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Wang J, Li D, Chen B. Noninvasive Detection of the Skin Structure and Inversed Retrieval of Chromophore Information Based on Diffuse Reflectance Spectroscopy. JOURNAL OF BIOPHOTONICS 2024; 17:e202400118. [PMID: 39315641 DOI: 10.1002/jbio.202400118] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 03/21/2024] [Revised: 08/24/2024] [Accepted: 08/25/2024] [Indexed: 09/25/2024]
Abstract
The detection of skin's structure lays the foundation for personalized laser surgery of vascular skin disease, which can be noninvasively achieved by diffuse reflectance spectroscopy (DRS). A two-step inverse Monte Carlo radiation method based on DRS under two source-detector separations was proposed to quantify the skin structure, including chromophore concentration (melanin f m and hemoglobin f b), epidermal thickness t epi, average vessel diameter D ves, depth d pws and thickness t pws of the vascular layer for diseased skin. The method fitted the simulated DRS to the measured DRS iteratively, differences between which were described by a specific objective function to amplify blood absorption at 500-600 nm, and D ves, d pws, and t pws were estimated based on f m, f b, and t pws fitted in the first step. The results showed that the two-step method dramatically improve the inversion accuracy with mean errors of f m, f b, t pws, and d pws less than 5%.
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Affiliation(s)
- Jinyao Wang
- State Key Laboratory of Multiphase Flow in Power Engineering, Xi'an Jiaotong University, Xi'an, China
| | - Dong Li
- State Key Laboratory of Multiphase Flow in Power Engineering, Xi'an Jiaotong University, Xi'an, China
| | - Bin Chen
- State Key Laboratory of Multiphase Flow in Power Engineering, Xi'an Jiaotong University, Xi'an, China
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Lu Q, Zou J, Ye Y, Wang Z. Research on the chemical oxygen demand spectral inversion model in water based on IPLS-GAN-SVM hybrid algorithm. PLoS One 2024; 19:e0301902. [PMID: 38603697 PMCID: PMC11008849 DOI: 10.1371/journal.pone.0301902] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/10/2023] [Accepted: 03/25/2024] [Indexed: 04/13/2024] Open
Abstract
Spectral collinearity and limited spectral datasets are the problems influencing Chemical Oxygen Demand (COD) modeling. To address the first problem and obtain optimal modeling range, the spectra are preprocessed using six methods including Standard Normal Variate, Savitzky-Golay Smoothing Filtering (SG) etc. Subsequently, the 190-350 nm spectral range is divided into 10 subintervals, and Interval Partial Least Squares (IPLS) is used to perform PLS modeling on each interval. The results indicate that it is best modeled in the 7th range (238~253 nm). The values of Mean Square Error (MSE), Mean Absolute Error (MAE) and R2score of the model without pretreatment are 1.6489, 1.0661, and 0.9942. After pretreatment, the SG is better than others, with MSE and MAE decreasing to 1.4727, 1.0318 and R2score improving to 0.9944. Using the optimal model, the predicted COD for three samples are 10.87 mg/L, 14.88 mg/L, and 19.29 mg/L. To address the problem of the small dataset, using Generative Adversarial Networks for data augmentation, three datasets are obtained for Support Vector Machine (SVM) modeling. The results indicate that, compared to the original dataset, the SVM's MSE and MAE have decreased, while its accuracy has improved by 2.88%, 11.53%, and 11.53%, and the R2score has improved by 18.07%, 17.40%, and 18.74%.
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Affiliation(s)
- Qirong Lu
- College of Information Science and Engineering, Guilin University of Technology, Guilin, China
- Guangxi Key Laboratory of Embedded Technology and Intelligent System, Guilin University of Technology, Guilin, China
| | - Jian Zou
- College of Information Science and Engineering, Guilin University of Technology, Guilin, China
- Guangxi Key Laboratory of Embedded Technology and Intelligent System, Guilin University of Technology, Guilin, China
| | - Yingya Ye
- College of Information Science and Engineering, Guilin University of Technology, Guilin, China
- Guangxi Key Laboratory of Embedded Technology and Intelligent System, Guilin University of Technology, Guilin, China
| | - Zexin Wang
- College of Information Science and Engineering, Guilin University of Technology, Guilin, China
- Guangxi Key Laboratory of Embedded Technology and Intelligent System, Guilin University of Technology, Guilin, China
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Jonasson H, Fredriksson I, Bergstrand S, Östgren CJ, Larsson M, Strömberg T. Absorption and reduced scattering coefficients in epidermis and dermis from a Swedish cohort study. JOURNAL OF BIOMEDICAL OPTICS 2023; 28:115001. [PMID: 38078153 PMCID: PMC10704088 DOI: 10.1117/1.jbo.28.11.115001] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 07/10/2023] [Revised: 09/25/2023] [Accepted: 10/30/2023] [Indexed: 12/18/2023]
Abstract
Significance Knowledge of optical properties is important to accurately model light propagation in tissue, but in vivo reference data are sparse. Aim The aim of our study was to present in vivo skin optical properties from a large Swedish cohort including 3809 subjects using a three-layered skin model and spatially resolved diffuse reflectance spectroscopy (Periflux PF6000 EPOS). Approach Diffuse reflectance spectra (475 to 850 nm) at 0.4 and 1.2 mm source-detector separations were analyzed using an inverse Monte Carlo method. The model had one epidermis layer with variable thicknesses and melanin-related absorptions and two dermis layers with varying hemoglobin concentrations and equal oxygen saturations. The reduced scattering coefficient was equal across all layers. Results Median absorption coefficients (mm - 1 ) in the upper dermis ranged from 0.094 at 475 nm to 0.0048 at 850 nm and similarly in the lower dermis from 0.059 to 0.0035. The reduced scattering coefficient (mm - 1 ) ranged from 3.22 to 1.20, and the sampling depth (mm) ranged from 0.23 to 0.38 (0.4 mm separation) and from 0.49 to 0.68 (1.2 mm separation). There were differences in optical properties across sex, age groups, and BMI categories. Conclusions Reference material for skin optical properties is presented.
