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Klingström T, Zonabend König E, Zwane AA. Beyond the hype: using AI, big data, wearable devices, and the internet of things for high-throughput livestock phenotyping. Brief Funct Genomics 2025; 24:elae032. [PMID: 39158344 PMCID: PMC11735752 DOI: 10.1093/bfgp/elae032] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/21/2024] [Revised: 07/19/2024] [Accepted: 08/01/2024] [Indexed: 08/20/2024] Open
Abstract
Phenotyping of animals is a routine task in agriculture which can provide large datasets for the functional annotation of genomes. Using the livestock farming sector to study complex traits enables genetics researchers to fully benefit from the digital transformation of society as economies of scale substantially reduces the cost of phenotyping animals on farms. In the agricultural sector genomics has transitioned towards a model of 'Genomics without the genes' as a large proportion of the genetic variation in animals can be modelled using the infinitesimal model for genomic breeding valuations. Combined with third generation sequencing creating pan-genomes for livestock the digital infrastructure for trait collection and precision farming provides a unique opportunity for high-throughput phenotyping and the study of complex traits in a controlled environment. The emphasis on cost efficient data collection mean that mobile phones and computers have become ubiquitous for cost-efficient large-scale data collection but that the majority of the recorded traits can still be recorded manually with limited training or tools. This is especially valuable in low- and middle income countries and in settings where indigenous breeds are kept at farms preserving more traditional farming methods. Digitalization is therefore an important enabler for high-throughput phenotyping for smaller livestock herds with limited technology investments as well as large-scale commercial operations. It is demanding and challenging for individual researchers to keep up with the opportunities created by the rapid advances in digitalization for livestock farming and how it can be used by researchers with or without a specialization in livestock. This review provides an overview of the current status of key enabling technologies for precision livestock farming applicable for the functional annotation of genomes.
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Affiliation(s)
- Tomas Klingström
- Department of Animal Biosciences, Swedish University of Agricultural Sciences, Uppsala, Sweden
| | | | - Avhashoni Agnes Zwane
- Department of Biochemistry, Genetics and Microbiology, University of Pretoria, Pretoria, South Africa
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2
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Reza MN, Lee KH, Habineza E, Samsuzzaman, Kyoung H, Choi YK, Kim G, Chung SO. RGB-based machine vision for enhanced pig disease symptoms monitoring and health management: a review. JOURNAL OF ANIMAL SCIENCE AND TECHNOLOGY 2025; 67:17-42. [PMID: 39974778 PMCID: PMC11833201 DOI: 10.5187/jast.2024.e111] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 10/16/2024] [Revised: 11/15/2024] [Accepted: 11/18/2024] [Indexed: 02/21/2025]
Abstract
The growing demands of sustainable, efficient, and welfare-conscious pig husbandry have necessitated the adoption of advanced technologies. Among these, RGB imaging and machine vision technology may offer a promising solution for early disease detection and proactive disease management in advanced pig husbandry practices. This review explores innovative applications for monitoring disease symptoms by assessing features that directly or indirectly indicate disease risk, as well as for tracking body weight and overall health. Machine vision and image processing algorithms enable for the real-time detection of subtle changes in pig appearance and behavior that may signify potential health issues. Key indicators include skin lesions, inflammation, ocular and nasal discharge, and deviations in posture and gait, each of which can be detected non-invasively using RGB cameras. Moreover, when integrated with thermal imaging, RGB systems can detect fever, a reliable indicator of infection, while behavioral monitoring systems can track abnormal posture, reduced activity, and altered feeding and drinking habits, which are often precursors to illness. The technology also facilitates the analysis of respiratory symptoms, such as coughing or sneezing (enabling early identification of respiratory diseases, one of the most significant challenges in pig farming), and the assessment of fecal consistency and color (providing valuable insights into digestive health). Early detection of disease or poor health supports proactive interventions, reducing mortality and improving treatment outcomes. Beyond direct symptom monitoring, RGB imaging and machine vision can indirectly assess disease risk by monitoring body weight, feeding behavior, and environmental factors such as overcrowding and temperature. However, further research is needed to refine the accuracy and robustness of algorithms in diverse farming environments. Ultimately, integrating RGB-based machine vision into existing farm management systems could provide continuous, automated surveillance, generating real-time alerts and actionable insights; these can support data-driven disease prevention strategies, reducing the need for mass medication and the development of antimicrobial resistance.
