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Vergara D, Sagüés F, Späth EJ, Lloberas MM, Saumell CA, Moreno FC. Eficacia antiparasitaria in vitro del extracto de quebracho (Schinopsis balansae) sobre larvas infectantes de Haemonchus contortus de ovinos. Rev Med Vet Zoot 2021. [DOI: 10.15446/rfmvz.v68n3.99899] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/09/2022] Open
Abstract
El objetivo fue evaluar in vitro la eficacia del extracto de quebracho (Bioquina®), rico en taninos condensados, en el control de H. contortus de ovinos, dadas las evidencias de que los taninos condensados provenientes del extracto de quebracho (Schinopsis spp.) pueden reducir la excreción de huevos, la fecundidad de las hembras parásitas y la carga de parásitos nematodos gastrointestinales adultos en rumiantes. Se utilizó el test de inhibición de migración larval (IML) a 3 concentraciones diferentes (5 mg/ml, 15 mg/ml y 30 mg/ml) sobre larvas infectantes de H. contortus susceptibles a todos los grupos químicos. El efecto se analizó mediante un análisis de varianza y para la estimación de las diferencias entre grupos (a posteriori) se usó la prueba LSD Fisher.
El test in vitro demostró que el extracto de quebracho evaluado redujo aproximadamente entre un 74% y un 80% la migración larval a las concentraciones de entre 5 mg/ml y 30 mg/ml. Del análisis de varianza surgen diferencias significativas entre tratamientos (p = 0,0494). Al realizar la prueba de comparación de medias se evidenciaron diferencias significativas (p < 0,05) entre los promedios de migración a las diluciones de 5 mg/ml y 15 mg/ml y de 5 mg/ml y 30 mg/ml, mientras que no se detectaron diferencias significativas entre la dilución de 15 mg/ml y 30 mg/ml. Estos resultados señalaron que el extracto de quebracho, a las diluciones evaluadas, presentó actividad antihelmíntica sobre larvas L3 susceptibles de H. contortus; sin embargo, se requiere ampliar los estudios in vivo en ovinos.
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Kovalchuk I, Pellino M, Rigault P, van Velzen R, Ebersbach J, Ashnest JR, Mau M, Schranz ME, Alcorn J, Laprairie RB, McKay JK, Burbridge C, Schneider D, Vergara D, Kane NC, Sharbel TF. The Genomics of Cannabis and Its Close Relatives. Annu Rev Plant Biol 2020; 71:713-739. [PMID: 32155342 DOI: 10.1146/annurev-arplant-081519-040203] [Citation(s) in RCA: 56] [Impact Index Per Article: 14.0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/22/2023]
Abstract
Cannabis sativa L. is an important yet controversial plant with a long history of recreational, medicinal, industrial, and agricultural use, and together with its sister genus Humulus, it represents a group of plants with a myriad of academic, agricultural, pharmaceutical, industrial, and social interests. We have performed a meta-analysis of pooled published genomics data, andwe present a comprehensive literature review on the evolutionary history of Cannabis and Humulus, including medicinal and industrial applications. We demonstrate that current Cannabis genome assemblies are incomplete, with ∼10% missing, 10-25% unmapped, and 45S and 5S ribosomal DNA clusters as well as centromeres/satellite sequences not represented. These assemblies are also ordered at a low resolution, and their consensus quality clouds the accurate annotation of complete, partial, and pseudogenized gene copies. Considering the importance of genomics in the development of any crop, this analysis underlines the need for a coordinated effort to quantify the genetic and biochemical diversity of this species.
