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El-Ghamry AM, El-Sherpiny MA, Alkharpotly AEA, Ghazi DA, Helmy AA, Siddiqui MH, Pessarakli M, Hossain MA, Elghareeb EM. The synergistic effects of organic composts and microelements co-application in enhancing potato productivity in saline soils. Heliyon 2024; 10:e32694. [PMID: 38988530 PMCID: PMC11233941 DOI: 10.1016/j.heliyon.2024.e32694] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/24/2024] [Revised: 06/06/2024] [Accepted: 06/06/2024] [Indexed: 07/12/2024] Open
Abstract
Soil salinity is a major threat hindering the optimum growth, yield, and nutritional value of potato. The application of organic composts and micronutrients can effectively ameliorate the salinity-deleterious effects on potato growth and productivity. Herein, the combined effect of banana and soybean composts (BCo and SCo) application alongside foliar supplementation of boron (B), selenium (Se), cobalt (Co), and titanium (Ti) were investigated for improving growth, physiology, and agronomical attributes of potato plants grown in saline alluvial soil. Salinity stress significantly reduced biomass accumulation, chlorophyll content, NPK concentrations, yield attributes, and tuber quality, while inducing malondialdehyde and antioxidant enzymes. Co-application of either BCo or SCo with trace elements markedly alleviated salinity-adverse effects on potato growth and productivity. These promotive effects were also associated with a significant reduction in malondialdehyde content and activities of peroxidase and superoxide dismutase enzymes. The co-application of BCo and B/Se was the most effective among other treatments. Principle component analysis and heatmap also highlighted the efficacy of the co-application of organic composts and micronutrients in improving the salinity tolerance of potato plants. In essence, the co-application of BCo with B and Se can be adopted as a promising strategy for enhancing the productivity of potato crops in salt-affected soils.
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Affiliation(s)
- Ayman M. El-Ghamry
- Soil Sciences Department, Faculty of Agriculture, Mansoura University, 35516, Egypt
| | - Mohamed A. El-Sherpiny
- Soil, Water and Environment Research Institute, Agriculture Research Center, El-Gama St., Giza, 12619, Egypt
| | - Abd-Elbaset A. Alkharpotly
- Horticulture Department, Faculty of Agriculture and Natural Resources, Aswan University, 81528, Egypt
- Horticulture Department, Faculty of desert and environmental agricultural, Matrouh University, 51511, Egypt
| | - Dina A. Ghazi
- Soil Sciences Department, Faculty of Agriculture, Mansoura University, 35516, Egypt
| | - Amal A. Helmy
- Soil Sciences Department, Faculty of Agriculture, Mansoura University, 35516, Egypt
| | - Manzer H. Siddiqui
- Department of Botany and Microbiology, College of Science, King Saud University, Riyadh 11451, Saudi Arabia
| | | | - Mohammad Anwar Hossain
- Department of Genetics and Plant Breeding, Bangladesh Agricultural University, Mymensingh, 2202, Bangladesh
| | - Eman M. Elghareeb
- Botany Department, Faculty of Science, Mansoura University, Mansoura, 35516, Egypt
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Agbasi JC, Egbueri JC. Prediction of potentially toxic elements in water resources using MLP-NN, RBF-NN, and ANFIS: a comprehensive review. ENVIRONMENTAL SCIENCE AND POLLUTION RESEARCH INTERNATIONAL 2024; 31:30370-30398. [PMID: 38641692 DOI: 10.1007/s11356-024-33350-6] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 03/12/2024] [Accepted: 04/12/2024] [Indexed: 04/21/2024]
Abstract
Water resources are constantly threatened by pollution of potentially toxic elements (PTEs). In efforts to monitor and mitigate PTEs pollution in water resources, machine learning (ML) algorithms have been utilized to predict them. However, review studies have not paid attention to the suitability of input variables utilized for PTE prediction. Therefore, the present review analyzed studies that employed three ML algorithms: MLP-NN (multilayer perceptron neural network), RBF-NN (radial basis function neural network), and ANFIS (adaptive neuro-fuzzy inference system) to predict PTEs in water. A total of 139 models were analyzed to ascertain the input variables utilized, the suitability of the input variables, the trends of the ML model applications, and the comparison of their performances. The present study identified seven groups of input variables commonly used to predict PTEs in water. Group 1 comprised of physical parameters (P), chemical parameters (C), and metals (M). Group 2 contains only P and C; Group 3 contains only P and M; Group 4 contains only C and M; Group 5 contains only P; Group 6 contains only C; and Group 7 contains only M. Studies that employed the three algorithms proved that Groups 1, 2, 3, 5, and 7 parameters are suitable input variables for forecasting PTEs in water. The parameters of Groups 4 and 6 also proved to be suitable for the MLP-NN algorithm. However, their suitability with respect to the RBF-NN and ANFIS algorithms could not be ascertained. The most commonly predicted PTEs using the MLP-NN algorithm were Fe, Zn, and As. For the RBF-NN algorithm, they were NO3, Zn, and Pb, and for the ANFIS, they were NO3, Fe, and Mn. Based on correlation and determination coefficients (R, R2), the overall order of performance of the three ML algorithms was ANFIS > RBF-NN > MLP-NN, even though MLP-NN was the most commonly used algorithm.
