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Pham AV, Ziegler T, Pham CT, Hoang TN, Ngo HT, Le MD. A new skink of the genus Scincella Mittleman, 1950 (Squamata, Scincidae) from Son La Province, northwestern Vietnam. Zookeys 2025; 1226:319-337. [PMID: 39968035 PMCID: PMC11833305 DOI: 10.3897/zookeys.1226.139655] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/18/2024] [Accepted: 12/05/2024] [Indexed: 02/20/2025] Open
Abstract
A new species of the genus Scincella Mittleman, 1950 is described from northern Vietnam based on morphological and molecular evidence. Scincellatruongi sp. nov. is characterized by a combination of the following characters: size medium (SVL up to 59.4 mm); primary temporals 2; external ear opening without lobules; loreals two; supralabials seven or eight; infralabials six or seven; nuchals in three pairs; midbody scales in 28 rows; dorsal scales smooth, in six rows across the back; paravertebral scales 60-67, not widened; ventral scales in 60-70 rows; ten smooth lamellae beneath finger IV and 13-15 beneath toe IV; toes not reaching to fingers when limbs adpressed along body; dorsal surface of body and tail bronze brown with few black spots, a dark stripe running from nostril to eye and extending from posterior corner of eye along upper part of flank to the middle of the tail. In the phylogenetic analyses, the new species is recovered as an independent lineage with no clear sister taxon and at least 17.3% genetic divergence from other species in the genus based on a fragment of the mitochondrial COI gene.
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Affiliation(s)
- Anh Van Pham
- Faculty of Environmental Sciences, University of Science, Vietnam National University, Hanoi, 334 Nguyen Trai Road, 11400 Hanoi, Vietnam
| | - Thomas Ziegler
- Cologne Zoo, Riehler Straße 173, 50735, Cologne, Germany
- Institute of Zoology, University of Cologne, Zülpicher Straße 47b, 50674, Cologne, Germany
| | - Cuong The Pham
- Institute of Ecology and Biological Resources, Vietnam Academy of Science and Technology, 18 Hoang Quoc Viet Road, Hanoi, Vietnam
| | - Thao Ngoc Hoang
- Graduate University of Science and Technology, Vietnam Academy of Science and Technology, 18 Hoang Quoc Viet Road, Cau Giay, Hanoi, Vietnam
| | - Hanh Thi Ngo
- Faculty of Environmental Sciences, University of Science, Vietnam National University, Hanoi, 334 Nguyen Trai Road, 11400 Hanoi, Vietnam
- Cologne Zoo, Riehler Straße 173, 50735, Cologne, Germany
- Institute of Zoology, University of Cologne, Zülpicher Straße 47b, 50674, Cologne, Germany
| | - Minh Duc Le
- Faculty of Environmental Sciences, University of Science, Vietnam National University, Hanoi, 334 Nguyen Trai Road, 11400 Hanoi, Vietnam
- Hong Duc University, Thanh Hoa, Thanh Hoa Province, Vietnam
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Parsons DJ, Green AE, Carstens BC, Pelletier TA. Predicting genetic biodiversity in salamanders using geographic, climatic, and life history traits. PLoS One 2024; 19:e0310932. [PMID: 39423177 PMCID: PMC11488749 DOI: 10.1371/journal.pone.0310932] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/22/2024] [Accepted: 09/09/2024] [Indexed: 10/21/2024] Open
Abstract
The geographic distribution of genetic variation within a species reveals information about its evolutionary history, including responses to historical climate change and dispersal ability across various habitat types. We combine genetic data from salamander species with geographic, climatic, and life history data collected from open-source online repositories to develop a machine learning model designed to identify the traits that are most predictive of unrecognized genetic lineages. We find evidence of hidden diversity distributed throughout the clade Caudata that is largely the result of variation in climatic variables. We highlight some of the difficulties in using machine-learning models on open-source data that are often messy and potentially taxonomically and geographically biased.
