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Khan A, Singh AV, Gautam SS, Agarwal A, Punetha A, Upadhayay VK, Kukreti B, Bundela V, Jugran AK, Goel R. Microbial bioformulation: a microbial assisted biostimulating fertilization technique for sustainable agriculture. Front Plant Sci 2023; 14:1270039. [PMID: 38148858 PMCID: PMC10749938 DOI: 10.3389/fpls.2023.1270039] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 07/31/2023] [Accepted: 11/03/2023] [Indexed: 12/28/2023]
Abstract
Addressing the pressing issues of increased food demand, declining crop productivity under varying agroclimatic conditions, and the deteriorating soil health resulting from the overuse of agricultural chemicals, requires innovative and effective strategies for the present era. Microbial bioformulation technology is a revolutionary, and eco-friendly alternative to agrochemicals that paves the way for sustainable agriculture. This technology harnesses the power of potential microbial strains and their cell-free filtrate possessing specific properties, such as phosphorus, potassium, and zinc solubilization, nitrogen fixation, siderophore production, and pathogen protection. The application of microbial bioformulations offers several remarkable advantages, including its sustainable nature, plant probiotic properties, and long-term viability, positioning it as a promising technology for the future of agriculture. To maintain the survival and viability of microbial strains, diverse carrier materials are employed to provide essential nourishment and support. Various carrier materials with their unique pros and cons are available, and choosing the most appropriate one is a key consideration, as it substantially extends the shelf life of microbial cells and maintains the overall quality of the bioinoculants. An exemplary modern bioformulation technology involves immobilizing microbial cells and utilizing cell-free filters to preserve the efficacy of bioinoculants, showcasing cutting-edge progress in this field. Moreover, the effective delivery of bioformulations in agricultural fields is another critical aspect to improve their overall efficiency. Proper and suitable application of microbial formulations is essential to boost soil fertility, preserve the soil's microbial ecology, enhance soil nutrition, and support crop physiological and biochemical processes, leading to increased yields in a sustainable manner while reducing reliance on expensive and toxic agrochemicals. This manuscript centers on exploring microbial bioformulations and their carrier materials, providing insights into the selection criteria, the development process of bioformulations, precautions, and best practices for various agricultural lands. The potential of bioformulations in promoting plant growth and defense against pathogens and diseases, while addressing biosafety concerns, is also a focal point of this study.
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Affiliation(s)
- Amir Khan
- Biofortification Lab, Department of Microbiology, College of Basic Sciences and Humanities, Govind Ballabh Pant University of Agriculture and Technology, U.S. Nagar, Uttarakhand, India
| | - Ajay Veer Singh
- Biofortification Lab, Department of Microbiology, College of Basic Sciences and Humanities, Govind Ballabh Pant University of Agriculture and Technology, U.S. Nagar, Uttarakhand, India
| | - Shiv Shanker Gautam
- Biofortification Lab, Department of Microbiology, College of Basic Sciences and Humanities, Govind Ballabh Pant University of Agriculture and Technology, U.S. Nagar, Uttarakhand, India
| | - Aparna Agarwal
- Biofortification Lab, Department of Microbiology, College of Basic Sciences and Humanities, Govind Ballabh Pant University of Agriculture and Technology, U.S. Nagar, Uttarakhand, India
| | - Arjita Punetha
- School of Environmental Science and Natural Resource, Dehradun, Uttarakhand, India
| | - Viabhav Kumar Upadhayay
- Department of Microbiology, College of Basic Sciences and Humanities, Dr. Rajendra Prasad Central Agriculture University, Samastipur, India
| | - Bharti Kukreti
- Biofortification Lab, Department of Microbiology, College of Basic Sciences and Humanities, Govind Ballabh Pant University of Agriculture and Technology, U.S. Nagar, Uttarakhand, India
| | - Vindhya Bundela
- Biofortification Lab, Department of Microbiology, College of Basic Sciences and Humanities, Govind Ballabh Pant University of Agriculture and Technology, U.S. Nagar, Uttarakhand, India
| | - Arun Kumar Jugran
- G. B. Pant National Institute of Himalayan Environment (GBPNIHE), Garhwal Regional Centre, Srinager, Uttarakhand, India
| | - Reeta Goel
- Department of Biotechnology, Institute of Applied Sciences and Humanities, GLA University, Mathura, Uttar Pradesh, India
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Krebs R, Farrington KE, Johnson GR, Luckarift HR, Diltz RA, Owens JR. Biotechnology to reduce logistics burden and promote environmental stewardship for Air Force civil engineering requirements. Biotechnol Adv 2023; 69:108269. [PMID: 37797730 DOI: 10.1016/j.biotechadv.2023.108269] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/24/2023] [Revised: 08/25/2023] [Accepted: 09/30/2023] [Indexed: 10/07/2023]
Abstract
This review provides discussion of advances in biotechnology with specific application to civil engineering requirements for airfield and airbase operations. The broad objectives are soil stabilization, waste management, and environmental protection. The biotechnology focal areas address (1) treatment of soil and sand by biomineralization and biopolymer addition, (2) reduction of solid organic waste by anaerobic digestion, (3) application of microbes and higher plants for biological processing of contaminated wastewater, and (4) use of indigenous materials for airbase construction and repair. The consideration of these methods in military operating scenarios, including austere environments, involves comparison with conventional techniques. All four focal areas potentially reduce logistics burden, increase environmental sustainability, and may provide energy source, or energy-neutral practices that benefit military operations.
