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Dhieb D, Bastaki K. Pharmaco-Multiomics: A New Frontier in Precision Psychiatry. Int J Mol Sci 2025; 26:1082. [PMID: 39940850 PMCID: PMC11816785 DOI: 10.3390/ijms26031082] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/20/2024] [Revised: 01/19/2025] [Accepted: 01/21/2025] [Indexed: 02/16/2025] Open
Abstract
The landscape of psychiatric care is poised for transformation through the integration of pharmaco-multiomics, encompassing genomics, proteomics, metabolomics, transcriptomics, epigenomics, and microbiomics. This review discusses how these approaches can revolutionize personalized treatment strategies in psychiatry by providing a nuanced understanding of the molecular bases of psychiatric disorders and individual pharmacotherapy responses. With nearly one billion affected individuals globally, the shortcomings of traditional treatments, characterized by inconsistent efficacy and frequent adverse effects, are increasingly evident. Advanced computational technologies such as artificial intelligence (AI) and machine learning (ML) play crucial roles in processing and integrating complex omics data, enhancing predictive accuracy, and creating tailored therapeutic strategies. To effectively harness the potential of pharmaco-multiomics approaches in psychiatry, it is crucial to address challenges such as high costs, technological demands, and disparate healthcare systems. Additionally, navigating stringent ethical considerations, including data security, potential discrimination, and ensuring equitable access, is essential for the full realization of this approach. This process requires ongoing validation and comprehensive integration efforts. By analyzing recent advances and elucidating how different omic dimensions contribute to therapeutic customization, this review aims to highlight the promising role of pharmaco-multiomics in enhancing patient outcomes and shifting psychiatric treatments from a one-size-fits-all approach towards a more precise and patient-centered model of care.
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Affiliation(s)
| | - Kholoud Bastaki
- Pharmaceutical Sciences Department, College of Pharmacy, QU Health, Qatar University, Doha P.O. Box 2713, Qatar;
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Tsermpini EE, Al-Mahayri ZN, Ali BR, Patrinos GP. Clinical implementation of drug metabolizing gene-based therapeutic interventions worldwide. Hum Genet 2022; 141:1137-1157. [PMID: 34599365 DOI: 10.1007/s00439-021-02369-x] [Citation(s) in RCA: 6] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/05/2021] [Accepted: 09/09/2021] [Indexed: 02/05/2023]
Abstract
Over the last few years, the field of pharmacogenomics has gained considerable momentum. The advances of new genomics and bioinformatics technologies propelled pharmacogenomics towards its implementation in the clinical setting. Since 2007, and especially the last-5 years, many studies have focused on the clinical implementation of pharmacogenomics while identifying obstacles and proposed strategies and approaches for overcoming them in the real world of primary care as well as outpatients and inpatients clinics. Here, we outline the recent pharmacogenomics clinical implementation projects and provide details of the study designs, including the most predominant and innovative, as well as clinical studies worldwide that focus on outpatients and inpatient clinics, and primary care. According to these studies, pharmacogenomics holds promise for improving patients' health in terms of efficacy and toxicity, as well as in their overall quality of life, while simultaneously can contribute to the minimization of healthcare expenditure.
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Affiliation(s)
- Evangelia Eirini Tsermpini
- School of Health Sciences, Department of Pharmacy, Laboratory of Pharmacogenomics and Individualized Therapy, University of Patras, University Campus, 265 04, RionPatras, Greece
| | - Zeina N Al-Mahayri
- Department of Genetics and Genomics, College of Medicine and Health Sciences, United Arab Emirates University, Al-Ain, United Arab Emirates
| | - Bassam R Ali
- Department of Genetics and Genomics, College of Medicine and Health Sciences, United Arab Emirates University, Al-Ain, United Arab Emirates
- Zayed Center for Health Sciences, United Arab Emirates University, Al-Ain, United Arab Emirates
| | - George P Patrinos
- School of Health Sciences, Department of Pharmacy, Laboratory of Pharmacogenomics and Individualized Therapy, University of Patras, University Campus, 265 04, RionPatras, Greece.
- Department of Genetics and Genomics, College of Medicine and Health Sciences, United Arab Emirates University, Al-Ain, United Arab Emirates.
- Zayed Center for Health Sciences, United Arab Emirates University, Al-Ain, United Arab Emirates.