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Affiliation(s)
- Johnson C Agbasi
- Department of Geology, Chukwuemeka Odumegwu Ojukwu University, Uli, Nigeria
| | - Johnbosco C Egbueri
- Department of Geology, Chukwuemeka Odumegwu Ojukwu University, Uli, Nigeria.
- Research Management Office (RMO), Chukwuemeka Odumegwu Ojukwu University, Anambra State, Nigeria.
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Sompark C, Damrianant S, Sakkayawong N. Phytotoxicity and genotoxicity study of reactive red 141 dye on mung bean (Vigna radiata (L.) Wilczek) seedlings. Mol Biol Rep 2024; 51:51. [PMID: 38165511 DOI: 10.1007/s11033-023-08917-0] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/12/2023] [Accepted: 11/17/2023] [Indexed: 01/03/2024]
Abstract
BACKGROUND Reactive Red (RR) 141 dye is widely used in various industrial applications, but its environmental impact remains a growing concern. In this study, the phytotoxic and genotoxic effects of RR 141 dye on mung bean seedlings (Vigna radiata (L.) Wilczek) were investigated, serving as a model for potential harm to plant systems. METHODS AND RESULTS Short-term (14 days) and long-term (60 days) experiments in paddy soil pot culture exposed mung bean seedlings to RR 141 dye. The dye delayed germination and hindered growth, significantly reducing germination percentage and seedling vigor index (SVI) at concentrations of 50 and 100 ml/L. In short-term exposure, plumule and radical lengths dose-dependently decreased, while long-term exposure affected plant length and grain weight, leaving pod-related parameters unaffected. To evaluate genotoxicity, high annealing temperature-random amplified polymorphic DNA (HAT-RAPD) analysis was employed with five RAPD primers having 58-75% GC content. It detected polymorphic band patterns, generating 116 bands (433 to 2857 bp) in plant leaves exposed to the dye. Polymorphisms indicated the appearance/disappearance of DNA bands in both concentrations, with decreased genomic template stability (GTS) values suggesting DNA damage and mutation. CONCLUSION These findings demonstrate that RR 141 dye has a significant impact on genomic template stability (GTS) and exhibits phytotoxic and genotoxic responses in mung bean seedlings. This research underscores the potential of RR 141 dye to act as a harmful agent within plant model systems, highlighting the need for further assessment of its environmental implications.
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Affiliation(s)
- Chalermwoot Sompark
- Postharvest and Processing Research and Development Division, Department of Agriculture, Ladyao, Chatuchack, Bangkok, 10900, Thailand
| | - Somchit Damrianant
- Department of Biotechnology, Faculty of Science and Technology, Thammasat University, Rangsit Centre, Khlong Nueng, Klong Luang, Pathum Thani, 12120, Thailand
| | - Niramol Sakkayawong
- Department of Biotechnology, Faculty of Science and Technology, Thammasat University, Rangsit Centre, Khlong Nueng, Klong Luang, Pathum Thani, 12120, Thailand.
