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Nakajima S, Sumida H, Endo T, Kimura Y. Study on the Translational Diffusion of Transient Species in 1-Alkyl-3-methylimidazolium-Based Ionic Liquids by Transient Grating Spectroscopy. BCSJ 2022. [DOI: 10.1246/bcsj.20220099] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 11/12/2022]
Affiliation(s)
- Satoshi Nakajima
- Department of Applied Chemistry, Graduate School of Science and Engineering, Doshisha University, 1-3 Tatara Miyakodani, Kyotanabe, Kyoto 610-0321, Japan
| | - Hiroki Sumida
- Department of Applied Chemistry, Graduate School of Science and Engineering, Doshisha University, 1-3 Tatara Miyakodani, Kyotanabe, Kyoto 610-0321, Japan
| | - Takatsugu Endo
- Division of Molecular Chemistry and Biochemistry, Faculty of Science and Engineering, Doshisha University, 1-3 Tatara Miyakodani, Kyotanabe, Kyoto 610-0321, Japan
| | - Yoshifumi Kimura
- Department of Applied Chemistry, Graduate School of Science and Engineering, Doshisha University, 1-3 Tatara Miyakodani, Kyotanabe, Kyoto 610-0321, Japan
- Division of Molecular Chemistry and Biochemistry, Faculty of Science and Engineering, Doshisha University, 1-3 Tatara Miyakodani, Kyotanabe, Kyoto 610-0321, Japan
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González‐Gallardo N, Saavedra B, Guillena G, Ramón DJ. Indium‐mediated allylation of carbonyl compounds in deep eutectic solvents. Appl Organomet Chem 2021. [DOI: 10.1002/aoc.6418] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/12/2022]
Affiliation(s)
- Nerea González‐Gallardo
- Departamento de Química Orgánica and Instituto de Síntesis Orgánica (ISO), Facultad de Ciencias Universidad de Alicante Alicante Spain
| | - Beatriz Saavedra
- Departamento de Química Orgánica and Instituto de Síntesis Orgánica (ISO), Facultad de Ciencias Universidad de Alicante Alicante Spain
| | - Gabriela Guillena
- Departamento de Química Orgánica and Instituto de Síntesis Orgánica (ISO), Facultad de Ciencias Universidad de Alicante Alicante Spain
| | - Diego J. Ramón
- Departamento de Química Orgánica and Instituto de Síntesis Orgánica (ISO), Facultad de Ciencias Universidad de Alicante Alicante Spain
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Ingrosso F, Ladanyi BM. Intermolecular Structure and Collective Dynamics of Supercritical Fluoroform Studied by Molecular Dynamics Simulations. J Phys Chem B 2013; 117:654-67. [DOI: 10.1021/jp310246v] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
Affiliation(s)
- Francesca Ingrosso
- Theoretical Chemistry and Biochemistry
Group SRSMC UMR 7565, CNRS − Université de Lorraine, Boulevard des Aiguillettes, BP 70239 54506
Vandoeuvre-lès-Nancy Cedex, France
- CNRS, SRSMC, UMR 7565,
Vandoeuvre-lès-Nancy, F-54506, France
| | - Branka M. Ladanyi
- Department of Chemistry, Colorado State University, Fort Collins, Colorado 80523,
United States
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Affiliation(s)
- T. YAMAGUCHI
- a Department of Chemistry , Graduate School of Science, Kyoto University , Kyoto , 606-8502 , Japan
| | - Y. KIMURA
- a Department of Chemistry , Graduate School of Science, Kyoto University , Kyoto , 606-8502 , Japan
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Nishiyama Y, Fukuda M, Terazima M, Kimura Y. Study of the translational diffusion of the benzophenone ketyl radical in comparison with stable molecules in room temperature ionic liquids by transient grating spectroscopy. J Chem Phys 2008; 128:164514. [DOI: 10.1063/1.2901973] [Citation(s) in RCA: 35] [Impact Index Per Article: 2.2] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/14/2022] Open
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Fujisawa T, Ito T, Terazima M, Kimura Y. Raman Spectroscopic Study of the Solvation of Decafluorobenzophenone Ketyl Radical and Related Compounds in 2-Propanol at Ambient to Supercritical Temperatures. J Phys Chem A 2008; 112:1914-21. [DOI: 10.1021/jp077245j] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
Affiliation(s)
- Tomotsumi Fujisawa
- Department of Chemistry, Graduate School of Science, Kyoto University, Kyoto, 606-8502, Japan, and Division of Research Initiative, International Innovation Center, Kyoto University, Kyoto, 606-8501, Japan
| | - Takanori Ito
