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Corthésy N, Antcliffe JB, Saleh F. Taxon-specific redox conditions control fossilisation pathways. Nat Commun 2025; 16:3993. [PMID: 40295563 PMCID: PMC12038014 DOI: 10.1038/s41467-025-59372-3] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/31/2025] [Accepted: 04/21/2025] [Indexed: 04/30/2025] Open
Abstract
The preservation of fossils in the rock record depends on complex redox processes. Redox conditions around different decaying organisms have rarely been monitored in the context of experimental taphonomy. Here, microsensors were used to measure redox changes around decomposing carcasses of various taxa, including shrimp, snail, starfish, and planarian. Our results show that different decaying taxa lead to various post-mortem environmental redox conditions. Large carcasses tend to reach reducing conditions more rapidly than smaller ones. However, size does not explain all observed patterns, as environmental redox conditions are also influenced by the nature of the organic material. For instance, taxa with higher proteins-to-lipids and (proteins + carbohydrates)-to-lipids ratios tend to achieve reducing conditions more rapidly than others. The generation of distinct redox environments around different taxa originally put under the same original environmental conditions suggests that various fossilisation patterns of macrofossils and molecules can co-occur within a single sedimentary layer.
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Affiliation(s)
- Nora Corthésy
- Institute of Earth Sciences, University of Lausanne, Géopolis, Lausanne, Switzerland.
| | - Jonathan B Antcliffe
- Institute of Earth Sciences, University of Lausanne, Géopolis, Lausanne, Switzerland
| | - Farid Saleh
- Institute of Earth Sciences, University of Lausanne, Géopolis, Lausanne, Switzerland.
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2
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Saleh F, Antcliffe JB, Birolini E, Candela Y, Corthésy N, Daley AC, Dupichaud C, Gibert C, Guenser P, Laibl L, Lefebvre B, Michel S, Potin GJM. Highly resolved taphonomic variations within the Early Ordovician Fezouata Biota. Sci Rep 2024; 14:20807. [PMID: 39242693 PMCID: PMC11379804 DOI: 10.1038/s41598-024-71622-w] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/21/2024] [Accepted: 08/29/2024] [Indexed: 09/09/2024] Open
Abstract
The Fezouata Biota (Morocco) is a Burgess Shale-type (BST) assemblage that provides a wealth of information on Early Ordovician ecosystems. Much work has been done to compare the preservation of the Fezouata Biota to other BSTs. However, studies investigating preservation variations within the Fezouata Biota are rare. Here, we use probabilities to investigate the preservation of various ecological categories of Fezouata eumetazoans. Complex taphonomic processes and phylum-specific constraints have led to the better preservation of predators/scavengers in this biota. However, no differences in preservation are observed between vagile and sessile taxa. Importantly, Tremadocian taxa are better preserved than Floian ones. As such, this study highlights the gradual closure of the BST window of preservation in the Zagora region of Morocco and constitutes a benchmark for future palaeoecological and evolutionary studies on the Fezouata Biota.
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Affiliation(s)
- Farid Saleh
- Institute of Earth Sciences, University of Lausanne, Géopolis, 1015, Lausanne, Switzerland.
