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Lue CH, Abram PK, Hrcek J, Buffington ML, Staniczenko PPA. Metabarcoding and applied ecology with hyperdiverse organisms: Recommendations for biological control research. Mol Ecol 2023; 32:6461-6473. [PMID: 36040418 DOI: 10.1111/mec.16677] [Citation(s) in RCA: 2] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/31/2022] [Revised: 08/12/2022] [Accepted: 08/22/2022] [Indexed: 11/29/2022]
Abstract
Metabarcoding is revolutionizing fundamental research in ecology by enabling large-scale detection of species and producing data that are rich with community context. However, the benefits of metabarcoding have yet to be fully realized in fields of applied ecology, especially those such as classical biological control (CBC) research that involve hyperdiverse taxa. Here, we discuss some of the opportunities that metabarcoding provides CBC and solutions to the main methodological challenges that have limited the integration of metabarcoding in existing CBC workflows. We focus on insect parasitoids, which are popular and effective biological control agents (BCAs) of invasive species and agricultural pests. Accurately identifying native, invasive and BCA species is paramount, since misidentification can undermine control efforts and lead to large negative socio-economic impacts. Unfortunately, most existing publicly accessible genetic databases cannot be used to reliably identify parasitoid species, thereby limiting the accuracy of metabarcoding in CBC research. To address this issue, we argue for the establishment of authoritative genetic databases that link metabarcoding data to taxonomically identified specimens. We further suggest using multiple genetic markers to reduce primer bias and increase taxonomic resolution. We also provide suggestions for biological control-specific metabarcoding workflows intended to track the long-term effectiveness of introduced BCAs. Finally, we use the example of an invasive pest, Drosophila suzukii, in a reflective "what if" thought experiment to explore the potential power of community metabarcoding in CBC.
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Affiliation(s)
- Chia-Hua Lue
- Department of Biology, Brooklyn College, City University of New York, New York City, New York, USA
| | - Paul K Abram
- Agriculture and Agri-Food Canada, Agassiz Research and Development Centre, Agassiz, British Columbia, Canada
| | - Jan Hrcek
- Biology Centre of the Czech Academy of Sciences, Institute of Entomology, Ceske Budejovice, Czech Republic
| | - Matthew L Buffington
- Systematic Entomology Laboratory, ARS/USDA c/o Smithsonian Institution, National Museum of Natural History, Washington, DC, USA
| | - Phillip P A Staniczenko
- Department of Biology, Brooklyn College, City University of New York, New York City, New York, USA
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2
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Abram PK, Haye T, Clarke P, Grove E, Thiessen J, Gariepy TD. Partial refuges from biological control due to intraspecific variation in protective host traits. ECOLOGICAL APPLICATIONS : A PUBLICATION OF THE ECOLOGICAL SOCIETY OF AMERICA 2023; 33:e2796. [PMID: 36502297 DOI: 10.1002/eap.2796] [Citation(s) in RCA: 1] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 04/27/2022] [Revised: 10/19/2022] [Accepted: 11/07/2022] [Indexed: 06/02/2023]
Abstract
Predicting how much of a host or prey population may be attacked by their natural enemies is fundamental to several subfields of applied ecology, particularly biological control of pest organisms. Hosts or prey can occupy refuges that prevent them from being killed by natural enemies, but habitat or ecological refuges are challenging or impossible to predict in a laboratory setting-which is often where efficacy and specificity testing of candidate biological control agents is done. Here we explore how intraspecific variation in continuous traits of individuals or groups that confer some protection from natural enemy attack-even after the natural enemy has encountered the prey-could provide partial refuges. The size of these trait-based refuges (i.e., the proportion of prey that survive natural enemy encounters due to protective traits) should depend on the relationship between trait values and host/prey susceptibility to natural enemy attack and on how common different trait values are within a host/prey population. These can be readily estimated in laboratory testing of natural enemy impact on target or nontarget prey or hosts as long as sufficient host material is available. We provide a general framework for how intraspecific variation in protective host traits could be integrated into biological control research, specifically with reference to nontarget testing as part of classical biological control programs. As a case study, we exposed different host clutch sizes of target (pest) and nontarget (native species) stink bug (Hemiptera: Pentatomidae) species to a well-studied exotic biocontrol agent, the egg parasitoid Trissolcus japonicus (Hymenoptera: Scelionidae). We predicted that the smallest and largest clutches would occupy trait-based refuges from parasitism. Although we observed several behavioral and reproductive responses to variation in host egg mass size by T. japonicus, they did not translate to increases in host survival large enough to change the conclusions of nontarget testing. We encourage researchers to investigate intraspecific variation in a wider variety of protective host and prey traits and their consequences for refuge size.