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Affiliation(s)
- Hanna Jonasson
- Linköping University, Department of Biomedical Engineering, Linköping, Sweden
| | - Ingemar Fredriksson
- Linköping University, Department of Biomedical Engineering, Linköping, Sweden
- Perimed AB, Järfälla, Stockholm, Sweden
| | - Sara Bergstrand
- Linköping University, Department of Health, Medicine, and Caring Sciences, Linköping, Sweden
| | - Carl Johan Östgren
- Linköping University, Department of Health, Medicine, and Caring Sciences, Linköping, Sweden
- Linköping University, Centre of Medical Image Science and Visualization Linköping, Sweden
| | - Marcus Larsson
- Linköping University, Department of Biomedical Engineering, Linköping, Sweden
| | - Tomas Strömberg
- Linköping University, Department of Biomedical Engineering, Linköping, Sweden
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Tomanič T, Rogelj L, Milanič M. Robustness of diffuse reflectance spectra analysis by inverse adding doubling algorithm. BIOMEDICAL OPTICS EXPRESS 2022; 13:921-949. [PMID: 35284194 PMCID: PMC8884198 DOI: 10.1364/boe.443880] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Received: 09/21/2021] [Revised: 11/12/2021] [Accepted: 12/14/2021] [Indexed: 06/14/2023]
Abstract
Analysing diffuse reflectance spectra to extract properties of biological tissue requires modelling of light transport within the tissue, considering its absorption, scattering, and geometrical properties. Due to the layered skin structure, skin tissue models are often divided into multiple layers with their associated optical properties. Typically, in the analysis, some model parameters defining these properties are fixed to values reported in the literature to speed up the fitting process and improve its performance. In the absence of consensus, various studies use different approaches in fixing the model parameters. This study aims to assess the effect of fixing various model parameters in the skin spectra fitting process on the accuracy and robustness of a GPU-accelerated two-layer inverse adding-doubling (IAD) algorithm. Specifically, the performance of the IAD method is determined for noiseless simulated skin spectra, simulated spectra with different levels of noise applied, and in-vivo measured reflectance spectra from hyperspectral images of human hands recorded before, during, and after the arterial occlusion. Our results suggest that fixing multiple parameters to a priori known values generally improves the robustness and accuracy of the IAD algorithm for simulated spectra. However, for in-vivo measured spectra, these values are unknown in advance and fixing optical parameters to incorrect values significantly deteriorates the overall performance. Therefore, we propose a method to improve the fitting performance by pre-estimating model parameters. Our findings could be considered in all future research involving the analysis of diffuse reflectance spectra to extract optical properties of skin tissue.
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Affiliation(s)
- Tadej Tomanič
- Faculty of Mathematics and Physics, University of Ljubljana, Jadranska ulica 19, 1000 Ljubljana, Slovenia
| | - Luka Rogelj
- Faculty of Mathematics and Physics, University of Ljubljana, Jadranska ulica 19, 1000 Ljubljana, Slovenia
| | - Matija Milanič
- Faculty of Mathematics and Physics, University of Ljubljana, Jadranska ulica 19, 1000 Ljubljana, Slovenia
- Jozef Stefan Institute, Jamova cesta 39, 1000 Ljubljana, Slovenia
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Geldof F, Dashtbozorg B, Hendriks BHW, Sterenborg HJCM, Ruers TJM. Layer thickness prediction and tissue classification in two-layered tissue structures using diffuse reflectance spectroscopy. Sci Rep 2022; 12:1698. [PMID: 35105926 PMCID: PMC8807816 DOI: 10.1038/s41598-022-05751-5] [Citation(s) in RCA: 8] [Impact Index Per Article: 2.7] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/01/2021] [Accepted: 01/12/2022] [Indexed: 11/26/2022] Open
Abstract
During oncological surgery, it can be challenging to identify the tumor and establish adequate resection margins. This study proposes a new two-layer approach in which diffuse reflectance spectroscopy (DRS) is used to predict the top layer thickness and classify the layers in two-layered phantom and animal tissue. Using wavelet-based and peak-based DRS spectral features, the proposed method could predict the top layer thickness with an accuracy of up to 0.35 mm. In addition, the tissue types of the first and second layers were classified with an accuracy of 0.95 and 0.99. Distinguishing multiple tissue layers during spectral analyses results in a better understanding of more complex tissue structures encountered in surgical practice.
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Affiliation(s)
- Freija Geldof
- Department of Surgery, Netherlands Cancer Institute, 1066 CX, Amsterdam, The Netherlands.
| | - Behdad Dashtbozorg
- Department of Surgery, Netherlands Cancer Institute, 1066 CX, Amsterdam, The Netherlands
| | - Benno H W Hendriks
- Department of IGT and US Devices & Systems, Philips Research Laboratories, 5656 AE, Eindhoven, The Netherlands
- Department of BioMechanical Engineering, 3mE, Delft University of Technology, 2628 CD, Delft, The Netherlands
| | - Henricus J C M Sterenborg
- Department of Surgery, Netherlands Cancer Institute, 1066 CX, Amsterdam, The Netherlands
- Department of Biomedical Engineering and Physics, Amsterdam University Medical Center, 1105 AZ, Amsterdam, The Netherlands
| | - Theo J M Ruers
- Department of Surgery, Netherlands Cancer Institute, 1066 CX, Amsterdam, The Netherlands
- Faculty of Science and Technology, University of Twente, 7522 NB, Enschede, The Netherlands
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