| | - Jonathan B Antcliffe
- Institute of Earth Sciences, University of Lausanne, Géopolis, 1015, Lausanne, Switzerland
| | - Enzo Birolini
- Université Claude Bernard Lyon 1, École Normale Supérieure de Lyon, CNRS, UMR5276 LGL‑TPE, Villeurbanne, France
| | - Yves Candela
- Department of Natural Sciences, National Museums Scotland, Edinburgh, EH1 1JF, UK
| | - Nora Corthésy
- Institute of Earth Sciences, University of Lausanne, Géopolis, 1015, Lausanne, Switzerland
| | - Allison C Daley
- Institute of Earth Sciences, University of Lausanne, Géopolis, 1015, Lausanne, Switzerland
| | - Christophe Dupichaud
- Université Claude Bernard Lyon 1, École Normale Supérieure de Lyon, CNRS, UMR5276 LGL‑TPE, Villeurbanne, France
| | - Corentin Gibert
- Spatial Ecology and Paleontology Laboratory (SEPL), School of Biological Sciences, Georgia Institute of Technology, Atlanta, GA, USA
| | - Pauline Guenser
- Université Claude Bernard Lyon 1, École Normale Supérieure de Lyon, CNRS, UMR5276 LGL‑TPE, Villeurbanne, France
| | - Lukáš Laibl
- Czech Academy of Sciences, Institute of Geology, Rozvojová 269, 165 00, Prague 6, Czech Republic
| | - Bertrand Lefebvre
- Université Claude Bernard Lyon 1, École Normale Supérieure de Lyon, CNRS, UMR5276 LGL‑TPE, Villeurbanne, France
| | - Soline Michel
- Université Claude Bernard Lyon 1, École Normale Supérieure de Lyon, CNRS, UMR5276 LGL‑TPE, Villeurbanne, France
| | - Gaëtan J-M Potin
- Institute of Earth Sciences, University of Lausanne, Géopolis, 1015, Lausanne, Switzerland
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Corthésy N, Saleh F, Thomas C, Antcliffe JB, Daley AC. The effects of clays on bacterial community composition during arthropod decay. SWISS JOURNAL OF PALAEONTOLOGY 2024; 143:26. [PMID: 39006952 PMCID: PMC11236854 DOI: 10.1186/s13358-024-00324-7] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 02/14/2024] [Accepted: 06/18/2024] [Indexed: 07/16/2024]
Abstract
Fossilization, or the transition of an organism from the biosphere to the geosphere, is a complex mechanism involving numerous biological and geological variables. Bacteria are one of the most significant biotic players to decompose organic matter in natural environments, early on during fossilization. However, bacterial processes are difficult to characterize as many different abiotic conditions can influence bacterial efficiency in degrading tissues. One potentially important variable is the composition and nature of the sediment on which a carcass is deposited after death. We experimentally examined this by decaying the marine shrimp Palaemon varians underwater on three different clay sediments. Samples were then analyzed using 16S ribosomal RNA sequencing to identify the bacterial communities associated with each clay system. Results show that samples decaying on the surface of kaolinite have a lower bacterial diversity than those decaying on the surface of bentonite and montmorillonite, which could explain the limited decay of carcasses deposited on this clay. However, this is not the only role played by kaolinite, as a greater proportion of gram-negative over gram-positive bacteria is observed in this system. Gram-positive bacteria are generally thought to be more efficient at recycling complex polysaccharides such as those forming the body walls of arthropods. This is the first experimental evidence of sediments shaping an entire bacterial community. Such interaction between sediments and bacteria might have contributed to arthropods' exquisite preservation and prevalence in kaolinite-rich Lagerstätten of the Cambrian Explosion. Supplementary Information The online version contains supplementary material available at 10.1186/s13358-024-00324-7.
