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Patrón-Rivero C, Osorio-Olvera L, Rojas-Soto O, Chiappa-Carrara X, Villalobos F, Bessesen B, López-Reyes K, Yañez-Arenas C. Global analysis of the influence of environmental variables to explain ecological niches and realized thermal niche boundaries of sea snakes. PLoS One 2024; 19:e0310456. [PMID: 39636927 PMCID: PMC11620380 DOI: 10.1371/journal.pone.0310456] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/03/2024] [Accepted: 09/02/2024] [Indexed: 12/07/2024] Open
Abstract
Understanding the factors affecting species distributions is a central topic in ecology and biogeography. However, most research on this topic has focused on species inhabiting terrestrial environments. At broad scales, abiotic variables consistently serve as primary determinants of species' distributions. In this study, we investigated the explanatory power of different abiotic variables in determining the distribution patterns of sea snakes on a global scale. Additionally, as the boundaries of realized thermal niches have significant implications for the ecology of species and their geographic distributions, we evaluated the asymmetry of realized thermal limits (i.e., differences in variances between the upper and lower limits of the realized thermal niche). We obtained 10 marine environmental variables from global databases along with >5000 occurrence records for 51 sea snake species in 4 genera across the group's entire known geographic range. Using these data, we employed correlative ecological niche modeling to analyze the influence of the individual variables in explaining species' distributions. To estimate the realized thermal limits of each species, we extracted the mean, minimum, and maximum temperature values at four depths (superficial, mean benthic, minimum benthic, and maximum benthic) for each occurrence record of the species. We then evaluated the asymmetry of the realized thermal niche by measuring and comparing the variances in the upper and lower limits. Both analyses (the importance of variables and realized thermal limit asymmetry) were performed at three taxonomic levels (sea snakes as a lineage of marine-adapted elapids [true sea snakes + sea kraits], subfamily, and genus) and two spatial resolutions. Overall, we found that temperature, silicate, nitrate, salinity, and phosphate concentrations were the most influential factors in explaining the spatial distribution patterns of sea snakes, regardless of taxonomic level or spatial resolution. Similarly, we observed that the realized thermal limits were asymmetric, with a higher variance in the lower limits, and that asymmetry decreased as the taxonomic level and spatial resolution increased.
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Affiliation(s)
- Carlos Patrón-Rivero
- Laboratorio de Ecología Geográfica, Unidad de Conservación de la Biodiversidad, UMDI-Sisal, Facultad de Ciencias, Universidad Nacional Autónoma de Mexico, Sierra Papacal, Yucatán, Mexico
| | - Luis Osorio-Olvera
- Laboratorio de Ecoinformática de la Biodiversidad, Departamento de Ecología de la Biodiversidad, Instituto de Ecología, Universidad Nacional Autónoma de México, Circuito Exterior s/n Anexo al Jardín Botánico, Ciudad Universitaria, Coyoacán, Ciudad de México, México
| | - Octavio Rojas-Soto
- Laboratorio de Bioclimatología, Red de Biología Evolutiva, Instituto de Ecología A.C., Xalapa, Veracruz, México
| | - Xavier Chiappa-Carrara
- Departamento de Sistemas y Procesos Naturales, Escuela Nacional de Estudios Superiores Unidad Mérida, Universidad Nacional Autónoma de Mexico, Ucú, Yucatán, Mexico
| | - Fabricio Villalobos
- Laboratorio de Macroecología Evolutiva Red de Biología Evolutiva, Instituto de Ecología, A.C, Xalapa, Veracruz, México
| | - Brooke Bessesen
- Department of Ecology and Evolutionary Biology, University of Reading, Reading, United Kingdom
| | - Kevin López-Reyes
- Laboratorio de Ecología Geográfica, Unidad de Conservación de la Biodiversidad, UMDI-Sisal, Facultad de Ciencias, Universidad Nacional Autónoma de Mexico, Sierra Papacal, Yucatán, Mexico
| | - Carlos Yañez-Arenas
- Laboratorio de Ecología Geográfica, Unidad de Conservación de la Biodiversidad, UMDI-Sisal, Facultad de Ciencias, Universidad Nacional Autónoma de Mexico, Sierra Papacal, Yucatán, Mexico
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Seiko T, Kishida T, Toyama M, Hariyama T, Okitsu T, Wada A, Toda M, Satta Y, Terai Y. Visual adaptation of opsin genes to the aquatic environment in sea snakes. BMC Evol Biol 2020; 20:158. [PMID: 33243140 PMCID: PMC7690139 DOI: 10.1186/s12862-020-01725-1] [Citation(s) in RCA: 5] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/04/2020] [Accepted: 11/22/2020] [Indexed: 11/10/2022] Open
Abstract
BACKGROUND Evolutionary transitions from terrestrial to aquatic life history cause drastic changes in sensory systems. Indeed, the drastic changes in vision have been reported in many aquatic amniotes, convergently. Recently, the opsin genes of the full-aquatic sea snakes have been reported. However, those of the amphibious sea snakes have not been examined in detail. RESULTS Here, we investigated opsin genes and visual pigments of sea snakes. We determined the sequences of SWS1, LWS, and RH1 genes from one terrestrial, three amphibious and four fully-aquatic elapids. Amino acid replacements at four and one spectra-tuning positions were found in LWS and RH1, respectively. We measured or predicted absorption of LWS and RH1 pigments with A1-derived retinal. During their evolution, blue shifts of LWS pigments have occurred stepwise in amphibious sea snakes and convergently in both amphibious and fully-aquatic species. CONCLUSIONS Blue shifted LWS pigments may have adapted to deep water or open water environments dominated by blue light. The evolution of opsins differs between marine mammals (cetaceans and pinnipeds) and sea snakes in two fundamental ways: (1) pseudogenization of opsins in marine mammals; and (2) large blue shifts of LWS pigments in sea snakes. It may be possible to explain these two differences at the level of photoreceptor cell composition given that cone and rod cells both exist in mammals whereas only cone cells exist in fully-aquatic sea snakes. We hypothesize that the differences in photoreceptor cell compositions may have differentially affected the evolution of opsins in divergent amniote lineages.