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Nykiel M, Gietler M, Fidler J, Prabucka B, Rybarczyk-Płońska A, Graska J, Boguszewska-Mańkowska D, Muszyńska E, Morkunas I, Labudda M. Signal Transduction in Cereal Plants Struggling with Environmental Stresses: From Perception to Response. PLANTS (BASEL, SWITZERLAND) 2022; 11:1009. [PMID: 35448737 PMCID: PMC9026486 DOI: 10.3390/plants11081009] [Citation(s) in RCA: 16] [Impact Index Per Article: 5.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 03/16/2022] [Revised: 04/04/2022] [Accepted: 04/06/2022] [Indexed: 05/13/2023]
Abstract
Cereal plants under abiotic or biotic stressors to survive unfavourable conditions and continue growth and development, rapidly and precisely identify external stimuli and activate complex molecular, biochemical, and physiological responses. To elicit a response to the stress factors, interactions between reactive oxygen and nitrogen species, calcium ions, mitogen-activated protein kinases, calcium-dependent protein kinases, calcineurin B-like interacting protein kinase, phytohormones and transcription factors occur. The integration of all these elements enables the change of gene expression, and the release of the antioxidant defence and protein repair systems. There are still numerous gaps in knowledge on these subjects in the literature caused by the multitude of signalling cascade components, simultaneous activation of multiple pathways and the intersection of their individual elements in response to both single and multiple stresses. Here, signal transduction pathways in cereal plants under drought, salinity, heavy metal stress, pathogen, and pest attack, as well as the crosstalk between the reactions during double stress responses are discussed. This article is a summary of the latest discoveries on signal transduction pathways and it integrates the available information to better outline the whole research problem for future research challenges as well as for the creative breeding of stress-tolerant cultivars of cereals.
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Affiliation(s)
- Małgorzata Nykiel
- Department of Biochemistry and Microbiology, Institute of Biology, Warsaw University of Life Sciences-SGGW, 02-776 Warsaw, Poland; (M.G.); (J.F.); (B.P.); (A.R.-P.); (J.G.); (M.L.)
| | - Marta Gietler
- Department of Biochemistry and Microbiology, Institute of Biology, Warsaw University of Life Sciences-SGGW, 02-776 Warsaw, Poland; (M.G.); (J.F.); (B.P.); (A.R.-P.); (J.G.); (M.L.)
| | - Justyna Fidler
- Department of Biochemistry and Microbiology, Institute of Biology, Warsaw University of Life Sciences-SGGW, 02-776 Warsaw, Poland; (M.G.); (J.F.); (B.P.); (A.R.-P.); (J.G.); (M.L.)
| | - Beata Prabucka
- Department of Biochemistry and Microbiology, Institute of Biology, Warsaw University of Life Sciences-SGGW, 02-776 Warsaw, Poland; (M.G.); (J.F.); (B.P.); (A.R.-P.); (J.G.); (M.L.)
| | - Anna Rybarczyk-Płońska
- Department of Biochemistry and Microbiology, Institute of Biology, Warsaw University of Life Sciences-SGGW, 02-776 Warsaw, Poland; (M.G.); (J.F.); (B.P.); (A.R.-P.); (J.G.); (M.L.)
| | - Jakub Graska
- Department of Biochemistry and Microbiology, Institute of Biology, Warsaw University of Life Sciences-SGGW, 02-776 Warsaw, Poland; (M.G.); (J.F.); (B.P.); (A.R.-P.); (J.G.); (M.L.)
| | | | - Ewa Muszyńska
- Department of Botany, Institute of Biology, Warsaw University of Life Sciences-SGGW, 02-776 Warsaw, Poland;
| | - Iwona Morkunas
- Department of Plant Physiology, Poznań University of Life Sciences, Wołyńska 35, 60-637 Poznań, Poland;
| | - Mateusz Labudda
- Department of Biochemistry and Microbiology, Institute of Biology, Warsaw University of Life Sciences-SGGW, 02-776 Warsaw, Poland; (M.G.); (J.F.); (B.P.); (A.R.-P.); (J.G.); (M.L.)
