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Shahidi N, Franch M, Parajuli A, Schrater P, Wright A, Pitkow X, Dragoi V. Population coding of strategic variables during foraging in freely moving macaques. Nat Neurosci 2024; 27:772-781. [PMID: 38443701 PMCID: PMC11001579 DOI: 10.1038/s41593-024-01575-w] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/24/2021] [Accepted: 01/09/2024] [Indexed: 03/07/2024]
Abstract
Until now, it has been difficult to examine the neural bases of foraging in naturalistic environments because previous approaches have relied on restrained animals performing trial-based foraging tasks. Here we allowed unrestrained monkeys to freely interact with concurrent reward options while we wirelessly recorded population activity in the dorsolateral prefrontal cortex. The animals decided when and where to forage based on whether their prediction of reward was fulfilled or violated. This prediction was not solely based on a history of reward delivery, but also on the understanding that waiting longer improves the chance of reward. The task variables were continuously represented in a subspace of the high-dimensional population activity, and this compressed representation predicted the animal's subsequent choices better than the true task variables and as well as the raw neural activity. Our results indicate that monkeys' foraging strategies are based on a cortical model of reward dynamics as animals freely explore their environment.
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Affiliation(s)
- Neda Shahidi
- Department of Neurobiology and Anatomy, McGovern Medical School, University of Texas, Houston, Houston, TX, USA
- Georg-Elias-Müller-Institute for Psychology, Georg August-Universität, Göttingen, Germany
- Cognitive Neuroscience Laboratory, German Primate Center, Göttingen, Germany
| | - Melissa Franch
- Department of Neurobiology and Anatomy, McGovern Medical School, University of Texas, Houston, Houston, TX, USA
| | - Arun Parajuli
- Department of Neurobiology and Anatomy, McGovern Medical School, University of Texas, Houston, Houston, TX, USA
| | - Paul Schrater
- Department of Computer Science, University of Minnesota, Minneapolis, MN, USA
- Department of Psychology, University of Minnesota, Minneapolis, MN, USA
| | - Anthony Wright
- Department of Neurobiology and Anatomy, McGovern Medical School, University of Texas, Houston, Houston, TX, USA
| | - Xaq Pitkow
- Department of Neuroscience, Baylor College of Medicine, Houston, TX, USA.
- Department of Electrical and Computer Engineering, Rice University, Houston, TX, USA.
- Center for Neuroscience and Artificial Intelligence, Baylor College of Medicine, Houston, TX, USA.
- Neuroscience Institute, Carnegie Mellon University, Pittsburgh, PA, USA.
- Department of Machine Learning, Carnegie Mellon University, Pittsburgh, PA, USA.
| | - Valentin Dragoi
- Department of Neurobiology and Anatomy, McGovern Medical School, University of Texas, Houston, Houston, TX, USA.
- Department of Electrical and Computer Engineering, Rice University, Houston, TX, USA.
- Neuroengineering Initiative, Rice University, Houston, TX, USA.
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Franch M, Yellapantula S, Parajuli A, Kharas N, Wright A, Aazhang B, Dragoi V. Publisher Correction: Visuo-frontal interactions during social learning in freely moving macaques. Nature 2024; 628:E3. [PMID: 38519583 PMCID: PMC11023924 DOI: 10.1038/s41586-024-07301-7] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 03/25/2024]
Affiliation(s)
- Melissa Franch
- Deparment of Neurobiology and Anatomy, McGovern Medical School, University of Texas, Houston, TX, USA
| | - Sudha Yellapantula
- Department of Electrical and Computer Engineering, Rice University, Houston, TX, USA
| | - Arun Parajuli
- Deparment of Neurobiology and Anatomy, McGovern Medical School, University of Texas, Houston, TX, USA
| | - Natasha Kharas
- Deparment of Neurobiology and Anatomy, McGovern Medical School, University of Texas, Houston, TX, USA
| | - Anthony Wright
- Deparment of Neurobiology and Anatomy, McGovern Medical School, University of Texas, Houston, TX, USA
| | - Behnaam Aazhang
- Department of Electrical and Computer Engineering, Rice University, Houston, TX, USA
| | - Valentin Dragoi
- Deparment of Neurobiology and Anatomy, McGovern Medical School, University of Texas, Houston, TX, USA.