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Duong B. Realities of Pharmacogenomic and Minimizing Misconceptions and Medication Misadventures. Dela J Public Health 2021; 7:12-15. [PMID: 35619975 PMCID: PMC9124564 DOI: 10.32481/djph.2021.12.006] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/17/2022] Open
Abstract
Pharmacogenetics allows providers to enhance their treatment decisions for common medications used in certain conditions such as depression, gastroesophageal reflux disease (GERD), pain, and acute lymphoblastic leukemia. A precision medicine approach combines pharmacogenetics (when appropriate) with other clinical and environmental factors to minimize trial-and-error of treatment. Public awareness of the impact of pharmacogenetics on treatment decisions is growing, and healthcare should be aware of the resources supporting it. Pharmacogenetics may seem daunting, but the accessibility of pharmacogenetic testing has improved with growing availability of evidence-based clinical recommendations, pharmacogenetic tests, clinical decision support resources, insurance coverage, and digestible education materials. As precision medicine and precision public health expands over the next decade, pharmacogenetic testing will continuously grow to be cheaper and part of routine genetic or genomic screenings, and be another common test-like liver or kidney function tests-that can enhance treatment decisions.
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Affiliation(s)
- Benjamin Duong
- Nemours Children's Health Delaware, Precision Medicine, Clinical Pharmacogenomics Service
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Liu M, Van Driest SL, Vnencak-Jones CL, Saucier LAG, Roland BP, Gatto CL, Just SL, Weitkamp AO, Peterson JF. Impact of Updating Pharmacogenetic Results: Lessons Learned from the PREDICT Program. J Pers Med 2021; 11:jpm11111051. [PMID: 34834403 PMCID: PMC8617828 DOI: 10.3390/jpm11111051] [Citation(s) in RCA: 4] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/15/2021] [Revised: 10/09/2021] [Accepted: 10/13/2021] [Indexed: 12/26/2022] Open
Abstract
Pharmacogenomic (PGx) evidence for selective serotonin reuptake inhibitors (SSRIs) continues to evolve. For sites offering testing, maintaining up-to-date interpretations and implementing new clinical decision support (CDS) driven by existing results creates practical and technical challenges. Vanderbilt University Medical Center initiated panel testing in 2010, added CYP2D6 testing in 2017, and released CDS for SSRIs in 2020. We systematically reinterpreted historic CYP2C19 and CYP2D6 genotypes to update phenotypes to current nomenclature and to launch provider CDS and patient-oriented content for SSRIs. Chart review was conducted to identify and recontact providers caring for patients with current SSRI therapy and new actionable recommendations. A total of 15,619 patients’ PGx results were reprocessed. Of the non-deceased patients reprocessed, 21% (n = 3278) resulted in CYP2C19*1/*17 reinterpretations. Among 289 patients with an actionable recommendation and SSRI medication prescription, 31.8% (n = 92) did not necessitate contact of a clinician, while 43.2% (n = 125) resulted in clinician contacted, and for 25% (n = 72) no appropriate clinician was able to be identified. Maintenance of up-to-date interpretations and recommendations for PGx results over the lifetime of a patient requires continuous effort. Reprocessing is a key strategy for maintenance and expansion of PGx content to be periodically considered and implemented.
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Affiliation(s)
- Michelle Liu
- Department of Pharmacy, Vanderbilt University Medical Center, Nashville, TN 37232, USA
- Correspondence:
| | - Sara L. Van Driest
- Department of Medicine, Vanderbilt University Medical Center, Nashville, TN 37232, USA; (S.L.V.D.); (J.F.P.)
- Department of Pediatrics, Vanderbilt University Medical Center, Nashville, TN 37232, USA;
| | - Cindy L. Vnencak-Jones
- Department of Pediatrics, Vanderbilt University Medical Center, Nashville, TN 37232, USA;
- Department of Pathology, Microbiology, and Immunology, Vanderbilt University Medical Center, Nashville, TN 37232, USA
| | - Leigh Ann G. Saucier
- Vanderbilt Institute for Clinical & Translational Research, Vanderbilt University Medical Center, Nashville, TN 37232, USA; (L.A.G.S.); (B.P.R.); (C.L.G.)
| | - Bartholomew P. Roland
- Vanderbilt Institute for Clinical & Translational Research, Vanderbilt University Medical Center, Nashville, TN 37232, USA; (L.A.G.S.); (B.P.R.); (C.L.G.)
| | - Cheryl L. Gatto
- Vanderbilt Institute for Clinical & Translational Research, Vanderbilt University Medical Center, Nashville, TN 37232, USA; (L.A.G.S.); (B.P.R.); (C.L.G.)