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Affiliation(s)
- Md Nasim Reza
- Department of Agricultural Machinery
Engineering, Graduate School, Chungnam National University,
Daejeon 34134, Korea
- Department of Smart Agricultural Systems,
Graduate School, Chungnam National University, Daejeon 34134,
Korea
| | - Kyu-Ho Lee
- Department of Agricultural Machinery
Engineering, Graduate School, Chungnam National University,
Daejeon 34134, Korea
- Department of Smart Agricultural Systems,
Graduate School, Chungnam National University, Daejeon 34134,
Korea
| | - Eliezel Habineza
- Department of Smart Agricultural Systems,
Graduate School, Chungnam National University, Daejeon 34134,
Korea
| | - Samsuzzaman
- Department of Agricultural Machinery
Engineering, Graduate School, Chungnam National University,
Daejeon 34134, Korea
| | - Hyunjin Kyoung
- Division of Animal and Dairy Science,
Chungnam National University, Daejeon 34134, Korea
| | | | - Gookhwan Kim
- National Institute of Agricultural
Sciences, Rural Development Administration, Jeonju 54875,
Korea
| | - Sun-Ok Chung
- Department of Agricultural Machinery
Engineering, Graduate School, Chungnam National University,
Daejeon 34134, Korea
- Department of Smart Agricultural Systems,
Graduate School, Chungnam National University, Daejeon 34134,
Korea
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3
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Tu S, Ou H, Mao L, Du J, Cao Y, Chen W. Behavior Tracking and Analyses of Group-Housed Pigs Based on Improved ByteTrack. Animals (Basel) 2024; 14:3299. [PMID: 39595351 PMCID: PMC11591442 DOI: 10.3390/ani14223299] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/12/2024] [Revised: 11/02/2024] [Accepted: 11/04/2024] [Indexed: 11/28/2024] Open
Abstract
Daily behavioral analysis of group-housed pigs provides critical insights into early warning systems for pig health issues and animal welfare in smart pig farming. In this study, our main objective was to develop an automated method for monitoring and analyzing the behavior of group-reared pigs to detect health problems and improve animal welfare promptly. We have developed the method named Pig-ByteTrack. Our approach addresses target detection, Multi-Object Tracking (MOT), and behavioral time computation for each pig. The YOLOX-X detection model is employed for pig detection and behavior recognition, followed by Pig-ByteTrack for tracking behavioral information. In 1 min videos, the Pig-ByteTrack algorithm achieved Higher Order Tracking Accuracy (HOTA) of 72.9%, Multi-Object Tracking Accuracy (MOTA) of 91.7%, identification F1 Score (IDF1) of 89.0%, and ID switches (IDs) of 41. Compared with ByteTrack and TransTrack, the Pig-ByteTrack achieved significant improvements in HOTA, IDF1, MOTA, and IDs. In 10 min videos, the Pig-ByteTrack achieved the results with 59.3% of HOTA, 89.6% of MOTA, 53.0% of IDF1, and 198 of IDs, respectively. Experiments on video datasets demonstrate the method's efficacy in behavior recognition and tracking, offering technical support for health and welfare monitoring of pig herds.
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Affiliation(s)
- Shuqin Tu
- College of Mathematics and Informatics, South China Agricultural University, Guangzhou 510642, China; (S.T.); (H.O.); (J.D.); (Y.C.); (W.C.)
| | - Haoxuan Ou
- College of Mathematics and Informatics, South China Agricultural University, Guangzhou 510642, China; (S.T.); (H.O.); (J.D.); (Y.C.); (W.C.)
| | - Liang Mao
- Institute of Applied Artificial Intelligence of the Guangdong-Hong Kong-Macao Greater Bay Area, Shenzhen Polytechnic University, Shenzhen 518055, China
| | - Jiaying Du
- College of Mathematics and Informatics, South China Agricultural University, Guangzhou 510642, China; (S.T.); (H.O.); (J.D.); (Y.C.); (W.C.)
| | - Yuefei Cao
- College of Mathematics and Informatics, South China Agricultural University, Guangzhou 510642, China; (S.T.); (H.O.); (J.D.); (Y.C.); (W.C.)
| | - Weidian Chen
- College of Mathematics and Informatics, South China Agricultural University, Guangzhou 510642, China; (S.T.); (H.O.); (J.D.); (Y.C.); (W.C.)
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4
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Eddicks M, Feicht F, Beckjunker J, Genzow M, Alonso C, Reese S, Ritzmann M, Stadler J. Monitoring of Respiratory Disease Patterns in a Multimicrobially Infected Pig Population Using Artificial Intelligence and Aggregate Samples. Viruses 2024; 16:1575. [PMID: 39459909 PMCID: PMC11512249 DOI: 10.3390/v16101575] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/30/2024] [Revised: 10/02/2024] [Accepted: 10/04/2024] [Indexed: 10/28/2024] Open
Abstract
A 24/7 AI sound-based coughing monitoring system was applied in combination with oral fluids (OFs) and bioaerosol (AS)-based screening for respiratory pathogens in a conventional pig nursery. The objective was to assess the additional value of the AI to identify disease patterns in association with molecular diagnostics to gain information on the etiology of respiratory distress in a multimicrobially infected pig population. Respiratory distress was measured 24/7 by the AI and compared to human observations. Screening for swine influenza A virus (swIAV), porcine reproductive and respiratory disease virus (PRRSV), Mycoplasma (M.) hyopneumoniae, Actinobacillus (A.) pleuropneumoniae, and porcine circovirus 2 (PCV2) was conducted using qPCR. Except for M. hyopneumoniae, all of the investigated pathogens were detected within the study period. High swIAV-RNA loads in OFs and AS were significantly associated with a decrease in respiratory health, expressed by a respiratory health score calculated by the AI The odds of detecting PRRSV or A. pleuropneumoniae were significantly higher for OFs compared to AS. qPCR examinations of OFs revealed significantly lower Ct-values for swIAV and A. pleuropneumoniae compared to AS. In addition to acting as an early warning system, AI gained respiratory health data combined with laboratory diagnostics, can indicate the etiology of respiratory distress.
