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Ren M, Liu D, Qin F, Chen X, Ma W, Tian R, Weng T, Wang D, Astruc D, Liang L. Single-molecule resolution of macromolecules with nanopore devices. Adv Colloid Interface Sci 2025; 338:103417. [PMID: 39889505 DOI: 10.1016/j.cis.2025.103417] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/10/2024] [Accepted: 01/25/2025] [Indexed: 02/03/2025]
Abstract
Nanopore-based electrical detection technology holds single-molecule resolution and combines the advantages of high sensitivity, high throughput, rapid analysis, and label-free detection. It is widely applied in the determination of organic and biological macromolecules, small molecules, and nanomaterials, as well as in nucleic acid and protein sequencing. There are a wide variety of organic polymers and biopolymers, and their chemical structures, and conformation in solution directly affect their ensemble properties. Currently, there is limited approach available for the analysis of single-molecule conformation and self-assembled topologies of polymers, dendrimers and biopolymers. Nanopore single-molecule platform offers unique advantages over other sensing technologies, particularly in molecular size differentiation of macromolecules and complex conformation analysis. In this review, the classification of nanopore devices, including solid-state nanopores (SSNs), biological nanopores, and hybrid nanopores is introduced. The recent developments and applications of nanopore devices are summarized, with a focus on the applications of nanopore platform in the resolution of the structures of synthetic polymer, including dendritic, star-shaped, block copolymers, as well as biopolymers, including polysaccharides, nucleic acids and proteins. The future prospects of nanopore sensing technique are ultimately discussed.
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Affiliation(s)
- Meili Ren
- Chongqing Institute of Green and Intelligent Technology, Chinese Academy of Sciences & Chongqing School, University of Chinese Academy of Science, Chongqing 400714, PR China; Chongqing Jiaotong University, Chongqing 400014, PR China
| | - Daixin Liu
- Chongqing Institute of Green and Intelligent Technology, Chinese Academy of Sciences & Chongqing School, University of Chinese Academy of Science, Chongqing 400714, PR China
| | - Fupeng Qin
- Chongqing Institute of Green and Intelligent Technology, Chinese Academy of Sciences & Chongqing School, University of Chinese Academy of Science, Chongqing 400714, PR China
| | - Xun Chen
- Chongqing Institute of Green and Intelligent Technology, Chinese Academy of Sciences & Chongqing School, University of Chinese Academy of Science, Chongqing 400714, PR China
| | - Wenhao Ma
- Chongqing University, Chongqing 400044, China
| | - Rong Tian
- Chongqing Institute of Green and Intelligent Technology, Chinese Academy of Sciences & Chongqing School, University of Chinese Academy of Science, Chongqing 400714, PR China
| | - Ting Weng
- Chongqing Institute of Green and Intelligent Technology, Chinese Academy of Sciences & Chongqing School, University of Chinese Academy of Science, Chongqing 400714, PR China
| | - Deqang Wang
- Chongqing Institute of Green and Intelligent Technology, Chinese Academy of Sciences & Chongqing School, University of Chinese Academy of Science, Chongqing 400714, PR China
| | - Didier Astruc
- University of Bordeaux, ISM UMR CNRS 5255, 33405 Talence Cedex, France.
| | - Liyuan Liang
- Chongqing Institute of Green and Intelligent Technology, Chinese Academy of Sciences & Chongqing School, University of Chinese Academy of Science, Chongqing 400714, PR China.
