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Braga HSN, Vieira MVSA, Silva TAF, Protázio AS, Protázio AS. Acoustic partitioning explains the coexistence between two Physalaemus species (Anura, Leptodactylidae) in the Atlantic Forest in Eastern Bahia State, Brazil. AN ACAD BRAS CIENC 2023; 95:e20211348. [PMID: 37075350 DOI: 10.1590/0001-3765202320211348] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/06/2021] [Accepted: 04/28/2022] [Indexed: 04/21/2023] Open
Abstract
In this study we investigate the niche interaction between the frogs Physalameus cuvieri and Physalaemus kroyeri that occur in syntopy in water bodies of the Atlantic Forest located in the eastern Bahia State, Brazil. We investigated the niche width and overlap in the calling activity time, microhabitat use, diet composition, advertisement call, and body size. Both species preferred the same substrate and calling substrate categories, and showed low niche width values and high spatial niche overlap values. The pseudocommunity analysis revealed the absence of competition in space use. Ants and termites were the most important items in the diet of both species with the pseudocommunity analysis indicating an absence of competition in the diet. The two species demonstrate a greater similarity in body proportions and a high overlap in the calling activity time. However, they showed divergence in acoustic parameters, especially in the dominant frequency and call duration. Our results reinforce the role of advertisement call as a relevant attribute for anuran coexistence and highlight the importance of analyzing the various axes of the multidimensional niche for the most reliable description of the existence and magnitude of niche partitioning.
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Affiliation(s)
- Hugo S N Braga
- Programa de Pós-Graduação em Zoologia, Universidade Estadual de Santa Cruz, Rodovia Jorge Amado, Km 16, Salobrinho, 45662-900 Ilhéus, BA, Brazil
| | - Marcos V S A Vieira
- Programa de Pós-Graduação em Zoologia, Universidade Estadual de Santa Cruz, Rodovia Jorge Amado, Km 16, Salobrinho, 45662-900 Ilhéus, BA, Brazil
| | - Tiago A F Silva
- Universidade Federal do Recôncavo da Bahia, Centro de Ciências Agrárias, Ambientais e Biológicas, Rua Rui Barbosa, 710, 44380-000 Cruz das Almas, BA, Brazil
| | - Airan S Protázio
- Departamento de Ensino, Instituto Federal de Educação, Ciência e Tecnologia da Bahia, Rua Vital Brasil, 1394-1908, Pitanguinha, 43700-000 Simões Filho, BA, Brazil
| | - Arielson S Protázio
- Universidade Federal do Recôncavo da Bahia, Centro de Ciências Agrárias, Ambientais e Biológicas, Rua Rui Barbosa, 710, 44380-000 Cruz das Almas, BA, Brazil
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FERRO JUANM, TAFFAREL ALBERTO, TOMATIS CRISTIAN, BORTEIRO CLAUDIO, KOLENC FRANCISCO, GATTO KALEBP, LOURENÇO LUCIANAB, BALDO DIEGO. Cytogenetics of four foam-nesting frog species of the Physalaemus gracilis group (Anura, Leptodactylidae). AN ACAD BRAS CIENC 2022; 94:e20200092. [DOI: 10.1590/0001-3765202220200092] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/20/2020] [Accepted: 03/24/2020] [Indexed: 11/21/2022] Open
Affiliation(s)
| | | | | | | | | | - KALEB P. GATTO
- Universidade Estadual de Campinas, Brazil; Universidade Estadual Paulista, Brazil
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Gazoni T, Lyra ML, Ron SR, Strüssmann C, Baldo D, Narimatsu H, Pansonato A, Schneider RG, Giaretta AA, Haddad CF, Parise-Maltempi PP, Carvalho TR. Revisiting the systematics of the Leptodactylus melanonotus group (Anura: Leptodactylidae): Redescription of L. petersii and revalidation of its junior synonyms. ZOOL ANZ 2021. [DOI: 10.1016/j.jcz.2020.12.002] [Citation(s) in RCA: 6] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/12/2023]
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Nascimento J, Lima JD, Suárez P, Baldo D, Andrade GV, Pierson TW, Fitzpatrick BM, Haddad CFB, Recco-Pimentel SM, Lourenço LB. Extensive Cryptic Diversity Within the Physalaemus cuvieri- Physalaemus ephippifer Species Complex (Amphibia, Anura) Revealed by Cytogenetic, Mitochondrial, and Genomic Markers. Front Genet 2019; 10:719. [PMID: 31475033 PMCID: PMC6702337 DOI: 10.3389/fgene.2019.00719] [Citation(s) in RCA: 8] [Impact Index Per Article: 1.6] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/04/2018] [Accepted: 07/09/2019] [Indexed: 01/03/2023] Open
Abstract
Previous cytogenetic and phylogenetic analyses showed a high variability in the frog taxa Physalaemus cuvieri and Physalaemus ephippifer and suggested the presence of undescribed diversity in this species complex. Here, by 1) adding specimens from the Brazilian Amazon region, 2) employing sequence-based species delimitation approaches, and 3) including RADseq-style markers, we demonstrate that the diversity in the P. cuvieri-P. ephippifer species complex is even greater than previously suspected. Specimens from Viruá and Western Pará, located at the Guiana Amazonian area of endemism, were recovered as distinct from all previously identified lineages by the phylogenetic analyses based on mitochondrial DNA and RAD markers, a PCA from RAD data, and cytogenetic analysis. The sequence-based species delimitation analyses supported the recognition of one or two undescribed species among these Amazonian specimens and also supported the recognition of at least three other species in the P. cuvieri-P. ephippifer species complex. These new results reinforce the need for a comprehensive taxonomic revision.