- Department of Electrical and Computer Engineering, Rice University, Houston, TX, USA.
- Neuroengineering Initiative, Rice University, Houston, TX, USA.
- Houston Methodist Research Institute, Houston, TX, USA.
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Franch M, Yellapantula S, Parajuli A, Kharas N, Wright A, Aazhang B, Dragoi V. Visuo-frontal interactions during social learning in freely moving macaques. Nature 2024; 627:174-181. [PMID: 38355804 PMCID: PMC10959748 DOI: 10.1038/s41586-024-07084-x] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/21/2023] [Accepted: 01/16/2024] [Indexed: 02/16/2024]
Abstract
Social interactions represent a ubiquitous aspect of our everyday life that we acquire by interpreting and responding to visual cues from conspecifics1. However, despite the general acceptance of this view, how visual information is used to guide the decision to cooperate is unknown. Here, we wirelessly recorded the spiking activity of populations of neurons in the visual and prefrontal cortex in conjunction with wireless recordings of oculomotor events while freely moving macaques engaged in social cooperation. As animals learned to cooperate, visual and executive areas refined the representation of social variables, such as the conspecific or reward, by distributing socially relevant information among neurons in each area. Decoding population activity showed that viewing social cues influences the decision to cooperate. Learning social events increased coordinated spiking between visual and prefrontal cortical neurons, which was associated with improved accuracy of neural populations to encode social cues and the decision to cooperate. These results indicate that the visual-frontal cortical network prioritizes relevant sensory information to facilitate learning social interactions while freely moving macaques interact in a naturalistic environment.
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Affiliation(s)
- Melissa Franch
- Deparment of Neurobiology and Anatomy, McGovern Medical School, University of Texas, Houston, TX, USA
| | - Sudha Yellapantula
- Department of Electrical and Computer Engineering, Rice University, Houston, TX, USA
| | - Arun Parajuli
- Deparment of Neurobiology and Anatomy, McGovern Medical School, University of Texas, Houston, TX, USA
| | - Natasha Kharas
- Deparment of Neurobiology and Anatomy, McGovern Medical School, University of Texas, Houston, TX, USA
| | - Anthony Wright
- Deparment of Neurobiology and Anatomy, McGovern Medical School, University of Texas, Houston, TX, USA
| | - Behnaam Aazhang
- Department of Electrical and Computer Engineering, Rice University, Houston, TX, USA
| | - Valentin Dragoi
- Deparment of Neurobiology and Anatomy, McGovern Medical School, University of Texas, Houston, TX, USA.
- Department of Electrical and Computer Engineering, Rice University, Houston, TX, USA.
- Neuroengineering Initiative, Rice University, Houston, TX, USA.
- Houston Methodist Research Institute, Houston, TX, USA.
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Parajuli A, Gutnisky D, Tandon N, Dragoi V. Endogenous fluctuations in cortical state selectively enhance different modes of sensory processing in human temporal lobe. Nat Commun 2023; 14:5591. [PMID: 37696880 PMCID: PMC10495466 DOI: 10.1038/s41467-023-41406-3] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/22/2022] [Accepted: 08/31/2023] [Indexed: 09/13/2023] Open
Abstract
The degree of synchronized fluctuations in neocortical network activity can vary widely during alertness. One influential idea that has emerged over the past few decades is that perceptual decisions are more accurate when the state of population activity is desynchronized. This suggests that optimal task performance may occur during a particular cortical state - the desynchronized state. Here we show that, contrary to this view, cortical state can both facilitate and suppress perceptual performance in a task-dependent manner. We performed electrical recordings from surface-implanted grid electrodes in the temporal lobe while human subjects completed two perceptual tasks. We found that when local population activity is in a synchronized state, network and perceptual performance are enhanced in a detection task and impaired in a discrimination task, but these modulatory effects are reversed when population activity is desynchronized. These findings indicate that the brain has adapted to take advantage of endogenous fluctuations in the state of neural populations in temporal cortex to selectively enhance different modes of sensory processing during perception in a state-dependent manner.