- Department of Chemistry, Graduate School of Science, Kyoto University, Kyoto, 606-8502, Japan, and Division of Research Initiative, International Innovation Center, Kyoto University, Kyoto, 606-8501, Japan
| | - Masahide Terazima
- Department of Chemistry, Graduate School of Science, Kyoto University, Kyoto, 606-8502, Japan, and Division of Research Initiative, International Innovation Center, Kyoto University, Kyoto, 606-8501, Japan
| | - Yoshifumi Kimura
- Department of Chemistry, Graduate School of Science, Kyoto University, Kyoto, 606-8502, Japan, and Division of Research Initiative, International Innovation Center, Kyoto University, Kyoto, 606-8501, Japan
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Ibuki K, Ueno M. Application of Fokker-Planck-Kramers equation treatment for short-time dynamics of diffusion-controlled reaction in supercritical Lennard-Jones fluids over a wide density range. J Chem Phys 2006; 124:134506. [PMID: 16613460 DOI: 10.1063/1.2183769] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/25/2022] Open
Abstract
The validity of a Fokker-Planck-Kramers equation (FPKE) treatment of the rate of diffusion-controlled reaction at short times [K. Ibuki and M. Ueno, J. Chem. Phys. 119, 7054 (2003)] is tested in a supercritical Lennard-Jones fluid over a wide density range by comparing it with the Langevin dynamics and molecular dynamics simulations and other theories. The density n range studied is 0.323n(c)< or =n< or =2.58n(c) and the temperature 1.52T(c), where n(c) and T(c) are the critical density and temperature, respectively. For the rate of bimolecular reactions, the transition between the collision-limited and diffusion-limited regimes is expected to take place in this density range. The simulations show that the rate constant decays with time extensively at high densities, and that the magnitude of decay decreases gradually with decreasing density. The decay profiles of the rate constants obtained by the simulations are reproduced reasonably well by the FPKE treatment in the whole density range studied if a continuous velocity distribution is used in solving the FPKE approximately. If a discontinuous velocity distribution is used instead of the continuous one, the FPKE treatment leads to a rate constant much larger than the simulation results at medium and low densities. The rate constants calculated from the Smoluchowski-Collins-Kimball (SCK) theory based on the diffusion equation are somewhat smaller than the simulation results in medium and low densities when the intrinsic rate constant is chosen to adjust the steady state rate constant in the low density limit to that derived by the kinetic collision theory. The discrepancy is relatively small, so that the SCK theory provides a useful guideline for a qualitative discussion of the density effect on the rate constant.
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Affiliation(s)
- Kazuyasu Ibuki
- Department of Molecular Science and Technology, Faculty of Engineering, Doshisha University, Kyo-Tanabe, Kyoto 610-0321, Japan.
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Abstract
We present here the results of molecular-dynamics simulation of solvation dynamics in supercritical CO(2) at a temperature of about 1.05T(c), where T(c) is the critical temperature, and at a series of densities ranging from 0.4 to 2.0 of the critical density rho(c). We focus on electrostatic solvation dynamics, representing the electronic excitation of the chromophore as a change in its charge distribution from a quadrupolar-symmetry ground state to a dipolar excited state. Two perturbations are considered, corresponding to different magnitudes of solute excited-state dipoles, denoted as d5 and d8. The d8 solute is more attractive, leading to a larger enhancement in CO(2) clustering upon solute electronic excitation. This has a large impact on solvation dynamics, especially at densities below rho(c). At these densities, solvation dynamics is much slower for the d8 than for the d5 solute. For both solutes, solvation dynamics becomes faster at densities above rho(c) at which solvent clustering diminishes. We show that the slowest solvation time scale is associated with solvent clustering and we relate it to solute-solvent mutual translational diffusion and the extent of change in effective local density resulting from solute electronic excitation.