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Affiliation(s)
- Juliana Nascimento
- Laboratório de Estudos Cromossômicos (LabEsC), Departamento de Biologia Estrutural e Funcional, Instituto de Biologia, Universidade Estadual de Campinas, São Paulo, Brazil
| | - Jucivaldo D. Lima
- Núcleo de Biodiversidade (NUBIO), Instituto de Pesquisas Científicas e Tecnológicas do Estado do Amapá, Zoologia, Campus da Fazendinha, Macapá, Brazil
| | - Pablo Suárez
- Instituto de Biología Subtropical (CONICET-UNaM), Puerto Iguazú, Argentina
| | - Diego Baldo
- Laboratorio de Genética Evolutiva, Instituto de Biología Subtropical (CONICET-UNaM), Facultad de Ciencias Exactas, Químicas y Naturales, Universidad Nacional de Misiones, Posadas, Argentina
| | - Gilda V. Andrade
- Departamento de Biologia, Centro de Ciências Biológicas e da Saúde, Universidade Federal do Maranhão-UFMA, São Luís, Brazil
| | - Todd W. Pierson
- Department of Ecology & Evolutionary Biology, University of Tennessee, Knoxville, TN, United States
| | - Benjamin M. Fitzpatrick
- Department of Ecology & Evolutionary Biology, University of Tennessee, Knoxville, TN, United States
| | - Célio F. B. Haddad
- Departamento de Zoologia and Centro de Aquicultura (CAUNESP), Instituto de Biociências, Universidade Estadual Paulista, São Paulo, Brazil
| | - Shirlei M. Recco-Pimentel
- Laboratório de Estudos Cromossômicos (LabEsC), Departamento de Biologia Estrutural e Funcional, Instituto de Biologia, Universidade Estadual de Campinas, São Paulo, Brazil
| | - Luciana Bolsoni Lourenço
- Laboratório de Estudos Cromossômicos (LabEsC), Departamento de Biologia Estrutural e Funcional, Instituto de Biologia, Universidade Estadual de Campinas, São Paulo, Brazil
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Ferro JM, Cardozo DE, Suárez P, Boeris JM, Blasco-Zúñiga A, Barbero G, Gomes A, Gazoni T, Costa W, Nagamachi CY, Rivera M, Parise-Maltempi PP, Wiley JE, Pieczarka JC, Haddad CFB, Faivovich J, Baldo D. Chromosome evolution in Cophomantini (Amphibia, Anura, Hylinae). PLoS One 2018; 13:e0192861. [PMID: 29444174 PMCID: PMC5812657 DOI: 10.1371/journal.pone.0192861] [Citation(s) in RCA: 16] [Impact Index Per Article: 2.7] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/25/2017] [Accepted: 01/31/2018] [Indexed: 11/18/2022] Open
Abstract
The hylid tribe Cophomantini is a diverse clade of Neotropical treefrogs composed of the genera Aplastodiscus, Boana, Bokermannohyla, Hyloscirtus, and Myersiohyla. The phylogenetic relationships of Cophomantini have been comprehensively reviewed in the literature, providing a suitable framework for the study of chromosome evolution. Employing different banding techniques, we studied the chromosomes of 25 species of Boana and 3 of Hyloscirtus; thus providing, for the first time, data for Hyloscirtus and for 15 species of Boana. Most species showed karyotypes with 2n = 2x = 24 chromosomes; some species of the B. albopunctata group have 2n = 2x = 22, and H. alytolylax has 2n = 2x = 20. Karyotypes are all bi-armed in most species presented, with the exception of H. larinopygion (FN = 46) and H. alytolylax (FN = 38), with karyotypes that have a single pair of small telocentric chromosomes. In most species of Boana, NORs are observed in a single pair of chromosomes, mostly in the small chromosomes, although in some species of the B. albopunctata, B. pulchella, and B. semilineata groups, this marker occurs on the larger pairs 8, 1, and 7, respectively. In Hyloscirtus, NOR position differs in the three studied species: H. alytolylax (4p), H. palmeri (4q), and