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Affiliation(s)
- Arun Parajuli
- Department of Neurobiology and Anatomy, McGovern Medical School, University of Texas at Houston, Houston, TX, USA
| | - Diego Gutnisky
- Department of Neurobiology and Anatomy, McGovern Medical School, University of Texas at Houston, Houston, TX, USA
- Janelia Research Campus, Howard Hughes Medical Institute, Ashburn, VA, USA
| | - Nitin Tandon
- Vivian L. Smith Department of Neurosurgery, University of Texas Medical School, Houston, TX, USA
| | - Valentin Dragoi
- Department of Neurobiology and Anatomy, McGovern Medical School, University of Texas at Houston, Houston, TX, USA.
- Department of Electrical and Computer Engineering, Rice University, Houston, TX, USA.
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Kirolos A, Blacow RM, Parajuli A, Welton NJ, Khanna A, Allen SJ, McAllister DA, Campbell H, Nair H. The impact of childhood malnutrition on mortality from pneumonia: a systematic review and network meta-analysis. BMJ Glob Health 2021; 6:bmjgh-2021-007411. [PMID: 34848440 PMCID: PMC8634228 DOI: 10.1136/bmjgh-2021-007411] [Citation(s) in RCA: 12] [Impact Index Per Article: 4.0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/13/2021] [Accepted: 11/09/2021] [Indexed: 11/03/2022] Open
Abstract
INTRODUCTION Childhood malnutrition is widespread in low-income and middle-income countries (LMICs) and increases the frequency and severity of infections such as pneumonia. We aimed to identify studies investigating pneumonia deaths in malnourished children and estimate mortality risk by malnutrition severity. METHODS We conducted a systematic review of MEDLINE, EMBASE and Global Health databases to identify relevant studies. We used a network meta-analysis to derive ORs of death from pneumonia for moderately and severely underweight children using low weight-for-age, the most reported measure of malnutrition. We compared meta-estimates of studies conducted before and after 2000 to assess changes in mortality risk over time. We estimated the prevalence of underweight hospitalised children from hospital-based cohort studies and calculated the population attributable fraction of in-hospital pneumonia deaths from being underweight using our results. RESULTS Our network meta-analysis included 33 544 underweight children from 23 studies. The estimated OR of death from pneumonia was 2.0 (95% CI 1.6 to 2.6) and 4.6 (95% CI 3.7 to 5.9) for children moderately and severely underweight, respectively. The OR of death from pneumonia for those severely underweight was 5.3 (95% CI 3.9 to 7.4) pre-2000 and remained high post-2000 at 4.1 (95% CI 3.0 to 6.0). Prevalence of underweight children hospitalised with pneumonia varied (median 40.2%, range 19.6-66.3) but was high across many LMIC settings. We estimated a median 18.3% (range 10.8-34.6) and 40.9% (range 14.7-69.9) of in-hospital pneumonia deaths were attributable to being moderately and severely underweight, respectively. CONCLUSIONS The risk of death from childhood pneumonia dramatically increases with malnutrition severity. This risk has remained high in recent years with an estimated over half of in-hospital pneumonia deaths attributable to child malnutrition. Prevention and treatment of all child malnutrition must be prioritised to maintain progress on reducing pneumonia deaths.
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Affiliation(s)
- Amir Kirolos
- University of Liverpool Department of Women's and Children's Health, Liverpool, UK .,Malawi-Liverpool-Wellcome Trust Clinical Research Programme, Blantyre, Malawi.,The University of Edinburgh Usher Institute, Edinburgh, UK
| | | | - Arun Parajuli
- The University of Edinburgh Usher Institute, Edinburgh, UK
| | - Nicky J Welton
- University of Bristol Bristol Population Health Science Institute, Bristol, UK
| | - Alisha Khanna
- The University of Edinburgh Usher Institute, Edinburgh, UK
| | - Stephen J Allen
- Clinical Sciences, Liverpool School of Tropical Medicine, Liverpool, UK.,Alder Hey Children's Hospital, Liverpool, Merseyside, UK