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Affiliation(s)
- Paul K Abram
- Agriculture and Agri-Food Canada, Agassiz Research and Development Centre, Agassiz, British Columbia, Canada
| | | | - Peggy Clarke
- Agriculture and Agri-Food Canada, Agassiz Research and Development Centre, Agassiz, British Columbia, Canada
| | - Emily Grove
- Agriculture and Agri-Food Canada, Agassiz Research and Development Centre, Agassiz, British Columbia, Canada
- Department of Biological Sciences, Simon Fraser University, Burnaby, British Columbia, Canada
| | - Jason Thiessen
- Agriculture and Agri-Food Canada, Agassiz Research and Development Centre, Agassiz, British Columbia, Canada
| | - Tara D Gariepy
- Agriculture and Agri-Food Canada, London Research and Development Centre, London, Ontario, Canada
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Ademokoya B, Athey K, Ruberson J. Natural Enemies and Biological Control of Stink Bugs (Hemiptera: Heteroptera) in North America. INSECTS 2022; 13:932. [PMID: 36292880 PMCID: PMC9604258 DOI: 10.3390/insects13100932] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 09/03/2022] [Revised: 10/04/2022] [Accepted: 10/05/2022] [Indexed: 06/16/2023]
Abstract
Stink bugs comprise a significant and costly pest complex for numerous crops in the US, including row crops, vegetables, and tree fruits and nuts. Most management relies on the use of broad-spectrum and disruptive insecticides with high human and environmental risks associated with them. Growing concerns about pesticide resistance in stink bugs are forcing pest managers to explore safer and more sustainable options. Here, we review the diverse suite of natural enemies of stink bugs in the US, noting that the egg and the late nymphal and adult stages of stink bugs are the most commonly attacked by parasitoids, whereas eggs and young nymphs are the stages most commonly attacked by predators. The effectiveness of stink bugs' natural enemies varies widely with stink bug species and habitats, influencing the biological control of stink bugs across crops. Historically, biological control of stink bugs has focused on introduction of exotic natural enemies against exotic stink bugs. Conservation and augmentation methods of biological control have received less attention in the US, although there may be good opportunities to utilize these approaches. We identify some considerations for the current and future use of biological control for stink bugs, including the potential for area-wide management approaches.
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Affiliation(s)
- Blessing Ademokoya
- Department of Entomology and Nematology, West Florida Research and Education Center, University of Florida, Jay, FL 32565, USA
| | - Kacie Athey
- Department of Crop Sciences, University of Illinois at Urbana-Champaign, Urbana, IL 61801, USA
| | - John Ruberson
- Department of Entomology, University of Nebraska, Lincoln, NE 68583, USA
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Yan ZC, Hua HQ, Qi GY, Li YX. Early Detection and Identification of Parasitoid Wasps Trichogramma Westwood (Hymenoptera: Trichogrammatidae) in Their Host Eggs Using Polymerase Chain Reaction-Restriction Fragment Length Polymorphism. JOURNAL OF ECONOMIC ENTOMOLOGY 2022; 115:1095-1101. [PMID: 35746894 DOI: 10.1093/jee/toac095] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 01/04/2022] [Indexed: 06/15/2023]
Abstract
Parasitoid wasps are invaluable agents in pest biological control. Early detection and identification of parasitoid immatures are vital in characterizing parasitoid-host interactions and for evaluating parasitism rates accurately in the field. Trichogramma is the most widely used parasitoid wasp, and several studies have been performed for its molecular identification. However, those studies were mainly focused on Trichogramma adults and rarely on immatures. Here, we report a method to detect and identify Trichogramma larvae in their host eggs. We designed a pair of Trichogramma-specific primers that amplified Trichogramma mtCOI sequences from Corcyra cephalonica (Stainton) eggs parasitized by any of eight Trichogramma species tested but not from nonparasitized eggs of four lepidopteran hosts. This PCR method reliably detected Trichogramma immatures in parasitized eggs as early as 1 h after parasitism. We further developed an RFLP (restriction fragment length polymorphism) assay using restriction enzymes SspI and VspI to differentiate eight Trichogramma species at their immature stage. Overall, we developed a sensitive and reliable PCR-RFLP method to detect and identify immature-stage Trichogramma in their lepidopteran hosts. This method shows promise for conveniently identifying Trichogramma in insectaries and accurately evaluating parasitism rates in the field.