H. larinopygion (1p). Heterochromatin is a variable marker that could provide valuable evidence, but it would be necesserary to understand the molecular composition of the C-bands that are observed in different species in order to test its putative homology. In H. alytolylax, a centromeric DAPI+ band was observed on one homologue of chromosome pair 2. The band was present in males but absent in females, providing evidence for an XX/XY sex determining system in this species. We review and discuss the importance of the different chromosome markers (NOR position, C-bands, and DAPI/CMA3 patterns) for their impact on the taxonomy and karyotype evolution in Cophomantini.
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Affiliation(s)
- Juan M. Ferro
- Laboratorio de Genética Evolutiva, Instituto de Biología Subtropical (CONICET-UNaM), Facultad de Ciencias Exactas Químicas y Naturales, Universidad Nacional de Misiones, Posadas, Misiones, Argentina
| | - Dario E. Cardozo
- Laboratorio de Genética Evolutiva, Instituto de Biología Subtropical (CONICET-UNaM), Facultad de Ciencias Exactas Químicas y Naturales, Universidad Nacional de Misiones, Posadas, Misiones, Argentina
| | - Pablo Suárez
- Instituto de Biología Subtropical (CONICET-UNaM), Puerto Iguazú, Misiones, Argentina
| | - Juan M. Boeris
- Laboratorio de Genética Evolutiva, Instituto de Biología Subtropical (CONICET-UNaM), Facultad de Ciencias Exactas Químicas y Naturales, Universidad Nacional de Misiones, Posadas, Misiones, Argentina
| | - Ailin Blasco-Zúñiga
- Laboratorio de Investigación en Citogenética y Biomoléculas de Anfibios (LICBA), Centro de Investigación para la Salud en América Latina (CISeAL), Pontificia Universidad Católica del Ecuador, Quito, Ecuador
| | - Gastón Barbero
- Centro de Estudios Biomédicos, Biotecnológicos, Ambientales y Diagnóstico, Universidad Maimónides, CONICET, Buenos Aires, Argentina
| | - Anderson Gomes
- Instituto Federal de Educação, Ciência e Tecnologia do Pará, Abaetetuba, Pará, Brazil
| | - Thiago Gazoni
- Departamento de Biologia, Instituto de Biociências, UNESP – Univ. Estadual Paulista, Campus de Rio Claro, São Paulo, Brasil
| | - William Costa
- Departamento de Biologia Estrutural e Funcional, Instituto de Biologia, UNICAMP – Univ. Estadual de Campinas, Campinas, Brasil
| | - Cleusa Y. Nagamachi
- Laboratório de Citogenética, Centro de Estudos Avançados da Biodiversidade, Instituto de Ciências Biológicas, Universidade Federal do Pará, Belém, Pará, Brasil
| | - Miryan Rivera
- Laboratorio de Investigación en Citogenética y Biomoléculas de Anfibios (LICBA), Centro de Investigación para la Salud en América Latina (CISeAL), Pontificia Universidad Católica del Ecuador, Quito, Ecuador
| | - Patricia P. Parise-Maltempi
- Departamento de Biologia, Instituto de Biociências, UNESP – Univ. Estadual Paulista, Campus de Rio Claro, São Paulo, Brasil
| | - John E. Wiley
- The Brody School of Medicine, East Carolina University, Greenville, North Carolina, United States of America
| | - Julio C. Pieczarka
- Laboratório de Citogenética, Centro de Estudos Avançados da Biodiversidade, Instituto de Ciências Biológicas, Universidade Federal do Pará, Belém, Pará, Brasil
| | - Celio F. B. Haddad
- Departamento de Zoologia e Centro de Aquicultura, Instituto de Biociências, UNESP – Univ. Estadual Paulista, Campus de Rio Claro, São Paulo, Brasil
| | - Julián Faivovich
- División Herpetología, Museo Argentino de Ciencias Naturales “Bernardino Rivadavia”—CONICET, Buenos Aires, Argentina
- Departamento de Biodiversidad y Biología Experimental, Facultad de Ciencias Exactas y Naturales, Universidad de Buenos Aires, Buenos Aires, Argentina
