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Cappelletti D, Falcinelli S, Pirani F. The dawn of hydrogen and halogen bonds and their crucial role in collisional processes probing long-range intermolecular interactions. Phys Chem Chem Phys 2024; 26:7971-7987. [PMID: 38411471 DOI: 10.1039/d3cp05871a] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 02/28/2024]
Abstract
This perspective review focuses on the results of an internally consistent study developed in the Perugia laboratory, centered on the fundamental interaction components that, at large intermolecular distances, determine the formation of weak intermolecular hydrogen (HB) and halogen (XB) bonds. This investigation exploits old and novel molecular beam scattering experiments involving several gaseous prototypical systems. In particular, we focus on the kinetic energy dependence of the total (elastic + inelastic) integral cross-sections. Of particular interest is the measure of quantum interference patterns in the energy dependence of cross-sections of targeted systems and their shift compared to that of known reference systems. We interpreted these findings as interaction energy stabilization components, such as charge transfer, σ-hole, and polar flattening, that emerge at intermediate separation distance ranges and selectively manifest for specific geometries of collision complexes. Another significant observable we discuss is the absolute value of the cross-section and its dependence on permanent multipole moments of the collisional partners. Specifically, we show how the spontaneous orientation of rotationally cold and polar molecules, due to the electric field gradient associated with the interaction between permanent multipole moments, can significantly modify the magnitude of the total cross-section, even at high values of the impact parameter. We are confident that the present results can help extend the force field formulation to various interacting systems and carry out molecular dynamics simulations under conditions of application interest.
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Affiliation(s)
- David Cappelletti
- Dipartimento di Chimica, Biologia e Biotecnologie, Università degli Studi di Perugia, via Elce di Sotto 8, 06123 Perugia, Italy.
| | - Stefano Falcinelli
- Dipartimento di Ingegneria Civile ed Ambientale, Università degli Studi di Perugia, via G. Duranti 93, 06215 Perugia, Italy
| | - Fernando Pirani
- Dipartimento di Chimica, Biologia e Biotecnologie, Università degli Studi di Perugia, via Elce di Sotto 8, 06123 Perugia, Italy.
- Dipartimento di Ingegneria Civile ed Ambientale, Università degli Studi di Perugia, via G. Duranti 93, 06215 Perugia, Italy
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Conformer Selection by Electrostatic Hexapoles: A Theoretical Study on 1-Chloroethanol and 2-Chloroethanol. Symmetry (Basel) 2022. [DOI: 10.3390/sym14020317] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/10/2022] Open
Abstract
The electrostatic hexapole is a versatile device that has been used for many years in gas-phase experiments. Its inhomogeneous electric field has been employed for many purposes such as the selection of rotational states, the selection of clusters, the focusing of molecular beams, and molecular alignment as a precursor for molecular orientation. In the last few years, the hexapolar electric field has been demonstrated to be able to control the conformer composition of molecular beams. The key point is that conformers, where the component of the permanent electric dipole moment with respect to the largest of the principal axes of inertia is close to zero, require more intense hexapolar electric fields to be focused with respect to the other conformers. Here, we simulated the focusing curves of the conformers of 1-chloroethanol and 2-chloroethanol under hypothetical beam conditions, identical for all conformers, in a hypothetical and realistic experimental setup with three different hexapole lengths: 0.5, 1, and 2 m. The objective was to characterize this selection process to set up collision experiments on conformer-selected beams that provide information on the van der Waals clusters formed in collision processes.
