Changes in Structural and Functional Responses of Bacterial Communities under Different Levels of Long-Term Compost Application in Paddy Soils

Responses of methane production and methanogenic pathways to polystyrene nanoplastics exposure in paddy soil

Nanoplastics (NPs) have attracted increasing attention within terrestrial ecosystems. However, our understanding of their impacts on the intricate anaerobic methanogenesis processes occurring in paddy soils microbial communities remains limited with respect to nanoplastics shape, function, and metabolic effects. Herein, we explored the effects of polystyrene nanoplastics (PS-NPs) and microplastics (PS-MPs) on anaerobic methanogenesis in a typical paddy soil. The results show that PS-NPs delayed methane production and the time to reach peak acetate content in incubation process of paddy soils, and the methanogenic rate increased rapidly after 13 days, with a maximum increase of 87.97%. However, PS-MPs had no marked effect on CH4, CO2 and acetate production. In addition, PS-NPs affected soil physicochemical properties by reducing pH and increasing electrical conductivity. Acetoclastic methanogens were enriched and the relative abundance of the genes ackA, pta, ACSS, cdhC, cdhD and cdhE in the acetoclastic pathways were significantly increased under PS-NPs exposure. In addition, PS-MPs had significant effect on the microbial community structure but no effect on methanogenic pathways of the paddy soils. This study provides important insights into the response of key microorganisms, functional genes and methanogenesis pathways to NPs during anaerobic methanogenesis in paddy soils.

Impacts of microplastics addition on sediment environmental properties, enzymatic activities and bacterial diversity

Environmental microplastic accumulation can lead to a range of problems and the potential loss of ecosystem services. However, the impacts of microplastics on sediment environmental properties and microbial ecosystems remain unclear. Therefore, this article aimed to better elucidate the effects of microplastics on sediment physicochemical properties, enzymatic activities and the diversity and composition of sediment microbial communities. We conducted a 60-day sediment-incubation experiment using sediments with three concentrations (2%, 5%, and 10%, w/w) and two types (polyethylene (PE) and polyvinyl chloride (PVC)) of microplastics (550 μm) in a climate-controlled chamber. The addition of both PE and PVC microplastics reduced sediment catalase, polyphenol oxidase (PO), and urease activities, and decreased physicochemical indicators, including total organic carbon (TOC), total nitrogen (TN), and pH value. In addition, microplastics reduced bacterial community diversity and inhibited the recovery of community richness, implying that microplastics may compete with sediment microorganisms for niches. Stronger effects were generally detected under a high microplastic concentration (10%), reflecting the influence of the concentration of microplastic exposure on the bacterial community. The dominant bacterial phyla were Chloroflexi, Proteobacteria, Bacteroidota, Firmicutes, and Actinobacteriota, and the relative abundances of Proteobacteria, and Bacteroidota significantly increased in the microplastic treatments during the late incubation period, indicating that microplastic addition may have improved nutritional conditions later in the incubation process. Structural equation modeling indicated that shifts in PO activity had a significant correlation with changes in Proteobacteria abundance (P < 0.01), and important drivers affecting the dissimilarity of Bacteroidota abundance were the changes of TN content and catalase activity (P < 0.05). These results indicated that microplastics with diverse characteristics affected the environmental properties of the sediment, while the physicochemical properties and enzymatic activity of the sediment could directly or indirectly exert different impacts on the dominant bacteria. This study can provide a theoretical basis for the ecological effects of microplastic contamination.

Rhizosphere bacteria community and functions under typical natural halophyte communities in North China salinized areas

Soil salinity is a serious environmental issue in arid China. Halophytes show extreme salt tolerance and are grow in saline-alkaline environments. There rhizosphere have complex bacterial communities, which mediate a variety of interactions between plants and soil. High-throughput sequencing was used to investigated rhizosphere bacterial community changes under the typical halophyte species in arid China. Three typical halophytes were Leymus chinensis (LC), Puccinellia tenuiflora (PT), Suaeda glauca (SG). The dominant phyla were Proteobacteria, Actinobacteria, Chloroflexi, Gemmatimonadetes, Acidobacteria and Bacteroidetes, Suaeda glauca rhizosphere has stronger enrichment of Nitrospirae and Cyanobacteria. The Ace, Chao and Shannon indices were significantly higher in soils under LC and SG (P<0.05). Functional predictions, based on 16S rRNA gene by PICRUSt, indicated that Energy metabolism, Amino acid metabolism, Carbohydrate metabolism and Fatty acid metabolism are dominant bacterial functions in three halophytes rhizosphere soil. Carbon metabolism, Oxidative phosphorylation, Methane metabolism, Sulfur metabolism and Nitrogen metabolism in SG were significantly higher than that in LC and PT. Regression analysis revealed that rhizosphere soil bacterial community structure is influenced by soil organic matter (SOM) and soil water content (SWC), while soil bacterial community diversity is affected by soil pH. This study contributes to our understanding of the distribution characteristics and metabolic functions under different halophyte rhizosphere bacterial communities, and will provide references for the use of rhizosphere bacteria to regulate the growth of halophytes and ecological restoration of saline soil.

Response of soil enzyme activities and bacterial communities to the accumulation of microplastics in an acid cropped soil

The ecological stress of microplastics (MPs) contamination in agroecosystems raise worldwide concerns. However very few studies concentrated on the effects of MPs exposure on soil microbial community. The alterations of enzymatic activities and bacterial communities were assayed by spiking 1% and 5% (w/w) of polyethylene (PE) and polyvinyl chloride (PVC) MPs in an acid soil. The results showed that both PE and PVC addition inhibited fluorescein diacetate hydrolase activity and stimulated urease and acid phosphatase activities, and declined the richness and diversity of the bacterial communities. More severe effects were observed in the PE treated soils compared to the PVC treated soils generally. The relative abundances of families Burkholderiaceae increased significantly (p < .05) after MPs addition, suggesting the bacteria associated with nitrogen fixation stimulated by the MPs input. Meanwhile, significant (p < .05) decline of Sphingomonadaceae and Xanthobacteraceae after addition of 5% PVC and 1% PE MPs, respectively implied that MPs might inhibit the biodegradation of xenobiotics in the soil. Mover, the PICRUSt analysis demonstrated that membrane transporter was a sensitive prediction functional gene of microplastics exposure in the soil. Future studies could be focused on the role of MPs on the regulation of nitrogen cycling and organic compounds degradation in soils.