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Affiliation(s)
- I Kovalchuk
- Department of Biology, University of Lethbridge, Lethbridge, Alberta T1K 3M4, Canada
| | - M Pellino
- College of Agriculture and Bioresources, University of Saskatchewan, Saskatoon, Saskatchewan S7N 4J8, Canada;
| | - P Rigault
- Gydle Inc., Québec, Québec G1S 1E7, Canada
- Center for Organismal Studies (COS), University of Heidelberg, 69120 Heidelberg, Germany
| | - R van Velzen
- Biosystematics Group, Wageningen University, 6703 BD Wageningen, The Netherlands
- Bedrocan International, 9640 CA Veendam, The Netherlands
| | - J Ebersbach
- Saskatoon Research and Development Centre, Agriculture and Agri-Food Canada, Saskatoon, Saskatchewan S7N 0X2, Canada
| | - J R Ashnest
- College of Agriculture and Bioresources, University of Saskatchewan, Saskatoon, Saskatchewan S7N 4J8, Canada;
| | - M Mau
- College of Agriculture and Bioresources, University of Saskatchewan, Saskatoon, Saskatchewan S7N 4J8, Canada;
| | - M E Schranz
- Biosystematics Group, Wageningen University, 6703 BD Wageningen, The Netherlands
| | - J Alcorn
- College of Pharmacy and Nutrition, University of Saskatchewan, Saskatoon, Saskatchewan S7N 5E5, Canada
| | - R B Laprairie
- College of Pharmacy and Nutrition, University of Saskatchewan, Saskatoon, Saskatchewan S7N 5E5, Canada
- Department of Pharmacology, College of Medicine, Dalhousie University, Halifax, Nova Scotia B3H 4R2, Canada
| | - J K McKay
- College of Agricultural Sciences, Colorado State University, Fort Collins, Colorado 80523, USA
| | - C Burbridge
- School of Environment and Sustainability, University of Saskatchewan, Saskatoon, Saskatchewan S7N 5E5, Canada
| | - D Schneider
- School of Environment and Sustainability, University of Saskatchewan, Saskatoon, Saskatchewan S7N 5E5, Canada
| | - D Vergara
- Department of Ecology and Evolutionary Biology, University of Colorado, Boulder, Colorado 80309, USA
| | - N C Kane
- Department of Ecology and Evolutionary Biology, University of Colorado, Boulder, Colorado 80309, USA
| | - T F Sharbel
- College of Agriculture and Bioresources, University of Saskatchewan, Saskatoon, Saskatchewan S7N 4J8, Canada;
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Maffia M, Vergara D, Romano A, Corricciati C, Damato M, Frank J, Fournier I, Salzet M, Quattrini A. Spatio-temporal analysis of rat peripheral nerve regeneration. J Biotechnol 2019. [DOI: 10.1016/j.jbiotec.2019.05.025] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
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Vergara D, Simeone P, De Matteis S, Carloni S, Lanuti P, Marchisio M, Miscia S, Rizzello A, Napolitano R, Agostinelli C, Maffia M. Comparative proteomic profiling of Hodgkin lymphoma cell lines. Mol Biosyst 2016; 12:219-32. [PMID: 26588820 DOI: 10.1039/c5mb00654f] [Citation(s) in RCA: 10] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 12/15/2022]
Abstract
Classical Hodgkin lymphoma (cHL) is a malignancy with complex pathogenesis. The hallmark of the disease is the presence of large mononucleated Hodgkin and bi- or multinucleated Reed/Sternberg (H/RS) cells. The origin of HRS cells in cHL is controversial as these cells show the coexpression of markers of several lineages. Using a proteomic approach, we compared the protein expression profile of cHL models of T- and B-cell derivation to find proteins differentially expressed in these cell lines. A total of 67 proteins were found differentially expressed between the two cell lines including metabolic proteins and proteins involved in the regulation of the cytoskeleton and/or cell migration, which were further validated by western blotting. Additionally, the expression of selected B- and T-cell antigens was also assessed by flow cytometry to reveal significant differences in the expression of different surface markers. Bioinformatics analysis was then applied to our dataset to find enriched pathways and networks, and to identify possible key regulators. In the present study, a proteomic approach was used to compare the protein expression profiles of two cHL cell lines. The identified proteins and/or networks, many of which not previously related to cHL, may be important to better define the pathogenesis of the disease, to identify novel diagnostic markers, and to design new therapeutic strategies.
