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Gyllingberg L, Szorkovszky A, Sumpter DJT. Using neuronal models to capture burst-and-glide motion and leadership in fish. J R Soc Interface 2023; 20:20230212. [PMID: 37464800 DOI: 10.1098/rsif.2023.0212] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/13/2023] [Accepted: 06/28/2023] [Indexed: 07/20/2023] Open
Abstract
While mathematical models, in particular self-propelled particle models, capture many properties of large fish schools, they do not always capture the interactions of smaller shoals. Nor do these models tend to account for the use of intermittent locomotion, often referred to as burst-and-glide, by many species. In this paper, we propose a model of social burst-and-glide motion by combining a well-studied model of neuronal dynamics, the FitzHugh-Nagumo model, with a model of fish motion. We first show that our model can capture the motion of a single fish swimming down a channel. Extending to a two-fish model, where visual stimulus of a neighbour affects the internal burst or glide state of the fish, we observe a rich set of dynamics found in many species. These include: leader-follower behaviour; periodic changes in leadership; apparently random (i.e. chaotic) leadership change; and tit-for-tat turn taking. Moreover, unlike previous studies where a randomness is required for leadership switching to occur, we show that this can instead be the result of deterministic interactions. We give several empirically testable predictions for how bursting fish interact and discuss our results in light of recently established correlations between fish locomotion and brain activity.
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Affiliation(s)
| | - Alex Szorkovszky
- RITMO Centre for Interdisciplinary Studies in Rhythm, Time and Motion, University of Oslo, Oslo, Norway
| | - David J T Sumpter
- Department of Information Technology, Uppsala University, Uppsala, Sweden
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Anderson C, Goldsztein G, Fernandez-Nieves A. Ant waves-Spontaneous activity waves in fire-ant columns. Sci Adv 2023; 9:eadd0635. [PMID: 36652514 PMCID: PMC9848474 DOI: 10.1126/sciadv.add0635] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Grants] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 05/18/2022] [Accepted: 12/15/2022] [Indexed: 06/17/2023]
Abstract
Active matter, which includes crowds of organisms, is composed of constituents that independently consume and dissipate energy. Some active matter systems have been shown to sustain the propagation of various types of waves, resulting from the interplay between density and alignment. Here, we examine a type of solitary wave in dense two-dimensional columns of Solenopsis invicta, fire ants, in which the local activity, density and alignment all play a key role. We demonstrate that these waves are nonlinear and that they are composed of aligned ants that are constrained at the top by the time it takes disordered ants to activate and align and at the bottom by a density minimum enforced by gravity. Our results suggest that intrinsically switchable activity can be a productive framework to understand and trigger a broad range of wave-like behaviors, including stampedes in crowds and herds.
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Affiliation(s)
- Caleb Anderson
- Department of Condensed Matter Physics, University of Barcelona, Barcelona 08028, Spain
- School of Physics, Georgia Institute of Technology, Atlanta, GA 30332, USA
| | | | - Alberto Fernandez-Nieves
- Department of Condensed Matter Physics, University of Barcelona, Barcelona 08028, Spain
- School of Physics, Georgia Institute of Technology, Atlanta, GA 30332, USA
- ICREA-Institució Catalana de Recerca i Estudis Avançats, Barcelona 08010, Spain
- Institute of Complex Systems (UBICS), University of Barcelona, Barcelona 08028, Spain
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Serrano-Muñoz A, Frayle-Pérez S, Reyes A, Almeida Y, Altshuler E, Viera-López G. An autonomous robot for continuous tracking of millimetric-sized walkers. Rev Sci Instrum 2019; 90:014102. [PMID: 30709231 DOI: 10.1063/1.5049377] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Received: 07/20/2018] [Accepted: 12/18/2018] [Indexed: 06/09/2023]
Abstract
The precise and continuous tracking of millimetric-sized walkers-such as ants-is quite important in behavioral studies. However, due to technical limitations, most studies concentrate on trajectories within areas no more than 100 times bigger than the size of the walker or longer trajectories at the expense of either accuracy or continuity. Our work describes a scientific instrument designed to push the boundaries of precise and continuous motion analysis up to 1000 body lengths or more. It consists of a mobile robotic platform that uses digital image processing techniques to track the targets in real time by calculating their spatial position. During the experiments, all the images are stored and afterwards processed to estimate with higher precision the path traced by the walkers. Some preliminary results achieved using the proposed tracking system are presented.
