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Schweingruber N, Bremer J, Wiehe A, Mader MMD, Mayer C, Woo MS, Kluge S, Grensemann J, Quandt F, Gempt J, Fischer M, Thomalla G, Gerloff C, Sauvigny J, Czorlich P. Early prediction of ventricular peritoneal shunt dependency in aneurysmal subarachnoid haemorrhage patients by recurrent neural network-based machine learning using routine intensive care unit data. J Clin Monit Comput 2024:10.1007/s10877-024-01151-4. [PMID: 38512361 DOI: 10.1007/s10877-024-01151-4] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/26/2023] [Accepted: 03/08/2024] [Indexed: 03/23/2024]
Abstract
Aneurysmal subarachnoid haemorrhage (aSAH) can lead to complications such as acute hydrocephalic congestion. Treatment of this acute condition often includes establishing an external ventricular drainage (EVD). However, chronic hydrocephalus develops in some patients, who then require placement of a permanent ventriculoperitoneal (VP) shunt. The aim of this study was to employ recurrent neural network (RNN)-based machine learning techniques to identify patients who require VP shunt placement at an early stage. This retrospective single-centre study included all patients who were diagnosed with aSAH and treated in the intensive care unit (ICU) between November 2010 and May 2020 (n = 602). More than 120 parameters were analysed, including routine neurocritical care data, vital signs and blood gas analyses. Various machine learning techniques, including RNNs and gradient boosting machines, were evaluated for their ability to predict VP shunt dependency. VP-shunt dependency could be predicted using an RNN after just one day of ICU stay, with an AUC-ROC of 0.77 (CI: 0.75-0.79). The accuracy of the prediction improved after four days of observation (Day 4: AUC-ROC 0.81, CI: 0.79-0.84). At that point, the accuracy of the prediction was 76% (CI: 75.98-83.09%), with a sensitivity of 85% (CI: 83-88%) and a specificity of 74% (CI: 71-78%). RNN-based machine learning has the potential to predict VP shunt dependency on Day 4 after ictus in aSAH patients using routine data collected in the ICU. The use of machine learning may allow early identification of patients with specific therapeutic needs and accelerate the execution of required procedures.
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Affiliation(s)
- Nils Schweingruber
- Department of Neurology, University Medical Center Hamburg-Eppendorf, 20246, Hamburg, Germany
| | - Jan Bremer
- Department of Neurology, University Medical Center Hamburg-Eppendorf, 20246, Hamburg, Germany
| | - Anton Wiehe
- Department of Neurology, University Medical Center Hamburg-Eppendorf, 20246, Hamburg, Germany
- Department of Informatics, University of Hamburg, 22527, Hamburg, Germany
| | - Marius Marc-Daniel Mader
- Department of Neurosurgery, University Medical Center Hamburg-Eppendorf, Martinistr. 52, 20246, Hamburg, Germany
- Institute for Stem Cell Biology and Regenerative Medicine, Stanford University School of Medicine, Stanford, CA, 94305, USA
| | - Christina Mayer
- Department of Neurology, University Medical Center Hamburg-Eppendorf, 20246, Hamburg, Germany
- Institute of Neuroimmunology and Multiple Sclerosis (INIMS), Center for Molecular Neurobiology Hamburg (ZMNH), University Medical Center Hamburg-Eppendorf, 20246, Hamburg, Germany
| | - Marcel Seungsu Woo
- Department of Neurology, University Medical Center Hamburg-Eppendorf, 20246, Hamburg, Germany
- Institute of Neuroimmunology and Multiple Sclerosis (INIMS), Center for Molecular Neurobiology Hamburg (ZMNH), University Medical Center Hamburg-Eppendorf, 20246, Hamburg, Germany
| | - Stefan Kluge
- Department of Intensive Care Medicine, University Medical Center Hamburg-Eppendorf, 20246, Hamburg, Germany
| | - Jörn Grensemann
- Department of Intensive Care Medicine, University Medical Center Hamburg-Eppendorf, 20246, Hamburg, Germany
| | - Fanny Quandt
- Department of Neurology, University Medical Center Hamburg-Eppendorf, 20246, Hamburg, Germany
| | - Jens Gempt
- Department of Neurosurgery, University Medical Center Hamburg-Eppendorf, Martinistr. 52, 20246, Hamburg, Germany
| | - Marlene Fischer
- Department of Intensive Care Medicine, University Medical Center Hamburg-Eppendorf, 20246, Hamburg, Germany
| | - Götz Thomalla
- Department of Neurology, University Medical Center Hamburg-Eppendorf, 20246, Hamburg, Germany
| | - Christian Gerloff
- Department of Neurology, University Medical Center Hamburg-Eppendorf, 20246, Hamburg, Germany
| | - Jennifer Sauvigny
- Department of Neurosurgery, University Medical Center Hamburg-Eppendorf, Martinistr. 52, 20246, Hamburg, Germany
| | - Patrick Czorlich
- Department of Neurosurgery, University Medical Center Hamburg-Eppendorf, Martinistr. 52, 20246, Hamburg, Germany.