| | - Diego Baldo
- Laboratorio de Genética Evolutiva, Instituto de Biología Subtropical (CONICET-UNaM), Facultad de Ciencias Exactas Químicas y Naturales, Universidad Nacional de Misiones, Posadas, Misiones, Argentina
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Santos JS, Introíni GO, Veiga-Menoncello ACP, Blasco A, Rivera M, Recco-Pimentel SM. Comparative sperm ultrastructure of twelve leptodactylid frog species with insights into their phylogenetic relationships. Micron 2016; 91:1-10. [PMID: 27644081 DOI: 10.1016/j.micron.2016.09.003] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/08/2016] [Revised: 09/01/2016] [Accepted: 09/02/2016] [Indexed: 11/29/2022]
Abstract
The spermatozoa of representatives of three Neotropical frog subfamilies, Leiuperinae, Leptodactylinae and Paratelmatobiinae, were observed using Transmission Electron Microscopy, with the aim of identifying ultrastructural traits that provide insights into the phylogenetic relationships among these anurans, which are currently unclear. In the leiuperines, spermatozoa of Physalaemus albifrons, P. cicada, P. deimaticus and P. feioi were characterized by an acrosomal vesicle covering the subacrosomal cone that was not observed in the spermatozoa of Physalaemus centralis and P. cuvieri. The tail of the spermatozoa of P. albifrons, P. centralis, P. cicada, P. cuvieri, P. deimaticus, and P. feioi presented a long undulating membrane, whereas Engystomops petersi and E. freibergi, which form a sister clade to Physalaemus, had an axial fiber, which were absent in Physalaemus. Other leiuperine, E. puyango had an abaxonemal bulb-like swelling distally to the paraxonemal rod, which were also absent in Physalaemus. These differences support the revalidation of Engystomops as a true taxon, distinct from Physalaemus. The tail of the spermatozoa of E. petersi and E. freibergi was similar to that of Paratelmatobius poecilogaster (Paratelmatobiinae). The spermatozoa of Leptodactylus natalenis (Leptodactylinae) had undulating membrane and axial fiber, in contrast with Adenomera marmorata, which lacked these structures. Morphological differences between A. marmorata and L. natalensis sperm cells appeared to validate the allocation of A. marmorata into a genus distinct from Leptodactylus. Overall, dissimilarities in the spermatozoa of the leptodactylids provided an important phylogenetic signal for the understanding of their taxonomic relationships.
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Affiliation(s)
- Julio Sérgio Santos
- Departamento de Biologia Estrutural e Funcional, Instituto de Biologia, Universidade Estadual de Campinas - UNICAMP, 13083-863, Campinas, São Paulo, Brazil.
| | - Gisele Orlandi Introíni
- Departamento de Ciências Básicas da Saúde, Universidade Federal de Ciências da Saúde de Porto Alegre - UFCSPA, 90050-170, Porto Alegre, Rio Grande do Sul, Brazil.
| | - Ana Cristina Prado Veiga-Menoncello
- Departamento de Biologia Estrutural e Funcional, Instituto de Biologia, Universidade Estadual de Campinas - UNICAMP, 13083-863, Campinas, São Paulo, Brazil.
| | - Ailin Blasco
- Escuela de Ciencias Biológicas, Pontifícia Universidad Católica Del Ecuador, Quito, Ecuador.
| | - Miryan Rivera
- Escuela de Ciencias Biológicas, Pontifícia Universidad Católica Del Ecuador, Quito, Ecuador.
| | - Shirlei Maria Recco-Pimentel
- Departamento de Biologia Estrutural e Funcional, Instituto de Biologia, Universidade Estadual de Campinas - UNICAMP, 13083-863, Campinas, São Paulo, Brazil.