| | | | - Harry Campbell
- The University of Edinburgh Usher Institute, Edinburgh, UK
| | - Harish Nair
- The University of Edinburgh Usher Institute, Edinburgh, UK
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Francis SC, Parajuli A, Mardh O, Falconer J, Andreasen A, Harding-Esch E. Technologies, strategies and approaches for testing populations at risk of sexually transmitted infections: a systematic review protocol to inform prevention and control in EU/EEA countries. Syst Rev 2020; 9:64. [PMID: 32213195 PMCID: PMC7098083 DOI: 10.1186/s13643-020-01303-y] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Journal Information] [Submit a Manuscript] [Subscribe] [Scholar Register] [Received: 05/09/2019] [Accepted: 02/20/2020] [Indexed: 01/21/2023] Open
Abstract
OBJECTIVES This protocol outlines a systematic review methodology, aiming to assess the recent evidence-base for the impact of testing strategies and approaches on access to testing, testing coverage, and linkage to care for populations at risk for specific curable sexually transmitted infections (STIs) (chlamydia, gonorrhoea, syphilis, trichomoniasis, and Mycoplasma genitalium infections). DATA SOURCES These include MEDLINE, Embase, PsycINFO, Global Health, Cochrane Database, Epistemonikos, CINAHL Plus, and Web of Science Core Collection. REVIEW METHODS Papers reporting primary data from 1 January 2012 onwards will be included. Titles, abstracts, and full texts will be reviewed for inclusion, and data will be extracted using a pre-specified and piloted data extraction form, by two independent reviewers. Experts in the field will be contacted and interviewed for further information about ongoing or unpublished studies. A narrative synthesis of the findings will be conducted. DISCUSSION Outcomes of this study will inform policy makers, national and international programme coordinators, public health and clinical experts, and civil society organisations involved in STI prevention and control in EU/EEA countries and elsewhere. The review will provide a direction for future researchers and programmers seeking to improve STI testing services among key populations at high risk for STIs. SYSTEMATIC REVIEW REGISTRATION In accordance with guidelines outlined in the PRISMA-P methodology, this protocol was registered with the International Prospective Register of Systematic Reviews (PROSPERO) on 30 January 2019: CRD42019118261.
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Affiliation(s)
- Suzanna C Francis
- London School of Hygiene and Tropical Medicine, Keppel Street, London, WC1E 7HT, UK.
| | - Arun Parajuli
- London School of Hygiene and Tropical Medicine, Keppel Street, London, WC1E 7HT, UK
| | - Otilia Mardh
- European Centre for Disease Prevention and Control, Solna, Sweden
| | - Jane Falconer
- London School of Hygiene and Tropical Medicine, Keppel Street, London, WC1E 7HT, UK
| | | | - Emma Harding-Esch
- London School of Hygiene and Tropical Medicine, Keppel Street, London, WC1E 7HT, UK
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Abstract
Proprotein convertase subtilisin kexin 9 (PCSK9) is a serine protease with a key role in regulating plasma low-density lipoprotein (LDL) concentration. Since its discovery via parallel molecular biology and clinical genetics studies in 2003, work to characterize PCSK9 has shed new light on the life-cycle of the low-density lipoprotein receptor and the molecular basis of familial hypercholesterolaemia. These discoveries have also led to the advent of the PCSK9 inhibitors, a new generation of low-density lipoprotein cholesterol (LDL-C) lowering drugs. Clinical trials have shown these agents to be both safe and capable of unprecedented reductions in LDL-C, and it is hoped they may herald a new era of cardiovascular disease prevention. As such, the still evolving PCSK9 story serves as a particularly successful example of translational medicine. This review provides a summary of the principal PCSK9 research findings, which underpin our current understanding of its function and clinical relevance.