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Schweingruber N, Mader M, Wiehe A, Röder F, Göttsche J, Kluge S, Westphal M, Czorlich P, Gerloff C. A recurrent machine learning model predicts intracranial hypertension in neurointensive care patients. Brain 2022; 145:2910-2919. [PMID: 35139181 PMCID: PMC9486888 DOI: 10.1093/brain/awab453] [Citation(s) in RCA: 12] [Impact Index Per Article: 6.0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/30/2021] [Revised: 10/24/2021] [Accepted: 11/19/2021] [Indexed: 11/14/2022] Open
Abstract
The evolution of intracranial pressure (ICP) of critically ill patients admitted to a neurointensive care unit (ICU) is difficult to predict. Besides the underlying disease and compromised intracranial space, ICP is affected by a multitude of factors, many of which are monitored on the ICU, but the complexity of the resulting patterns limits their clinical use. This paves the way for new machine learning (ML) techniques to assist clinical management of patients undergoing invasive ICP monitoring independent of the underlying disease. An institutional cohort (ICP-ICU) of patients with invasive ICP monitoring (n = 1346) was used to train recurrent ML models to predict the occurrence of ICP increases of ≥ 22mmHg over a long (> 2 hours) time period in the upcoming hours. External validation was performed on patients undergoing invasive ICP measurement in two publicly available datasets (Medical Information Mart for Intensive Care (MIMIC, n = 998) and eICU Collaborative Research Database (eICU, n = 1634)). Different distances (1h-24 h) between prediction time point and upcoming critical phase were evaluated, demonstrating a decrease in performance but still robust AUC-ROC with larger distances (24 h AUC-ROC: ICP-ICU 0.826 ± 0.0071, MIMIC 0.836 ± 0.0063, eICU 0.779 ± 0.0046, 1 h AUC-ROC: ICP-ICU 0.982 ± 0.0008, MIMIC 0.965 ± 0.0010, eICU 0.941 ± 0.0025). The model operates on sparse hourly data and is stable in handling variable input lengths and missingness through its nature of recurrence and internal memory. Calculation of gradient-based feature importance revealed individual underlying decisions for our Long Short Time Memory (LSTM) based model and thereby provided improved clinical interpretability. Recurrent ML models have the potential to be an effective tool for the prediction of ICP increases with high translational potential.
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Affiliation(s)
- Nils Schweingruber
- Department of Neurology, University Medical Centre Hamburg-Eppendorf, Hamburg, 20246, Germany
| | - Marius Mader
- Department of Neurosurgery, University Medical Centre Hamburg-Eppendorf, Hamburg 20246, Germany.,Institute for Stem Cell Biology and Regenerative Medicine, Stanford University
| | - Anton Wiehe
- Department of Neurology, University Medical Centre Hamburg-Eppendorf, Hamburg, 20246, Germany.,Department of Informatics, University of Hamburg, Hamburg, 22527, Germany
| | - Frank Röder
- Department of Neurology, University Medical Centre Hamburg-Eppendorf, Hamburg, 20246, Germany.,Department of Informatics, University of Hamburg, Hamburg, 22527, Germany
| | - Jennifer Göttsche
- Department of Neurosurgery, University Medical Centre Hamburg-Eppendorf, Hamburg 20246, Germany
| | - Stefan Kluge
- Department of Intensive Care Medicine, University Medical Centre Hamburg-Eppendorf, Hamburg, 20246, Germany
| | - Manfred Westphal
- Department of Neurosurgery, University Medical Centre Hamburg-Eppendorf, Hamburg 20246, Germany
| | - Patrick Czorlich
- Department of Neurosurgery, University Medical Centre Hamburg-Eppendorf, Hamburg 20246, Germany
| | - Christian Gerloff
- Department of Neurology, University Medical Centre Hamburg-Eppendorf, Hamburg, 20246, Germany
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Staegemann MH, Gräfe S, Haag R, Wiehe A. A toolset of functionalized porphyrins with different linker strategies for application in bioconjugation. Org Biomol Chem 2016; 14:9114-9132. [DOI: 10.1039/c6ob01551d] [Citation(s) in RCA: 9] [Impact Index Per Article: 1.1] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/22/2023]
Abstract
Polar, functionalized A3B-porphyrins are conjugated to hyperbranched polyglycerol (hPG) as an example of a biocompatible carrier system for photodynamic therapy.