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Affiliation(s)
- Matthias Eddicks
- Clinic for Swine at the Centre for Clinical Veterinary Medicine, Ludwig-Maximilians-University München, 85764 München, Germany; (M.E.); (F.F.); (M.R.)
| | - Franziska Feicht
- Clinic for Swine at the Centre for Clinical Veterinary Medicine, Ludwig-Maximilians-University München, 85764 München, Germany; (M.E.); (F.F.); (M.R.)
| | - Jochen Beckjunker
- Boehringer Ingelheim Vetmedica GmbH, Ingelheim, 55216 Ingelheim am Rhein, Germany; (J.B.); (M.G.); (C.A.)
| | - Marika Genzow
- Boehringer Ingelheim Vetmedica GmbH, Ingelheim, 55216 Ingelheim am Rhein, Germany; (J.B.); (M.G.); (C.A.)
| | - Carmen Alonso
- Boehringer Ingelheim Vetmedica GmbH, Ingelheim, 55216 Ingelheim am Rhein, Germany; (J.B.); (M.G.); (C.A.)
| | - Sven Reese
- Institute for Anatomy, Histology and Embryology, LMU Munich, 80539 Munich, Germany;
| | - Mathias Ritzmann
- Clinic for Swine at the Centre for Clinical Veterinary Medicine, Ludwig-Maximilians-University München, 85764 München, Germany; (M.E.); (F.F.); (M.R.)
| | - Julia Stadler
- Clinic for Swine at the Centre for Clinical Veterinary Medicine, Ludwig-Maximilians-University München, 85764 München, Germany; (M.E.); (F.F.); (M.R.)
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5
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Guzman M, Geuther BQ, Sabnis GS, Kumar V. Highly accurate and precise determination of mouse mass using computer vision. PATTERNS (NEW YORK, N.Y.) 2024; 5:101039. [PMID: 39568644 PMCID: PMC11573914 DOI: 10.1016/j.patter.2024.101039] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 08/10/2023] [Revised: 02/20/2024] [Accepted: 07/11/2024] [Indexed: 11/22/2024]
Abstract
Changes in body mass are key indicators of health in humans and animals and are routinely monitored in animal husbandry and preclinical studies. In rodent studies, the current method of manually weighing the animal on a balance causes at least two issues. First, directly handling the animal induces stress, possibly confounding studies. Second, these data are static, limiting continuous assessment and obscuring rapid changes. A non-invasive, continuous method of monitoring animal mass would have utility in multiple biomedical research areas. We combine computer vision with statistical modeling to demonstrate the feasibility of determining mouse body mass by using video data. Our methods determine mass with a 4.8% error across genetically diverse mouse strains with varied coat colors and masses. This error is low enough to replace manual weighing in most mouse studies. We conclude that visually determining rodent mass enables non-invasive, continuous monitoring, improving preclinical studies and animal welfare.