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Palazzetti F, Cappelletti D, Coletti C, Falcinelli S, Pirani F. Molecular beam scattering experiments on noble gas-propylene oxide: Total integral cross sections and potential energy surfaces of He- and Ne-C 3H 6O. J Chem Phys 2021; 155:234301. [PMID: 34937350 DOI: 10.1063/5.0073737] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/04/2023] Open
Abstract
The interactions of He and Ne with propylene oxide have been investigated with the molecular beam technique by measuring the total (elastic + inelastic) integral cross section as a function of collision velocity. Starting from the analysis of these experimental data, potential energy surfaces, formulated as a function of the separation distance and orientation of propylene oxide with respect to the interacting partners, have been built: The average depth of potential wells (located at intermediate separation distances) has been characterized by analyzing the observed "glory" quantum effects, and the strength of long-range attractions has been obtained from the magnitude and the velocity dependence of the smooth component of measured cross sections. The surfaces, tested and improved against new ab initio calculations of minima interaction energies at the complete basis set level of theory, are defined in the full space of relative configurations. This represents a crucial condition to provide force fields useful to carry out, in general, important molecular property simulations and to evaluate, in the present case, the spectroscopic features and the dynamical selectivity of weakly bound complexes formed by propylene oxide, a prototype chiral species, during collisions in interstellar clouds and winds, in the space and planetary atmospheres. The adopted formulation of the interaction can be readily extended to similar systems, involving heavier noble gases or diatomic molecules (H2, O2, and N2) as well as to propylene oxide dimers.
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Affiliation(s)
- Federico Palazzetti
- Dipartimento di Chimica, Biologia e Biotecnologie - Università degli Studi di Perugia, Perugia, Italy
| | - David Cappelletti
- Dipartimento di Chimica, Biologia e Biotecnologie - Università degli Studi di Perugia, Perugia, Italy
| | - Cecilia Coletti
- Dipartimento di Farmacia, Università degli Studi "G. D'Annunzio" Chieti-Pescara, Chieti, Italy
| | - Stefano Falcinelli
- Dipartimento di Ingegneria Civile ed Ambientale, Università degli Studi di Perugia, Perugia, Italy
| | - Fernando Pirani
- Dipartimento di Chimica, Biologia e Biotecnologie - Università degli Studi di Perugia, Perugia, Italy
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Molecular beam scattering experiments probing the interaction of Cl2 with simple molecules (D2, O2, D2O, ND3). Chem Phys Lett 2021. [DOI: 10.1016/j.cplett.2021.138521] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/22/2022]
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Wang R, Wang Z, Yu X, Li Q. Synergistic and Diminutive Effects between Regium and Aerogen Bonds. Chemphyschem 2020; 21:2426-2431. [PMID: 32889745 DOI: 10.1002/cphc.202000720] [Citation(s) in RCA: 12] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/19/2020] [Revised: 09/03/2020] [Indexed: 11/07/2022]
Abstract
The aerogen bond is formed in complexes of HCN-XeF2 O and C2 H4 -XeF2 O. The lone pair on the N atom of HCN is a better electron donor in the aerogen bond than the π electron on the C=C bond of C2 H4 . The coinage substitution strengthens the aerogen bond in MCN-XeF2 O (M=Cu, Ag, and Au) and its enhancing effect becomes larger in the Au<Cu<Ag pattern. The aerogen bond is further enhanced by the regium bond in C2 H2 -MCN-XeF2 O and C2 H4 -MCN-XeF2 O, but is weakened by the regium bond in MCN-C2 H4 -XeF2 O and C2 (CN)4 -MCN-XeF2 O. Simultaneously, the regium bond is also strengthened or weakened in these triads. The synergistic and diminutive effects between regium and aerogen bonds have been explained by means of charge transfer and electrostatic potentials.