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Affiliation(s)
- A Serrano-Muñoz
- Group of Complex Systems and Statistical Physics, Physics Faculty, University of Havana, 10400 Havana, Cuba
| | - S Frayle-Pérez
- Group of Complex Systems and Statistical Physics, Physics Faculty, University of Havana, 10400 Havana, Cuba
| | - A Reyes
- Group of Complex Systems and Statistical Physics, Physics Faculty, University of Havana, 10400 Havana, Cuba
| | - Y Almeida
- Faculty of Mathematics and Computer Science, University of Havana, 10400 Havana, Cuba
| | - E Altshuler
- Group of Complex Systems and Statistical Physics, Physics Faculty, University of Havana, 10400 Havana, Cuba
| | - G Viera-López
- Group of Complex Systems and Statistical Physics, Physics Faculty, University of Havana, 10400 Havana, Cuba
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Abstract
We numerically study jamming transitions in pedestrian flow interacting with an attraction, mostly based on the social force model for pedestrians who can join the attraction. We formulate the joining probability as a function of social influence from others, reflecting that individual choice behavior is likely influenced by others. By controlling pedestrian influx and the social influence parameter, we identify various pedestrian flow patterns. For the bidirectional flow scenario, we observe a transition from the free flow phase to the freezing phase, in which oppositely walking pedestrians reach a complete stop and block each other. On the other hand, a different transition behavior appears in the unidirectional flow scenario, i.e., from the free flow phase to the localized jam phase and then to the extended jam phase. It is also observed that the extended jam phase can end up in freezing phenomena with a certain probability when pedestrian flux is high with strong social influence. This study highlights that attractive interactions between pedestrians and an attraction can trigger jamming transitions by increasing the number of conflicts among pedestrians near the attraction. In order to avoid excessive pedestrian jams, we suggest suppressing the number of conflicts under a certain level by moderating pedestrian influx especially when the social influence is strong.
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Affiliation(s)
- Jaeyoung Kwak
- Department of Built Environment, Aalto University, Espoo 02150, Finland
| | - Hang-Hyun Jo
- Asia Pacific Center for Theoretical Physics, Pohang 37673, Republic of Korea
- Department of Physics, Pohang University of Science and Technology, Pohang 37673, Republic of Korea
- Department of Computer Science, Aalto University, 02150 Espoo, Finland
| | - Tapio Luttinen
- Department of Built Environment, Aalto University, Espoo 02150, Finland
| | - Iisakki Kosonen
- Department of Built Environment, Aalto University, Espoo 02150, Finland
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Abstract
Flight on the 2D air-water interface, with body weight supported by surface tension, is a unique locomotion strategy well adapted for the environmental niche on the surface of water. Although previously described in aquatic insects like stoneflies, the biomechanics of interfacial flight has never been analysed. Here, we report interfacial flight as an adapted behaviour in waterlily beetles (Galerucella nymphaeae) which are also dexterous airborne fliers. We present the first quantitative biomechanical model of interfacial flight in insects, uncovering an intricate interplay of capillary, aerodynamic and neuromuscular forces. We show that waterlily beetles use their tarsal claws to attach themselves to the interface, via a fluid contact line pinned at the claw. We investigate the kinematics of interfacial flight trajectories using high-speed imaging and construct a mathematical model describing the flight dynamics. Our results show that non-linear surface tension forces make interfacial flight energetically expensive compared with airborne flight at the relatively high speeds characteristic of waterlily beetles, and cause chaotic dynamics to arise naturally in these regimes. We identify the crucial roles of capillary-gravity wave drag and oscillatory surface tension forces which dominate interfacial flight, showing that the air-water interface presents a radically modified force landscape for flapping wing flight compared with air.