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Affiliation(s)
- Malachy Guzman
- The Jackson Laboratory, Bar Harbor, ME, USA
- Carleton College, Northfield, MN, USA
| | | | | | - Vivek Kumar
- The Jackson Laboratory, Bar Harbor, ME, USA
- School of Graduate Biomedical Sciences, Tufts University School of Medicine, Boston, MA, USA
- Graduate School of Biomedical Sciences and Engineering, University of Maine, Orono, ME, USA
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6
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Pann V, Kwon KS, Kim B, Jang DH, Kim JB. DCNN for Pig Vocalization and Non-Vocalization Classification: Evaluate Model Robustness with New Data. Animals (Basel) 2024; 14:2029. [PMID: 39061490 PMCID: PMC11273863 DOI: 10.3390/ani14142029] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/02/2024] [Revised: 06/12/2024] [Accepted: 07/04/2024] [Indexed: 07/28/2024] Open
Abstract
Since pig vocalization is an important indicator of monitoring pig conditions, pig vocalization detection and recognition using deep learning play a crucial role in the management and welfare of modern pig livestock farming. However, collecting pig sound data for deep learning model training takes time and effort. Acknowledging the challenges of collecting pig sound data for model training, this study introduces a deep convolutional neural network (DCNN) architecture for pig vocalization and non-vocalization classification with a real pig farm dataset. Various audio feature extraction methods were evaluated individually to compare the performance differences, including Mel-frequency cepstral coefficients (MFCC), Mel-spectrogram, Chroma, and Tonnetz. This study proposes a novel feature extraction method called Mixed-MMCT to improve the classification accuracy by integrating MFCC, Mel-spectrogram, Chroma, and Tonnetz features. These feature extraction methods were applied to extract relevant features from the pig sound dataset for input into a deep learning network. For the experiment, three datasets were collected from three actual pig farms: Nias, Gimje, and Jeongeup. Each dataset consists of 4000 WAV files (2000 pig vocalization and 2000 pig non-vocalization) with a duration of three seconds. Various audio data augmentation techniques are utilized in the training set to improve the model performance and generalization, including pitch-shifting, time-shifting, time-stretching, and background-noising. In this study, the performance of the predictive deep learning model was assessed using the k-fold cross-validation (k = 5) technique on each dataset. By conducting rigorous experiments, Mixed-MMCT showed superior accuracy on Nias, Gimje, and Jeongeup, with rates of 99.50%, 99.56%, and 99.67%, respectively. Robustness experiments were performed to prove the effectiveness of the model by using two farm datasets as a training set and a farm as a testing set. The average performance of the Mixed-MMCT in terms of accuracy, precision, recall, and F1-score reached rates of 95.67%, 96.25%, 95.68%, and 95.96%, respectively. All results demonstrate that the proposed Mixed-MMCT feature extraction method outperforms other methods regarding pig vocalization and non-vocalization classification in real pig livestock farming.
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Affiliation(s)
| | | | | | | | - Jong-Bok Kim
- Animal Environment Division, National Institute of Animal Science, Rural Development Administration, Wanju 55365, Republic of Korea; (V.P.); (K.-s.K.); (B.K.); (D.-H.J.)
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7
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Luo Y, Xia J, Lu H, Luo H, Lv E, Zeng Z, Li B, Meng F, Yang A. Automatic Recognition and Quantification Feeding Behaviors of Nursery Pigs Using Improved YOLOV5 and Feeding Functional Area Proposals. Animals (Basel) 2024; 14:569. [PMID: 38396538 PMCID: PMC10886382 DOI: 10.3390/ani14040569] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/08/2023] [Revised: 02/05/2024] [Accepted: 02/05/2024] [Indexed: 02/25/2024] Open
Abstract
A novel method is proposed based on the improved YOLOV5 and feeding functional area proposals to identify the feeding behaviors of nursery piglets in a complex light and different posture environment. The method consists of three steps: first, the corner coordinates of the feeding functional area were set up by using the shape characteristics of the trough proposals and the ratio of the corner point to the image width and height to separate the irregular feeding area; second, a transformer module model was introduced based on YOLOV5 for highly accurate head detection; and third, the feeding behavior was recognized and counted by calculating the proportion of the head in the located feeding area. The pig head dataset was constructed, including 5040 training sets with 54,670 piglet head boxes, and 1200 test sets, and 25,330 piglet head boxes. The improved model achieves a 5.8% increase in the mAP and a 4.7% increase in the F1 score compared with the YOLOV5s model. The model is also applied to analyze the feeding pattern of group-housed nursery pigs in 24 h continuous monitoring and finds that nursing pigs have different feeding rhythms for the day and night, with peak feeding periods at 7:00-9:00 and 15:00-17:00 and decreased feeding periods at 12:00-14:00 and 0:00-6:00. The model provides a solution for identifying and quantifying pig feeding behaviors and offers a data basis for adjusting the farm feeding scheme.
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Affiliation(s)
- Yizhi Luo
- Institute of Facility Agriculture, Guangdong Academy of Agricultural Sciences, Guangzhou 510640, China; (Y.L.); (H.L.)
- State Key Laboratory of Swine and Poultry Breeding Industry, Guangzhou 510645, China; (H.L.); (E.L.); (B.L.); (F.M.)
| | - Jinjin Xia
- College of Engineering, South China Agricultural University, Guangzhou 510642, China; (J.X.); (Z.Z.)
| | - Huazhong Lu
- State Key Laboratory of Swine and Poultry Breeding Industry, Guangzhou 510645, China; (H.L.); (E.L.); (B.L.); (F.M.)
| | - Haowen Luo
- Institute of Facility Agriculture, Guangdong Academy of Agricultural Sciences, Guangzhou 510640, China; (Y.L.); (H.L.)
- State Key Laboratory of Swine and Poultry Breeding Industry, Guangzhou 510645, China; (H.L.); (E.L.); (B.L.); (F.M.)
| | - Enli Lv
- State Key Laboratory of Swine and Poultry Breeding Industry, Guangzhou 510645, China; (H.L.); (E.L.); (B.L.); (F.M.)