- Department of Biostatistics, Vanderbilt University Medical Center, Nashville, TN 37232, USA
| | - Shari L. Just
- Health IT Decision Support and Knowledge Engineering, Vanderbilt University Medical Center, Nashville, TN 37232, USA;
| | - Asli O. Weitkamp
- Department of Biomedical Informatics, Vanderbilt University Medical Center, Nashville, TN 37232, USA;
| | - Josh F. Peterson
- Department of Medicine, Vanderbilt University Medical Center, Nashville, TN 37232, USA; (S.L.V.D.); (J.F.P.)
- Department of Biomedical Informatics, Vanderbilt University Medical Center, Nashville, TN 37232, USA;
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Potential Use of Pharmacogenetics to Reduce Drug-Induced Syndrome of Inappropriate Antidiuretic Hormone (SIADH). J Pers Med 2021; 11:jpm11090853. [PMID: 34575630 PMCID: PMC8466173 DOI: 10.3390/jpm11090853] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/29/2021] [Revised: 08/25/2021] [Accepted: 08/26/2021] [Indexed: 11/21/2022] Open
Abstract
Syndrome of inappropriate antidiuretic hormone (SIADH) is a common cause of hyponatremia, and many cases represent adverse reactions to drugs that alter ion channel conductance within the peptidergic nerve terminals of the posterior pituitary. The frequency of drug-induced SIADH increases with age; as many as 20% of patients residing in nursing homes have serum sodium levels below 135 mEq/L. Mild hyponatremia is associated with cognitive changes, gait instability, and falls. Severe hyponatremia is associated with cerebral edema, seizures, permanent disability, and/or death. Although pharmacogenetic tests are now being deployed for some drugs capable of causing SIADH (e.g., antidepressants, antipsychotics, and opioid analgesics), the implementation of these tests has been based upon the prior known association of these drugs with other serious adverse drug reactions (e.g., electrocardiographic abnormalities). Work is needed in large observational cohorts to quantify the strength of association between pharmacogene variants and drug-induced SIADH so that decision support can be developed to identify patients at high risk.
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Hongkaew Y, Wang WY, Gaedigk R, Sukasem C, Gaedigk A. Resolving discordant CYP2D6 genotyping results in Thai subjects: platform limitations and novel haplotypes. Pharmacogenomics 2021; 22:529-541. [PMID: 33998274 DOI: 10.2217/pgs-2021-0013] [Citation(s) in RCA: 9] [Impact Index Per Article: 2.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/20/2022] Open
Abstract
Aim: Several CYP2D6 Luminex xTAG genotype calls were identified as inconsistent or suspicious among Thai subjects and further characterized to identify the root causes. Material & methods: Forty-eight subjects were followed-up with long-range-PCR, quantitative copy number assays and/or Sanger sequencing. Results: Most of the Luminex-duplication calls were either negative or had hybrid structures involving CYP2D6*36 in various configurations. Ten samples were inaccurately called as CYP2D6*2, *29 or *35 alleles. Sequencing revealed three novel haplotypes, CYP2D6*142, *143 and *144 of which two are nonfunctional. Conclusion: The Luminex platform produced a relatively high number of false genotype calls for Thai subjects. Our findings underscore the need for the systematic characterization of the CYP2D6 locus in diverse populations and rigorous platform validation.
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Affiliation(s)
- Yaowaluck Hongkaew
- Department of Laboratory, Division of Advance Research & Development Laboratory, Bumrungrad International Hospital, Bangkok, Thailand
| | - Wendy Y Wang
- Division of Clinical Pharmacology, Toxicology & Therapeutic Innovation, Children's Mercy Kansas City, Kansas City, MO 64108, USA
| | - Roger Gaedigk
- Division of Clinical Pharmacology, Toxicology & Therapeutic Innovation, Children's Mercy Kansas City, Kansas City, MO 64108, USA
| | - Chonlaphat Sukasem
- Department of Pathology, Division of Pharmacogenomics & Personalized Medicine, Faculty of Medicine Ramathibodi Hospital, Mahidol University, Bangkok, 10400, Thailand
| | - Andrea Gaedigk
- Division of Clinical Pharmacology, Toxicology & Therapeutic Innovation, Children's Mercy Kansas City, Kansas City, MO 64108, USA.,School of Medicine, University of Missouri-Kansas City, Kansas City, MO 64108, USA