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Affiliation(s)
- Nora Corthésy
- Institute of Earth Sciences, University of Lausanne, Géopolis, 1015 Lausanne, Switzerland
| | - Farid Saleh
- Institute of Earth Sciences, University of Lausanne, Géopolis, 1015 Lausanne, Switzerland
| | - Camille Thomas
- Institute of Geological Sciences, Oeschger Centre for Climate Research, University of Bern, Baltzerstrasse 1+3, 3012 Bern, Switzerland
- Department of Earth Sciences, University of Geneva, rue des Maraichers 13, 1205 Geneva, Switzerland
| | - Jonathan B Antcliffe
- Institute of Earth Sciences, University of Lausanne, Géopolis, 1015 Lausanne, Switzerland
| | - Allison C Daley
- Institute of Earth Sciences, University of Lausanne, Géopolis, 1015 Lausanne, Switzerland
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Jin C, Chen H, Mai H, Hou X, Yang X, Zhai D. Discovery of diverse Pectocaris species at the Cambrian series 2 Hongjingshao formation Xiazhuang section (Kunming, SW China) and its ecological, taphonomic, and biostratigraphic implications. PeerJ 2024; 12:e17230. [PMID: 38638159 PMCID: PMC11025544 DOI: 10.7717/peerj.17230] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/29/2023] [Accepted: 03/21/2024] [Indexed: 04/20/2024] Open
Abstract
Pectocaris species are intermediate- to large-sized Cambrian bivalved arthropods. Previous studies have documented Pectocaris exclusively from the Cambrian Series 2 Stage 3 Chengjiang biota in Yu'anshan Formation, Chiungchussu Stage in SW China. In this study, we report Pectocaris paraspatiosa sp. nov., and three other previously known Pectocaris from the Xiazhuang section in Kunming, which belongs to the Hongjingshao Formation and is a later phase within Cambrian Stage 3 than the Yu'anshan Formation. The new species can be distinguished from its congeners by the sparsely arranged endopodal endites and the morphologies of the abdomen, telson, and telson processes. We interpret P. paraspatiosa sp. nov. as a filter-feeder and a powerful swimmer adapted to shallow, agitated environments. Comparison among the Pectocaris species reinforces previous views that niche differentiation had been established among the congeneric species based on morphological differentiation. Our study shows the comprehensive occurrences of Pectocaris species outside the Chengjiang biota for the first time. With a review of the shared fossil taxa of Chengjiang and Xiaoshiba biotas, we identify a strong biological connection between the Yu'anshan and Hongjingshao Formations.
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Affiliation(s)
- Changfei Jin
- Yunnan Key Laboratory for Palaeobiology, Institute of Palaeontology, Yunnan University, Kunming, China
- MEC International Joint Laboratory for Palaeobiology and Palaeoenvironment, Yunnan University, Kunming, China
| | - Hong Chen
- School of Biological Sciences and Technology, Liupanshui Normal University, Liupanshui, China
| | - Huijuan Mai
- Yunnan Key Laboratory for Palaeobiology, Institute of Palaeontology, Yunnan University, Kunming, China
- MEC International Joint Laboratory for Palaeobiology and Palaeoenvironment, Yunnan University, Kunming, China
| | - Xianguang Hou
- Yunnan Key Laboratory for Palaeobiology, Institute of Palaeontology, Yunnan University, Kunming, China
- MEC International Joint Laboratory for Palaeobiology and Palaeoenvironment, Yunnan University, Kunming, China
| | - Xianfeng Yang
- Yunnan Key Laboratory for Palaeobiology, Institute of Palaeontology, Yunnan University, Kunming, China
- MEC International Joint Laboratory for Palaeobiology and Palaeoenvironment, Yunnan University, Kunming, China
| | - Dayou Zhai
- Yunnan Key Laboratory for Palaeobiology, Institute of Palaeontology, Yunnan University, Kunming, China
- MEC International Joint Laboratory for Palaeobiology and Palaeoenvironment, Yunnan University, Kunming, China
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Saleh F, Lustri L, Gueriau P, Potin GJM, Pérez-Peris F, Laibl L, Jamart V, Vite A, Antcliffe JB, Daley AC, Nohejlová M, Dupichaud C, Schöder S, Bérard E, Lynch S, Drage HB, Vaucher R, Vidal M, Monceret E, Monceret S, Lefebvre B. The Cabrières Biota (France) provides insights into Ordovician polar ecosystems. Nat Ecol Evol 2024; 8:651-662. [PMID: 38337049 PMCID: PMC11009115 DOI: 10.1038/s41559-024-02331-w] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/11/2023] [Accepted: 01/10/2024] [Indexed: 02/12/2024]
Abstract
Early Palaeozoic sites with soft-tissue preservation are predominantly found in Cambrian rocks and tend to capture past tropical and temperate ecosystems. In this study, we describe the diversity and preservation of the Cabrières Biota, a newly discovered Early Ordovician Lagerstätte from Montagne Noire, southern France. The Cabrières Biota showcases a diverse polar assemblage of both biomineralized and soft-bodied organisms predominantly preserved in iron oxides. Echinoderms are extremely scarce, while sponges and algae are abundantly represented. Non-biomineralized arthropod fragments are also preserved, along with faunal elements reminiscent of Cambrian Burgess Shale-type ecosystems, such as armoured lobopodians. The taxonomic diversity observed in the Cabrières Biota mixes Early Ordovician Lagerstätten taxa with Cambrian forms. By potentially being the closest Lagerstätte to the South Pole, the Cabrières Biota probably served as a biotic refuge amid the high-water temperatures of the Early Ordovician, and shows comparable ecological structuring to modern polar communities.