- College of Engineering, South China Agricultural University, Guangzhou 510642, China; (J.X.); (Z.Z.)
| | - Zhixiong Zeng
- College of Engineering, South China Agricultural University, Guangzhou 510642, China; (J.X.); (Z.Z.)
| | - Bin Li
- State Key Laboratory of Swine and Poultry Breeding Industry, Guangzhou 510645, China; (H.L.); (E.L.); (B.L.); (F.M.)
| | - Fanming Meng
- State Key Laboratory of Swine and Poultry Breeding Industry, Guangzhou 510645, China; (H.L.); (E.L.); (B.L.); (F.M.)
- Institute of Animal Science, Guangdong Academy of Agricultural Sciences, Guangzhou 510645, China
| | - Aqing Yang
- College of Computer Science, Guangdong Polytechnic Normal University, Guangzhou 510665, China
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8
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Paudel S, de Sousa RV, Sharma SR, Brown-Brandl T. Deep Learning Models to Predict Finishing Pig Weight Using Point Clouds. Animals (Basel) 2023; 14:31. [PMID: 38200761 PMCID: PMC10778518 DOI: 10.3390/ani14010031] [Citation(s) in RCA: 5] [Impact Index Per Article: 2.5] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/24/2023] [Revised: 12/16/2023] [Accepted: 12/19/2023] [Indexed: 01/12/2024] Open
Abstract
The selection of animals to be marketed is largely completed by their visual assessment, solely relying on the skill level of the animal caretaker. Real-time monitoring of the weight of farm animals would provide important information for not only marketing, but also for the assessment of health and well-being issues. The objective of this study was to develop and evaluate a method based on 3D Convolutional Neural Network to predict weight from point clouds. Intel Real Sense D435 stereo depth camera placed at 2.7 m height was used to capture the 3D videos of a single finishing pig freely walking in a holding pen ranging in weight between 20-120 kg. The animal weight and 3D videos were collected from 249 Landrace × Large White pigs in farm facilities of the FZEA-USP (Faculty of Animal Science and Food Engineering, University of Sao Paulo) between 5 August and 9 November 2021. Point clouds were manually extracted from the recorded 3D video and applied for modeling. A total of 1186 point clouds were used for model training and validating using PointNet framework in Python with a 9:1 split and 112 randomly selected point clouds were reserved for testing. The volume between the body surface points and a constant plane resembling the ground was calculated and correlated with weight to make a comparison with results from the PointNet method. The coefficient of determination (R2 = 0.94) was achieved with PointNet regression model on test point clouds compared to the coefficient of determination (R2 = 0.76) achieved from the volume of the same animal. The validation RMSE of the model was 6.79 kg with a test RMSE of 6.88 kg. Further, to analyze model performance based on weight range the pigs were divided into three different weight ranges: below 55 kg, between 55 and 90 kg, and above 90 kg. For different weight groups, pigs weighing below 55 kg were best predicted with the model. The results clearly showed that 3D deep learning on point sets has a good potential for accurate weight prediction even with a limited training dataset. Therefore, this study confirms the usability of 3D deep learning on point sets for farm animals' weight prediction, while a larger data set needs to be used to ensure the most accurate predictions.
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Affiliation(s)
- Shiva Paudel
- Department of Biological Systems Engineering, University of Nebraska-Lincoln, Lincoln, NE 68583-0726, USA; (S.P.); (S.R.S.)
| | - Rafael Vieira de Sousa
- Department of Biosystems Engineering, University of Sao Paulo, Pirassununga 13635-900, SP, Brazil;
| | - Sudhendu Raj Sharma
- Department of Biological Systems Engineering, University of Nebraska-Lincoln, Lincoln, NE 68583-0726, USA; (S.P.); (S.R.S.)
| | - Tami Brown-Brandl
- Department of Biological Systems Engineering, University of Nebraska-Lincoln, Lincoln, NE 68583-0726, USA; (S.P.); (S.R.S.)
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Voogt AM, Schrijver RS, Temürhan M, Bongers JH, Sijm DTHM. Opportunities for Regulatory Authorities to Assess Animal-Based Measures at the Slaughterhouse Using Sensor Technology and Artificial Intelligence: A Review. Animals (Basel) 2023; 13:3028. [PMID: 37835634 PMCID: PMC10571985 DOI: 10.3390/ani13193028] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/16/2023] [Revised: 09/19/2023] [Accepted: 09/20/2023] [Indexed: 10/15/2023] Open
Abstract
Animal-based measures (ABMs) are the preferred way to assess animal welfare. However, manual scoring of ABMs is very time-consuming during the meat inspection. Automatic scoring by using sensor technology and artificial intelligence (AI) may bring a solution. Based on review papers an overview was made of ABMs recorded at the slaughterhouse for poultry, pigs and cattle and applications of sensor technology to measure the identified ABMs. Also, relevant legislation and work instructions of the Dutch Regulatory Authority (RA) were scanned on applied ABMs. Applications of sensor technology in a research setting, on farm or at the slaughterhouse were reported for 10 of the 37 ABMs identified for poultry, 4 of 32 for cattle and 13 of 41 for pigs. Several applications are related to aspects of meat inspection. However, by European law meat inspection must be performed by an official veterinarian, although there are exceptions for the post mortem inspection of poultry. The examples in this study show that there are opportunities for using sensor technology by the RA to support the inspection and to give more insight into animal welfare risks. The lack of external validation for multiple commercially available systems is a point of attention.
