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Bonnet H, Coche-Guérente L, Defrancq E, Spinelli N, Van der Heyden A, Dejeu J. Negative SPR Signals during Low Molecular Weight Analyte Recognition. Anal Chem 2021; 93:4134-4140. [PMID: 33577288 DOI: 10.1021/acs.analchem.1c00071] [Citation(s) in RCA: 13] [Impact Index Per Article: 4.3] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
Abstract
Surface plasmon resonance (SPR) is a powerful technique for studying biomolecular interactions mainly due to its sensitivity and real-time and label free advantages. While SPR signals are usually positive, only a few studies have reported sensorgrams with negative signals. The aim of the present work is to investigate and to explain the observation of negative SPR signals with the hypothesis that it reflects major changes in ligand conformation resulting from target binding. We demonstrated that these negative unconventional signals were due to the negative complex (ligand/analyte) refractive index increment (RII) deviation from the sum of the RII of the individual entities which counterbalanced the theoretical increase of the signal triggered by the target recognition and the ligand folding. We also found that the conformation change of biomolecules can induce a negative or a positive complex RII deviation depending on its sequence and immobilization mode.
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Affiliation(s)
- H Bonnet
- Université Grenoble Alpes, CNRS, DCM UMR-5250, F-38000 Grenoble, France
| | - L Coche-Guérente
- Université Grenoble Alpes, CNRS, DCM UMR-5250, F-38000 Grenoble, France
| | - E Defrancq
- Université Grenoble Alpes, CNRS, DCM UMR-5250, F-38000 Grenoble, France
| | - N Spinelli
- Université Grenoble Alpes, CNRS, DCM UMR-5250, F-38000 Grenoble, France
| | - A Van der Heyden
- Université Grenoble Alpes, CNRS, DCM UMR-5250, F-38000 Grenoble, France
| | - J Dejeu
- Université Grenoble Alpes, CNRS, DCM UMR-5250, F-38000 Grenoble, France
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Prado E, Bonnat L, Bonnet H, Lavergne T, Van der Heyden A, Pratviel G, Dejeu J, Defrancq E. Influence of the SPR Experimental Conditions on the G-Quadruplex DNA Recognition by Porphyrin Derivatives. Langmuir 2018; 34:13057-13064. [PMID: 30293430 DOI: 10.1021/acs.langmuir.8b02942] [Citation(s) in RCA: 10] [Impact Index Per Article: 1.7] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/08/2023]
Abstract
Surface plasmon resonance (SPR) is a powerful technique to study the interactions of ligands with analytes and therefore a number of biosensor surfaces and injection methods have been developed so far. However, many experimental parameters can affect the interactions and consequently the affinity measurements. In particular, the interactions of positively charged analytes (often used for anionic nucleic acids targets) can be influenced by the sensing surfaces (e.g., negatively charged), leading to significant nonspecific interactions as well as regeneration problems. The aim of the present work is to investigate the effect of different parameters, including ionic strength, SPR biosensor (i.e., nature of the surfaces), and the injection method on the recognition of porphyrin G-quadruplex ligands. We demonstrate that the injection method does not influence the affinity whereas the ionic strength and the nature of the surface impact the recognition properties of the porphyrin for the G-quadruplex DNA. We also found that self-assembled monolayer coating surface presents many advantages in comparison with carboxymethylated dextran surface for SPR studies of G-quadruplex DNA/ligand interactions: (i) the electrostatic interaction with charged analytes is less important, (ii) its structure/composition is less sensitive to the ionic concentration and less prone to unspecific adsorption, (iii) it is easily homemade, and (iv) the cost is approximately 10 times cheaper.
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Affiliation(s)
- E Prado
- Univ. Grenoble Alpes, CNRS, DCM , 38000 Grenoble , France
| | - L Bonnat
- Univ. Grenoble Alpes, CNRS, DCM , 38000 Grenoble , France
| | - H Bonnet
- Univ. Grenoble Alpes, CNRS, DCM , 38000 Grenoble , France
| | - T Lavergne
- Univ. Grenoble Alpes, CNRS, DCM , 38000 Grenoble , France
| | | | - G Pratviel
- CNRS, Laboratoire de Chimie de Coordination , 205 route de Narbonne, BP44099 , F-31077 Toulouse Cedex 4, France
- Université de Toulouse, UPS, INPT , Toulouse , France
| | - J Dejeu
- Univ. Grenoble Alpes, CNRS, DCM , 38000 Grenoble , France
| | - E Defrancq
- Univ. Grenoble Alpes, CNRS, DCM , 38000 Grenoble , France
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Proesmans W, Van Damme B, Marchal G, Baert A, Wolff E, Meradji M, Van der Heyden A. [Klippel-Trenaunay syndrome with systemic hypertension and chronic renal failure]. Ann Pediatr (Paris) 1982; 29:671. [PMID: 6295253] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [MESH Headings] [Subscribe] [Scholar Register] [Indexed: 01/19/2023]
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