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Affiliation(s)
- Rachel Krebs
- Battelle Memorial Institute, 505 King Avenue, Columbus, OH 43201, USA.
| | - Karen E Farrington
- ARCTOS, LLC, 2601 Mission Point Blvd., Ste. 300, Beavercreek, OH 45431, USA; Air Force Civil Engineer Center, 139 Barnes Drive, Suite #2, Tyndall Air Force Base, FL 32403, USA.
| | - Glenn R Johnson
- Battelle Memorial Institute, 505 King Avenue, Columbus, OH 43201, USA; Air Force Civil Engineer Center, 139 Barnes Drive, Suite #2, Tyndall Air Force Base, FL 32403, USA.
| | - Heather R Luckarift
- Battelle Memorial Institute, 505 King Avenue, Columbus, OH 43201, USA; Air Force Civil Engineer Center, 139 Barnes Drive, Suite #2, Tyndall Air Force Base, FL 32403, USA.
| | - Robert A Diltz
- Air Force Civil Engineer Center, 139 Barnes Drive, Suite #2, Tyndall Air Force Base, FL 32403, USA.
| | - Jeffery R Owens
- Air Force Civil Engineer Center, 139 Barnes Drive, Suite #2, Tyndall Air Force Base, FL 32403, USA.
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Vaskevicius L, Malunavicius V, Jankunec M, Lastauskiene E, Talaikis M, Mikoliunaite L, Maneikis A, Gudiukaite R. Insights in MICP dynamics in urease-positive Staphylococcus sp. H6 and Sporosarcina pasteurii bacterium. Environ Res 2023; 234:116588. [PMID: 37423368 DOI: 10.1016/j.envres.2023.116588] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 04/05/2023] [Revised: 06/22/2023] [Accepted: 07/06/2023] [Indexed: 07/11/2023]
Abstract
Microbially induced calcite precipitation (MICP) is an efficient and eco-friendly technique that has attracted significant interest for resolving various problems in the soil (erosion, improving structural integrity and water retention, etc.), remediation of heavy metals, production of self-healing concrete or restoration of different concrete structures. The success of most common MICP methods depends on microorganisms degrading urea which leads to the formation of CaCO3 crystals. While Sporosarcina pasteurii is a well-known microorganism for MICP, other soil abundant microorganisms, such as Staphylococcus bacteria have not been thoroughly studied for its efficiency in bioconsolidation though MICP is a very important proccess which can ensure soil quality and health. This study aimed to analyze MICP process at the surface level in Sporosarcina pasteurii and a newly screened Staphylococcus sp. H6 bacterium as well as show the possibility of this new microorganism to perform MICP. It was observed that Staphylococcus sp. H6 culture precipitated 157.35 ± 3.3 mM of Ca2+ ions from 200 mM, compared to 176 ± 4.8 mM precipitated by S. pasteurii. The bioconsolidation of sand particles was confirmed by Raman spectroscopy and XRD analysis, which indicated the formation of CaCO3 crystals for both Staphylococcus sp. H6 and S. pasteurii cells. The water-flow test suggested a significant reduction in water permeability in bioconsolidated sand samples for both Staphylococcus sp. H6 and S. pasteurii. Notably, this study provides the first evidence that CaCO3 precipitation occurs on the surface of Staphylococcus and S. pasteurii cells within the initial 15-30 min after exposure to the biocementation solution. Furthermore, Atomic force microscopy (AFM) indicated rapid changes in cell roughness, with bacterial cells becoming completely coated with CaCO3 crystals after 90 min incubation with a biocementation solution. To our knowledge, this is the first time where atomic force microscopy was used to visualize the dynamic of MICP on cell surface.
