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Lv L, Zeng GL, Zan Y, Hong X, Guo M, Chen G, Tao W, Ding W, Huang Q. A back‐projection‐and‐filtering‐like (BPF‐like) reconstruction method with the deep learning filtration from listmode data in TOF‐PET. Med Phys 2022; 49:2531-2544. [PMID: 35122265 PMCID: PMC10080664 DOI: 10.1002/mp.15520] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/06/2021] [Revised: 01/19/2022] [Accepted: 01/19/2022] [Indexed: 11/11/2022] Open
Abstract
PURPOSE The time-of-flight (TOF) information improves signal-to-noise ratio (SNR) for positron emission tomography (PET) imaging. Existing analytical algorithms for TOF PET usually follow a filtered back-projection process on reconstructing images from the sinogram data. This work aims to develop a back-projection-and-filtering-like (BPF-like) algorithm that reconstructs the TOF PET image directly from listmode data rapidly. METHODS We extended the 2D conventional non-TOF PET projection model to a TOF case, where projection data are represented as line integrals weighted by the one-dimensional TOF kernel along the projection direction. After deriving the central slice theorem and the TOF back-projection of listmode data, we designed a deep learning network with a modified U-net architecture to perform the spatial filtration (reconstruction filter). The proposed BP-Net method was validated via Monte Carlo simulations of TOF PET listmode data with three different time resolutions for two types of activity phantoms. The network was only trained on the simulated full-dose XCAT dataset and then evaluated on XCAT and Jaszczak data with different time resolutions and dose levels. RESULTS Reconstructed images show that when compared with the conventional BPF algorithm and the MLEM algorithm proposed for TOF PET, the proposed BP-Net method obtains better image quality in terms of peak signal-to-noise ratio, relative mean square error, and structure similarity index; besides, the reconstruction speed of the BP-Net is 1.75 times faster than BPF and 29.05 times faster than MLEM using 15 iterations. The results also indicate that the performance of the BP-Net degrades with worse time resolutions and lower tracer doses, but degrades less than BPF or MLEM reconstructions. CONCLUSION In this work, we developed an analytical-like reconstruction in the form of BPF with the reconstruction filtering operation performed via a deep network. The method runs even faster than the conventional BPF algorithm and provides accurate reconstructions from listmode data in TOF-PET, free of rebinning data to a sinogram.
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Affiliation(s)
- Li Lv
- School of Biomedical Engineering Shanghai Jiao Tong University Shanghai 200240 China
| | - Gengsheng L. Zeng
- Department of Computer Science Utah Valley University Orem UT 84058 USA
| | - Yunlong Zan
- Department of Nuclear Medicine Rui Jin Hospital School of Medicine Shanghai Jiao Tong University Shanghai 200240 China
| | - Xiang Hong
- School of Biomedical Engineering Shanghai Jiao Tong University Shanghai 200240 China
| | - Minghao Guo
- School of Electronic Information and Electrical Engineering Shanghai Jiao Tong University Shanghai 200240 China
| | - Gaoyu Chen
- School of Biomedical Engineering Shanghai Jiao Tong University Shanghai 200240 China
| | - Weijie Tao
- School of Biomedical Engineering Shanghai Jiao Tong University Shanghai 200240 China
- Department of Nuclear Medicine Rui Jin Hospital School of Medicine Shanghai Jiao Tong University Shanghai 200240 China
| | - Wenxiang Ding
- School of Biomedical Engineering Shanghai Jiao Tong University Shanghai 200240 China
| | - Qiu Huang