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Affiliation(s)
- M. H. Staegemann
- Institut für Chemie und Biochemie
- Freie Universität Berlin
- 14195 Berlin
- Germany
- Biolitec research GmbH
| | - S. Gräfe
- Biolitec research GmbH
- 07745 Jena
- Germany
| | - R. Haag
- Institut für Chemie und Biochemie
- Freie Universität Berlin
- 14195 Berlin
- Germany
| | - A. Wiehe
- Institut für Chemie und Biochemie
- Freie Universität Berlin
- 14195 Berlin
- Germany
- Biolitec research GmbH
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Klesing J, Wiehe A, Gitter B, Gräfe S, Epple M. Positively charged calcium phosphate/polymer nanoparticles for photodynamic therapy. J Mater Sci Mater Med 2010; 21:887-92. [PMID: 19924519 DOI: 10.1007/s10856-009-3934-7] [Citation(s) in RCA: 18] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 06/28/2009] [Accepted: 11/04/2009] [Indexed: 05/25/2023]
Abstract
The charge of nanoparticles influences their ability to pass through the cellular membrane, and a positive charge should be beneficial. The negative charge of calcium phosphate nanoparticles with an inner shell of carboxymethyl cellulose (CMC) was reversed by adding an outer shell of poly(ethyleneimine) (PEI) into which the photoactive dye 5,10,15,20-tetrakis(3-hydroxyphenyl)-porphyrin (mTHPP) was loaded. The aqueous dispersion of the nanoparticles was used for photodynamic therapy with HT29 cells (human colon adenocarcinoma cells), HIG-82 cells (rabbit synoviocytes), and J774A.1 cells (murine macrophages). A high photodynamic activity (killing) together with a very low dark toxicity was observed for HIG-82 and for J774.1 cells at 2 microM dye concentration. The killing efficiency was equivalent to the pure photoactive dye that, however, needs to be administered in alcoholic solution.
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Affiliation(s)
- J Klesing
- Inorganic Chemistry and Center for Nanointegration Duisburg-Essen, University of Duisburg-Essen, Universitaetsstr. 5-7, 45117 Essen, Germany
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Kettering MK, Reschke C, Aicher D, Gräfe S, Wiehe A, Oechtering G, Kaiser WA, Hilger I. Photodynamische Therapie zur Behandlung der Rheumatoiden Arthritis: erste in vitro-Untersuchungen mit neuen Photosensibilisatoren. ROFO-FORTSCHR RONTG 2009. [DOI: 10.1055/s-0029-1221333] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/20/2022]
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Affiliation(s)
- G. Elger
- Free University Berlin, Institute of Experimental Physics, Arnimallee 14, D-14195 Berlin, Germany
| | - A. Wiehe
- Free University Berlin, Institute of Organic Chemistry, Takustr. 3, D-14195 Berlin, Germany
| | - K. Möbius
- Free University Berlin, Institute of Experimental Physics, Arnimallee 14, D-14195 Berlin, Germany
| | - H. Kurreck
- Free University Berlin, Institute of Organic Chemistry, Takustr. 3, D-14195 Berlin, Germany
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Kurreck H, Aguirre S, Dieks H, Gätschmann J, Gersdorff J, Newman H, Schubert H, Speck M, Stabingis T, Sobek J, Tian P, Wiehe A. Mimicking primary processes in photosynthesis—covalently linked porphyrin quinones. Radiat Phys Chem Oxf Engl 1993 1995. [DOI: 10.1016/0969-806x(94)e0037-j] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.1] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/27/2022]
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