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Affiliation(s)
- Laurynas Vaskevicius
- Department of Microbiology and Biotechnology, Institute of Biosciences, Life Sciences Center, Vilnius University, Sauletekis Av. 7, LT-10257, Vilnius, Lithuania
| | - Vilius Malunavicius
- Department of Microbiology and Biotechnology, Institute of Biosciences, Life Sciences Center, Vilnius University, Sauletekis Av. 7, LT-10257, Vilnius, Lithuania
| | - Marija Jankunec
- Institute of Biochemistry, Life Sciences Center, Vilnius University, Sauletekis Av. 7, LT-10257, Vilnius, Lithuania
| | - Egle Lastauskiene
- Department of Microbiology and Biotechnology, Institute of Biosciences, Life Sciences Center, Vilnius University, Sauletekis Av. 7, LT-10257, Vilnius, Lithuania
| | - Martynas Talaikis
- Institute of Biochemistry, Life Sciences Center, Vilnius University, Sauletekis Av. 7, LT-10257, Vilnius, Lithuania
| | - Lina Mikoliunaite
- Department of Physical Chemistry, Institute of Chemistry, Faculty of Chemistry and Geosciences, Vilnius University, Naugarduko St. 24, LT-03225, Vilnius, Lithuania; Laboratory of Spectroelectrochemistry, Department of Organic Chemistry, Center for Physical Sciences and Technology, Sauletekis Av. 3, LT-10257, Vilnius, Lithuania
| | - Andrius Maneikis
- Vilnius Gediminas Technical University, Sauletekis Av. 11, LT-10223, Vilnius, Lithuania
| | - Renata Gudiukaite
- Department of Microbiology and Biotechnology, Institute of Biosciences, Life Sciences Center, Vilnius University, Sauletekis Av. 7, LT-10257, Vilnius, Lithuania.
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Armetta F, Cardenas J, Caponetti E, Alduina R, Presentato A, Vecchioni L, di Stefano P, Spinella A, Saladino ML. Conservation state of two paintings in the Santa Margherita cliff cave: role of the environment and of the microbial community. Environ Sci Pollut Res Int 2022; 29:29510-29523. [PMID: 34751880 DOI: 10.1007/s11356-021-17211-0] [Citation(s) in RCA: 4] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 02/15/2021] [Accepted: 10/21/2021] [Indexed: 06/13/2023]
Abstract
The conservation of ancient paintings sited in humid environments is an actual challenge for restorers, because it needs the knowledge of the materials the paintings are made up and of their interaction with a peculiar surrounding environment; thus, tailored procedures and strategies aimed at restoring and preserving paintings are necessary. Santa Margherita's cave in Castellammare del Golfo (Trapani, Italy) is a natural cave, containing the remains of paintings, in a poor state of conservation, belonging to an ancient church dated back to the Middle Age. The present manuscript reports the monitoring of environmental conditions (i.e., temperature and humidity) in a full year, as well as a study on the materials constituting the stone support and the paintings together with a survey of the microbial community. The findings allow us to define the causes that mainly involve the degradation of the paintings. In detail, the degradation of the east and the west walls occurred differently because of the exposure to the sea aerosol, which influenced the salt composition, also contributing to diversifying the bacterial community. Some specific actions to plan the conservation and restoration of paintings and to preserve the site are suggested.