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Mosa A, Selim EMM, El-Kadi SM, Khedr AA, Elnaggar AA, Hefny WA, Abdelhamid AS, El Kenawy AM, El-Naggar A, Wang H, Shaheen SM. Ecotoxicological assessment of toxic elements contamination in mangrove ecosystem along the Red Sea coast, Egypt. MARINE POLLUTION BULLETIN 2022; 176:113446. [PMID: 35245874 DOI: 10.1016/j.marpolbul.2022.113446] [Citation(s) in RCA: 8] [Impact Index Per Article: 2.7] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 08/06/2021] [Revised: 01/29/2022] [Accepted: 02/07/2022] [Indexed: 06/14/2023]
Abstract
Identifying biochemical aspects of the potentially toxic elements (PTEs) is of particular concern in mangrove ecosystems, Avicennia marina (Forssk.) Vierh., due to their importance as natural buffers in coastal areas. Nonetheless, the microbial community dynamics and potential scavenging responses of mangrove ecosystems to the phytotoxicity of PTEs remain questionable. This study assesses the ecological risk benchmarks of some PTEs, including aluminum (Al), boron (B), barium (Ba), cadmium (Cd), cobalt (Co), chromium (Cr), copper (Cu), iron (Fe), mercury (Hg), manganese (Mn), nickel (Ni), lead (Pb), and zinc (Zn), and their microbial responses in the bottom sediments of mangrove ecosystems along Egypt's Red Sea coast. In particular, we assessed the role of microbial metabolites in biochemical cycling of nutrients and scavenging against phytotoxicity hazards. We quantified a spectrum of ecological risk assessment indices, which suggested elevated levels of PTEs in sediment, particularly Cr, Hg, and Pb. Canonical correspondence analysis and generalized linear mixed effects models indicate that the spatial biodiversity of microbial taxa is impacted significantly by the physicochemical characteristics of sediments and concentrations of PTEs. Results demonstrate that the microbial communities and their metabolites exert a significant influence on organic matter (OM) decomposition and the biochemical cycling of phytoavailable nutrients including nitrogen (N), phosphorus (P), and potassium (K). Spatially, nitrogenase activities were higher (411.5 μmoL h-1 mL-1) in the southern sites of the Red Sea coast relative to the northern locations (93.8 μmoL h-1 mL-1). In contrast, higher concentrations of phytohormones, including indole-3-acetic acid (IAA) (61.5 mg mL-1) and gibberellins (534.2 mg mL-1), were more evident in northern sites. Siderophores correlated positively with Fe concentration in sediments and averaged 307.4 mg mL-1. Overall, these findings provide insights into the biochemical signals of PTEs contamination in hostile environments, contributing to a better understanding of the future prospects of PTEs bioremediation in contaminated coastal environments.
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Affiliation(s)
- Ahmed Mosa
- Soils Department, Faculty of Agriculture, Mansoura University, 35516 Mansoura, Egypt.
| | | | - Sherif M El-Kadi
- Agricultural Microbiology Department, Faculty of Agriculture, Damietta University, 34517, Egypt
| | - Abdelhamid A Khedr
- Botany and Microbiology Department, Faculty of Science, Damietta University, 34517, Egypt
| | - Abdelhamid A Elnaggar
- Soils Department, Faculty of Agriculture, Mansoura University, 35516 Mansoura, Egypt
| | - Wael A Hefny
- Nature Conservation Sector, Egyptian Environmental Affairs Agency (EEAA), Egypt
| | - Ahmad S Abdelhamid
- Soils Department, Faculty of Agriculture, Damietta University, 34517, Egypt
| | | | - Ali El-Naggar
- Department of Soil Sciences, Faculty of Agriculture, Ain Shams University, Cairo 11241, Egypt; State Key Laboratory of Subtropical Silviculture, Zhejiang A & F University, Hangzhou 311300, PR China; Department of Renewable Resources, University of Alberta, 442 Earth Sciences Building, Edmonton, Alberta T6G 2E3, Canada
| | - Hongyu Wang
- School of Civil Engineering, Wuhan University, Wuhan 430072, China
| | - Sabry M Shaheen
- University of Wuppertal, Laboratory of Soil- and Groundwater-Management, Pauluskirchstraße 7, 42285 Wuppertal, Germany.
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Ibraheem F, Al-Zahrani A, Mosa A. Physiological Adaptation of Three Wild Halophytic Suaeda Species: Salt Tolerance Strategies and Metal Accumulation Capacity. PLANTS (BASEL, SWITZERLAND) 2022; 11:plants11040537. [PMID: 35214869 PMCID: PMC8877964 DOI: 10.3390/plants11040537] [Citation(s) in RCA: 13] [Impact Index Per Article: 4.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 01/04/2022] [Revised: 02/14/2022] [Accepted: 02/15/2022] [Indexed: 05/06/2023]
Abstract
Understanding salt tolerance mechanisms in halophytes is critical for improving the world's agriculture under climate change scenarios. Herein, the physiological and metabolic responses of Suaeda monoica, Suaeda vermiculata, and Suaeda schimperi against abiotic stress in their natural saline environment on the east coast of the Red Sea were investigated. The tested species are exposed to different levels of salinity along with elemental disorders, including deficiency in essential nutrients (N&P in particular) and/or elevated levels of potentially toxic elements. The tested species employed common and species-specific tolerance mechanisms that are driven by the level of salinity and the genetic constitution of Suaeda species. These mechanisms include: (i) utilization of inorganic elements as cheap osmotica (Na+ in particular), (ii) lowering C/N ratio (S. monoica and S. schimperi) that benefits growth priority, (iii) efficient utilization of low soil N (S. vermiculata) that ensures survival priority, (v) biosynthesis of betacyanin (S. schimperi and S. vermiculata) and (vi) downregulation of overall metabolism (S. vermiculata) to avoid oxidative stress. Based on their cellular metal accumulation, S. monoica is an efficient phytoextractor of Cr, Co, Cu, Ni, and Zn, whereas S. vermiculata is a hyper-accumulator of Hg and Pb. S. schimperi is an effective phytoextractor of Fe, Hg, and Cr. These results highlight the significance of Suaeda species as a promising model halophyte and as phytoremediators of their hostile environments.