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Kardasis P, Tzourtzouklis I, Nega AD, Sakellariou G, Steinhart M, Floudas G. Topology sorting: Separating linear/star polymer blend components by imbibition in nanopores. J Chem Phys 2024; 160:044912. [PMID: 38294315 DOI: 10.1063/5.0189661] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/30/2023] [Accepted: 01/07/2024] [Indexed: 02/01/2024] Open
Abstract
We report the imbibition and adsorption kinetics of a series of symmetric linear/star cis-1,4-polyisoprene blends within the long channels of self-ordered nanoporous anodic aluminum oxide (abbreviated: AAO). Using in situ nanodielectric spectroscopy, we followed the evolution of the longest chain modes in the blends with a judicious selection of molar masses for the constituent components. We demonstrated differences in the imbibition kinetics of linear and star components based on the relative viscosities (e.g., polymers with lower zero-shear viscosity penetrated first the nanopores). Following the complete imbibition of the pores, the adsorption time, τads, of each component was evaluated from the reduction in the dielectric strength of the respective chain modes. In the majority of blends, both components exhibited slower adsorption kinetics with respect to the homopolymers. The only exception was the case of entangled stars mixed with shorter linear chains, the latter acting as a diluent for the star component. This gives rise to what is known as topology sorting, e.g., the separation of linear/star blend components in the absence of solvent. Moreover, a simple relation (τads ∼ 10 × tpeak; tpeak is the time needed for the complete filling of pores) was found for linear polymers and stars. This suggested that the characteristic timescale of imbibition (tpeak) governs the adsorption process of polymers. It further implied the possibility of predicting the adsorption times of high molar mass polymers of various architectures by the shorter imbibition times.
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Affiliation(s)
| | | | - Alkmini D Nega
- Department of Chemistry, National and Kapodistrian University of Athens, 15771 Athens, Greece
| | - Georgios Sakellariou
- Department of Chemistry, National and Kapodistrian University of Athens, 15771 Athens, Greece
| | - Martin Steinhart
- Institut für Chemie neuer Materialien, Universität Osnabrück, D-49069 Osnabrück, Germany
| | - George Floudas
- Department of Physics, University of Ioannina, 45110 Ioannina, Greece
- University Research Center of Ioannina (URCI) - Institute of Materials Science and Computing, 45110 Ioannina, Greece
- Max Planck Institute for Polymer Research, 55128 Mainz, Germany
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Peng B, Yang Z, Yang L, Chen J, Liu L, Wang D. Reducing the Solvent Quality Gives Rise to the Outward Migration of a Star Polymer in Poiseuille Flow. Macromolecules 2022. [DOI: 10.1021/acs.macromol.2c00031] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/30/2022]
Affiliation(s)
- Bo Peng
- State Key Laboratory of Polymer Physics and Chemistry, Changchun Institute of Applied Chemistry, Chinese Academy of Sciences, Changchun, Jilin 130022, P. R. China
- University of Science and Technology of China, Hefei, Anhui 230026, P. R. China
| | - Zhenyue Yang
- State Key Laboratory of Polymer Physics and Chemistry, Changchun Institute of Applied Chemistry, Chinese Academy of Sciences, Changchun, Jilin 130022, P. R. China
| | - Li Yang
- State Key Laboratory of Environment-friendly Energy Materials, School of Material Science and Engineering, Southwest University of Science and Technology, Mianyang 621010, P. R. China
| | - Jizhong Chen
- Guangdong University of Technology, Guangzhou, Guangdong 510006, P. R. China
| | - Lijun Liu
- State Key Laboratory of Polymer Physics and Chemistry, Changchun Institute of Applied Chemistry, Chinese Academy of Sciences, Changchun, Jilin 130022, P. R. China
| | - Dapeng Wang
- State Key Laboratory of Polymer Physics and Chemistry, Changchun Institute of Applied Chemistry, Chinese Academy of Sciences, Changchun, Jilin 130022, P. R. China
- University of Science and Technology of China, Hefei, Anhui 230026, P. R. China
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Yao S, Chen Y, Ling Y, Hu D, Xi Z, Zhao L. Analysis of Bubble Growth in Supercritical CO 2 Extrusion Foaming Polyethylene Terephthalate Process Based on Dynamic Flow Simulation. Polymers (Basel) 2021; 13:polym13162799. [PMID: 34451336 PMCID: PMC8401983 DOI: 10.3390/polym13162799] [Citation(s) in RCA: 4] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/21/2021] [Revised: 08/14/2021] [Accepted: 08/18/2021] [Indexed: 11/16/2022] Open
Abstract
Bubble growth in the polymer extrusion foaming process occurs under a dynamic melt flow. For non-Newtonian fluids, this work successfully coupled the dynamic melt flow simulation with the bubble growth model to realize bubble growth predictions in an extrusion flow. The initial thermophysical properties and dynamic rheological property distribution at the cross section of the die exit were calculated based on the finite element method. It was found that dynamic rheological properties provided a necessary solution for predicting bubble growth during the supercritical CO2 polyethylene terephthalate (PET) extrusion foaming process. The introduction of initial melt stress could effectively inhibit the rapid growth of bubbles and reduce the stable size of bubbles. However, the initial melt stress was ignored in previous work involving bubble growth predictions because it was not available. The simulation results based on the above theoretical model were consistent with the evolution trends of cell morphology and agreed well with the actual experimental results.