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Affiliation(s)
- Ruijing Wang
- Laboratory of Theoretical and Computational Chemistry, and School of Chemistry and Chemical Engineering, Yantai University, Yantai, 264005, China
| | - Zheng Wang
- Laboratory of Theoretical and Computational Chemistry, and School of Chemistry and Chemical Engineering, Yantai University, Yantai, 264005, China
| | - Xuefang Yu
- Laboratory of Theoretical and Computational Chemistry, and School of Chemistry and Chemical Engineering, Yantai University, Yantai, 264005, China
| | - Qingzhong Li
- Laboratory of Theoretical and Computational Chemistry, and School of Chemistry and Chemical Engineering, Yantai University, Yantai, 264005, China
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Nunzi F, Pannacci G, Tarantelli F, Belpassi L, Cappelletti D, Falcinelli S, Pirani F. Leading Interaction Components in the Structure and Reactivity of Noble Gases Compounds. Molecules 2020; 25:molecules25102367. [PMID: 32443725 PMCID: PMC7287633 DOI: 10.3390/molecules25102367] [Citation(s) in RCA: 12] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/27/2020] [Revised: 05/15/2020] [Accepted: 05/19/2020] [Indexed: 12/12/2022] Open
Abstract
The nature, strength, range and role of the bonds in adducts of noble gas atoms with both neutral and ionic partners have been investigated by exploiting a fine-tuned integrated phenomenological–theoretical approach. The identification of the leading interaction components in the noble gases adducts and their modeling allows the encompassing of the transitions from pure noncovalent to covalent bound aggregates and to rationalize the anomalous behavior (deviations from noncovalent type interaction) pointed out in peculiar cases. Selected adducts affected by a weak chemical bond, as those promoting the formation of the intermolecular halogen bond, are also properly rationalized. The behavior of noble gas atoms excited in their long-life metastable states, showing a strongly enhanced reactivity, has been also enclosed in the present investigation.
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Affiliation(s)
- Francesca Nunzi
- Dipartimento di Chimica, Biologia e Biotecnologie, via Elce di Sotto 8, I-06123 Perugia, Italy; (G.P.); (F.T.); (D.C.)
- Istituto CNR di Scienze e Tecnologie Chimiche “Giulio Natta” (CNR-SCITEC), via Elce di Sotto, I-06123 Perugia, Italy;
- Correspondence: (F.N.); (F.P.)
| | - Giacomo Pannacci
- Dipartimento di Chimica, Biologia e Biotecnologie, via Elce di Sotto 8, I-06123 Perugia, Italy; (G.P.); (F.T.); (D.C.)
| | - Francesco Tarantelli
- Dipartimento di Chimica, Biologia e Biotecnologie, via Elce di Sotto 8, I-06123 Perugia, Italy; (G.P.); (F.T.); (D.C.)
- Istituto CNR di Scienze e Tecnologie Chimiche “Giulio Natta” (CNR-SCITEC), via Elce di Sotto, I-06123 Perugia, Italy;
| | - Leonardo Belpassi
- Istituto CNR di Scienze e Tecnologie Chimiche “Giulio Natta” (CNR-SCITEC), via Elce di Sotto, I-06123 Perugia, Italy;
| | - David Cappelletti
- Dipartimento di Chimica, Biologia e Biotecnologie, via Elce di Sotto 8, I-06123 Perugia, Italy; (G.P.); (F.T.); (D.C.)
| | - Stefano Falcinelli
- Dipartimento di Ingegneria Civile ed Ambientale, Università degli Studi di Perugia, via G. Duranti 93, 06215 Perugia, Italy;
| | - Fernando Pirani
- Dipartimento di Chimica, Biologia e Biotecnologie, via Elce di Sotto 8, I-06123 Perugia, Italy; (G.P.); (F.T.); (D.C.)
- Istituto CNR di Scienze e Tecnologie Chimiche “Giulio Natta” (CNR-SCITEC), via Elce di Sotto, I-06123 Perugia, Italy;
- Correspondence: (F.N.); (F.P.)
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Vieira LR, de Brito SF, Barbosa MR, Lopes TO, Machado DFS, de Oliveira HCB. Non-covalent interactions and their impact on the complexation thermodynamics of noble gases with methanol. Phys Chem Chem Phys 2020; 22:17171-17180. [DOI: 10.1039/d0cp01416h] [Citation(s) in RCA: 5] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/30/2023]
Abstract
Accurate ab initio calculations provide the reliable information needed to study the potential energy surfaces that control the non-covalent interactions (NCIs) responsible for the formation of weak van der Waals complexes.