- School of Biomedical Engineering Shanghai Jiao Tong University Shanghai 200240 China
- Department of Nuclear Medicine Rui Jin Hospital School of Medicine Shanghai Jiao Tong University Shanghai 200240 China
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Shopa RY, Klimaszewski K, Kopka P, Kowalski P, Krzemień W, Raczyński L, Wiślicki W, Chug N, Curceanu C, Czerwiński E, Dadgar M, Dulski K, Gajos A, Hiesmayr BC, Kacprzak K, Kapłon Ł, Kisielewska D, Korcyl G, Krawczyk N, Kubicz E, Niedźwiecki S, Raj J, Sharma S, Shivani, Stȩpień EŁ, Tayefi F, Moskal P. Optimisation of the event-based TOF filtered back-projection for online imaging in total-body J-PET. Med Image Anal 2021; 73:102199. [PMID: 34365143 DOI: 10.1016/j.media.2021.102199] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/24/2020] [Revised: 07/21/2021] [Accepted: 07/23/2021] [Indexed: 10/20/2022]
Abstract
We perform a parametric study of the newly developed time-of-flight (TOF) image reconstruction algorithm, proposed for the real-time imaging in total-body Jagiellonian PET (J-PET) scanners. The asymmetric 3D filtering kernel is applied at each most likely position of electron-positron annihilation, estimated from the emissions of back-to-back γ-photons. The optimisation of its parameters is studied using Monte Carlo simulations of a 1-mm spherical source, NEMA IEC and XCAT phantoms inside the ideal J-PET scanner. The combination of high-pass filters which included the TOF filtered back-projection (FBP), resulted in spatial resolution, 1.5 times higher in the axial direction than for the conventional 3D FBP. For realistic 10-minute scans of NEMA IEC and XCAT, which require a trade-off between the noise and spatial resolution, the need for Gaussian TOF kernel components, coupled with median post-filtering, is demonstrated. The best sets of 3D filter parameters were obtained by the Nelder-Mead minimisation of the mean squared error between the resulting and reference images. The approach allows training the reconstruction algorithm for custom scans, using the IEC phantom, when the temporal resolution is below 50 ps. The image quality parameters, estimated for the best outcomes, were systematically better than for the non-TOF FBP.
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Affiliation(s)
- R Y Shopa
- Department of Complex Systems, National Centre for Nuclear Research, 05-400 Otwock-Świerk, Poland.
| | - K Klimaszewski
- Department of Complex Systems, National Centre for Nuclear Research, 05-400 Otwock-Świerk, Poland
| | - P Kopka
- Department of Complex Systems, National Centre for Nuclear Research, 05-400 Otwock-Świerk, Poland
| | - P Kowalski
- Department of Complex Systems, National Centre for Nuclear Research, 05-400 Otwock-Świerk, Poland
| | - W Krzemień
- High Energy Physics Division, National Centre for Nuclear Research, 05-400 Otwock-Świerk, Poland
| | - L Raczyński
- Department of Complex Systems, National Centre for Nuclear Research, 05-400 Otwock-Świerk, Poland
| | - W Wiślicki
- Department of Complex Systems, National Centre for Nuclear Research, 05-400 Otwock-Świerk, Poland
| | - N Chug
- Faculty of Physics, Astronomy and Applied Computer Science, Jagiellonian University, prof. Stanisława Łojasiewicza 11, 30-348 Cracow, Poland; Total-Body Jagiellonian-PET Laboratory, Jagiellonian University, Poland
| | - C Curceanu
- INFN, Laboratori Nazionali di Frascati, Frascati 00044, Italy
| | - E Czerwiński
- Faculty of Physics, Astronomy and Applied Computer Science, Jagiellonian University, prof. Stanisława Łojasiewicza 11, 30-348 Cracow, Poland; Total-Body Jagiellonian-PET Laboratory, Jagiellonian University, Poland
| | - M Dadgar