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Affiliation(s)
- Jonathan Malo
- Clinical Biochemistry, Royal Infirmary Edinburgh, Edinburgh, UK
| | - Arun Parajuli
- Edinburgh Medical School, University of Edinburgh, Edinburgh, UK
| | - Simon W Walker
- Clinical Biochemistry, Royal Infirmary Edinburgh, Edinburgh, UK
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Laudari U, Parajuli TP, Parajuli A, Rupakheti SR, Joshi MR. Early identification of patient at risk of acute severe pancreatitis with systemic inflammatory response. J Soc Surg Nepal 2016. [DOI: 10.3126/jssn.v18i3.15288] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/18/2022] Open
Abstract
Introduction and Objective: Clinically, the Systemic Inflammatory Response Syndrome (SIRS) is identified by two or more symptoms including fever or hypothermia, tachycardia, tachypnoea and change in blood leukocyte count. The relationship between SIRS symptoms at the time of presentation and severity of pancreatitis is yet to be determined though progression of SIRS in subsequent days has been already correlated. The aim our study was to determine the severity of pancreatitis with SIRS score at the time of admission.Materials and Methods: We conducted prospective cohort study of consecutive patient admitted to emergency of KMCTH, with diagnosis of Acute Pancreatitis (AP) from December 2014 to January 2016. Clinical, biochemical and imaging data from the patients were collected to diagnose pancreatitis. Acute Pancreatitis was diagnosed as per Revised Atlanta Classification 2012. SIRS was evaluated at the time of admission and was correlated with Modified Marshall scoring system for organ dysfunction and sensitivity, specificity and predictive value of SIRS score at admission for organ failure was calculated.Results: Among 41 patients admitted with diagnosis of Acute pancreatitis irrespective of cause the sensitivity of SIRS score at admission in predicting Severe pancreatitis was 28 %, specificity was 80%, Positive predictive value was 60 % and NPV was 51 %, with P value of 0.52 and odds ratio of 1.6 ( CI- 0.376-6.808).Conclusion: This study showed that SIRS score at admission is not sensitive in predicting severe pancreatitis however it is specific for severe pancreatitis.
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Joshi MR, Bohara TP, Rupakheti S, Parajuli A, Shrestha DK, Karki D, Laudari U. Pre-operative Prediction of Difficult Laparoscopic Cholecystectomy. JNMA J Nepal Med Assoc 2015; 53:221-226. [PMID: 27746459] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 06/06/2023] Open
Abstract
INTRODUCTION Laparoscopic cholecystectomy is one of the most common operation performed. Though LC have become safer and easier at times it can be difficult. Difficult cases can result in prolonged operative time, bleeding, bile spillage, conversion to open technique and bile duct injury resulting in unplanned prolonged hospital stay, increase in estimated cost to the patients and for the surgeon it leads to increased stress during operation and time pressure to complete the operative list. . Identification of difficult cases has potential advantages for surgeons, patients and their relatives. We aim to develop and validate a scoring system to predict difficult LC preoperatively. METHODS Prospective study. History, physical examination, abdominal ultrasound and biochemical parameters were included to develop a scoring system. Hundred patients undergoing LC were included and preoperative scores were calculated preoperatively to predict difficult LC which was compared with operative assessment. RESULTS Sensitivity and specificity of the preoperative scoring for difficult case was 53.8 % and 89.2 % respectively with PPV of 63.64 % and NPV of 84.62%. Only three parameters (history of acute cholecystitis, gall bladder wall thickness and contracted gall bladder) were statistically significant to predict difficult LC individually. Area under ROC curve was 0.779 (95 % CI, 0.657-0.883). CONCLUSIONS Preoperative scoring system can be used to predict difficult LC. Surgeons can plan operation based on predicted difficulty. Patients and relatives can be counselled preoperatively for the possibility of difficult operation, prolonged hospital stay and increased cost in predicted difficult case.
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Affiliation(s)
- M R Joshi
- Department of Surgery, Kathmandu Medical College Teaching Hospital, Kathmandu, Nepal
| | - T P Bohara
- Department of Surgery, Kathmandu Medical College Teaching Hospital, Kathmandu, Nepal
| | - S Rupakheti
- Department of Surgery, Kathmandu Medical College Teaching Hospital, Kathmandu, Nepal
| | - A Parajuli
- Department of Surgery, Kathmandu Medical College Teaching Hospital, Kathmandu, Nepal
| | - D K Shrestha
- Department of Surgery, Lumbini Medical College and Teaching Hospital, Palpa, Nepal
| | - D Karki
- Department of Surgery, Kathmandu Medical College Teaching Hospital, Kathmandu, Nepal
| | - U Laudari
- Department of Surgery, Kathmandu Medical College Teaching Hospital, Kathmandu, Nepal