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Affiliation(s)
- Francesco Armetta
- Dipartimento Scienze E Tecnologie Biologiche, Chimiche E Farmaceutiche - STEBICEF, Università Di Palermo, Viale delle Scienze Ed.16 and 17, 90128, Palermo, Italy.
| | - Josue Cardenas
- Dipartimento Scienze E Tecnologie Biologiche, Chimiche E Farmaceutiche - STEBICEF, Università Di Palermo, Viale delle Scienze Ed.16 and 17, 90128, Palermo, Italy
| | - Eugenio Caponetti
- Dipartimento Scienze E Tecnologie Biologiche, Chimiche E Farmaceutiche - STEBICEF, Università Di Palermo, Viale delle Scienze Ed.16 and 17, 90128, Palermo, Italy
- Labor Artis C.R. Diagnostica S.R.L, Via Celona, Palermo, Italy
| | - Rosa Alduina
- Dipartimento Scienze E Tecnologie Biologiche, Chimiche E Farmaceutiche - STEBICEF, Università Di Palermo, Viale delle Scienze Ed.16 and 17, 90128, Palermo, Italy
| | - Alessandro Presentato
- Dipartimento Scienze E Tecnologie Biologiche, Chimiche E Farmaceutiche - STEBICEF, Università Di Palermo, Viale delle Scienze Ed.16 and 17, 90128, Palermo, Italy.
| | - Luca Vecchioni
- Dipartimento Scienze E Tecnologie Biologiche, Chimiche E Farmaceutiche - STEBICEF, Università Di Palermo, Via Archirafi, 18, 90123, Palermo, Italy
| | - Pietro di Stefano
- Dipartimento Scienze Della Terra E del Mare, Università Di Palermo, Via Archirafi, 22, I-90123, Palermo, Italy
| | - Alberto Spinella
- ATeN Center, University of Palermo, Viale delle Scienze Ed.18, 90128, Palermo, Italy
| | - Maria Luisa Saladino
- Dipartimento Scienze E Tecnologie Biologiche, Chimiche E Farmaceutiche - STEBICEF, Università Di Palermo, Viale delle Scienze Ed.16 and 17, 90128, Palermo, Italy
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Wu B, Luo H, Wang X, Liu H, Peng H, Sheng M, Xu F, Xu H. Effects of environmental factors on soil bacterial community structure and diversity in different contaminated districts of Southwest China mine tailings. Sci Total Environ 2022; 802:149899. [PMID: 34464792 DOI: 10.1016/j.scitotenv.2021.149899] [Citation(s) in RCA: 53] [Impact Index Per Article: 26.5] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 04/06/2021] [Revised: 08/10/2021] [Accepted: 08/21/2021] [Indexed: 06/13/2023]
Abstract
A mass of tailings left by mineral exploitation have caused serious environmental pollution. Although many studies have shown that soil microorganisms have the potential to remediate environmental pollution, the interaction mechanism between microorganisms and the surrounding environment of tailings is still unclear. In this study, 15 samples around pyrite mine tailing were collected to explore the ecological effects of environmental factors on bacterial community. The results showed that most of the samples were acidic and contaminated by multiple metals. Cadmium (Cd), copper (Cu), nickel (Ni) migrated and accumulated to into downstream farmlands while chromium (Cr) was the opposite. Proteobacteria, Chloroflex and Actinobacteria were the dominant phyla. Soil pH, total phosphorus (TP), total nitrogen (TN), available potassium (AK), available phosphorus (AP), the bacteria abundance and diversity all gradually increased with the increase of the distance from the tailing. Invertase, acid phosphatase, total organic carbon (TOC), pH, TP and Cr were the main influencing factors to cause the variation of bacterial community. This work could help us to further understand the changes in soil microbial communities around pollution sources.
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Affiliation(s)
- Bohan Wu
- Key Laboratory of Bio-resource and Eco-Environment of Ministry of Education, College of Life Sciences, Sichuan University, Chengdu 610065, Sichuan, PR China
| | - Huanyan Luo
- Key Laboratory of Bio-resource and Eco-Environment of Ministry of Education, College of Life Sciences, Sichuan University, Chengdu 610065, Sichuan, PR China
| | - Xitong Wang
- Key Laboratory of Bio-resource and Eco-Environment of Ministry of Education, College of Life Sciences, Sichuan University, Chengdu 610065, Sichuan, PR China
| | - Huakang Liu
- Key Laboratory of Bio-resource and Eco-Environment of Ministry of Education, College of Life Sciences, Sichuan University, Chengdu 610065, Sichuan, PR China
| | - He Peng
- Key Laboratory of Bio-resource and Eco-Environment of Ministry of Education, College of Life Sciences, Sichuan University, Chengdu 610065, Sichuan, PR China
| | - Mingping Sheng
- Key Laboratory of Bio-resource and Eco-Environment of Ministry of Education, College of Life Sciences, Sichuan University, Chengdu 610065, Sichuan, PR China
| | - Fei Xu
- Key Laboratory of Bio-resource and Eco-Environment of Ministry of Education, College of Life Sciences, Sichuan University, Chengdu 610065, Sichuan, PR China.