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Affiliation(s)
- Shun Yao
- Shanghai Key Laboratory of Multiphase Materials Chemical Engineering, East China University of Science and Technology, Shanghai 200237, China; (S.Y.); (Y.C.); (Y.L.); (D.H.); (Z.X.)
| | - Yichong Chen
- Shanghai Key Laboratory of Multiphase Materials Chemical Engineering, East China University of Science and Technology, Shanghai 200237, China; (S.Y.); (Y.C.); (Y.L.); (D.H.); (Z.X.)
| | - Yijie Ling
- Shanghai Key Laboratory of Multiphase Materials Chemical Engineering, East China University of Science and Technology, Shanghai 200237, China; (S.Y.); (Y.C.); (Y.L.); (D.H.); (Z.X.)
| | - Dongdong Hu
- Shanghai Key Laboratory of Multiphase Materials Chemical Engineering, East China University of Science and Technology, Shanghai 200237, China; (S.Y.); (Y.C.); (Y.L.); (D.H.); (Z.X.)
| | - Zhenhao Xi
- Shanghai Key Laboratory of Multiphase Materials Chemical Engineering, East China University of Science and Technology, Shanghai 200237, China; (S.Y.); (Y.C.); (Y.L.); (D.H.); (Z.X.)
| | - Ling Zhao
- Shanghai Key Laboratory of Multiphase Materials Chemical Engineering, East China University of Science and Technology, Shanghai 200237, China; (S.Y.); (Y.C.); (Y.L.); (D.H.); (Z.X.)
- School of Chemical Engineering and Technology, Xinjiang University, Urumqi 830046, China
- Correspondence:
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Driven Transport of Dilute Polymer Solutions through Porous Media Comprising Interconnected Cavities. COLLOIDS AND INTERFACES 2021. [DOI: 10.3390/colloids5020022] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 11/16/2022]
Abstract
Driven transport of dilute polymer solutions through porous media has been simulated using a recently proposed novel dissipative particle dynamics method satisfying the no-penetration and no-slip boundary conditions. The porous media is an array of overlapping spherical cavities arranged in a simple cubic lattice. Simulations were performed for linear, ring, and star polymers with 12 arms for two cases with the external force acting on (I) both polymer and solvent beads to model a pressure-driven flow; (II) polymer beads only, similar to electrophoresis. When the external force is in the direction of a principal axis, the extent of change in the polymers’ conformation and their alignment with the driving force is more significant for case I. These effects are most pronounced for linear chains, followed by rings and stars at the same molecular weight. Moreover, the polymer mean velocity is affected by its molecular weight and architecture as well as the direction and strength of the imposed force.