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Affiliation(s)
- Danielle J. Parsons
- Museum of Biological Diversity, The Ohio State University, Columbus, Ohio, United States of America
- Department of Evolution, Ecology and Organismal Biology, The Ohio State University, Columbus, Ohio, United States of America
| | - Abigail E. Green
- Department of Biology, Radford University, Radford, Virginia, United States of America
| | - Bryan C. Carstens
- Museum of Biological Diversity, The Ohio State University, Columbus, Ohio, United States of America
- Department of Evolution, Ecology and Organismal Biology, The Ohio State University, Columbus, Ohio, United States of America
| | - Tara A. Pelletier
- Department of Biology, Radford University, Radford, Virginia, United States of America
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Pham AV, Le MD, Nguyen TQ, Le MH, Pham CT, Nguyen AT. First report on population status and potential distribution of Tylototritonsparreboomi Bernardes, Le, Nguyen, Pham, Pham, Nguyen, Rödder, Bonkowski & Ziegler, 2020 (Amphibia, Salamandridae) in Vietnam. Biodivers Data J 2024; 12:e135451. [PMID: 39371083 PMCID: PMC11450382 DOI: 10.3897/bdj.12.e135451] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/24/2024] [Accepted: 09/18/2024] [Indexed: 10/08/2024] Open
Abstract
The Sparreboom's Crocodile Newt (Tylototritonsparreboomi) is a recently discovered species of crocodile newts from Vietnam and it is currently known only from Sin Ho District in Lai Chau Province. Due to the limited information available on its population status and distribution, the species has been classified as Data Deficient in the IUCN Red List. As a result of our field surveys in 2021 and 2022 in north-western Vietnam, novel data on distribution and population status of and threats to this poorly-known species were collected. We combined the newly-discovered locations with previous occurrence records and used the data as input for modelling the potential distribution of the Sparreboom's Crocodile Newt. The results showed that the Sparreboom's Crocodile Newt's potential distribution encompasses areas in Lai Chau, Dien Bien and Son La Provinces, Vietnam, as well as a section in Jinping County, Yunnan Province, China. Based on the findings, we suggest that protected areas in the eastern side of Hoang Lien Mountain Range, such as Che Tao, Muong La, Hoang Lien - Van Ban and Bat Xat Nature Reserves and Hoang Lien National Park in Vietnam and Jinping Feishuling Nature Reserve in China be priority sites for the species conservation. Future research and conservation initiatives should prioritise efforts in such areas in an effort to find and protect new populations of the newt.
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Affiliation(s)
- Anh Van Pham
- Faculty of Environmental Sciences, University of Science, Vietnam National University, Hanoi, Hanoi, VietnamFaculty of Environmental Sciences, University of Science, Vietnam National University, HanoiHanoiVietnam
| | - Minh Duc Le
- Faculty of Environmental Sciences, University of Science, Vietnam National University, Hanoi, Hanoi, VietnamFaculty of Environmental Sciences, University of Science, Vietnam National University, HanoiHanoiVietnam
- Central Institute for Natural Resources and Environmental Studies, Vietnam National University, Hanoi, Hanoi, VietnamCentral Institute for Natural Resources and Environmental Studies, Vietnam National University, HanoiHanoiVietnam
- Department of Herpetology, American Museum of Natural History, Central Park West at 79th Street, New York, USA, Virgin Islands (USA)Department of Herpetology, American Museum of Natural History, Central Park West at 79th StreetNew York, USAVirgin Islands (USA)
| | - Truong Quang Nguyen
- Institute of Ecology and Biological Resources, Vietnam Academy of Science and Technology, Hanoi, VietnamInstitute of Ecology and Biological Resources, Vietnam Academy of Science and TechnologyHanoiVietnam
- Graduate University of Science and Technology, VAST, Hanoi, VietnamGraduate University of Science and Technology, VASTHanoiVietnam
| | - Mai Huyen Le
- Faculty of Biology, Vietnam National University, Hanoi, Hanoi, VietnamFaculty of Biology, Vietnam National University, HanoiHanoiVietnam
| | - Cuong The Pham
- Institute of Ecology and Biological Resources, Vietnam Academy of Science and Technology, Hanoi, VietnamInstitute of Ecology and Biological Resources, Vietnam Academy of Science and TechnologyHanoiVietnam
| | - Anh Tuan Nguyen
- Faculty of Environmental Sciences, University of Science, Vietnam National University, Hanoi, Hanoi, VietnamFaculty of Environmental Sciences, University of Science, Vietnam National University, HanoiHanoiVietnam
