil where the D. minutus complex originated. According to our dataset, a total of eight mtDNA lineages have ranges >100,000 km². One of them occupies an area of almost one million km² encompassing multiple biomes. Our results, at a spatial scale and resolution unprecedented for a Neotropical vertebrate, confirm that widespread amphibian species occur in lowland South America, yet at the same time a large proportion of cryptic diversity still remains to be discovered.

High levels of cryptic species diversity uncovered in Amazonian frogs

One of the greatest challenges for biodiversity conservation is the poor understanding of species diversity. Molecular methods have dramatically improved our ability to uncover cryptic species, but the magnitude of cryptic diversity remains unknown, particularly in diverse tropical regions such as the Amazon Basin. Uncovering cryptic diversity in amphibians is particularly pressing because amphibians are going extinct globally at an alarming rate. Here, we use an integrative analysis of two independent Amazonian frog clades, Engystomops toadlets and Hypsiboas treefrogs, to test whether species richness is underestimated and, if so, by how much. We sampled intensively in six countries with a focus in Ecuador (Engystomops: 252 individuals from 36 localities; Hypsiboas: 208 individuals from 65 localities) and combined mitochondrial DNA, nuclear DNA, morphological, and bioacoustic data to detect cryptic species. We found that in both clades, species richness was severely underestimated, with more undescribed species than described species. In Engystomops, the two currently recognized species are actually five to seven species (a 150-250% increase in species richness); in Hypsiboas, two recognized species represent six to nine species (a 200-350% increase). Our results suggest that Amazonian frog biodiversity is much more severely underestimated than previously thought.

Herpetofauna da área do Igarapé Esperança na Reserva Extrativista Riozinho da Liberdade, Acre - Brasil

A região do Alto Juruá localiza-se no estado do Acre (oeste da Amazônia brasileira) e é uma região conhecida por apresentar uma alta diversidade e também considerada prioritária para inventariamento e conservação da herpetofauna. Este trabalho foi realizado entre agosto de 2006 a junho de 2008 e apresenta a lista de espécies de anfíbios e répteis da área do Igarapé Esperança na Reserva Extrativista Riozinho da Liberdade, Acre. Quatro métodos amostrais foram empregados para inventariar a herpetofauna: procura limitada por tempo, armadilhas de interceptação e queda, registros auditivos e encontros ocasionais. Foram registradas 162 espécies, sendo 83 de anfíbios (80 anuros, dois gimnofionos e uma salamandra) e 79 de répteis (29 lagartos, 42 serpentes, um anfisbênio, quatro quelônios e três jacarés). Dessas espécies, onze (Adelphobates quinquevittatus, Hyalinobatrachium munozorum, Pristimantis academicus, P. aureolineatus, Syncope antenori, Alopoglossus buckleyi, Drymobius rhombifer, Liophis dorsocorallinus, L. taeniogaster, Umbrivaga pygmaea e Micrurus remotus) foram registradas pela primeira vez para o Acre, sendo que seis delas (H. munozorum, P. academicus, P. aureolineatus, S. antenori, A. buckleyi e L. dorsocorallinus) consistem também os primeiros registros para o Brasil. Salienta-se aqui a importância da forma do uso das florestas pelas populações tradicionais (indígenas, extrativistas e ribeirinhos) e das áreas protegidas na conservação da alta biodiversidade encontrada no Alto Juruá e também a necessidade de estudos sobre o uso de algumas espécies (especialmente de quelônios e crocodilianos) para analisar possíveis impactos sobre as populações desses animais.