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Rahma AT, Elsheik M, Elbarazi I, Ali BR, Patrinos GP, Kazim MA, Alfalasi SS, Ahmed LA, Al Maskari F. Knowledge and Attitudes of Medical and Health Science Students in the United Arab Emirates toward Genomic Medicine and Pharmacogenomics: A Cross-Sectional Study. J Pers Med 2020; 10:191. [PMID: 33114420 PMCID: PMC7711592 DOI: 10.3390/jpm10040191] [Citation(s) in RCA: 17] [Impact Index Per Article: 3.4] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/22/2020] [Revised: 10/17/2020] [Accepted: 10/22/2020] [Indexed: 02/05/2023] Open
Abstract
Medical and health science students represent future health professionals, and their perceptions are essential to increasing awareness on genomic medicine and pharmacogenomics. Lack of education is one of the significant barriers that may affect health professional's ability to interpret and communicate pharmacogenomics information and results to their clients. Our aim was to assess medical and health science students' knowledge, attitudes and perception for a better genomic medicine and pharmacogenomics practice in the United Arab Emirates (UAE). A cross-sectional study was conducted using a validated questionnaire distributed electronically to students recruited using random and snowball sampling methods. A total of 510 students consented and completed the questionnaire between December 2018 and October 2019. The mean knowledge score (SD) for students was 5.4 (±2.7). There were significant differences in the levels of knowledge by the year of study of bachelor's degree students, the completion status of training or education in pharmacogenomics (PGX) or pharmacogenetics and the completion of an internship or study abroad program (p-values < 0.05. The top two barriers that students identified in the implementation of genomic medicine and pharmacogenomics were lack of training or education (59.7%) and lack of clinical guidelines (58.7%). Concerns regarding confidentiality and discrimination were stated. The majority of medical and health science students had positive attitudes but only had a fair level of knowledge. Stakeholders in the UAE must strive to acquaint their students with up-to-date knowledge of genomic medicine and pharmacogenomics.
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Affiliation(s)
- Azhar T. Rahma
- Institute of Public Health, College of Medicine & Health Sciences, United Arab Emirates University, Al Ain 17666, UAE; (A.T.R.); (M.E.); (I.E.); (M.A.K.); (S.S.A.); (L.A.A.)
| | - Mahanna Elsheik
- Institute of Public Health, College of Medicine & Health Sciences, United Arab Emirates University, Al Ain 17666, UAE; (A.T.R.); (M.E.); (I.E.); (M.A.K.); (S.S.A.); (L.A.A.)
- Zayed Center for Health Sciences, United Arab Emirates University, Al Ain 17666, UAE; (B.R.A.); (G.P.P.)
| | - Iffat Elbarazi
- Institute of Public Health, College of Medicine & Health Sciences, United Arab Emirates University, Al Ain 17666, UAE; (A.T.R.); (M.E.); (I.E.); (M.A.K.); (S.S.A.); (L.A.A.)
| | - Bassam R. Ali
- Zayed Center for Health Sciences, United Arab Emirates University, Al Ain 17666, UAE; (B.R.A.); (G.P.P.)
- Department of Pathology and Genomics and Genetics, College of Medicine and Health Sciences, United Arab Emirates University, Al Ain 17666, UAE
| | - George P. Patrinos
- Zayed Center for Health Sciences, United Arab Emirates University, Al Ain 17666, UAE; (B.R.A.); (G.P.P.)
- Department of Pathology and Genomics and Genetics, College of Medicine and Health Sciences, United Arab Emirates University, Al Ain 17666, UAE
- Department of Pharmacy, School of Health Sciences, University of Patras, 26504 Patras, Greece
| | - Maitha A. Kazim
- Institute of Public Health, College of Medicine & Health Sciences, United Arab Emirates University, Al Ain 17666, UAE; (A.T.R.); (M.E.); (I.E.); (M.A.K.); (S.S.A.); (L.A.A.)
| | - Salma S. Alfalasi
- Institute of Public Health, College of Medicine & Health Sciences, United Arab Emirates University, Al Ain 17666, UAE; (A.T.R.); (M.E.); (I.E.); (M.A.K.); (S.S.A.); (L.A.A.)
| | - Luai A. Ahmed
- Institute of Public Health, College of Medicine & Health Sciences, United Arab Emirates University, Al Ain 17666, UAE; (A.T.R.); (M.E.); (I.E.); (M.A.K.); (S.S.A.); (L.A.A.)
- Zayed Center for Health Sciences, United Arab Emirates University, Al Ain 17666, UAE; (B.R.A.); (G.P.P.)
| | - Fatma Al Maskari
- Institute of Public Health, College of Medicine & Health Sciences, United Arab Emirates University, Al Ain 17666, UAE; (A.T.R.); (M.E.); (I.E.); (M.A.K.); (S.S.A.); (L.A.A.)
- Zayed Center for Health Sciences, United Arab Emirates University, Al Ain 17666, UAE; (B.R.A.); (G.P.P.)
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