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Phung TM, Pham CT, Nguyen TQ, Ninh HT, Nguyen HQ, Bernardes M, Le ST, Ziegler T, Nguyen TT. Southbound - the southernmost record of Tylototriton (Amphibia, Caudata, Salamandridae) from the Central Highlands of Vietnam represents a new species. Zookeys 2023; 1168:193-218. [PMID: 38328626 PMCID: PMC10848839 DOI: 10.3897/zookeys.1168.96091] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/07/2022] [Accepted: 05/29/2023] [Indexed: 02/09/2024] Open
Abstract
A new species of the genus Tylototriton is described from Ngoc Linh Mountain, Kon Tum Province, in the Central Highlands of Vietnam based on integrative taxonomy, namely by combining molecular and morphological evidence. Tylototritonngoclinhensissp. nov. differs from all other congeners based on morphological data, allopatric distribution, and molecular divergence. In terms of genetic divergence, Tylototritonngoclinhensissp. nov. distinctly differs from the sister species T.panhai (6.77%) and from T.ngarsuensis (12.36%) based on the mitochondrial NADH dehydrogenase subunit 2 (ND2) gene. Tylototritonngoclinhensissp. nov. is a moderate sized and robust salamander species with large cephalic edges, parotoids, and vertebral ridge orange in coloration. The new taxon differs from its congeners by a combination of the following morphological characteristics: size medium (SVL 60.8-66.5 mm, TL 57.6-61.8 mm in males, and SVL 72.5-75.6 mm, TL 62.9-67.9 mm in females); head longer than wide; parotoids very prominent and enlarged, projecting backwards; tail length shorter than snout-vent length; vertebral ridge large, high and glandular in appearance; 14 large and distinct dorsolateral glandular warts; gular fold present; tips of fore and hind limbs overlapping when adpressed along the body; tips of fingers reaching between eye and nostril when foreleg is laid forward; dorsal surface and lateral sides of the head, upper and lower lips, dorsolateral glandular warts, vertebral ridge, the peripheral area of the cloaca and the ventral edge of the tail orange in coloration; the presence of a distinct black line extending from the posterior end of the eye towards the shoulder. Tylototritonngoclinhensissp. nov. is restricted to evergreen montane forests near water bodies on Ngoc Linh Mountain. We suggest that the new species should be classified as Endangered (EN) in the IUCN Red List. This new important discovery represents the eighth Tylototriton taxon described from Vietnam, and at the same time constitutes the southernmost distributional record for the whole genus in Asia.
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Affiliation(s)
- Trung My Phung
- Dong Khoi 9A, Tam Hiep, Bien Hoa, Dong Nai Province, VietnamUnaffiliatedBien HoaVietnam
| | - Cuong The Pham
- Institute of Ecology and Biological Resources, Vietnam Academy of Science and Technology, 18 Hoang Quoc Viet Road, Hanoi 10072, VietnamInstitute of Ecology and Biological Resources, Vietnam Academy of Science and TechnologyHanoiVietnam
- Graduate University of Science and Technology, Vietnam Academy of Science and Technology, 18 Hoang Quoc Viet Road, Cau Giay, Hanoi 10072, VietnamGraduate University of Science and TechnologyHanoiVietnam
| | - Truong Quang Nguyen
- Institute of Ecology and Biological Resources, Vietnam Academy of Science and Technology, 18 Hoang Quoc Viet Road, Hanoi 10072, VietnamInstitute of Ecology and Biological Resources, Vietnam Academy of Science and TechnologyHanoiVietnam
- Graduate University of Science and Technology, Vietnam Academy of Science and Technology, 18 Hoang Quoc Viet Road, Cau Giay, Hanoi 10072, VietnamGraduate University of Science and TechnologyHanoiVietnam
| | - Hoa Thi Ninh
- Institute of Genome Research, Vietnam Academy of Science and Technology, 18 Hoang Quoc Viet Road, Hanoi 10072, VietnamInstitute of Genome Research, Vietnam Academy of Science and TechnologyHanoiVietnam
| | - Huy Quoc Nguyen
- Vietnam National Museum of Nature, Vietnam Academy of Science and Technology, 18 Hoang Quoc Viet Road, Hanoi 10072, VietnamVietnam National Museum of Nature, Vietnam Academy of Science and TechnologyHanoiVietnam
| | - Marta Bernardes
- Cologne Zoo, Riehler Str. 173, D–50735 Cologne, GermanyCologne ZooCologneGermany
- Institute of Zoology, University of Cologne, Zülpicher Str. 47b, D–50674 Cologne, GermanyUniversity of CologneCologneGermany
| | - Son Thanh Le
- National Institute of Medicinal Materials, 43 Đinh Tien Hoang, Ben Nghe, Ho Chi Minh city, VietnamNational Institute of Medicinal MaterialsHo Chi Minh CityVietnam
| | - Thomas Ziegler
- Cologne Zoo, Riehler Str. 173, D–50735 Cologne, GermanyCologne ZooCologneGermany
- Institute of Zoology, University of Cologne, Zülpicher Str. 47b, D–50674 Cologne, GermanyUniversity of CologneCologneGermany
| | - Tao Thien Nguyen