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Vittorazzi SE, Lourenço LB, Solé M, Faria RG, Recco-Pimentel SM. Chromosomal analysis of Physalaemus kroyeri and Physalaemus cicada (Anura, Leptodactylidae). Comp Cytogenet 2016; 10:311-23. [PMID: 27551351 PMCID: PMC4977805 DOI: 10.3897/compcytogen.v10i2.9319] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 05/25/2016] [Accepted: 06/25/2016] [Indexed: 05/07/2023]
Abstract
All the species of Physalaemus Fitzinger, 1826 karyotyped up until now have been classified as 2n = 22. The species of the Physalaemus cuvieri group analyzed by C-banding present a block of heterochromatin in the interstitial region of the short arm of pair 5. Physalaemus cicada Bokermann, 1966 has been considered to be a member of the Physalaemus cuvieri species group, although its interspecific phylogenetic relationships remain unknown. The PcP190 satellite DNA has been mapped on the chromosomes of most of the species of the Physalaemus cuvieri group. For two species, Physalaemus cicada and Physalaemus kroyeri (Reinhardt & Lütken, 1862), however, only the chromosome number and morphology are known. Given this, the objective of the present study was to analyze the chromosomes of Physalaemus cicada and Physalaemus kroyeri, primarily by C-banding and PcP190 mapping. The results indicate that Physalaemus kroyeri and Physalaemus cicada have similar karyotypes, which were typical of Physalaemus. In both species, the NORs are located on the long arm of pair 8, and the C-banding indicated that, among other features, Physalaemus kroyeri has the interstitial band on chromosome 5, which is however absent in Physalaemus cicada. Even so, a number of telomeric bands were observed in Physalaemus cicada. The mapping of the PcP190 satellite DNA highlighted areas of the centromeric region of the chromosomes of pair 1 in both species, although in Physalaemus kroyeri, heteromorphism was also observed in pair 3. The cytogenetic evidence does not support the inclusion of Physalaemus cicada in the Physalaemus cuvieri group. In the case of Physalaemus kroyeri, the interstitial band on pair 5 is consistent with the existence of a cytogenetic synapomorphy in the Physalaemus cuvieri species group.
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Affiliation(s)
- Stenio Eder Vittorazzi
- Departamento de Biologia Estrutural e Funcional, Instituto de Biologia, Universidade Estadual de Campinas, 13083-863 Campinas, São Paulo, Brazil
| | - Luciana Bolsoni Lourenço
- Departamento de Biologia Estrutural e Funcional, Instituto de Biologia, Universidade Estadual de Campinas, 13083-863 Campinas, São Paulo, Brazil
| | - Mirco Solé
- Departamento de Ciências Biológicas, Universidade Estadual de Santa Cruz, 45662-000, Ilhéus, Bahia, Brazil
| | - Renato Gomes Faria
- Departamento de Biologia, Centro de Ciências Biológicas e da Saúde, Universidade Federal de Sergipe, 49100-000, São Cristóvão, Sergipe, Brazil
| | - Shirlei Maria Recco-Pimentel
- Departamento de Biologia Estrutural e Funcional, Instituto de Biologia, Universidade Estadual de Campinas, 13083-863 Campinas, São Paulo, Brazil
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Abstract
Background While some transposable elements (TEs) have been found in the sequenced genomes of frog species, detailed studies of these elements have been lacking. In this work, we investigated the occurrence of the Rex1 element, which is widespread in fish, in anurans of the genus Physalaemus. We isolated and characterized the reverse transcriptase (RT)-coding sequences of Rex1 elements of five species of this genus. Results The amino acid sequences deduced from the nucleotide sequences of the isolated fragments allowed us to unambiguously identify regions corresponding to domains 3–7 of RT. Some of the nucleotide sequences isolated from Physlaemus ephippifer and P. albonotatus had internal deletions, suggesting that these fragments are likely not active TEs, despite being derived from a Rex1 element. When hybridized with metaphase chromosomes, Rex1 probes were revealed at the pericentromeric heterochromatic region of the short arm of chromosome 3 of the P. ephippifer karyotype. Neither other heterochromatin sites of the P. ephippifer karyotype nor any chromosomal regions of the karyotypes of P. albonotatus, P. spiniger and P. albifrons were detected with these probes. Conclusions Rex1 elements were found in the genomes of five species of Physalaemus but clustered in only the P. ephippifer karyotype, in contrast to observations in some species of fish, where large chromosomal sites with Rex1 elements are typically present. Electronic supplementary material The online version of this article (doi:10.1186/s13039-015-0189-5) contains supplementary material, which is available to authorized users.