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Affiliation(s)
| | | | - Dong Hyun Kim
- Department of Mechanical Engineering, Stanford University, Stanford, CA 94305, USA
| | - Manu Prakash
- Department of Bioengineering, Stanford University, Stanford, CA 94305, USA
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Bazeia D, Pereira MB, Brito AV, Oliveira BF, Ramos JG. A novel procedure for the identification of chaos in complex biological systems. Sci Rep 2017; 7:44900. [PMID: 28322257 DOI: 10.1038/srep44900] [Citation(s) in RCA: 23] [Impact Index Per Article: 3.3] [Reference Citation Analysis] [What about the content of this article? (0)] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/16/2016] [Accepted: 02/14/2017] [Indexed: 12/15/2022] Open
Abstract
We demonstrate the presence of chaos in stochastic simulations that are widely used to study biodiversity in nature. The investigation deals with a set of three distinct species that evolve according to the standard rules of mobility, reproduction and predation, with predation following the cyclic rules of the popular rock, paper and scissors game. The study uncovers the possibility to distinguish between time evolutions that start from slightly different initial states, guided by the Hamming distance which heuristically unveils the chaotic behavior. The finding opens up a quantitative approach that relates the correlation length to the average density of maxima of a typical species, and an ensemble of stochastic simulations is implemented to support the procedure. The main result of the work shows how a single and simple experimental realization that counts the density of maxima associated with the chaotic evolution of the species serves to infer its correlation length. We use the result to investigate others distinct complex systems, one dealing with a set of differential equations that can be used to model a diversity of natural and artificial chaotic systems, and another one, focusing on the ocean water level.
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Abstract
Walking is a fundamental activity of our daily life not only for moving to other places but also for interacting with surrounding environment. While walking on the streets, pedestrians can be aware of attractions like shopping windows. They can be influenced by the attractions and some of them might shift their attention towards the attractions, namely switching behavior. As a first step to incorporate the switching behavior, this study investigates collective effects of switching behavior for an attraction by developing a behavioral model. Numerical simulations exhibit different patterns of pedestrian behavior depending on the strength of the social influence and the average length of stay. When the social influence is strong along with a long length of stay, a saturated phase can be defined at which all the pedestrians have visited the attraction. If the social influence is not strong enough, an unsaturated phase appears where one can observe that some pedestrians head for the attraction while others walk in their desired direction. These collective patterns of pedestrian behavior are summarized in a phase diagram by comparing the number of pedestrians who visited the attraction to the number of passersby near the attraction. Measuring the marginal benefits with respect to the strength of the social influence and the average length of stay enables us to identify under what conditions enhancing these variables would be more effective. The findings from this study can be understood in the context of the pedestrian facility management, for instance, for retail stores.
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Juniper MP, Straube AV, Besseling R, Aarts DG, Dullens RP. Microscopic dynamics of synchronization in driven colloids. Nat Commun 2015; 6:7187. [PMID: 25994921 DOI: 10.1038/ncomms8187] [Citation(s) in RCA: 46] [Impact Index Per Article: 5.1] [Reference Citation Analysis] [What about the content of this article? (0)] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/24/2014] [Accepted: 04/16/2015] [Indexed: 11/08/2022] Open
Abstract
Synchronization of coupled oscillators has been scrutinized for over three centuries, from Huygens' pendulum clocks to physiological rhythms. One such synchronization phenomenon, dynamic mode locking, occurs when naturally oscillating processes are driven by an externally imposed modulation. Typically only averaged or integrated properties are accessible, leaving underlying mechanisms unseen. Here, we visualize the microscopic dynamics underlying mode locking in a colloidal model system, by using particle trajectories to produce phase portraits. Furthermore, we use this approach to examine the enhancement of mode locking in a flexible chain of magnetically coupled particles, which we ascribe to breathing modes caused by mode-locked density waves. Finally, we demonstrate that an emergent density wave in a static colloidal chain mode locks as a quasi-particle, with microscopic dynamics analogous to those seen for a single particle. Our results indicate that understanding the intricate link between emergent behaviour and microscopic dynamics is key to controlling synchronization. Synchronization may occur when naturally oscillating systems are driven by an external modulation, for example, in charge density waves. Here, Juniper et al. visualize the locked modes of synchronization at a microscopic level using a colloidal system.
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