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Liu A, Yang Z, Liu L, Chen J, An L. Role of Functionality in Cross-Stream Migration, Structures, and Dynamics of Star Polymers in Poiseuille Flow. Macromolecules 2020. [DOI: 10.1021/acs.macromol.0c00699] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/30/2022]
Affiliation(s)
- Aiqing Liu
- College of Chemistry, Jilin University, Changchun 130012, People’s Republic of China
- State Key Laboratory of Polymer Physics and Chemistry, Changchun Institute of Applied Chemistry, Chinese Academy of Sciences, Changchun 130022, People’s Republic of China
| | - Zhenyue Yang
- State Key Laboratory of Polymer Physics and Chemistry, Changchun Institute of Applied Chemistry, Chinese Academy of Sciences, Changchun 130022, People’s Republic of China
| | - Lijun Liu
- State Key Laboratory of Polymer Physics and Chemistry, Changchun Institute of Applied Chemistry, Chinese Academy of Sciences, Changchun 130022, People’s Republic of China
| | - Jizhong Chen
- State Key Laboratory of Polymer Physics and Chemistry, Changchun Institute of Applied Chemistry, Chinese Academy of Sciences, Changchun 130022, People’s Republic of China
- University of Science and Technology of China, Hefei 230026, People’s Republic of China
| | - Lijia An
- State Key Laboratory of Polymer Physics and Chemistry, Changchun Institute of Applied Chemistry, Chinese Academy of Sciences, Changchun 130022, People’s Republic of China
- University of Science and Technology of China, Hefei 230026, People’s Republic of China
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Role of Hydrodynamic Interactions in the Deformation of Star Polymers in Poiseuille Flow. CHINESE JOURNAL OF POLYMER SCIENCE 2019. [DOI: 10.1007/s10118-020-2346-5] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 11/27/2022]
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Chandran S, Baschnagel J, Cangialosi D, Fukao K, Glynos E, Janssen LMC, Müller M, Muthukumar M, Steiner U, Xu J, Napolitano S, Reiter G. Processing Pathways Decide Polymer Properties at the Molecular Level. Macromolecules 2019. [DOI: 10.1021/acs.macromol.9b01195] [Citation(s) in RCA: 81] [Impact Index Per Article: 13.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/13/2022]
Affiliation(s)
| | - Jörg Baschnagel
- Institut Charles Sadron, Université de Strasbourg & CNRS, 23 rue du Loess, 67034 Cedex, Strasbourg, France
| | - Daniele Cangialosi
- Centro de Física de Materiales CFM (CSIC-UPV/EHU) and Materials Physics Center MPC, Paseo Manuel de Lardizabal 5, 20018 San Sebastián, Spain
- Donostia International Physics Center (DIPC), Paseo Manuel de Lardizabal 4, 20018 San Sebastin, Spain
| | - Koji Fukao
- Department of Physics, Ritsumeikan University, Kusatsu, Shiga 525-8577, Japan
| | - Emmanouil Glynos
- Institute of Electronic Structure and Laser, Foundation for Research and Technology-Hellas, P.O.
Box 1385, 711 10 Heraklion, Crete, Greece
| | - Liesbeth M. C. Janssen
- Theory of Polymers and Soft Matter, Department of Applied Physics, Eindhoven University of Technology, P.O. Box 513, 5600MB Eindhoven, The Netherlands
| | - Marcus Müller
- Institute for Theoretical Physics, Georg-August-Universität, Göttingen, Germany
| | - Murugappan Muthukumar
- Department of Polymer Science and Engineering, University of Massachusetts, Amherst, Massachusetts 01003, United States
| | - Ullrich Steiner
- Adolphe Merkle Institute, Chemin des Verdiers 4, 1700 Fribourg, Switzerland
| | - Jun Xu
- Advanced Materials Laboratory of Ministry of Education, Department of Chemical Engineering, Tsinghua University, Beijing 100084, China
| | - Simone Napolitano
- Laboratory of Polymer and Soft Matter Dynamics, Experimental Soft Matter and Thermal Physics, Faculté des Sciences, Université libre de Bruxelles (ULB), CP223, Boulevard du Triomphe, Bruxelles 1050, Belgium
| | - Günter Reiter
- Institute of Physics, University of Freiburg, Freiburg 79104, Germany
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Howard MP, Truskett TM, Nikoubashman A. Cross-stream migration of a Brownian droplet in a polymer solution under Poiseuille flow. SOFT MATTER 2019; 15:3168-3178. [PMID: 30883631 DOI: 10.1039/c8sm02552e] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/09/2023]
Abstract
The migration of a Brownian fluid droplet in a parallel-plate microchannel was investigated using dissipative particle dynamics computer simulations. In a Newtonian solvent, the droplet migrated toward the channel walls due to inertial effects at the studied flow conditions, in agreement with theoretical predictions and recent simulations. However, the droplet focused onto the channel centerline when polymer chains were added to the solvent. Focusing was typically enhanced for longer polymers and higher polymer concentrations with a nontrivial flow-rate dependence due to droplet and polymer deformability. Brownian motion caused the droplet position to fluctuate with a distribution that primarily depended on the balance between inertial lift forces pushing the droplet outward and elastic forces from the polymers driving it inward. The droplet shape was controlled by the local shear rate, and so its average shape depended on the droplet distribution.
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Affiliation(s)
- Michael P Howard
- McKetta Department of Chemical Engineering, University of Texas at Austin, Austin, Texas 78712, USA.
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