| | - Heng Xu
- Key Laboratory of Bio-resource and Eco-Environment of Ministry of Education, College of Life Sciences, Sichuan University, Chengdu 610065, Sichuan, PR China; Key Laboratory of Environment Protection, Soil Ecological Protection and Pollution Control, Sichuan University & Department of Ecology and Environment of Sichuan, Chengdu 610065, Sichuan, PR China.
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Zhu T, Merroun ML, Arhonditsis G, Dittrich M. Attachment on mortar surfaces by cyanobacterium Gloeocapsa PCC 73106 and sequestration of CO 2 by microbially induced calcium carbonate. Microbiologyopen 2021; 10:e1243. [PMID: 34713603 PMCID: PMC8516036 DOI: 10.1002/mbo3.1243] [Citation(s) in RCA: 4] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/21/2021] [Revised: 09/25/2021] [Accepted: 09/27/2021] [Indexed: 11/08/2022] Open
Abstract
Cyanobacterial carbonate precipitation induced by cells and extracellular polymeric substances (EPS) enhances mortar durability. The percentage of cell/EPS attachment regulates the effectiveness of the mortar restoration. This study investigates the cell coverage on mortar and microbially induced carbonate precipitation. Statistical analysis of results from scanning electron and fluorescence microscopy shows that the cell coverage was higher in the presence of UV-killed cells than living cells. Cells are preferably attached to cement paste than sand grains, with a difference of one order of magnitude. The energy-dispersive X-ray spectroscopy analyses and Raman mapping suggest cyanobacteria used atmospheric CO2 to precipitate carbonates.
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Affiliation(s)
- Tingting Zhu
- Biogeochemistry LaboratoryDepartment of Physical and Environmental SciencesUniversity of Toronto ScarboroughTorontoONCanada
- Present address:
Department of Geography, Geomatics and EnvironmentDepartment of Mathematical and Computational SciencesUniversity of Toronto Mississauga3359 Mississauga RdMississaugaOntarioL5L 1C6Canada
| | | | - George Arhonditsis
- Ecological Modelling LaboratoryDepartment of Physical and Environmental SciencesUniversity of Toronto ScarboroughTorontoOntarioCanada
| | - Maria Dittrich
- Biogeochemistry LaboratoryDepartment of Physical and Environmental SciencesUniversity of Toronto ScarboroughTorontoONCanada
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Abstract
The formation and application of ‘cinnamic acid & CaCO3 crystals’ (CACs) induced by a lignin monomer compound.
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Affiliation(s)
- Huifeng Hu
- The Key Laboratory of Advanced Textile Materials and Manufacturing Technology of the Ministry of Education
- College of Materials and Textiles
- Zhejiang Sci-Tech University
- Hangzhou 310018
- China
| | - Yong Zhang
- The Key Laboratory of Advanced Textile Materials and Manufacturing Technology of the Ministry of Education
- College of Materials and Textiles
- Zhejiang Sci-Tech University
- Hangzhou 310018
- China
| | - Xiumei Zhang
- The Key Laboratory of Advanced Textile Materials and Manufacturing Technology of the Ministry of Education
- College of Materials and Textiles
- Zhejiang Sci-Tech University
- Hangzhou 310018
- China
| | - Hridam Deb
- The Key Laboratory of Advanced Textile Materials and Manufacturing Technology of the Ministry of Education
- College of Materials and Textiles
- Zhejiang Sci-Tech University
- Hangzhou 310018
- China
| | - Juming Yao
- The Key Laboratory of Advanced Textile Materials and Manufacturing Technology of the Ministry of Education
- College of Materials and Textiles
- Zhejiang Sci-Tech University
- Hangzhou 310018
- China
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