Transcriptomic Analysis of Hormone Signal Transduction, Carbohydrate Metabolism, Heat Shock Proteins, and SCF Complexes before and after Fertilization of Korean Pine Ovules

Endogenous Hormone Regulation During Key Developmental Stages of Pinus koraiensis Siebold & Zucc. Ovules

In this study, the morphological and anatomical characteristics of the growth of the internal ovules and the dynamic changes in the content of endogenous hormones during the development of Korean pine (Pinus koraiensis Siebold & Zucc.) cones were investigated in detail and their interrelationships determined. In addition, morphological examinations, paraffin section, analysis and enzyme immunoassays were performed to observe the growth and development as well as the fertilization stages of the ovules of P. koraiensis from July of the pollination year to June of the following year. From July of the pollination year to May of the next year, the increase in the content of indoleacetic acid (IAA) and gibberellin and a decrease in the content of abscisic acid (ABA) in the pollination year correlated with the division of the gametophyte free nuclei. It was observed that the levels of IAA, ABA, zeatin riboside (ZR) and isopentenyl adenosine (IPA) initially decreased and then increased during overwintering, which was interpreted as a symptom of adaptation of P. koraiensis ovules to low temperatures. At the end of overwintering, the increase in IPA, ZR and ABA levels was associated with the development of the female gametophyte. The week before fertilization was identified as the stage of oocyte division, in which growth-promoting hormones dominate. During the week of fertilization, the increase in the level of growth-inhibiting hormones correlated with fertilization. After fertilization, the increase in the level of growth-promoting hormones also correlated with early embryonic development. The levels of endogenous hormones were observed to change dynamically with the development of P. koraiensis oocytes, indicating their important role. The results of this study provide the morphological and anatomical basis for related studies on the development of the ovarian strobilus in gymnosperms.

Genome-wide identification and expression analysis of ARF gene family in embryonic development of Korean pine (Pinus koraiensis)

BACKGROUND

The Auxin Responsive Factor (ARF) family plays a crucial role in mediating auxin signal transduction and is vital for plant growth and development. However, the function of ARF genes in Korean pine (Pinus koraiensis), a conifer species of significant economic value, remains unclear.

RESULTS

This study utilized the whole genome of Korean pine to conduct bioinformatics analysis, resulting in the identification of 13 ARF genes. A phylogenetic analysis revealed that these 13 PkorARF genes can be classified into 4 subfamilies, indicating the presence of conserved structural characteristics within each subfamily. Protein interaction prediction indicated that Pkor01G00962.1 and Pkor07G00704.1 may have a significant role in regulating plant growth and development as core components of the PkorARFs family. Additionally, the analysis of RNA-seq and RT-qPCR expression patterns suggested that PkorARF genes play a crucial role in the development process of Korean pine.

CONCLUSION

Pkor01G00962.1 and Pkor07G00704.1, which are core genes of the PkorARFs family, play a potentially crucial role in regulating the fertilization and developmental process of Korean pine. This study provides a valuable reference for investigating the molecular mechanism of embryonic development in Korean pine and establishes a foundation for cultivating high-quality Korean pine.