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Liu H, Zhang X, Hu Y, Zhao X. Association analysis of mitochondrial genome polymorphisms with backfat thickness in pigs. Anim Biotechnol 2023; 35:2272172. [PMID: 37966129 DOI: 10.1080/10495398.2023.2272172] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/16/2023]
Abstract
Mitochondrial DNA (mtDNA) variations and associated effects on economic traits have been widely reported in farm animals, as these genetic polymorphisms can affect the efficiency of energy production and cell metabolism. In studies related to metabolism, the deposition of fat was highly correlated with mitochondria. However, the effect of mtDNA polymorphisms on porcine backfat thickness (BFT) remained unclear. In this study, 243 pigs were collected to analyse the relationship between BFT and mtDNA polymorphisms. There were considerable differences in BFT, ranging from 5 mm to 18 mm. MtDNA D-loop sequencing discovered 48 polymorphic sites. Association analysis revealed that 30 variations were associated with BFT (P < 0.05). The polymorphism m.794A > G showed the maximum difference in BFT between A and G carriers, which differed at ∼2.5 mm (P < 0.001). The 48 polymorphic sites generated 22 haplotypes (H1-H22), which clustered into 4 haplogroups (HG1-HG4). HG1 had a lower BFT value than other three haplogroups (P < 0.01), whereas H4 in HG1 exhibited the lowest BFT of all haplotypes analyzed (P < 0.01). The results of this study highlight an association between mtDNA polymorphisms and BFT, and suggest the potential application of mtDNA in pig molecular breeding practices.
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Affiliation(s)
- Hao Liu
- State Key Laboratory of Animal Biotech Breeding, China Agricultural University, Beijing, China
- MOE Key Laboratory for Biosystems Homeostasis and Protection and Innovation Center for Cell Signaling Network, Life Sciences Institute, Zhejiang University, Hangzhou, Zhejiang, China
| | - Xing Zhang
- State Key Laboratory of Animal Biotech Breeding, China Agricultural University, Beijing, China
- Guangdong Provincial Key Laboratory of Animal Molecular Design and Precise Breeding; School of Life Science and Engineering, Foshan University, Foshan, China
- School of Biology and Biological Engineering, South China University of Technology, Guangzhou, China
| | - Yaning Hu
- State Key Laboratory of Animal Biotech Breeding, China Agricultural University, Beijing, China
| | - Xingbo Zhao
- State Key Laboratory of Animal Biotech Breeding, China Agricultural University, Beijing, China
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Hoque MR, Kim IH. Effect of non-starch polysaccharide enzyme supplementation with gradually reduced energy diet on growth performance, nutrient digestibility, lean meat percentage and backfat thickness of growing pigs. J Anim Physiol Anim Nutr (Berl) 2023; 107:574-580. [PMID: 35718994 DOI: 10.1111/jpn.13744] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/11/2022] [Revised: 04/25/2022] [Accepted: 05/25/2022] [Indexed: 11/28/2022]
Abstract
This study was conducted with the objective of evaluating a way to reduce feed costs with better meat characteristics for growing pigs by supplementing non-starch polysaccharide enzyme (NSPE) in energy reduced diets. A total of 200 growing pigs [(Landrace × Yorkshire) × Duroc] weighing 22.94 ± 0.22 kg were divided into five dietary treatments, each with eight replication pens (three barrows and two gilts). The pigs were allotted in a completely randomised block design according to body weight and sex. The dietary treatments were: CON (control), basal diet (NE 2500 kcal); NSPE1, basal diet + 0.04% NSPE; NSPE2, (basal diet-20 kcal) + 0.04% NSPE; NSPE3, (basal diet-30 kcal) + 0.04% NSPE; NSPE4, (basal diet-50 kcal) + 0.04% NSPE. We have assessed growth performance, lean meat percentage (LMP) and backfat thickness at initial, Week 4 and 8. Apparent nutrient digestibility was assessed in Weeks 4 and 8. There was no significant difference (p > 0.05) among the groups on growth performance. In Week 8, gradual reduction of energy caused a linear reduction (p = 0.028) of backfat thickness and a linear increase (p < 0.05) of LMP. In addition, at Week 8, supplementation of NSPE enzyme showed improved digestibility of nitrogen (p < 0.05) and energy (p < 0.05) in the NSPE1 group than in the CON group. In short, gradual reduction of dietary energy supplemented with NSPE showed consistent growth performance through higher nutrient digestibility with positive changes in backfat thickness and LMP of growing pigs.