- Faculty of Physics, Astronomy and Applied Computer Science, Jagiellonian University, prof. Stanisława Łojasiewicza 11, 30-348 Cracow, Poland; Total-Body Jagiellonian-PET Laboratory, Jagiellonian University, Poland
| | - K Dulski
- Faculty of Physics, Astronomy and Applied Computer Science, Jagiellonian University, prof. Stanisława Łojasiewicza 11, 30-348 Cracow, Poland; Total-Body Jagiellonian-PET Laboratory, Jagiellonian University, Poland
| | - A Gajos
- Faculty of Physics, Astronomy and Applied Computer Science, Jagiellonian University, prof. Stanisława Łojasiewicza 11, 30-348 Cracow, Poland; Total-Body Jagiellonian-PET Laboratory, Jagiellonian University, Poland
| | - B C Hiesmayr
- Faculty of Physics, University of Vienna, Vienna 1090, Austria
| | - K Kacprzak
- Faculty of Physics, Astronomy and Applied Computer Science, Jagiellonian University, prof. Stanisława Łojasiewicza 11, 30-348 Cracow, Poland; Total-Body Jagiellonian-PET Laboratory, Jagiellonian University, Poland
| | - Ł Kapłon
- Faculty of Physics, Astronomy and Applied Computer Science, Jagiellonian University, prof. Stanisława Łojasiewicza 11, 30-348 Cracow, Poland; Total-Body Jagiellonian-PET Laboratory, Jagiellonian University, Poland
| | - D Kisielewska
- Faculty of Physics, Astronomy and Applied Computer Science, Jagiellonian University, prof. Stanisława Łojasiewicza 11, 30-348 Cracow, Poland; Total-Body Jagiellonian-PET Laboratory, Jagiellonian University, Poland
| | - G Korcyl
- Faculty of Physics, Astronomy and Applied Computer Science, Jagiellonian University, prof. Stanisława Łojasiewicza 11, 30-348 Cracow, Poland; Total-Body Jagiellonian-PET Laboratory, Jagiellonian University, Poland
| | - N Krawczyk
- Faculty of Physics, Astronomy and Applied Computer Science, Jagiellonian University, prof. Stanisława Łojasiewicza 11, 30-348 Cracow, Poland; Total-Body Jagiellonian-PET Laboratory, Jagiellonian University, Poland
| | - E Kubicz
- Faculty of Physics, Astronomy and Applied Computer Science, Jagiellonian University, prof. Stanisława Łojasiewicza 11, 30-348 Cracow, Poland; Total-Body Jagiellonian-PET Laboratory, Jagiellonian University, Poland
| | - Sz Niedźwiecki
- Faculty of Physics, Astronomy and Applied Computer Science, Jagiellonian University, prof. Stanisława Łojasiewicza 11, 30-348 Cracow, Poland; Total-Body Jagiellonian-PET Laboratory, Jagiellonian University, Poland
| | - J Raj
- Faculty of Physics, Astronomy and Applied Computer Science, Jagiellonian University, prof. Stanisława Łojasiewicza 11, 30-348 Cracow, Poland; Total-Body Jagiellonian-PET Laboratory, Jagiellonian University, Poland
| | - S Sharma
- Faculty of Physics, Astronomy and Applied Computer Science, Jagiellonian University, prof. Stanisława Łojasiewicza 11, 30-348 Cracow, Poland; Total-Body Jagiellonian-PET Laboratory, Jagiellonian University, Poland
| | - Shivani
- Faculty of Physics, Astronomy and Applied Computer Science, Jagiellonian University, prof. Stanisława Łojasiewicza 11, 30-348 Cracow, Poland; Total-Body Jagiellonian-PET Laboratory, Jagiellonian University, Poland
| | - E Ł Stȩpień
- Faculty of Physics, Astronomy and Applied Computer Science, Jagiellonian University, prof. Stanisława Łojasiewicza 11, 30-348 Cracow, Poland; Total-Body Jagiellonian-PET Laboratory, Jagiellonian University, Poland
| | - F Tayefi
- Faculty of Physics, Astronomy and Applied Computer Science, Jagiellonian University, prof. Stanisława Łojasiewicza 11, 30-348 Cracow, Poland; Total-Body Jagiellonian-PET Laboratory, Jagiellonian University, Poland
| | - P Moskal
- Faculty of Physics, Astronomy and Applied Computer Science, Jagiellonian University, prof. Stanisława Łojasiewicza 11, 30-348 Cracow, Poland; Total-Body Jagiellonian-PET Laboratory, Jagiellonian University, Poland
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