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Affiliation(s)
- Branka M Ladanyi
- Department of Chemistry, Colorado State University, Fort Collins, Colorado 80523, USA.
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Forbes MDE, Dukes KE, Avdievich NI, Harbron EJ, DeSimone JM. Flexible Biradicals in Liquid and Supercritical Carbon Dioxide: The Exchange Interaction, the Chain Dynamics, and a Comparison with Conventional Solvents. J Phys Chem A 2006; 110:1767-74. [PMID: 16451006 DOI: 10.1021/jp053183q] [Citation(s) in RCA: 6] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/30/2022]
Abstract
X-band time-resolved electron paramagnetic resonance (TREPR) spectra of three flexible biradicals of varying chain length and structure were obtained in liquid and supercritical carbon dioxide (CO2) solutions and compared to conventional solvents. For C16 acyl-alkyl biradical 1a, an average spin exchange interaction between the radical centers, J(avg), was obtained by spectral simulation using a simple model for spin-correlated radical pairs (SCRPs) and a small amount of T2 relaxation from a previously established J modulation mechanism. A large solvent effect on J(avg) was observed for the first time, varying by almost 1 order of magnitude from CO2 (J(avg) = -120 +/- 10 MHz) to heavy mineral oil (-11 +/- 3 MHz) for 1a. For C15 bis(alkyl) biradical 1b, spectra obtained under supercritical conditions are only slightly different from those detected in liquid CO2 but differ from spectra taken in benzene. For C10 acyl-alkyl biradical 2a, more emissive spin polarization due to S-T- mixing is observed in CO2 than in benzene. These results are discussed in terms of solvent properties such as dielectric constant, viscosity, and specific interactions. Both chain dynamics and changes to the equilibrium distribution of end-to-end distances can alter J(avg) and the observed ratio of S-T0 to S-T- mixing; however, faster chain dynamics is concluded to be the most likely cause of the observed effects in these systems.
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Affiliation(s)
- Malcolm D E Forbes
- Department of Chemistry, CB No. 3290, University of North Carolina, Chapel Hill, North Carolina 27599, USA.
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Abstract
For revealing spectrally silent dynamics in chemical reactions, a new method, the time-dependent diffusion coefficient, is presented. Principles and typical examples of this method, in particular applications to biologically related reactions, are reviewed. The pulsed laser induced transient grating signal of the photo-decomposition reaction of caged ATP showed that the diffusion coefficient increases gradually with time reflecting the molecular size decrease by the dissociation. Hence, this rate should be a direct measurement of the photo-dissociation rate of ATP from the caged state. In an application to a protein folding reaction, the time-development of the diffusion coefficient was observed during the folding reaction. This time dependence was interpreted in terms of the intermolecular interaction change; i.e., conversion from the intermolecular hydrogen bonding to intramolecular one. It was found that the change of the hydrogen bonding network occurred by the two state manner in entire refolding process of cytochrome c. The unique feature of this time-dependent diffusion coefficient method is discussed.
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Affiliation(s)
- Masahide Terazima
- Department of Chemistry, Graduate School of Science, Kyoto University, Japan
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Gensch T, Viappiani C. Time-resolved photothermal methods: accessing time-resolved thermodynamics of photoinduced processes in chemistry and biology. Photochem Photobiol Sci 2003; 2:699-721. [PMID: 12911218 DOI: 10.1039/b303177b] [Citation(s) in RCA: 58] [Impact Index Per Article: 2.8] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
Abstract
Photothermal methods are currently being employed in a variety of research areas, ranging from materials science to environmental monitoring. Despite the common term which they are collected under, the implementations of these techniques are as diverse as the fields of application. In this review, we concentrate on the recent applications of time-resolved methods in photochemistry and photobiology.
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Affiliation(s)
- Thomas Gensch
- Forschungszentrum Jülich, Institut für Biologische Informationsverarbeitung 1, 52425 Jülich, Germany.