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Affiliation(s)
- Md Raihanul Hoque
- Department of Animal Resource & Science, Dankook University, Cheonan-si, Chungnam, South Korea
| | - In Ho Kim
- Department of Animal Resource & Science, Dankook University, Cheonan-si, Chungnam, South Korea
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Lim SW, Jeon JH, Lim B, Jang MJ, Kim DH, Kim CH, Kim JM. Blood transcriptomic differences in the immune response under stressful environmental according to stocking density in pigs. J Anim Sci 2023; 101:skad336. [PMID: 37798138 PMCID: PMC10655785 DOI: 10.1093/jas/skad336] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/20/2023] [Accepted: 10/05/2023] [Indexed: 10/07/2023] Open
Abstract
The implementation of animal welfare in the pig industry is becoming a global trend, and welfare can be improved through livestock management. In modern and intensive farming systems, it has become important to find a reasonable compromise between stocking density and productivity. The simultaneous detection of behavioral and physiological parameters is helpful when considering welfare levels for stocking density. This study aimed to confirm the effect of stocking density through transcriptome linkage. A comparison of three groups according to stocking density (low density, eight pigs and 1.0 m2 per head; normal density, eight pigs and 0.8 m2 per head; and high density, eight pigs and 0.6 m2 per head) was performed, and their transcriptomic changes were observed using the RNA-Seq method. Differentially expressed genes were identified for each comparison group (low density vs. normal density, 95 upregulated genes and 112 downregulated genes; high density vs. normal density, 133 upregulated genes and 217 downregulated genes; and high density vs. low density, 245 upregulated genes and 237 downregulated genes). Biological mechanisms according to stocking density were identified through functional annotation. T-cell differentiation and immune disease pathway enriched in the high-density group caused immune imbalance through dysregulated T-cell signaling. Moreover, oxidative stress, together with DNA damage, can lead to high susceptibility to disease. Our study confirmed the biological mechanisms through immunological expression patterns according to stocking density. The study results are expected to provide comprehensive insight into systematic operation strategies considering stocking density and biomarkers for use in welfare evaluation.
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Affiliation(s)
- Seok-Won Lim
- Department of Animal Science and Technology, Chung-Ang University, Anseong, Gyeonggi-do 17546, Republic of Korea
| | - Jung Hwan Jeon
- Animal Welfare Research Team, National Institute of Animal Science, Rural Development Agriculture, Wanju 55365, Republic of Korea
| | - Byeonghwi Lim
- Department of Animal Science and Technology, Chung-Ang University, Anseong, Gyeonggi-do 17546, Republic of Korea
| | - Min-Jae Jang
- Department of Animal Science and Technology, Chung-Ang University, Anseong, Gyeonggi-do 17546, Republic of Korea
| | - Doo-Hwan Kim
- Division of Animal Science, Agri-Food Bio Convergence Institute, Gyeongsang National University, Jinju 52725, Republic of Korea
| | - Chan Ho Kim
- Animal Welfare Research Team, National Institute of Animal Science, Rural Development Agriculture, Wanju 55365, Republic of Korea
| | - Jun-Mo Kim
- Department of Animal Science and Technology, Chung-Ang University, Anseong, Gyeonggi-do 17546, Republic of Korea
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Hoa VB, Seo HW, Seong PN, Cho SH, Kang SM, Kim YS, Moon SS, Choi YM, Kim JH, Seol KH. Back-fat thickness as a primary index reflecting the yield and overall acceptance of pork meat. Anim Sci J 2021; 92:e13515. [PMID: 33522042 DOI: 10.1111/asj.13515] [Citation(s) in RCA: 11] [Impact Index Per Article: 3.7] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/12/2020] [Revised: 04/19/2020] [Accepted: 04/30/2020] [Indexed: 11/29/2022]
Abstract
Predicting aspects of lean meat yield and eating quality of pork based on some particular carcass traits become increasingly important from an economic profitability point of view. The present study aimed to determine the relationship between the back-fat (BF) thickness with lean meat yield and meat quality traits of crossbred pigs. A total of 220 crossbred pigs [(Landrace × Yorkshire) ♀ × Duroc ♂] reared under identical conditions and harvested at 180 days old were slaughtered and screened for BF thickness. Four BF thickness groups: 12-15, 16-20, 21-25, and 26-30 mm were classified, and longissimus dorsi (LD) muscles from these groups were used to analyze meat quality characteristics. Results showed that increasing BF thickness decreased the lean meat yield and loin lean area. Increasing BF thickness up to 26-30 mm increased intramuscular fat content and pH of LD muscles. The LD muscles of the thicker BF (21-30 mm) groups received significantly higher flavor, juiciness, and overall acceptability scores than those of the thinner back-fat (12-20 mm) groups. Overall, when all the pre-harvest factors are kept the same, BF thickness could be considered as a primary index for predicting lean meat yield, and the minimal back-fat thickness of 21-30 mm is required to improve the overall acceptability of pork meat.
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Affiliation(s)
- Van-Ba Hoa
- National Institute of Animal Science, Rural Development Administration, Wanju, Korea
| | - Hyun-Woo Seo
- National Institute of Animal Science, Rural Development Administration, Wanju, Korea
| | - Pil-Nam Seong
- National Institute of Animal Science, Rural Development Administration, Wanju, Korea
| | - Soo-Hyun Cho
- National Institute of Animal Science, Rural Development Administration, Wanju, Korea
| | - Sun-Moon Kang
- National Institute of Animal Science, Rural Development Administration, Wanju, Korea
| | - Yun-Seok Kim
- National Institute of Animal Science, Rural Development Administration, Wanju, Korea
| | | | - Yong-Min Choi
- National Institute of Agricultural Sciences, RDA, Wanju, Korea
| | - Jin-Hyoung Kim
- National Institute of Animal Science, Rural Development Administration, Wanju, Korea
| | - Kuk-Hwan Seol
- National Institute of Animal Science, Rural Development Administration, Wanju, Korea
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