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Affiliation(s)
- Zhi-Chao Yan
- Department of Entomology, Nanjing Agricultural University, 1 Weigang, Xuanwu District, Nanjing 210095, China
| | - Hai-Qing Hua
- Yangzhou Agricultural Technology Extension Center, 460 Wenchang, Yangzhou 225000, China
| | - Guang-Yuan Qi
- Department of Entomology, Nanjing Agricultural University, 1 Weigang, Xuanwu District, Nanjing 210095, China
| | - Yuan-Xi Li
- Department of Entomology, Nanjing Agricultural University, 1 Weigang, Xuanwu District, Nanjing 210095, China
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Nguyen VAT, Vural DC. Theoretical guidelines for editing ecological communities. J Theor Biol 2021; 534:110945. [PMID: 34717935 DOI: 10.1016/j.jtbi.2021.110945] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/30/2020] [Revised: 10/21/2021] [Accepted: 10/22/2021] [Indexed: 11/18/2022]
Abstract
Having control over species abundances and community resilience is of great interest for experimental, agricultural, industrial and conservation purposes. Here, we theoretically explore the possibility of manipulating ecological communities by modifying pairwise interactions. Specifically, we establish which interaction values should be modified, and by how much, in order to alter the composition or resilience of a community towards a favorable direction. While doing so, we also take into account the experimental difficulties in making such modifications by including in our optimization process, a cost parameter, which penalizes large modifications. In addition to prescribing what changes should be made to interspecies interactions given some modification cost, our approach also serves to establish the limits of community control, i.e. how well can one approach an ecological goal at best, even when not constrained by cost.
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Affiliation(s)
- Vu A T Nguyen
- University of Notre Dame, South Bend, IN, United States
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Dieckhoff C, Wenz S, Renninger M, Reißig A, Rauleder H, Zebitz CPW, Reetz J, Zimmermann O. Add Germany to the List-Adventive Population of Trissolcus japonicus (Ashmead) (Hymenoptera: Scelionidae) Emerges in Germany. INSECTS 2021; 12:insects12050414. [PMID: 34064474 PMCID: PMC8147972 DOI: 10.3390/insects12050414] [Citation(s) in RCA: 11] [Impact Index Per Article: 3.7] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 03/29/2021] [Revised: 04/23/2021] [Accepted: 04/28/2021] [Indexed: 01/06/2023]
Abstract
Simple Summary The brown marmorated stink bug, Halyomorpha halys, is an invasive pest species of global economic importance. It has a very broad host range and causes severe damages in agricultural, horticultural, and fruit crops. Control measures, including available chemical and mechanical options, have often proved insufficient. Surveys of natural enemies in the newly invaded areas have also shown that natural biological control is generally too low to control H. halys populations in the long run. In its native Asian range, egg parasitoids in the genus Trissolcus play an important role in controlling H. halys. Since the mid-2010s, adventive populations of Trissolcus japonicus, a dominant egg parasitoid of H. halys in Asia with a narrow host range, have been reported from several countries with prior establishment of H. halys. Here, we report the first discovery of T. japonicus in Germany. This finding corroborates a northbound expansion of the range of T. japonicus in Europe, along with H. halys. Abstract The brown marmorated stink bug, Halyomorpha halys, is a polyphagous pest species of worldwide economic importance. Since the mid-1990s, it has invaded and become established in various countries outside its native Asian range. In the newly invaded areas, biological control by native natural enemies has been shown to be insufficient in the long-term control of this severe pest. Adventive populations of Trissolcus japonicus, an important biological control agent of H. halys in Asia, have been reported from North America and some European countries since the mid-2010s. This egg parasitoid species seems to follow in the wake of the establishment of H. halys populations outside their native Asian range. Here, we report the first discovery of an adventive population of T. japonicus in Germany. In 2020, adult T. japonicus were recovered from parasitized H. halys egg masses (naturally laid and sentinel egg masses) and collected in ruderal areas using an insect suction sampler. The arrival of T. japonicus in Germany, unintentional through pathways yet unknown, corroborates a northbound expansion of its range within Europe. Further field surveys will show the extent of its dispersal and establishment capacities within this new distribution area.