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Tachikawa T, Akiyama K, Yokoyama C, Tero-Kubota S. Local density effects on the hyperfine splitting constant and line width of TEMPO radical in gaseous and supercritical carbon dioxide. Chem Phys Lett 2003. [DOI: 10.1016/s0009-2614(03)00995-3] [Citation(s) in RCA: 11] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/15/2022]
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Ohmori T, Kimura Y, Hirota N, Terazima M. Diffusion of Transient Radicals in Alcohols and Cyclohexane from Ambient to Supercritical Conditions Studied by the Transient Grating Method. J Phys Chem B 2003. [DOI: 10.1021/jp034305m] [Citation(s) in RCA: 11] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
Affiliation(s)
- T. Ohmori
- Department of Chemistry, Graduate School of Science, Kyoto University, Kyoto, 606-8502 Japan, and Division of Research Initiatives, International Innovation Center, Kyoto University, Kyoto, 606-8501 Japan
| | - Y. Kimura
- Department of Chemistry, Graduate School of Science, Kyoto University, Kyoto, 606-8502 Japan, and Division of Research Initiatives, International Innovation Center, Kyoto University, Kyoto, 606-8501 Japan
| | - N. Hirota
- Department of Chemistry, Graduate School of Science, Kyoto University, Kyoto, 606-8502 Japan, and Division of Research Initiatives, International Innovation Center, Kyoto University, Kyoto, 606-8501 Japan
| | - M. Terazima
- Department of Chemistry, Graduate School of Science, Kyoto University, Kyoto, 606-8502 Japan, and Division of Research Initiatives, International Innovation Center, Kyoto University, Kyoto, 606-8501 Japan
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Affiliation(s)
- Toshihiko Arita
- Kyoto University, Graduate School of Science, Department of Chemistry, Kitashirakawa-Oiwakecho, Sakyo-Ku, Kyoto, 606-8502, Japan
| | - Okitsugu Kajimoto
- Kyoto University, Graduate School of Science, Department of Chemistry, Kitashirakawa-Oiwakecho, Sakyo-Ku, Kyoto, 606-8502, Japan
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Affiliation(s)
- Kengo Itoh
- Department of Pure and Applied Science, University of Tokyo, Tokyo 153-8902, Japan
| | - Richard A. Holroyd
- Chemistry Department, Brookhaven National Laboratory, Upton, New York 11973
| | - Masaru Nishikawa
- Faculty of Engineering, Kanagawa Institute of Technology, 1030 Shimo-Ogino, Astugi 243-0292, Japan
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Abstract
The translational diffusion of photochemically created intermediate radicals is measured by the transient grating technique. The diffusional behavior of these intermediates is different from that of stable molecules, which have already been investigated extensively. The investigation of the diffusion of these species will provide an opportunity to reveal the unique intermolecular interaction between the intermediates and matrix. This information will be valuable for understanding photochemistry in solutions.
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Affiliation(s)
- M Terazima
- Department of Chemistry, Graduate School of Science, Kyoto University, Kyoto, 606-8502, Japan.
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Ukai A, Hirota N, Terazima M. Diffusion of Organic Molecules in the Excited Triplet States Detected by the Transient Grating with a High Wavenumber. J Phys Chem A 2000. [DOI: 10.1021/jp0002547] [Citation(s) in RCA: 11] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/30/2022]
Affiliation(s)
- Akihiro Ukai
- Department of Chemistry, Graduate School of Science, Kyoto University, Kyoto 606-8502, Japan
| | - Noboru Hirota
- Department of Chemistry, Graduate School of Science, Kyoto University, Kyoto 606-8502, Japan
| | - Masahide Terazima
- Department of Chemistry, Graduate School of Science, Kyoto University, Kyoto 606-8502, Japan
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Affiliation(s)
| | - Kenji Takahashi
- Chemistry Division, Argonne National Laboratory, Argonne, Illinois 60439
| | - David M. Bartels
- Chemistry Division, Argonne National Laboratory, Argonne, Illinois 60439
| | - Charles D. Jonah
- Chemistry Division, Argonne National Laboratory, Argonne, Illinois 60439
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Takahashi K, Sawamura S, Jonah CD. Solvent reorganization energies measured by an electron transfer reaction in supercritical ethane. J Supercrit Fluids 1998. [DOI: 10.1016/s0896-8446(98)00047-3] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.1] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
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Kimura Y, Sugihara K, Terazima M, Hirota N. Study on the Photolysis Quantum Yield of Diphenyl Disulfide by the Transient Grating Method. BCSJ 1997. [DOI: 10.1246/bcsj.70.2657] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.1] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 11/12/2022]
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