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Affiliation(s)
- Annika M. Voogt
- Office for Risk Assessment & Research (BuRO), Netherlands Food and Consumer Product Safety Authority (NVWA), P.O. Box 43006, 3540 AA Utrecht, The Netherlands
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10
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Park SO, Seo KH. Digital livestock systems and probiotic mixtures can improve the growth performance of swine by enhancing immune function, cecal bacteria, short-chain fatty acid, and nutrient digestibility. Front Vet Sci 2023; 10:1126064. [PMID: 37035810 PMCID: PMC10079995 DOI: 10.3389/fvets.2023.1126064] [Citation(s) in RCA: 2] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/20/2022] [Accepted: 02/23/2023] [Indexed: 04/11/2023] Open
Abstract
In response to climate change, the use of digital livestock systems and probiotic mixtures as technological strategies to improve animal health and production is driving new innovations in the farm animal industry. However, there is little information available regarding the effects of digital livestock systems and probiotic mixtures (consisting of Bacillus subtillus, Streptomyces galilaeus, and Sphingobacteriaceae) on the growth performance of the growth-finishing swine. Thus, the objective of this study was to investigate the effects of digital livestock systems and probiotic mixtures on the immune function, cecal bacteria, short-chain fatty acids, nutrient digestibility, and growth performance of growth-finishing swine. A total of 64 crossbred male swine (Duroc × Landrace × Yorkshire, average body weight: 60.17 ± 1.25 kg) were randomly assigned to four treatment groups: CON (control group with a conventional livestock system without a probiotic mixture), CON0.4 (a conventional livestock system with a 0.4% probiotic mixture), DLSC (a digital livestock system without a probiotic mixture), and DLS0.4 (a digital livestock system with a 0.4% probiotic mixture). The swine were reared under standard environmental conditions until their average body weight reached 110 kg. The results indicated that the growth performance of the swine improved with an increase in nutrient digestibility and immune function via modulation of blood immune markers in the group with a digital livestock system compared to the CON group, although the growth performance of the swine was similar between the DLSC and CON0.4 groups. Moreover, the application of the digital livestock system and the probiotic mixture maintained higher levels of Lactobacillus and balanced short-chain fatty acid profiles compared to the CON group. These results suggest that a digital livestock system and a probiotic mixture can improve the growth performance of swine by enhancing their nutrient digestibility, improving their immune function, and maintaining balanced cecal bacteria and short-chain fatty acids. Therefore, this study provides insights into the application of digital livestock systems and probiotic mixtures as a climate change response strategy to improve swine production.
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Affiliation(s)
- Sang-O Park
- College of Animal Life Science, Kangwon National University, Chuncheon, Republic of Korea
- *Correspondence: Sang-O Park
| | - Kyung-Hoon Seo
- Hooin Ecobio Institute, Hongseong-gun, Chungcheongnam-do, Republic of Korea
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11
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Gómez-Prado J, Pereira AMF, Wang D, Villanueva-García D, Domínguez-Oliva A, Mora-Medina P, Hernández-Avalos I, Martínez-Burnes J, Casas-Alvarado A, Olmos-Hernández A, Ramírez-Necoechea R, Verduzco-Mendoza A, Hernández A, Torres F, Mota-Rojas D. Thermoregulation mechanisms and perspectives for validating thermal windows in pigs with hypothermia and hyperthermia: An overview. Front Vet Sci 2022; 9:1023294. [PMID: 36532356 PMCID: PMC9751486 DOI: 10.3389/fvets.2022.1023294] [Citation(s) in RCA: 21] [Impact Index Per Article: 7.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/19/2022] [Accepted: 11/17/2022] [Indexed: 12/05/2022] Open
Abstract
Specific anatomical characteristics make the porcine species especially sensitive to extreme temperature changes, predisposing them to pathologies and even death due to thermal stress. Interest in improving animal welfare and porcine productivity has led to the development of various lines of research that seek to understand the effect of certain environmental conditions on productivity and the impact of implementing strategies designed to mitigate adverse effects. The non-invasive infrared thermography technique is one of the tools most widely used to carry out these studies, based on detecting changes in microcirculation. However, evaluations using this tool require reliable thermal windows; this can be challenging because several factors can affect the sensitivity and specificity of the regions selected. This review discusses the thermal windows used with domestic pigs and the association of thermal changes in these regions with the thermoregulatory capacity of piglets and hogs.