- Institute of Genome Research, Vietnam Academy of Science and Technology, 18 Hoang Quoc Viet Road, Hanoi 10072, VietnamInstitute of Genome Research, Vietnam Academy of Science and TechnologyHanoiVietnam
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Krzikowski M, Nguyen TQ, Pham CT, Rödder D, Rauhaus A, Le MD, Ziegler T. Assessment of the threat status of the amphibians in Vietnam - Implementation of the One Plan Approach. NATURE CONSERVATION 2022. [DOI: 10.3897/natureconservation.49.82145] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 11/12/2022]
Abstract
The current decline in global biodiversity is most evident in amphibians with 41% percent of all species worldwide classified as threatened with extinction. Hence, a major challenge in amphibian conservation is the high number of threatened species, leading to a common approach of identifying priority species and regions for conservation efforts. As a part of one of 36 globally designated biodiversity hotspots, Vietnam is considered to be of particular importance for conservation action. To improve amphibian conservation in Vietnam, this study provides an updated species list and assesses their threat status by compiling data from a variety of sources. Furthermore, a Zoological Information Management System (ZIMS) analysis was conducted to determine the representation of extant amphibians from Vietnam in zoos worldwide. The batrachofauna of Vietnam is characterized by a high level of species richness and local endemism as well as a high rate of new discoveries, with more than half of the endemic species reported exclusively from their type locality, making them especially vulnerable to extinction. Up to 18% of all amphibians extant in Vietnam and 28% of endemic species are classified as threatened with extinction by the IUCN. In many cases, the IUCN Red List status is either missing or outdated, highlighting the urgent need of action. Around 14% of endemic amphibian species have been recorded exclusively from unprotected areas, suggesting prioritization for further research and conservation measures. The continuing decline in many species remains an unresolved problem. As a guide for future research and conservation measures, a list of the top 57 species was compiled. In addition, according to the ZIMS analysis, only 8% of threatened and 3% of endemic amphibian taxa from Vietnam are currently kept in zoos worldwide, and a richness analysis revealed that the highest density of husbandries is found in Europe and North America. To achieve maximum outcome for the conservation of threatened species, this study recommends a general shift by zoos towards maintaining species in greater need of captive assurance populations and breeding programs to support integrative strategies that combine in situ and ex situ conservation efforts following the IUCN’s One Plan Approach.
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OUP accepted manuscript. Zool J Linn Soc 2022. [DOI: 10.1093/zoolinnean/zlac038] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/13/2022]
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Pomchote P, Peerachidacho P, Hernandez A, Sapewisut P, Khonsue W, Thammachoti P, Nishikawa K. A new species of the genus Tylototriton (Urodela, Salamandridae) from western Thailand. Zookeys 2021; 1072:83-105. [PMID: 34899008 PMCID: PMC8626410 DOI: 10.3897/zookeys.1072.75320] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/15/2021] [Accepted: 11/01/2021] [Indexed: 11/21/2022] Open
Abstract
We describe a new species of the newt genus Tylototriton from Umphang Wildlife Sanctuary, Tak Province, western Thailand based on molecular and morphological evidence and named here as Tylototritonumphangensissp. nov. The new species is assigned to the subgenus Tylototriton and differs from other species in having dark-brown to blackish-brown body and limbs, truncate snout, prominent antero-medial ends of the expansion of the dentary bones, laterally protruding quadrate regions, indistinct and small rib nodules, a well-segmented vertebral ridge, and rough dorsolateral bony ridges, which are steeper anterior, and curved medially at the posterior ends. The molecular data show that Tylototritonumphangensissp. nov. differs from T.uyenoi sensu stricto by a 5% genetic sequence divergence of the mitochondrial NADH dehydrogenase subunit 2 region gene. The new species and T.uyenoi are both endemic to Thailand, distributed along the Northwest Thai (Dawna) Uplands of Indochina. To clarify the species boundary between Tylototritonumphangensissp. nov. and T.uyenoi, additional field research is needed in adjacent areas. Tylototritonumphangensissp. nov. is restricted to evergreen hill forests in Umphang Wildlife Sanctuary. We suggest that the new species should be classified as Endangered (EN) in the IUCN Red List.