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Affiliation(s)
- Juliana Nascimento
- Departamento de Biologia Estrutural e Funcional, Instituto de Biologia, Universidade Estadual de Campinas, 13083-863 Campinas São Paulo, Brazil
| | - Diego Baldo
- Laboratorio de Genética Evolutiva, Instituto de Biología Subtropical (CONICET-UNaM), Facultad de Ciencias Exactas Químicas y Naturales, Universidad Nacional de Misiones, Félix de Azara 1552, CPA N3300LQF Posadas, Misiones Argentina
| | - Luciana Bolsoni Lourenço
- Departamento de Biologia Estrutural e Funcional, Instituto de Biologia, Universidade Estadual de Campinas, 13083-863 Campinas São Paulo, Brazil
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Lourenço LB, Targueta CP, Baldo D, Nascimento J, Garcia PC, Andrade GV, Haddad CF, Recco-pimentel SM. Phylogeny of frogs from the genus Physalaemus (Anura, Leptodactylidae) inferred from mitochondrial and nuclear gene sequences. Mol Phylogenet Evol 2015; 92:204-16. [DOI: 10.1016/j.ympev.2015.06.011] [Citation(s) in RCA: 49] [Impact Index Per Article: 5.4] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/08/2014] [Revised: 06/16/2015] [Accepted: 06/17/2015] [Indexed: 11/24/2022]
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Vittorazzi SE, Lourenço LB, Recco-Pimentel SM. Long-time evolution and highly dynamic satellite DNA in leptodactylid and hylodid frogs. BMC Genet 2014; 15:111. [PMID: 25316286 PMCID: PMC4201667 DOI: 10.1186/s12863-014-0111-x] [Citation(s) in RCA: 28] [Impact Index Per Article: 2.8] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/14/2014] [Accepted: 10/06/2014] [Indexed: 12/18/2022] Open
Abstract
BACKGROUND Satellite DNA sequences are the most abundant components of heterochromatin and are repeated in tandem hundreds to thousands of times in the genome. However, the number of repeats of a specific satellite family can vary even between the genomes of related species or populations. The PcP190 satellite DNA family was identified in the genome of the leptodactylid frog Physalaemus cuvieri, which showed to be derived most likely from the 5S rDNA in an ancestral species. In this study, we investigate the presence of the PcP190 satellite DNA in several P. cuvieri populations and in four closely related species at the chromosomal and molecular level. Furthermore, we investigate the occurrence of this satellite DNA in the genomes of P. marmoratus as well as in representative species of the leptodactylid genus Leptodactylus (L. latrans) and the hylodid family (Crossodactylus gaudichaudii), all with the aim of investigating if the PcP190 satellite DNA presents or not a restricted distribution. RESULTS The PcP190 satellite DNA was detected in all the analyzed species. Some of them exhibited particular sequence differences, allowing the identification of species-specific groups of sequences, but in other species, the sequences were more conserved. However, in a general analysis, conserved and variable domains have been recognized within the PcP190 monomer. The chromosomal analysis performed on P. cuvieri populations and closely related species revealed high variability of the satellite DNA amount and its chromosomal location, which has always been coincident with regions of centromeric/pericentromeric heterochromatin. CONCLUSION The PcP190 satellite DNA was found in representatives of two families, Leptodactylidae and Hylodidae, indicating that these sequences are widely distributed and conserved in these frogs. There is a pattern of non-random variation within the repeating units, indicating interplay between stochastic events and selective pressure along the PcP190 sequences. Karyotypic differences involving the PcP190 satellite DNA prove to be highly dynamic on the chromosomes of the Physalaemus and its differential accumulation has contributed to the differentiation process of the Z and W sex chromosomes in P. ephippifer.
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Affiliation(s)
- Stenio Eder Vittorazzi
- Departamento de Biologia Estrutural e Funcional, Instituto de Biologia, Universidade Estadual de Campinas, 13083-863 Campinas, São Paulo, Brazil.
| | - Luciana Bolsoni Lourenço
- Departamento de Biologia Estrutural e Funcional, Instituto de Biologia, Universidade Estadual de Campinas, 13083-863 Campinas, São Paulo, Brazil.
| | - Shirlei Maria Recco-Pimentel
- Departamento de Biologia Estrutural e Funcional, Instituto de Biologia, Universidade Estadual de Campinas, 13083-863 Campinas, São Paulo, Brazil.
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