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Affiliation(s)
- Jocelyn Gómez-Prado
- Neurophysiology, Behavior and Animal Welfare Assessment, DPAA, Xochimilco Campus, Universidad Autónoma Metropolitana, Mexico City, Mexico
| | - Alfredo M. F. Pereira
- Mediterranean Institute for Agriculture, Environment and Development (MED), Institute for Advanced Studies and Research, Universidade de Évora, Polo da Mitra, Évora, Portugal
| | - Dehua Wang
- School of Life Sciences, Shandong University, Qingdao, China
| | - Dina Villanueva-García
- Division of Neonatology, Hospital Infantil de México Federico Gómez, Mexico City, Mexico
| | - Adriana Domínguez-Oliva
- Neurophysiology, Behavior and Animal Welfare Assessment, DPAA, Xochimilco Campus, Universidad Autónoma Metropolitana, Mexico City, Mexico
| | - Patricia Mora-Medina
- Facultad de Estudios Superiores Cuautitlán, Universidad Nacional Autónoma de México, Mexico City, Mexico
| | - Ismael Hernández-Avalos
- Facultad de Estudios Superiores Cuautitlán, Universidad Nacional Autónoma de México, Mexico City, Mexico
| | - Julio Martínez-Burnes
- Animal Health Group, Facultad de Medicina Veterinaria y Zootecnia, Universidad Autónoma de Tamaulipas, Ciudad Victoria, Mexico
| | - Alejandro Casas-Alvarado
- Neurophysiology, Behavior and Animal Welfare Assessment, DPAA, Xochimilco Campus, Universidad Autónoma Metropolitana, Mexico City, Mexico
| | - Adriana Olmos-Hernández
- Division of Biotechnology—Bioterio and Experimental Surgery, Instituto Nacional de Rehabilitación-Luis Guillermo Ibarra Ibarra, Mexico City, Mexico
| | - Ramiro Ramírez-Necoechea
- Neurophysiology, Behavior and Animal Welfare Assessment, DPAA, Xochimilco Campus, Universidad Autónoma Metropolitana, Mexico City, Mexico
| | - Antonio Verduzco-Mendoza
- Division of Biotechnology—Bioterio and Experimental Surgery, Instituto Nacional de Rehabilitación-Luis Guillermo Ibarra Ibarra, Mexico City, Mexico
| | - Astrid Hernández
- Neurophysiology, Behavior and Animal Welfare Assessment, DPAA, Xochimilco Campus, Universidad Autónoma Metropolitana, Mexico City, Mexico
| | - Fabiola Torres
- Neurophysiology, Behavior and Animal Welfare Assessment, DPAA, Xochimilco Campus, Universidad Autónoma Metropolitana, Mexico City, Mexico
| | - Daniel Mota-Rojas
- Neurophysiology, Behavior and Animal Welfare Assessment, DPAA, Xochimilco Campus, Universidad Autónoma Metropolitana, Mexico City, Mexico
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12
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Rosengart S, Chuppava B, Trost LS, Henne H, Tetens J, Traulsen I, Deermann A, Wendt M, Visscher C. Characteristics of thermal images of the mammary gland and of performance in sows differing in health status and parity. Front Vet Sci 2022; 9:920302. [PMID: 36118336 PMCID: PMC9480095 DOI: 10.3389/fvets.2022.920302] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/18/2022] [Accepted: 08/09/2022] [Indexed: 11/13/2022] Open
Abstract
Precision livestock farming can combine sensors and complex data to provide a simple score of meaningful productivity, pig welfare, and farm sustainability, which are the main drivers of modern pig production. Examples include using infrared thermography to monitor the temperature of sows to detect the early stages of the disease. To take account of these drivers, we assigned 697 hybrid (BHZP db. Viktoria) sows to four parity groups. In addition, by pooling clinical findings from every sow and their piglets, sows were classified into three groups for the annotation: healthy, clinically suspicious, and diseased. Besides, the udder was thermographed, and performance data were documented. Results showed that the piglets of diseased sows with eighth or higher parity had the lowest daily weight gain [healthy; 192 g ± 31.2, clinically suspicious; 191 g ± 31.3, diseased; 148 g ± 50.3 (p < 0.05)] and the highest number of stillborn piglets (healthy; 2.2 ± 2.39, clinically suspicious; 2.0 ± 1.62, diseased; 3.91 ± 4.93). Moreover, all diseased sows showed higher maximal skin temperatures by infrared thermography of the udder (p < 0.05). Thus, thermography coupled with Artificial Intelligence (AI) systems can help identify and orient the diagnosis of symptomatic animals to prompt adequate reaction at the earliest time.