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Affiliation(s)
- Porrawee Pomchote
- Department of Biology, Faculty of Science, Chulalongkorn University, Bangkok 10330, Thailand
| | - Parada Peerachidacho
- Department of Biology, Faculty of Science, Chulalongkorn University, Bangkok 10330, Thailand
| | - Axel Hernandez
- Department of Environmental Sciences, Faculty of Sciences and Technics, University Pasquale Paoli of Corsica, Corte 20250, France.,Laboratory for Amphibian Systematic and Evolutionary Research, College of Biology and Environment, Nanjing Forestry University, Nanjing 210000, China
| | - Pitak Sapewisut
- Department of Biology, Faculty of Science, Chiang Mai University, Chiang Mai 50200, Thailand
| | - Wichase Khonsue
- Department of Biology, Faculty of Science, Chulalongkorn University, Bangkok 10330, Thailand
| | - Panupong Thammachoti
- Department of Biology, Faculty of Science, Chulalongkorn University, Bangkok 10330, Thailand
| | - Kanto Nishikawa
- Graduate School of Global Environmental Studies, Kyoto University, Kyoto 606-8501, Japan.,Graduate School of Human and Environmental Studies, Kyoto University, Kyoto 606-8501, Japan
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Lyu ZT, Wang J, Zeng ZC, Zhou JJ, Qi S, Wan H, Li YY, Wang YY. A new species of the genus Tylototriton (Caudata, Salamandridae) from Guangdong, southern China, with discussion on the subgenera and species groups within the genus. VERTEBRATE ZOOLOGY 2021. [DOI: 10.3897/vz.71.e73563] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 11/12/2022]
Abstract
In this work, a new species of the genus Tylototriton is described from Guangdong, southern China. Tylototriton sini sp. nov. was recorded as T. asperrimus for decades, and was indicated to represent an independent lineage based on recent molecular phylogenetic analyses. After detailed molecular analysis and morphological comparisons, Tylototriton sini sp. nov. is recognized as a distinct species which can be clearly distinguished from all known congeners by a combination of morphological characteristics and the significant divergence in the mitochondrial gene. Because the genus Tylototriton is of high conservation concern and all formally described members are protected by law, we also provide first data on the conservation status and recommendations for IUCN categorization for Tylototriton sini sp. nov. A suggestion on the species groups division of the genus Tylototriton is also provided based on their morphological differences and phylogenetic relationships.
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Pomchote P, Peerachidacho P, Sapewisut P, Hernandez A, Onishi Y, Nishikawa K. Description of the Himalayan newt Tylototriton verrucosus (Urodela: Salamandridae) in northern Thailand with its phylogenetic relationships, distribution, and conservation status. JOURNAL OF ASIA-PACIFIC BIODIVERSITY 2021. [DOI: 10.1016/j.japb.2021.10.006] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/19/2022] Open
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Osathanunkul M, Minamoto T. eDNA‐based detection of a vulnerable crocodile newt (
Tylototriton uyenoi
) to influence government policy and raise public awareness. DIVERS DISTRIB 2021. [DOI: 10.1111/ddi.13236] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/27/2022] Open
Affiliation(s)
- Maslin Osathanunkul
- Department of Biology Faculty of Science Chiang Mai University Chiang MaiThailand
- Research Center in Bioresources for Agriculture, Industry and Medicine Chiang Mai University Chiang MaiThailand
| | - Toshifumi Minamoto
- Graduate School of Human Development and Environment Kobe University Hyogo Japan
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