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Affiliation(s)
- Takashi Seiko
- Department of Evolutionary Studies of Biosystems, SOKENDAI (The Graduate University for Advanced Studies), Shonan Village, Hayama, Kanagawa 240-0193 Japan
| | - Takushi Kishida
- Wildlife Research Center, Kyoto University, 2-24 Tanaka Sekiden-cho, Sakyo, Kyoto 606-8203 Japan
| | - Mina Toyama
- Department of Biology, Faculty of Medicine, Hamamatsu University School of Medicine, Handayama, Hamamatsu Japan
| | - Takahiko Hariyama
- Department of Biology, Faculty of Medicine, Hamamatsu University School of Medicine, Handayama, Hamamatsu Japan
| | - Takashi Okitsu
- Laboratory of Organic Chemistry for Life Science, Kobe Pharmaceutical University, 4-19-1, Motoyamakita, Higashinada, Kobe, 658-8558 Japan
| | - Akimori Wada
- Laboratory of Organic Chemistry for Life Science, Kobe Pharmaceutical University, 4-19-1, Motoyamakita, Higashinada, Kobe, 658-8558 Japan
| | - Mamoru Toda
- Tropical Biosphere Research Center, University of the Ryukyus, Nishihara, Okinawa 903-0213 Japan
| | - Yoko Satta
- Department of Evolutionary Studies of Biosystems, SOKENDAI (The Graduate University for Advanced Studies), Shonan Village, Hayama, Kanagawa 240-0193 Japan
| | - Yohey Terai
- Department of Evolutionary Studies of Biosystems, SOKENDAI (The Graduate University for Advanced Studies), Shonan Village, Hayama, Kanagawa 240-0193 Japan
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Udyawer V, Simpfendorfer CA, Heupel MR, Clark TD. Coming up for air: thermal-dependence of dive behaviours and metabolism in sea snakes. J Exp Biol 2016; 219:3447-3454. [DOI: 10.1242/jeb.146571] [Citation(s) in RCA: 6] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/22/2016] [Accepted: 08/22/2016] [Indexed: 02/04/2023]
Abstract
Cutaneous gas exchange allows some air-breathing diving ectotherms to supplement their pulmonary oxygen uptake, which may allow prolongation of dives and an increased capacity to withstand anthropogenic and natural threatening processes that increase submergence times. However, little is known of the interplay between metabolism, bimodal oxygen uptake and activity levels across thermal environments in diving ectotherms. Here, we show in two species of sea snake (spine-bellied sea snake; Hydrophis curtus and elegant sea snake; H. elegans) that increasing temperature elevates surfacing rates, increases total oxygen consumption, and decreases dive durations. The majority of dives observed in both species remained within estimated maximal aerobic limits. While cutaneous gas exchange accounted for a substantial proportion of total oxygen consumption (up to 23%), unexpectedly it was independent of water temperature and activity levels, suggesting a diffusion-limited mechanism. Our findings demonstrate that rising water temperature and a limited capability to up-regulate cutaneous oxygen uptake may compromise the proficiency with which sea snakes perform prolonged dives. This may hinder their capacity to withstand ongoing anthropogenic activities like trawl fishing, and increase their susceptibility to surface predation as their natural environments continue to warm.
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Affiliation(s)
- Vinay Udyawer
- Centre for Sustainable Tropical Fisheries and Aquaculture & College of Marine and Environmental Sciences, James Cook University, Townsville, Queensland, Australia
| | - Colin A. Simpfendorfer
- Centre for Sustainable Tropical Fisheries and Aquaculture & College of Marine and Environmental Sciences, James Cook University, Townsville, Queensland, Australia
| | - Michelle R. Heupel
- Centre for Sustainable Tropical Fisheries and Aquaculture & College of Marine and Environmental Sciences, James Cook University, Townsville, Queensland, Australia
- Australian Institute of Marine Science, Townsville, Queensland, Australia
| | - Timothy D. Clark
- Australian Institute of Marine Science, Townsville, Queensland, Australia
- Current address: University of Tasmania & CSIRO Agriculture and Food, Hobart, Tasmania, Australia
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