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Affiliation(s)
- D Vergara
- Department of Biological and Environmental Sciences and Technologies, University of Salento, via Monteroni, 73100 Lecce, Italy. and Laboratory of Clinical Proteomic, "Giovanni Paolo II" Hospital, ASL-Lecce, Italy.
| | - P Simeone
- Department of Medicine and Aging Science, School of Medicine and Health Science and Unit of Cytomorphology, Research Centre on Aging (Ce.S.I), University "G. d'Annunzio" of Chieti-Pescara, 66100 Chieti, Italy
| | - S De Matteis
- Biosciences Laboratory, Istituto Scientifico Romagnolo per lo Studio e la Cura dei Tumori (IRST) IRCCS, 47014 Meldola, Italy
| | - S Carloni
- Biosciences Laboratory, Istituto Scientifico Romagnolo per lo Studio e la Cura dei Tumori (IRST) IRCCS, 47014 Meldola, Italy
| | - P Lanuti
- Department of Medicine and Aging Science, School of Medicine and Health Science and Unit of Cytomorphology, Research Centre on Aging (Ce.S.I), University "G. d'Annunzio" of Chieti-Pescara, 66100 Chieti, Italy
| | - M Marchisio
- Department of Medicine and Aging Science, School of Medicine and Health Science and Unit of Cytomorphology, Research Centre on Aging (Ce.S.I), University "G. d'Annunzio" of Chieti-Pescara, 66100 Chieti, Italy
| | - S Miscia
- Department of Medicine and Aging Science, School of Medicine and Health Science and Unit of Cytomorphology, Research Centre on Aging (Ce.S.I), University "G. d'Annunzio" of Chieti-Pescara, 66100 Chieti, Italy
| | - A Rizzello
- Department of Biological and Environmental Sciences and Technologies, University of Salento, via Monteroni, 73100 Lecce, Italy. and Laboratory of Clinical Proteomic, "Giovanni Paolo II" Hospital, ASL-Lecce, Italy.
| | - R Napolitano
- Biosciences Laboratory, Istituto Scientifico Romagnolo per lo Studio e la Cura dei Tumori (IRST) IRCCS, 47014 Meldola, Italy
| | - C Agostinelli
- Department of Experimental, Hematopathology and Hematology Sections, Diagnostic and Specialty Medicine, S. Orsola-Malpighi Hospital, University of Bologna, Bologna, Italy
| | - M Maffia
- Department of Biological and Environmental Sciences and Technologies, University of Salento, via Monteroni, 73100 Lecce, Italy. and Laboratory of Clinical Proteomic, "Giovanni Paolo II" Hospital, ASL-Lecce, Italy.
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Troncoso M, Santander P, Balut F, Barrios A, Faure F, Vergara D, Troncoso L, Rojas M, Galleguillos C. Clinical phenotype, genetic and imaging features in vanishing white matter disease/cach. J Neurol Sci 2015. [DOI: 10.1016/j.jns.2015.09.072] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/22/2022]
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Abstract
Under the Red Queen hypothesis, outcrossing can produce genetically variable progeny, which may be more resistant, on average, to locally adapted parasites. Mating with multiple partners may enhance this resistance by further increasing the genetic variation among offspring. We exposed Potamopyrgus antipodarum to the eggs of a sterilizing, trematode parasite and tested whether this altered mating behaviour. We found that exposure to parasites increased the number of snail mating pairs and the total number of different mating partners for both males and females. Thus, our results suggest that, in host populations under parasite-mediated selection, exposure to infective propagules increases the rate of mating and the number of mates.