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Fernandez-Leon JA, Parajuli A, Franklin R, Sorenson M, Felleman DJ, Hansen BJ, Hu M, Dragoi V. A wireless transmission neural interface system for unconstrained non-human primates. J Neural Eng 2015; 12:056005. [PMID: 26269496 DOI: 10.1088/1741-2560/12/5/056005] [Citation(s) in RCA: 17] [Impact Index Per Article: 1.9] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/11/2022]
Abstract
OBJECTIVE Studying the brain in large animal models in a restrained laboratory rig severely limits our capacity to examine brain circuits in experimental and clinical applications. APPROACH To overcome these limitations, we developed a high-fidelity 96-channel wireless system to record extracellular spikes and local field potentials from the neocortex. A removable, external case of the wireless device is attached to a titanium pedestal placed in the animal skull. Broadband neural signals are amplified, multiplexed, and continuously transmitted as TCP/IP data at a sustained rate of 24 Mbps. A Xilinx Spartan 6 FPGA assembles the digital signals into serial data frames for transmission at 20 kHz though an 802.11n wireless data link on a frequency-shift key-modulated signal at 5.7-5.8 GHz to a receiver up to 10 m away. The system is powered by two CR123A, 3 V batteries for 2 h of operation. MAIN RESULTS We implanted a multi-electrode array in visual area V4 of one anesthetized monkey (Macaca fascicularis) and in the dorsolateral prefrontal cortex (dlPFC) of a freely moving monkey (Macaca mulatta). The implanted recording arrays were electrically stable and delivered broadband neural data over a year of testing. For the first time, we compared dlPFC neuronal responses to the same set of stimuli (food reward) in restrained and freely moving conditions. Although we did not find differences in neuronal responses as a function of reward type in the restrained and unrestrained conditions, there were significant differences in correlated activity. This demonstrates that measuring neural responses in freely moving animals can capture phenomena that are absent in the traditional head-fixed paradigm. SIGNIFICANCE We implemented a wireless neural interface for multi-electrode recordings in freely moving non-human primates, which can potentially move systems neuroscience to a new direction by allowing one to record neural signals while animals interact with their environment.
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Affiliation(s)
- Jose A Fernandez-Leon
- Department of Neurobiology and Anatomy, University of Texas-Houston Medical School, 6431 Fannin St., Houston, TX 77030, USA. Centre for Computational Neuroscience and Robotics, University of Sussex, Brighton BN1 9QG, UK
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11
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Parajuli A, Eriksson A, Felleman DJ. Mutual information of local field potentials distinguishes area-V2 stripe compartments. Eye Brain 2014; 6:75-95. [PMID: 28539789 PMCID: PMC5417747 DOI: 10.2147/eb.s51820] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/23/2022] Open
Abstract
PURPOSE Determining how information is represented by populations of neurons in different cortical areas is critical to our understanding of the brain mechanisms of visual perception. Recently, information-theoretical approaches have been applied to the analysis of spike trains of multiple neurons. However, other neurophysiological signals, such as local field potentials (LFPs), offer a different source of information worthy of investigating in this way. In this study, we investigate how the modular organization of area V2 of macaque monkeys impacts the information represented in LFPs. MATERIALS AND METHODS LFPs were recorded from a 32-channel microelectrode array implanted in area V2 of an anesthetized macaque monkey. The electrode positions were recovered in histological tissue stained for cytochrome oxidase (CO) to reveal the modular organization of V2. Visual stimuli consisted of a variety of moving gratings that differed in orientation, direction, spatial frequency, and chromatic content. RESULTS LFPs were separated into different frequency bands for analysis of mutual information as a function of stimulus type and CO-stripe location. High-γ-band LFPs revealed the highest information content across the electrode array. The distributions of total mutual information as well as mutual information due to correlations varied greatly by CO stripe. This analysis indicates that local correlations within each CO stripe generally reduce mutual information, whereas correlations between stripes greatly increase mutual information. CONCLUSION The decomposition mutual information based on the power of different frequency bands of LFPs provides new insight into the impact of modular architecture on population coding in area V2. Unlike other cortical areas, such as V1, where mutual information based on LFP correlations is largely determined by cortical separation, mutual information in V2 is also fundamentally determined by the CO-stripe architecture.