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Affiliation(s)
- Farag Ibraheem
- Biology and Chemistry Department, Al Qunfodah University College, Umm Al-Qura University, Al Qunfodah 21912, Saudi Arabia;
- Botany Department, Faculty of Science, Mansoura University, Mansoura 35516, Egypt
- Correspondence: (F.I.); (A.M.)
| | - Ateeq Al-Zahrani
- Biology and Chemistry Department, Al Qunfodah University College, Umm Al-Qura University, Al Qunfodah 21912, Saudi Arabia;
| | - Ahmed Mosa
- Soils Department, Faculty of Agriculture, Mansoura University, Mansoura 35516, Egypt
- Correspondence: (F.I.); (A.M.)
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Okba SK, Mazrou Y, Elmenofy HM, Ezzat A, Salama AM. New Insights of Potassium Sources Impacts as Foliar Application on 'Canino' Apricot Fruit Yield, Fruit Anatomy, Quality and Storability. PLANTS 2021; 10:plants10061163. [PMID: 34201044 PMCID: PMC8229475 DOI: 10.3390/plants10061163] [Citation(s) in RCA: 7] [Impact Index Per Article: 1.8] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 04/12/2021] [Revised: 05/21/2021] [Accepted: 05/28/2021] [Indexed: 12/29/2022]
Abstract
This is the first report to study the impacts of potassium sources on apricot fruit yield, quality and storability as a preharvest foliar application. Five sources of potassium (K-humate, K-sulphate, K-nitrate, K-silicate and K-citrate), plus water as a control treatment, were applied individually at 0.2% three times on ‘Canino’ apricot over the 2019 and 2020 seasons. The results showed that all potassium salts, applied foliarly, have potential to improve yield, fruit color, and some fruit physical attributes, such as: weight, size and firmness, as well as a reduced lipid peroxidation, accompanied by a low fruit malondialdehyde content reflected in a high tolerance during storage. The K-nitrate treatment was more effective in the improvement of fruit yield, preharvest quality parameters and keeping fruit postharvest quality characteristics from sharp decline during cold storage. Concerning fruit anatomy, K-nitrate and K-citrate showed thicker cuticle and epidermal parenchyma cell diameters, while the K-silicate induced the highest cell wall thickness. K-nitrate was the most economical, and could be recommended for apricot growers in the Nubaria region of Egypt.
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Affiliation(s)
- Sameh K. Okba
- Deciduous Fruit Department, Horticulture Research Institute, Agricultural Research Center, Giza 12619, Egypt;
| | - Yasser Mazrou
- Community College, King Khalid University, Abha 62217, Saudi Arabia;
- Department of Agriculture Economic, Faculty of Agriculture, Tanta University, Tanta 31527, Egypt
| | - Hayam M. Elmenofy
- Fruit Handling Department, Horticulture Research Institute, Agricultural Research Center, Giza 12619, Egypt;
| | - Ahmed Ezzat
- Department of Horticulture, Faculty of Agriculture, Kafrelshaikh University, Kafr El-Shaikh 33516, Egypt;
| | - Abdel-Moety Salama
- Department of Horticulture, Faculty of Agriculture, Kafrelshaikh University, Kafr El-Shaikh 33516, Egypt;
- Physiology and Breeding of Horticultural Crops Lab (PBHCL), Faculty of Agriculture, Kafrelsheikh University, Kafr El-Sheikh 33516, Egypt
- Correspondence:
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Assessing spatial distribution, potential ecological and human health risks of soil heavy metals contamination around a Trailer Park in Nigeria. SCIENTIFIC AFRICAN 2020. [DOI: 10.1016/j.sciaf.2020.e00650] [Citation(s) in RCA: 10] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 02/01/2023] Open
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