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Affiliation(s)
- Stephan Rosengart
- Clinic for Swine and Small Ruminants, Forensic Medicine and Ambulatory Service, University of Veterinary Medicine Hannover, Foundation, Hanover, Germany
- Institute for Animal Nutrition, University of Veterinary Medicine Hannover, Foundation, Hanover, Germany
| | - Bussarakam Chuppava
- Institute for Animal Nutrition, University of Veterinary Medicine Hannover, Foundation, Hanover, Germany
| | - Lea-Sophie Trost
- Department of Animal Sciences, Livestock Systems, Georg-August-University Göttingen, Göttingen, Germany
| | | | - Jens Tetens
- Department of Animal Sciences, University of Göttingen, Göttingen, Germany
| | - Imke Traulsen
- Department of Animal Sciences, Livestock Systems, Georg-August-University Göttingen, Göttingen, Germany
| | | | - Michael Wendt
- Clinic for Swine and Small Ruminants, Forensic Medicine and Ambulatory Service, University of Veterinary Medicine Hannover, Foundation, Hanover, Germany
| | - Christian Visscher
- Institute for Animal Nutrition, University of Veterinary Medicine Hannover, Foundation, Hanover, Germany
- *Correspondence: Christian Visscher
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13
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Wang S, Jiang H, Qiao Y, Jiang S, Lin H, Sun Q. The Research Progress of Vision-Based Artificial Intelligence in Smart Pig Farming. SENSORS (BASEL, SWITZERLAND) 2022; 22:s22176541. [PMID: 36080994 PMCID: PMC9460267 DOI: 10.3390/s22176541] [Citation(s) in RCA: 12] [Impact Index Per Article: 4.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 07/27/2022] [Revised: 08/22/2022] [Accepted: 08/27/2022] [Indexed: 05/05/2023]
Abstract
Pork accounts for an important proportion of livestock products. For pig farming, a lot of manpower, material resources and time are required to monitor pig health and welfare. As the number of pigs in farming increases, the continued use of traditional monitoring methods may cause stress and harm to pigs and farmers and affect pig health and welfare as well as farming economic output. In addition, the application of artificial intelligence has become a core part of smart pig farming. The precision pig farming system uses sensors such as cameras and radio frequency identification to monitor biometric information such as pig sound and pig behavior in real-time and convert them into key indicators of pig health and welfare. By analyzing the key indicators, problems in pig health and welfare can be detected early, and timely intervention and treatment can be provided, which helps to improve the production and economic efficiency of pig farming. This paper studies more than 150 papers on precision pig farming and summarizes and evaluates the application of artificial intelligence technologies to pig detection, tracking, behavior recognition and sound recognition. Finally, we summarize and discuss the opportunities and challenges of precision pig farming.
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Affiliation(s)
- Shunli Wang
- College of Information Science and Engineering, Shandong Agricultural University, Tai’an 271018, China
| | - Honghua Jiang
- College of Information Science and Engineering, Shandong Agricultural University, Tai’an 271018, China
| | - Yongliang Qiao
- Australian Centre for Field Robotics (ACFR), Faculty of Engineering, The University of Sydney, Sydney, NSW 2006, Australia
- Correspondence:
| | - Shuzhen Jiang
- College of Animal Science and Veterinary Medicine, Shandong Agricultural University, Tai’an 271018, China
| | - Huaiqin Lin
- College of Information Science and Engineering, Shandong Agricultural University, Tai’an 271018, China
| | - Qian Sun
- College of Information Science and Engineering, Shandong Agricultural University, Tai’an 271018, China
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Prediction of Total Soluble Solids and pH of Strawberry Fruits Using RGB, HSV and HSL Colour Spaces and Machine Learning Models. Foods 2022; 11:foods11142086. [PMID: 35885329 PMCID: PMC9318015 DOI: 10.3390/foods11142086] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/06/2022] [Revised: 06/23/2022] [Accepted: 07/12/2022] [Indexed: 11/16/2022] Open
Abstract
Determination of internal qualities such as total soluble solids (TSS) and pH is a paramount concern in strawberry cultivation. Therefore, the main objective of the current study was to develop a non-destructive approach with machine learning algorithms for predicting TSS and pH of strawberries. Six hundred samples (100 samples in each ripening stage) in six ripening stages were collected randomly for measuring the biometrical characteristics, i.e., length, diameters, weight and TSS and pH values. An image of each strawberry fruit was captured for colour feature extraction using an image processing technique. Channels of each colour space (RGB, HSV and HSL) were used as input variables for developing multiple linear regression (MLR) and support vector machine regression (SVM-R) models. The result of the study indicated that SVM-R model with HSV colour space performed slightly better than MLR model for TSS and pH prediction. The HSV based SVM-R model could explain a maximum of 84.1% and 79.2% for TSS and 78.8% and 72.6% for pH of the variations in measured and predicted data in training and testing stages, respectively. Further experiments need to be conducted with different strawberry cultivars for the prediction of more internal qualities along with the improvement of model performance.
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