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Affiliation(s)
- Christine Dieckhoff
- Center for Agricultural Technology Augustenberg (LTZ), Neßlerstr. 25, 76227 Karlsruhe, Germany; (H.R.); (J.R.); (O.Z.)
- Correspondence:
| | - Sophie Wenz
- Institute of Phytomedicine, University of Hohenheim, Otto-Sander-Str. 5, 70593 Stuttgart, Germany; (S.W.); (C.P.W.Z.)
| | - Maura Renninger
- Stuttgart State Museum of Natural History, Rosenstein 1, 70191 Stuttgart, Germany;
| | - Anne Reißig
- Arbeitsgemeinschaft bäuerliche Landwirtschaft (AbL, Working Group for Peasant Agriculture) Regional Association Saxony/Thuringia, Zur Burgmühle 1, 99869 Nessetal OT Haina, Germany;
| | - Helmut Rauleder
- Center for Agricultural Technology Augustenberg (LTZ), Neßlerstr. 25, 76227 Karlsruhe, Germany; (H.R.); (J.R.); (O.Z.)
| | - Claus P. W. Zebitz
- Institute of Phytomedicine, University of Hohenheim, Otto-Sander-Str. 5, 70593 Stuttgart, Germany; (S.W.); (C.P.W.Z.)
| | - Jana Reetz
- Center for Agricultural Technology Augustenberg (LTZ), Neßlerstr. 25, 76227 Karlsruhe, Germany; (H.R.); (J.R.); (O.Z.)
| | - Olaf Zimmermann
- Center for Agricultural Technology Augustenberg (LTZ), Neßlerstr. 25, 76227 Karlsruhe, Germany; (H.R.); (J.R.); (O.Z.)
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Assessing the Distribution of Exotic Egg Parasitoids of Halyomorpha halys in Europe with a Large-Scale Monitoring Program. INSECTS 2021; 12:insects12040316. [PMID: 33915993 PMCID: PMC8067160 DOI: 10.3390/insects12040316] [Citation(s) in RCA: 16] [Impact Index Per Article: 5.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 02/19/2021] [Revised: 03/24/2021] [Accepted: 03/27/2021] [Indexed: 02/06/2023]
Abstract
Simple Summary The management of invasive alien species is a very challenging task. For the brown marmorated stink bug (Halyomorpha halys), classical biological control has been identified as the most suitable method to sustainably reduce its populations in the long-term. Among its natural enemies, two species were identified as the most promising candidates for biocontrol, Trissolcus japonicus and Trissolcus mitsukurii. Populations of these two species have recently been detected in Europe and to assess their distribution, a large-scale study was performed. Combining several monitoring methods, in four months (May–September 2019), a wide area covering northern Italy and parts of Switzerland was surveyed. The results showed that both species have spread into all types of habitats where H. halys is present and the parasitization of native species was rarely observed. Among native species, Anastatus bifasciatus was the predominant parasitoid of H. halys. This study supported the development of the first release program of Tr. japonicus in Europe. Abstract The brown marmorated stink bug Halyomorpha halys is an invasive agricultural pest with a worldwide distribution. Classical biological control has been identified as the most promising method to reduce the populations of H. halys. Adventive populations of two candidates for releases, Trissolcus japonicus and Trissolcus mitsukurii, have recently been detected in Europe. To assess their distribution and abundance, a large-scale survey was performed. From May to September 2019, a wide area covering northern Italy and parts of Switzerland was surveyed, highlighting the expanding distribution of both Tr. japonicus and Tr. mitsukurii. Within four years after their first detection in Europe, both species have rapidly spread into all types of habitats where H. halys is present, showing a wide distribution and continuous expansion. Both exotic Trissolcus showed high levels of parasitism rate towards H. halys, while parasitization of non-target species was a rare event. The generalist Anastatus bifasciatus was the predominant native parasitoid of H. halys, while the emergence of native scelionids from H. halys eggs was rarely observed. The presence of the hyperparasitoid Acroclisoides sinicus was also recorded. This study provided fundamental data that supported the development of the first inoculative release program of Tr. japonicus in Europe.
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