Aerobic Respiration and Its Regulation in the Metal Reducer Shewanella oneidensis

Decoupling microbial iron reduction from anoxic microsite formation in oxic sediments: a microscale investigation through microfluidic models

Iron (Fe) reduction is one of the oldest microbial processes on Earth. After the atmosphere and ocean became oxygenated, this anaerobic process was relegated to niche anoxic environments. However, evidence of Fe reduction in oxic, partially saturated subsurface systems, such as soils and vadose zones, has been reported, with the common explanation being the formation of anoxic microsites that remain undetected by bulk measurements. To explore how microscale oxygen concentrations regulate microbial Fe reduction, we cultivated a facultative Fe-reducing bacterium using a microfluidic setup integrated with transparent planar oxygen sensors. Contrary to expectations, Fe reduction occurred under fully oxic conditions, without the formation of anoxic microsites. Our results suggest that microbially mediated Fe-reduction could be more widespread in oxic subsurface environments than previously assumed. Moreover, our mathematical modeling of oxygen dynamics around biomass-rich layers revealed that the onset of anoxia is mainly controlled by biomass spatial organization rather than the conventionally used water saturation index. This opens a new perspective on the proxies needed to predict anoxic microsite formation and Fe(III) reduction occurrence.

Versatile mechanisms and enhanced strategies of pollutants removal mediated by Shewanella oneidensis: A review

The removal of environmental pollutants is important for a sustainable ecosystem and human health. Shewanella oneidensis (S. oneidensis) has diverse electron transfer pathways and can use a variety of contaminants as electron acceptors or electron donors. This paper reviews S. oneidensis's function in removing environmental pollutants, including heavy metals, inorganic non-metallic ions (INMIs), and toxic organic pollutants. S. oneidensis can mineralize o-xylene (OX), phenanthrene (PHE), and pyridine (Py) as electron donors, and also reduce azo dyes, nitro aromatic compounds (NACs), heavy metals, and iodate by extracellular electron transfer (EET). For azo dyes, NACs, Cr(VI), nitrite, nitrate, thiosulfate, and sulfite that can cross the membrane, S. oneidensis transfers electrons to intracellular reductases to catalyze their reduction. However, most organic pollutants cannot be directly degraded by S. oneidensis, but S. oneidensis can remove these pollutants by self-synthesizing catalysts or photocatalysts, constructing bio-photocatalytic systems, driving Fenton reactions, forming microbial consortia, and genetic engineering. However, the industrial-scale application of S. oneidensis is insufficient. Future research on the metabolism of S. oneidensis and interfacial reactions with other materials needs to be deepened, and large-scale reactors should be developed that can be used for practical engineering applications.