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Affiliation(s)
- Arun Parajuli
- Department of Neurobiology and Anatomy, University of Texas Medical School at Houston, Houston, TX, USA
| | - Anastasia Eriksson
- Department of Neurobiology and Anatomy, University of Texas Medical School at Houston, Houston, TX, USA
| | - Daniel J Felleman
- Department of Neurobiology and Anatomy, University of Texas Medical School at Houston, Houston, TX, USA
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12
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Abstract
Area V2 of macaque monkeys is traditionally thought to consist of 3 distinct functional compartments with characteristic cortical connections and functional properties. Orientation selectivity is one property that has frequently been used to distinguish V2 stripes, however, this receptive field property has been found in a high percentage of neurons across V2 compartments. Using quantitative intrinsic cortical imaging, we derived maps of preferred orientation, orientation selectivity, and orientation gradient in thin stripes, thick stripes, and interstripes in area V2. Orientation-selective responses were found in each V2 stripe, but the magnitude and organization of orientation selectivity differed significantly from stripe to stripe. Remarkably, the 2 pale stripes flanking each cytochrome oxidase dense stripe differed significantly in their representation of orientation resulting in their distinction as type-I and type-II interstripes. V2 orientation maps are characterized by clockwise and anticlockwise "orientation pinwheels", but unlike V1, they are not homogeneously distributed across V2. Furthermore, V2 stripes contain large-scale sequences of preferred orientation. These analyses demonstrate that V2 consists of 4 distinct functional compartments; thick stripes and type-II interstripes, which are strongly orientation selective and thin stripes and type-I interstripes, which are significantly less selective for orientation and exhibit larger orientation gradient magnitudes.
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Affiliation(s)
- Daniel J Felleman
- Department of Neurobiology and Anatomy, University of Texas Medical School-Houston, Houston, TX 77030, USA
| | - Heejin Lim
- Department of Neurobiology and Anatomy, University of Texas Medical School-Houston, Houston, TX 77030, USA Department of Computer Science, Prairie View A&M University, Prairie View, TX, USA
| | - Youping Xiao
- Department of Neurobiology and Anatomy, University of Texas Medical School-Houston, Houston, TX 77030, USA Departments of Ophthalmology, Physiology and Pharmacology, and the SUNY Eye Institute, State University of New York Downstate Medical Center, Brooklyn, NY, USA
| | - Yi Wang
- Department of Neurobiology and Anatomy, University of Texas Medical School-Houston, Houston, TX 77030, USA State Key Laboratory of Brain and Cognitive Sciences, Institute of Biophysics, Chinese Academy of Sciences, Beijing 100101, China
| | - Anastasia Eriksson
- Department of Neurobiology and Anatomy, University of Texas Medical School-Houston, Houston, TX 77030, USA
| | - Arun Parajuli
- Department of Neurobiology and Anatomy, University of Texas Medical School-Houston, Houston, TX 77030, USA
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Bohara TP, Parajuli A, Bajracharya GR, Joshi MR. Prevalence of pancreaticobiliary reflux in symptomatic cholelithiasis and its significance. J Coll Med Sci-Nepal 2014. [DOI: 10.3126/jcmsn.v9i1.9666] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/18/2022] Open
Abstract
Aims: Pancreaticobiliary reflux (PBR) is reflux of pancreatic enzymes into the biliary tree which occurs as a result of an anamoly of pancreaticobiliary junction (PBJ) or functionally impaired sphincter. PBR is associated with changes in biliary epithelium and is known to cause benign and malignant biliary pathology. Various authors have reported prevalence of PBR in patients with normal PBJ ranging from 20 % to 83.5 %. With aim to detect the prevalence of PBR in patients with symptomatic cholelithiasis in Nepalese population we conducted this study. Materials and methods: Thirty patients undergoing elective laparoscopic cholecystectomy (LC) for symptomatic cholelithiasis were included in the study. History, physical findings and relevant investigations including liver function test, serum amylase and abdominal ultrasound were recorded. Bile sample for amylase was taken from gall bladder during LC percuatneously before manipulation of calot’s triangle and common bile duct. Bile amylase level above serum amylase level was considered positive for PBR. Results: Mean age of the patient was 37.27 (± 14.41) years. Out of 30, 6 (20 %) patients were male and 24 (80 %) were female. Mean BMI was 21.58 (± 3.2). PBR reflux was present in 66.7 % of patients out of which 2 were male and 18 were female that was not statistically significant (p = 1.41) when compared with patients without PBR. Conclusion: PBR occurs in patient with cholelithiasis and has role in pathogenesis of gallstones disease and gall bladder carcinoma. Long term surveillance would be required to ascertain the significance of detection of PBR after LC. Journal of College of Medical Sciences-Nepal, 2013, Vol-9, No-1, 1-6 DOI: http://dx.doi.org/10.3126/jcmsn.v9i1.9666
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