Characterization of three Pb-resistant fungi and their potential Pb2+ ions adsorption capacities

Genome sequencing of Cladophialophora exuberans, a novel candidate for bioremediation of hydrocarbon and heavy metal polluted habitats

Cladophialophora exuberans is a filamentous fungus related to black yeasts in the order Chaetothyriales. These melanized fungi are known for their 'dual ecology', often occurring in toxic environments and also being frequently involved in human infection. Particularly Cladophialophora exuberans, C. immunda, C. psammophila, and Exophiala mesophila have been described with a pronounced ability to degrade aromatic compounds and xenobiotic volatiles, such as benzene, toluene, ethyl-benzene, and xylene, and are candidates for bioremediation applications. The objective of the present study is the sequencing, assembly, and description of the whole genome of C. exuberans focusing on genes and pathways related to carbon and toxin management, assessing the tolerance and bioremediation of lead and copper, and verifying the presence of genes for metal homeostasis. Genomic evaluations were carried out through a comparison with sibling species including clinical and environmental strains. Tolerance of metals was evaluated via a microdilution method establishing minimum inhibitory (MIC) and fungicidal concentrations (MFC), and agar diffusion assays. Heavy metal bioremediation was evaluated via graphite furnace atomic absorption spectroscopy (GFAAS). The final assembly of C. exuberans comprised 661 contigs, with genome size of 38.10 Mb, coverage of 89.9X and a GC content of 50.8%. In addition, inhibition of growth was shown at concentrations of 1250 ppm for copper and at 625 ppm for lead, using the MIC method. In the agar tests, the strain grew at 2500 ppm of copper and lead. In GFAAS tests, uptake capacities were observed of 89.2% and 95.7% for copper and lead, respectively, after 21 experimental days. This study enabled the annotation of genes involved in heavy metal homeostasis and also contributed to a better understanding of the mechanisms used in tolerance of and adaptation to extreme conditions.

Microbial remediation mechanisms and applications for lead-contaminated environments

High concentrations of lead (Pb) in agricultural soil and wastewater represent a severe threat to the ecosystem and health of living organisms. Among available removal techniques, microbial remediation has attracted much attention due to its lower cost, higher efficiency, and less impact on the environment; hence, it is an effective alternative to conventional physical or chemical Pb-remediation technologies. In the present review, recent advances on the Pb-remediation mechanisms of bacteria, fungi and microalgae have been reported, as well as their detoxification pathways. Based on the previous researches, microorganisms have various remediation mechanisms to cope with Pb pollution, which are basically categorized into biosorption, bioprecipitation, biomineralization, and bioaccumulations. This paper summarizes microbial Pb-remediation mechanisms, factors affecting Pb removal, and examples of each case are described in detail. We emphatically discuss the mechanisms of microbial immobilization of Pb, which can resist toxicity by synthesizing nanoparticles to convert dissolved Pb(II) into less toxic forms. The tolerance mechanisms of microbes to Pb are discussed at the molecular level as well. Finally, we conclude the research challenges and development prospects regarding the microbial remediation of Pb-polluted environment. The current review provides insight of interaction between lead and microbes and their potential applications for Pb removal.

A review on mechanism of biomineralization using microbial-induced precipitation for immobilizing lead ions

Lead (Pb) is a toxic metal originating from natural processes and anthropogenic activities such as coal power plants, mining, waste gas fuel, leather whipping, paint, and battery factories, which has adverse effects on the ecosystem and the health of human beings. Hence, the studies about investigating the remediation of Pb pollution have aroused extensive attention. Microbial remediation has the advantages of lower cost, higher efficiency, and less impact on the environment. This paper represented a review on the mechanism of biomineralization using microbial-induced precipitation for immobilizing Pb(II), including microbial-induced carbonate precipitation (MICP), microbial-induced phosphate precipitation (MIPP), and direct mineralization. The main mechanisms including biosorption, bioaccumulation, complexation, and biomineralization could decrease Pb(II) concentrations and convert exchangeable state into less toxic residual state. We also discuss the factors that govern methods for the bioremediation of Pb such as microbe characteristics, pH, temperature, and humic substances. Based on the above reviews, we provide a scientific basis for the remediation performance of microbial-induced precipitation technique and theoretical guidance for the application of Pb(II) remediation in soils and wastewater.

Alleviation of lead toxicity and phytostimulation in perennial ryegrass by the Pb-resistant fungus Trichoderma asperellum SD-5

Lead (Pb), a highly toxic metal ion, is detrimental to plants and humans. Existing botanical techniques for Pb-contaminated soil remediation are limited in their efficiency. Here, we investigated the use of the fungus Trichoderma asperellum Samuels, Lieckf & Nirenberg SD-5, which we identified previously as being Pb-resistant, for phytoremediation and for its effects on plant growth, Pb adsorption, and physiological responses in perennial ryegrass (Lolium perenne L. 'Lark'). We set up four soil treatments: CK (uncontaminated by Pb), T1 (1000 mg kg-1 Pb), T2 (1:9 ratio of sawdust to T1), and T3 (T2 inoculated with T. asperellum SD-5). A pot experiment revealed that the addition of the Pb-resistant microorganism promoted growth and increased biomass in ryegrass under Pb stress, in addition to significantly enhancing photosynthesis by increasing the leaf chlorophyll content and improving the total protein content and expression of the pAPX, POD, SOD, and GPX genes, evidence of an improved antioxidant system and the alleviation of Pb stress. We demonstrated that Pb-resistant microorganisms can enhance Pb extraction from the soil, thus improving remediation. Mitigation mechanisms operating at the physiological and gene expression levels were also determined, providing a scientific basis for the role of combined plant-microorganism methods in remediating Pb-contaminated soil.

Green synthesis of stable Fe,Cu oxide nanocomposites from loquat leaf extracts for removal of Norfloxacin and Ciprofloxacin

Mass production of nanomaterials to remove pollutants from water still faces many challenges, mainly due to the complexity of the synthesis methods involved and the use of dangerous reagents. The green method of preparation of nanomaterials from plants can effectively solve these problems. Fe,Cu oxide nanocomposites (Fe-Cu-NCs) were synthesized by a green and single-step method using loquat leaf extracts, and were used as an adsorbent for removal of Norfloxacin (NOR) and Ciprofloxacin (CIP) from aqueous solution. The synthesized adsorbent showed excellent adsorption properties for NOR and CIP. The experimental equilibrium data fitted the Redlich-Peterson and Koble-Corrigan models well and the maximum adsorption capacities of Fe-Cu-NCs calculated by the Langmuir model for NOR and CIP were 1.182 mmol/g and 1.103 mmol/g, respectively, at 293 K. Additionally, the morphologies and properties of Fe-Cu-NCs were characterized by transmission electron microscopy (TEM), scanning electron microscopy X-ray energy-dispersive spectroscopy (SEM-EDS), X-ray photoelectron spectroscopy (XPS), X-ray diffraction (XRD) and Fourier transform infrared spectroscopy (FTIR) analysis and the adsorption mechanism of NOR and CIP onto Fe-Cu-NCs was discussed. Thermodynamic parameters revealed that the adsorption process was spontaneous and endothermic. This study indicated that Fe-Cu-NCs are a potential adsorbent and provide a simple and convenient strategy for the purification of antibiotics-laden wastewater.