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Affiliation(s)
- D M Soper
- Department of Biology, Indiana University, , Bloomington, IN, USA
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Vergara D, Tinelli A, Iannone A, Maffia M. The impact of proteomics in the understanding of the molecular basis of Paclitaxel-resistance in ovarian tumors. Curr Cancer Drug Targets 2013; 12:987-97. [PMID: 22515523 DOI: 10.2174/156800912803251171] [Citation(s) in RCA: 15] [Impact Index Per Article: 1.4] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/05/2011] [Revised: 09/27/2011] [Accepted: 03/24/2012] [Indexed: 11/22/2022]
Abstract
The current therapy for ovarian cancer has advanced from alkylating agents, to a combination of carboplatinum and paclitaxel offering increased survival. Although most patients respond to this first-line therapy, initially, the majority of these patients relapse within 2 years. The mechanisms responsible for acquired drug resistance in ovarian cancer have been elucidated only in part. They include i) enhanced drug export, ii) activation/inhibition of intracellular signalling pathways, iii) molecular alterations in tubulin isotype composition. A better understanding of these mechanisms is needed, in order to develop new approaches, aimed at overcoming resistance to anticancer agents, and to reveal the complexity of causes, which contribute to drug resistance. In this review we offer an updated overview of proteomic studies on the molecular mechanisms of paclitaxel resistance. These proteomic studies also identify potential targets for modulating drug resistance, that could be predictive of response to chemotherapy in ovarian carcinomas.
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Affiliation(s)
- D Vergara
- Laboratory of General Physiology, Department of Biological and Environmental Sciences and Technologies, University of Salento, via Monteroni 73100, Lecce, Italy
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Vergara D, Shang C, Schramm A, McPhillips P, Ouhib Z. SU-E-J-180: A Characterization of the LAP Aquarius Phantom for External LAP Laser Alignment and MR Geometric Distortion Verification for the use of SRS Patient Simulation. Med Phys 2012; 39:3694. [PMID: 28518943 DOI: 10.1118/1.4735021] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/07/2022] Open
Abstract
PURPOSE To explore additional application of the new Aquarius external laser alignment verification Phantom by LAP (Aq-LAP Phantom) examining geometric accuracy of magnetic resonance images (MRI) commonly used for planning intracranial stereotactic radiation surgery (ICSRS) cases. METHODS Newly designed external patient alignment lasers were first aligned by the Aq-LAP Phantom at a Siemens Magneton Vario 3T MR unit. The scans were then performed with the T1 Axial 3D MPRAGE protocols with 0.9 mm temporal resolution, which may be used for ICSRS. They also include FLAIR, T2 BLADE and Diffusion Axial TRACE imaging acquisitions with 1 mm temporal resolution. The MRI will be fused to 1 mm cut computerized tomography (CT) images acquired by a Siemens Somatom Sensation Open©. The geometric distortions (GD) were measured against the CT in all axial, sagital, and coronal directions at different levels. RESULTS MR images of the Aquarius Phantom indicate a distinct similarity between the nonlinear GD along the z-axis crosshair and typical magnetic field gradient nonlinearity. There is linear correlation between MR divergence datasets of distorted crosshairs (p-values from 0.57 to 0.00), and nonlinear correlation between MR divergence datasets of the distorted crosshair with the CT divergence datasets of the cross plane (p-values from 8.45×10̂-4 to 1.38×10̂-46). The margin of error exceeded no more than 0.29 mm. GDs up to about 2 mm are observed at the distal regions of the longitudinal axis in the SRS treatment planning MR images. CONCLUSIONS Using the Aquarius Phantom, one is able to detect GD in ICSRS planning MRI acquisitions, and align the external LAP patient alignment lasers by following the LAP QA. Based on the results, one may recommend using the Aquarius Phantom to determine if margins should be included for SRS treatment planning. The Aquarius Phantom, used for laser alignment and geometric distortion detection, was provided by LAP of America.