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Affiliation(s)
- Farid Saleh
- Institute of Earth Sciences, University of Lausanne, Lausanne, Switzerland.
| | - Lorenzo Lustri
- Institute of Earth Sciences, University of Lausanne, Lausanne, Switzerland
| | - Pierre Gueriau
- Institute of Earth Sciences, University of Lausanne, Lausanne, Switzerland
- Université Paris-Saclay, CNRS, ministère de la Culture, UVSQ, MNHN, Institut photonique d'analyse non-destructive européen des matériaux anciens, Saint-Aubin, France
| | - Gaëtan J-M Potin
- Institute of Earth Sciences, University of Lausanne, Lausanne, Switzerland
| | - Francesc Pérez-Peris
- Institute of Earth Sciences, University of Lausanne, Lausanne, Switzerland
- Department of Earth and Environmental Sciences, University of Iowa, Iowa City, IA, USA
| | - Lukáš Laibl
- Czech Academy of Sciences, Institute of Geology, Prague, Czech Republic
| | - Valentin Jamart
- Institute of Earth Sciences, University of Lausanne, Lausanne, Switzerland
| | - Antoine Vite
- Institute of Earth Sciences, University of Lausanne, Lausanne, Switzerland
- Université de Lyon, Université Claude Bernard Lyon 1, École Normale Supérieure de Lyon, CNRS, UMR5276, LGL-TPE, Villeurbanne, France
| | | | - Allison C Daley
- Institute of Earth Sciences, University of Lausanne, Lausanne, Switzerland
| | | | - Christophe Dupichaud
- Université de Lyon, Université Claude Bernard Lyon 1, École Normale Supérieure de Lyon, CNRS, UMR5276, LGL-TPE, Villeurbanne, France
| | | | - Emilie Bérard
- Synchrotron SOLEIL, L'Orme des merisiers, Gif-sur-Yvette, France
| | - Sinéad Lynch
- Institute of Earth Sciences, University of Lausanne, Lausanne, Switzerland
| | - Harriet B Drage
- Institute of Earth Sciences, University of Lausanne, Lausanne, Switzerland
| | - Romain Vaucher
- Institute of Earth Sciences, University of Lausanne, Lausanne, Switzerland
- Department of Earth Sciences, University of Geneva, Geneva, Switzerland
| | - Muriel Vidal
- Univ Brest, CNRS, Ifremer, Geo-Ocean, UMR 6538, Plouzané, France
| | - Eric Monceret
- Société d'Etudes Scientifiques de l'Aude, Carcassonne, France
| | - Sylvie Monceret
- Société d'Etudes Scientifiques de l'Aude, Carcassonne, France
| | - Bertrand Lefebvre
- Université de Lyon, Université Claude Bernard Lyon 1, École Normale Supérieure de Lyon, CNRS, UMR5276, LGL-TPE, Villeurbanne, France
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Saleh F, Clements T, Perrier V, Daley AC, Antcliffe JB. Variations in preservation of exceptional fossils within concretions. SWISS JOURNAL OF PALAEONTOLOGY 2023; 142:20. [PMID: 37719137 PMCID: PMC10501951 DOI: 10.1186/s13358-023-00284-4] [Citation(s) in RCA: 2] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 05/23/2023] [Accepted: 08/13/2023] [Indexed: 09/19/2023]
Abstract
Concretions are an interesting mode of preservation that can occasionally yield fossils with soft tissues. To properly interpret these fossils, an understanding of their fossilization is required. Probabilistic models are useful tools to identify variations between different Konservat-Lagerstätten that are separated spatially and temporally. However, the application of probabilistic modeling has been limited to Early Paleozoic Konservat-Lagerstätten preserved in shales. In this paper, the patterns of preservation of three concretionary Konservat-Lagerstätten-the Carboniferous Mazon Creek (USA) and Montceau-les-Mines (France), and the Silurian Herefordshire Lagerstätte (UK)-are analyzed using a statistical approach. It