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Affiliation(s)
- Lúcio Renan Vieira
- Laboratório de Modelagem de Sistemas Complexos (LMSC)
- Instituto de Química
- Universidade de Brasília
- Brasília
- Brazil
| | - Sandro Francisco de Brito
- Laboratório de Modelagem de Sistemas Complexos (LMSC)
- Instituto de Química
- Universidade de Brasília
- Brasília
- Brazil
| | - Mateus Rodrigues Barbosa
- Laboratório de Modelagem de Sistemas Complexos (LMSC)
- Instituto de Química
- Universidade de Brasília
- Brasília
- Brazil
| | - Thiago Oliveira Lopes
- Laboratório de Modelagem de Sistemas Complexos (LMSC)
- Instituto de Química
- Universidade de Brasília
- Brasília
- Brazil
| | | | - Heibbe Cristhian B. de Oliveira
- Laboratório de Estrutura Eletrônica e Dinâmica Molecular (LEEDMOL)
- Instituto de Química
- Universidade Federal de Goiás
- Goiânia
- Brazil
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Nunzi F, Di Erasmo B, Tarantelli F, Cappelletti D, Pirani F. The Halogen-Bond Nature in Noble Gas-Dihalogen Complexes from Scattering Experiments and Ab Initio Calculations. Molecules 2019; 24:molecules24234274. [PMID: 31771210 PMCID: PMC6930525 DOI: 10.3390/molecules24234274] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/08/2019] [Revised: 11/21/2019] [Accepted: 11/21/2019] [Indexed: 11/16/2022] Open
Abstract
In order to clarify the nature of the halogen bond (XB), we considered the prototype noble gas–dihalogen molecule (Ng–X2) systems, focusing on the nature, range, and strength of the interaction. We exploited data gained from molecular beam scattering experiments with the measure of interference effects to obtain a suitable formulation of the interaction potential, with the support of high-level ab initio calculations, and charge displacement analysis. The essential interaction components involved in the Ng–X2 adducts were characterized, pointing at their critical balance in the definition of the XB. Particular emphasis is devoted to the energy stability of the orientational Ng–X2 isomers, the barrier for the X2 hindered rotation, and the influence of the X2 electronic state. The present integrated study returns reliable force fields for molecular dynamic simulations in Ng–X2 complexes that can be extended to systems with increasing complexity and whose properties depend on the selective formation of XB.
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Affiliation(s)
- Francesca Nunzi
- Dipartimento di Chimica, Biologia e Biotecnologie, via Elce di Sotto 8, I-06123 Perugia, Italy; (B.D.E.); (F.T.); (D.C.)
- Istituto CNR di Scienze e Tecnologie Chimiche “Giulio Natta” (CNR-SCITEC), via Elce di Sotto, I-06123 Perugia, Italy
- Correspondence: (F.N.); (F.P.)
| | - Benedetta Di Erasmo
- Dipartimento di Chimica, Biologia e Biotecnologie, via Elce di Sotto 8, I-06123 Perugia, Italy; (B.D.E.); (F.T.); (D.C.)
| | - Francesco Tarantelli
- Dipartimento di Chimica, Biologia e Biotecnologie, via Elce di Sotto 8, I-06123 Perugia, Italy; (B.D.E.); (F.T.); (D.C.)
- Istituto CNR di Scienze e Tecnologie Chimiche “Giulio Natta” (CNR-SCITEC), via Elce di Sotto, I-06123 Perugia, Italy
| | - David Cappelletti
- Dipartimento di Chimica, Biologia e Biotecnologie, via Elce di Sotto 8, I-06123 Perugia, Italy; (B.D.E.); (F.T.); (D.C.)
| | - Fernando Pirani
- Dipartimento di Chimica, Biologia e Biotecnologie, via Elce di Sotto 8, I-06123 Perugia, Italy; (B.D.E.); (F.T.); (D.C.)
- Correspondence: (F.N.); (F.P.)
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