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Affiliation(s)
- D Vergara
- Florida Atlantic University, Boca Raton, Florida.,Boca Raton Regional Hospital, Boca Raton, FL.,Lynn Regional Cancer Center, Delray Beach, FL
| | - C Shang
- Florida Atlantic University, Boca Raton, Florida.,Boca Raton Regional Hospital, Boca Raton, FL.,Lynn Regional Cancer Center, Delray Beach, FL
| | - A Schramm
- Florida Atlantic University, Boca Raton, Florida.,Boca Raton Regional Hospital, Boca Raton, FL.,Lynn Regional Cancer Center, Delray Beach, FL
| | - P McPhillips
- Florida Atlantic University, Boca Raton, Florida.,Boca Raton Regional Hospital, Boca Raton, FL.,Lynn Regional Cancer Center, Delray Beach, FL
| | - Z Ouhib
- Florida Atlantic University, Boca Raton, Florida.,Boca Raton Regional Hospital, Boca Raton, FL.,Lynn Regional Cancer Center, Delray Beach, FL
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Vergara D, Tinelli A, Martignago R, Malvasi A, Chiuri V, Leo G. Biomolecular Pathogenesis of Borderline Ovarian Tumors: Focusing Target Discovery Through Proteogenomics. Curr Cancer Drug Targets 2010; 10:107-16. [DOI: 10.2174/156800910790980269] [Citation(s) in RCA: 13] [Impact Index Per Article: 0.9] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/14/2009] [Accepted: 09/17/2009] [Indexed: 11/22/2022]
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De Masi R, Vergara D, Pasca S, Acierno R, Greco M, Spagnolo L, Blasi E, Sanapo F, Trianni G, Maffia M. PBMCs protein expression profile in relapsing IFN-treated multiple sclerosis: A pilot study on relation to clinical findings and brain atrophy. J Neuroimmunol 2009; 210:80-6. [PMID: 19329191 DOI: 10.1016/j.jneuroim.2009.03.002] [Citation(s) in RCA: 21] [Impact Index Per Article: 1.4] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/24/2008] [Revised: 01/20/2009] [Accepted: 03/04/2009] [Indexed: 11/29/2022]
Abstract
This cross-sectional study investigated with two-dimensional gel electrophoresis coupled to MALDI-TOF and MRI the relationship between PBMCs protein expression profile and whole-brain atrophy in 16 unselected RR-MS IFN-treated patients compared with 6 RR IFN-untreated and 12 matched healthy control subjects. Grey/white matter fraction, T1/T2 lesion load and clinical variables were considered too. Twenty six proteins showed significant differential expression among RR IFN-treated patients and control samples. Four of these (IN35, GANAB, PP1B, SEPT2) resulted correlated with clinical and MRI findings in RR IFN-treated MS patients. Future clinical applications remain to be validated by other techniques and confirmed by a larger study.
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Affiliation(s)
- R De Masi
- Department of Biological and Environmental Sciences and Technologies, University of Salento, Lecce, Italy
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Leo G, Pisanò M, Pitotti E, Ciannamea B, Megha M, Spedicato S, Storelli F, Vergara D, Moschettini G, Tinelli A. LA TM-REAL TIME SYBR GREEN PCR PER LA DISCRIMINAZIONE RAPIDA DEI GENOTIPI HPV A BASSO RISCHIO. Microbiol Med 2006. [DOI: 10.4081/mm.2006.3369] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/23/2022] Open
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Leo G, Pisanò M, Ciannamea B, Pitotti E, Castellano S, Vergara D, Megha M, Moschettini G, Mighali P, Maffia M. ROLE OF SEQUENCING DNA IN THE HUMAN PAPILLOMAVIRUS TYPING. DIAGNOSTIC AND PROGNOSTIC PERSPECTIVES. Microbiol Med 2005. [DOI: 10.4081/mm.2005.3575] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/23/2022] Open
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Abstract
Previous research has shown that Amer -Ind signals are more easily learned and remembered than their synonyms in American Sign Language. One possible reason is a difference in motoric complexity between the two systems. To test the hypothesis that such a difference exists, the positions and movements that constitute the 236 signals of Amer -Ind Code were compared with those of their synonyms in American Sign Language. It was found that the ASL signs were indeed more complex in terms of changes of hand orientation during production, the use of two hands rather than one, the number of different handshapes used, and the total amount of movement required. When the two systems were compared in terms of the normal development of finger, hand, and arm movements, it was found that more Amer -Ind signals than ASL signs are within the competence of infants at both the 6-month and 12-month levels. Relative to the motor coordination required to execute both systems, it was concluded that the Amer -Ind corpus is less complex than a matched group of ASL signs.
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