is demonstrated that the degree of biotic involvement, i.e., the degree to which a carcass dictates its own preservation, is connected to internal organ conditional probabilities-the probabilities of finding an internal organ associated with another structure such as biomineralized, sclerotized, cuticularized, or cellular body walls. In concretions that are externally forced with little biological mediation (e.g., Herefordshire), all internal organ conditional probabilities are uniform. As biological mediation in concretion formation becomes more pronounced, heterogeneities in conditional probabilities are introduced (e.g., Montceau-les-Mines and Mazon Creek). The three concretionary sites were also compared with previously investigated Konservat-Lagerstätten preserving fossils in shales to demonstrate how the developed probability framework aids in understanding the broad-scale functioning of preservation in Konservat-Lagerstätten. Supplementary Information The online version contains supplementary material available at 10.1186/s13358-023-00284-4.
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Affiliation(s)
- Farid Saleh
- Institute of Earth Sciences (ISTE), University of Lausanne, Geopolis, CH-1015 Lausanne, Switzerland
| | - Thomas Clements
- GeoZentrum Nordbayern, Friedrich-Alexander Universität Erlangen-Nürnberg, Loewenichstrasse 28, 91054 Erlangen, Germany
| | - Vincent Perrier
- Université de Lyon, UCBL, ENSL, CNRS, UMR 5276 LGL-TPE, 69622 Villeurbanne, France
| | - Allison C Daley
- Institute of Earth Sciences (ISTE), University of Lausanne, Geopolis, CH-1015 Lausanne, Switzerland
| | - Jonathan B Antcliffe
- Institute of Earth Sciences (ISTE), University of Lausanne, Geopolis, CH-1015 Lausanne, Switzerland
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Saleh F, Vaucher R, Vidal M, Hariri KE, Laibl L, Daley AC, Gutiérrez-Marco JC, Candela Y, Harper DAT, Ortega-Hernández J, Ma X, Rida A, Vizcaïno D, Lefebvre B. New fossil assemblages from the Early Ordovician Fezouata Biota. Sci Rep 2022; 12:20773. [PMID: 36513689 PMCID: PMC9747710 DOI: 10.1038/s41598-022-25000-z] [Citation(s) in RCA: 3] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/11/2022] [Accepted: 11/23/2022] [Indexed: 12/15/2022] Open
Abstract
The Fezouata Biota (Morocco) is a unique Early Ordovician fossil assemblage. The discovery of this biota revolutionized our understanding of Earth's early animal diversifications-the Cambrian Explosion and the Ordovician Radiation-by suggesting an evolutionary continuum between both events. Herein, we describe Taichoute, a new fossil locality from the Fezouata Shale. This locality extends the temporal distribution of fossil preservation from this formation into the upper Floian, while also expanding the range of depositional environments to more distal parts of the shelf. In Taichoute, most animals were transported by density flows, unlike the in-situ preservation of animals recovered in previously investigated Fezouata sites. Taichoute is dominated by three-dimensionally preserved, and heavily sclerotized fragments of large euarthropods-possibly representing nektobenthic/nektic bivalved taxa and/or hurdiid radiodonts. Resolving whether this dominance reflects a legitimate aspect of the original ecosystem or a preservational bias requires an in-depth assessment of the environmental conditions at this site. Nevertheless, Taichoute provides novel preservational and palaeontological insights during a key evolutionary transition in the history of life on Earth.
