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Pilavtepe-Celik M, Yagiz Y, Marshall MR, Balaban MO. Correlation of Mullet ( Mugil cephalus) Fillet Color Changes with Chemical and Sensory Attributes during Storage at 0°C. JOURNAL OF AQUATIC FOOD PRODUCT TECHNOLOGY 2021. [DOI: 10.1080/10498850.2021.1895394] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 10/21/2022]
Affiliation(s)
- Mutlu Pilavtepe-Celik
- Food and Environmental Toxicology Laboratory, Food Science and Human Nutrition Department, University of Florida, Gainesville, Florida, USA
| | - Yavuz Yagiz
- Food and Environmental Toxicology Laboratory, Food Science and Human Nutrition Department, University of Florida, Gainesville, Florida, USA
| | - Maurice R. Marshall
- Food and Environmental Toxicology Laboratory, Food Science and Human Nutrition Department, University of Florida, Gainesville, Florida, USA
| | - Murat O. Balaban
- Department of Chemical and Materials Engineering, University of Auckland, Auckland, New Zealand
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Yeoman CJ, Thomas SM, Miller MEB, Ulanov AV, Torralba M, Lucas S, Gillis M, Cregger M, Gomez A, Ho M, Leigh SR, Stumpf R, Creedon DJ, Smith MA, Weisbaum JS, Nelson KE, Wilson BA, White BA. A multi-omic systems-based approach reveals metabolic markers of bacterial vaginosis and insight into the disease. PLoS One 2013; 8:e56111. [PMID: 23405259 PMCID: PMC3566083 DOI: 10.1371/journal.pone.0056111] [Citation(s) in RCA: 90] [Impact Index Per Article: 8.2] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/16/2012] [Accepted: 01/09/2013] [Indexed: 01/28/2023] Open
Abstract
BACKGROUND Bacterial vaginosis (BV) is the most common vaginal disorder of reproductive-age women. Yet the cause of BV has not been established. To uncover key determinants of BV, we employed a multi-omic, systems-biology approach, including both deep 16S rRNA gene-based sequencing and metabolomics of lavage samples from 36 women. These women varied demographically, behaviorally, and in terms of health status and symptoms. PRINCIPAL FINDINGS 16S rRNA gene-based community composition profiles reflected Nugent scores, but not Amsel criteria. In contrast, metabolomic profiles were markedly more concordant with Amsel criteria. Metabolomic profiles revealed two distinct symptomatic BV types (SBVI and SBVII) with similar characteristics that indicated disruption of epithelial integrity, but each type was correlated to the presence of different microbial taxa and metabolites, as well as to different host behaviors. The characteristic odor associated with BV was linked to increases in putrescine and cadaverine, which were both linked to Dialister spp. Additional correlations were seen with the presence of discharge, 2-methyl-2-hydroxybutanoic acid, and Mobiluncus spp., and with pain, diethylene glycol and Gardnerella spp. CONCLUSIONS The results not only provide useful diagnostic biomarkers, but also may ultimately provide much needed insight into the determinants of BV.
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Affiliation(s)
- Carl J. Yeoman
- Department of Animal and Range Sciences, Montana State University, Bozeman, Montana, United States of America
- The Institute for Genomic Biology, University of Illinois, Urbana, Illinois, United States of America
| | - Susan M. Thomas
- The Institute for Genomic Biology, University of Illinois, Urbana, Illinois, United States of America
| | - Margret E. Berg Miller
- The Institute for Genomic Biology, University of Illinois, Urbana, Illinois, United States of America
| | - Alexander V. Ulanov
- Biotechnology Center, University of Illinois, Urbana, Illinois, United States of America
| | - Manolito Torralba
- J. Craig Venter Institute, Maryland Campus, Rockville, Maryland, United States of America
| | - Sarah Lucas
- J. Craig Venter Institute, Maryland Campus, Rockville, Maryland, United States of America
| | - Marcus Gillis
- J. Craig Venter Institute, Maryland Campus, Rockville, Maryland, United States of America
| | - Melissa Cregger
- The Institute for Genomic Biology, University of Illinois, Urbana, Illinois, United States of America
| | - Andres Gomez
- The Institute for Genomic Biology, University of Illinois, Urbana, Illinois, United States of America
| | - Mengfei Ho
- Department of Microbiology, University of Illinois, Urbana, Illinois, United States of America
| | - Steven R. Leigh
- Department of Anthropology, University of Illinois, Urbana, Illinois, United States of America
| | - Rebecca Stumpf
- Department of Anthropology, University of Illinois, Urbana, Illinois, United States of America
| | - Douglas J. Creedon
- The Department of Obstetrics and Gynecology, The Mayo Clinic, Rochester, Minnesota, United States of America
| | - Michael A. Smith
- Department of Obstetrics and Gynecology, Christie Clinic, Urbana, Illinois, United States of America
| | - Jon S. Weisbaum
- Department of Obstetrics and Gynecology, Carle Clinic, Urbana, Illinois, United States of America
| | - Karen E. Nelson
- J. Craig Venter Institute, Maryland Campus, Rockville, Maryland, United States of America
| | - Brenda A. Wilson
- The Institute for Genomic Biology, University of Illinois, Urbana, Illinois, United States of America
- Department of Microbiology, University of Illinois, Urbana, Illinois, United States of America
| | - Bryan A. White
- The Institute for Genomic Biology, University of Illinois, Urbana, Illinois, United States of America
- Department of Animal Sciences, University of Illinois, Urbana, Illinois, United States of America
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