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Affiliation(s)
- Farid Saleh
- grid.9851.50000 0001 2165 4204Institute of Earth Sciences (ISTE), University of Lausanne, Geopolis, 1015 Lausanne, Switzerland ,grid.440773.30000 0000 9342 2456Yunnan Key Laboratory for Palaeobiology, Institute of Palaeontology, Yunnan University, Kunming, China ,grid.440773.30000 0000 9342 2456MEC International Joint Laboratory for Palaeobiology and Palaeoenvironment, Institute of Palaeontology, Yunnan University, Kunming, China
| | - Romain Vaucher
- grid.9851.50000 0001 2165 4204Institute of Earth Sciences (ISTE), University of Lausanne, Geopolis, 1015 Lausanne, Switzerland
| | - Muriel Vidal
- Univ Brest, CNRS, Ifremer, Geo-Ocean, UMR 6538, Place Nicolas Copernic, F-29280 Plouzané, France
| | - Khadija El Hariri
- grid.411840.80000 0001 0664 9298Laboratoire de Géoressources, Géoenvironnement Et Génie Civil ‘L3G’, Faculté Des Sciences Et Techniques, Université Cadi-Ayyad, BP 549, 40000 Marrakesh, Morocco
| | - Lukáš Laibl
- grid.447909.70000 0001 2220 6788Czech Academy of Sciences, Institute of Geology, Rozvojová 269, 165 00 Prague 6, Czech Republic
| | - Allison C. Daley
- grid.9851.50000 0001 2165 4204Institute of Earth Sciences (ISTE), University of Lausanne, Geopolis, 1015 Lausanne, Switzerland
| | - Juan Carlos Gutiérrez-Marco
- grid.4711.30000 0001 2183 4846Instituto de Geociencias (CSIC, UCM), Departamento GEODESPAL, Facultad de Ciencias Geológicas, Spanish Research Council, José Antonio Novais 12, 28040 Madrid, Spain
| | - Yves Candela
- grid.422302.50000 0001 0943 6159Department of Natural Sciences, National Museums Scotland, Edinburgh, EH1 1JF UK
| | - David A. T. Harper
- grid.8250.f0000 0000 8700 0572Palaeoecosystems Group, Department of Earth Sciences, Durham University, Durham, DH1 3LE UK
| | - Javier Ortega-Hernández
- grid.38142.3c000000041936754XMuseum of Comparative Zoology and Department of Organismic and Evolutionary Biology, Harvard University, Cambridge, MA 02138 USA
| | - Xiaoya Ma
- grid.440773.30000 0000 9342 2456Yunnan Key Laboratory for Palaeobiology, Institute of Palaeontology, Yunnan University, Kunming, China ,grid.440773.30000 0000 9342 2456MEC International Joint Laboratory for Palaeobiology and Palaeoenvironment, Institute of Palaeontology, Yunnan University, Kunming, China ,grid.8391.30000 0004 1936 8024Centre for Ecology and Conservation, University of Exeter, Penryn, UK
| | - Ariba Rida
- grid.411840.80000 0001 0664 9298Université Cadi Ayyad, École Normale Supérieure, Marrakech, Morocco
| | - Daniel Vizcaïno
- Independent, 7 rue Chardin, Maquens, 11090 Carcassonne, France
| | - Bertrand Lefebvre
- grid.7849.20000 0001 2150 7757Université Claude Bernard Lyon 1, École Normale Supérieure de Lyon, CNRS, UMR5276, LGL-TPE, Université de Lyon, Villeurbanne, France
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